Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0005813

Physical Location & Seq

Genomic Coordinates Forward (+)

17007629 .. 17009278

Gene Structure 1650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G162500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGCAATTGGACCAGCAAGACAAGATGATCAATTATGACTCTCCACCAATAATTCAATCAAATGGGCGACCCACCAAGATAAAGCTTGCTCCTATTTACAGCCAGAAAAAGGCAGAAGAGGAGGAAGAAGAAGAAGATAGAATCCGTTCTGCTTCTTCGTTTTTCATATTGGAGATGGGTTCTCATGTCTCTAAGCAGGTAGAACGGCGAAAGGCGATTTCGACGGAGAAGAAAACTCTATGTGCTCTTCATCAAAACTGTGGTGAGGAGTTTCCAGGCTGTGACTACAAGCCTTCAGACAGGAAAAACTGGATGGCTGGCATCAACCCTGAGAAAGTTCATATAAACAAGATCGTATGGCCAGGAACACATGACTCTGCAACCAACAAGATTGGATTTCCAGCCATCACTAGGCCTTTTGCTCAATGCCAATCTTTGTCCATCTACCAGCAGCTTGTGAAAGGCACCAGAGTTCTTGATATTCGAATTCAGGAGGATCGCCGCGTCTGCCACGGGATTCTCCTCACTTACAGCATAGATGTTGTGATCAATGATGTCAAGAAGTTTCTATCCGAAACACAGTCTGAGATCATAATCCTTGAAATCAGGACTGAGTTTGGACATGAAGACCCTCCGGACTTTGACAAGTACTTGGTGGATCAACTTGGAGAGTTTTTGATCCATCAGGATGAGCATGTCTTTAACAAGACAATCGCGGAATTGCTGCCAAGGAGAGTGATATGTGTGTGGAAGCCGAGGAAGTCACCTCAGGCCAAGGCAGGGAGCCCTCTGTGGAATGCAGGGCACTTGAAGGATAACTGGATCGACACGGATTTGCCATCCACGAAGTTCGAAAGCAATCTGAAGTATTTGAGTGAGCAGCCACCAGTTTCAACAAGGAAATTCTTTTACAGGGTGGAGAACACAGTGACACCTCAGGCTGATAACCCGGTTTTATGTGTGAAACCTGTGACCGGTCGGATTCATGGATTCGCAAGGTTGTTCATAACTCAGTGCTTCTCTAAAGGTGTTGCAGACAGACTGCAAATCATCTCCACGGATTTTATAGACGAAGATTTCGTCGATGCATGTGTTGCAGCTACATATGCAAGAATTGAAGGAAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PI-PLC-X

Protein Analysis

377

Amino Acids

42.97

Weight (kDa)

6.57

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005813)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38690
fragaria_vesca	FvH4_2g02060 FvH4_4g21970 FvH4_4g21970
malus_domestica	MD05G1115500.v1.1 MD05G1118000.v1.1 MD10G1118000.v1.1 MD10G1121000.v1.1
prunus_persica	Prupe.8G160300_v2.0.a1 Prupe.8G162500_v2.0.a1
pyrus_communis	pycom05g10990
rosa_chinensis	RchiOBHm_Chr6g0244491 RchiOBHm_Chr6g0245281
rosa_laevigata	RLG00000008494 RLG00000015311 RLG00000015354
rosa_rugosa	Rorug05G0509200 Rorug05G0513300
rosa_samantha	Rh6AG024500 Rh6AG028700 Rh6BG019500 Rh6BG024800 Rh6CG017100 Rh6CG022900 Rh6DG018100 Rh6DG022900
rosa_wichuraiana	Rw6G001980 Rw6G002410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	187
AccB1I	GGYRCC	1 cut(s)	464
AccII	CGCG	2 cut(s)	504, 716
AccIII	TCCGGA	1 cut(s)	634
AciI	CCGC	2 cut(s)	502, 716
AclWI	GGATC	4 cut(s)	504, 666, 673, 830
AcoI	YGGCCR	1 cut(s)	359
AcsI	RAATTY	2 cut(s)	486, 902
AcuI	CTGAAG	2 cut(s)	279, 884
AfaI	GTAC	1 cut(s)	650
AfiI	CCNNNNNNNGG	4 cut(s)	109, 411, 780, 974
AgeI	ACCGGT	1 cut(s)	974
AgsI	TTSAA	5 cut(s)	56, 602, 811, 894, 1118
AjnI	CCWGG	2 cut(s)	274, 361
AluBI	AGCT	3 cut(s)	85, 454, 1100
AluI	AGCT	3 cut(s)	85, 454, 1100
Alw21I	GWGCWC	1 cut(s)	247
Alw26I	GTCTC	1 cut(s)	193
AlwI	GGATC	4 cut(s)	504, 666, 673, 830
Aor13HI	TCCGGA	1 cut(s)	634
AoxI	GGCC	3 cut(s)	359, 413, 771
ApeKI	GCWGC	4 cut(s)	451, 724, 880, 1097
ApoI	RAATTY	2 cut(s)	486, 902
ArsI	GACNNNNNNTTYG	4 cut(s)	1061, 1065, 1093, 1097
AsiGI	ACCGGT	1 cut(s)	974
Asp700I	GAANNNNTTC	1 cut(s)	145
AspS9I	GGNCC	1 cut(s)	10
AsuC2I	CCSGG	1 cut(s)	950
AsuHPI	GGTGA	2 cut(s)	275, 756
AsuII	TTCGAA	2 cut(s)	484, 852
AvaII	GGWCC	1 cut(s)	10
AxyI	CCTNAGG	2 cut(s)	768, 936
BaeGI	GKGCMC	1 cut(s)	807
BalI	TGGCCA	1 cut(s)	361
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	1 cut(s)	788
BbsI	GAAGAC	1 cut(s)	633
Bbv12I	GWGCWC	1 cut(s)	247
BbvI	GCAGC	4 cut(s)	463, 711, 892, 1109
BccI	CCATC	6 cut(s)	169, 307, 413, 449, 690, 847
BceAI	ACGGC	1 cut(s)	221
BciT130I	CCWGG	2 cut(s)	276, 363
BclI	TGATCA	2 cut(s)	27, 546
BcnI	CCSGG	1 cut(s)	950
BcoDI	GTCTC	1 cut(s)	193
BfaI	CTAG	1 cut(s)	411
BfuAI	ACCTGC	1 cut(s)	187
BisI	GCNGC	5 cut(s)	452, 502, 725, 881, 1098
BlsI	GCNGC	5 cut(s)	453, 503, 726, 882, 1099
BmcAI	AGTACT	1 cut(s)	650
Bme1390I	CCNGG	3 cut(s)	276, 363, 950
Bme18I	GGWCC	1 cut(s)	10
BmgT120I	GGNCC	1 cut(s)	10
BmiI	GGNNCC	2 cut(s)	466, 785
BmrFI	CCNGG	3 cut(s)	276, 363, 950
BmsI	GCATC	2 cut(s)	330, 1075
BpiI	GAAGAC	1 cut(s)	633
Bpu14I	TTCGAA	2 cut(s)	484, 852
BpuMI	CCSGG	1 cut(s)	950
BsaBI	GATNNNNATC	1 cut(s)	593
BsaJI	CCNNGG	5 cut(s)	511, 728, 755, 774, 1056
BsaWI	WCCGGW	2 cut(s)	634, 974
Bsc4I	CCNNNNNNNGG	4 cut(s)	109, 411, 780, 974
Bse118I	RCCGGY	1 cut(s)	974
Bse1I	ACTGG	3 cut(s)	314, 824, 887
Bse21I	CCTNAGG	2 cut(s)	768, 936
Bse8I	GATNNNNATC	1 cut(s)	593
BseAI	TCCGGA	1 cut(s)	634
BseBI	CCWGG	2 cut(s)	276, 363
BseDI	CCNNGG	5 cut(s)	511, 728, 755, 774, 1056
BseGI	GGATG	3 cut(s)	318, 694, 839
BseJI	GATNNNNATC	1 cut(s)	593
BseLI	CCNNNNNNNGG	4 cut(s)	109, 411, 780, 974
BseMII	CTCAG	6 cut(s)	321, 576, 603, 782, 950, 1025
BseNI	ACTGG	3 cut(s)	314, 824, 887
BseRI	GAGGAG	3 cut(s)	134, 281, 512
BseSI	GKGCMC	1 cut(s)	807
BseXI	GCAGC	4 cut(s)	463, 711, 892, 1109
Bsh1236I	CGCG	2 cut(s)	504, 716
Bsh1285I	CGRYCG	1 cut(s)	979
BshFI	GGCC	3 cut(s)	361, 415, 773
BshNI	GGYRCC	1 cut(s)	464
BshTI	ACCGGT	1 cut(s)	974
BsiEI	CGRYCG	1 cut(s)	979
BsiHKAI	GWGCWC	1 cut(s)	247
BsiSI	CCGG	3 cut(s)	635, 950, 975
BslI	CCNNNNNNNGG	4 cut(s)	109, 411, 780, 974
BsmAI	GTCTC	1 cut(s)	193
BsmI	GAATGC	1 cut(s)	802
BsnI	GGCC	3 cut(s)	361, 415, 773
Bsp119I	TTCGAA	2 cut(s)	484, 852
Bsp1286I	GDGCHC	3 cut(s)	247, 788, 807
Bsp13I	TCCGGA	1 cut(s)	634
Bsp143I	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
BspACI	CCGC	2 cut(s)	502, 716
BspANI	GGCC	3 cut(s)	361, 415, 773
BspCNI	CTCAG	6 cut(s)	322, 577, 604, 781, 949, 1024
BspEI	TCCGGA	1 cut(s)	634
BspFNI	CGCG	2 cut(s)	504, 716
BspLI	GGNNCC	2 cut(s)	466, 785
BspMI	ACCTGC	1 cut(s)	187
BspPI	GGATC	4 cut(s)	504, 666, 673, 830
BspQI	GCTCTTC	1 cut(s)	252
BspT104I	TTCGAA	2 cut(s)	484, 852
BspT107I	GGYRCC	1 cut(s)	464
BsrFI	RCCGGY	1 cut(s)	974
BsrI	ACTGG	3 cut(s)	314, 824, 887
BssAI	RCCGGY	1 cut(s)	974
BssECI	CCNNGG	5 cut(s)	511, 728, 755, 774, 1056
BssMI	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
BssT1I	CCWWGG	2 cut(s)	728, 774
Bst2UI	CCWGG	2 cut(s)	276, 363
Bst4CI	ACNGT	3 cut(s)	260, 582, 928
Bst6I	CTCTTC	2 cut(s)	111, 252
BstAPI	GCANNNNNTGC	1 cut(s)	1094
BstBI	TTCGAA	2 cut(s)	484, 852
BstC8I	GCNNGC	2 cut(s)	87, 319
BstDEI	CTNAG	7 cut(s)	192, 330, 585, 612, 768, 936, 1011
BstDSI	CCRYGG	2 cut(s)	511, 1056
BstF5I	GGATG	3 cut(s)	318, 694, 839
BstFNI	CGCG	2 cut(s)	504, 716
BstKTI	GATC	8 cut(s)	30, 354, 499, 549, 591, 661, 681, 825
BstMAI	GTCTC	1 cut(s)	193
BstMBI	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
BstMCI	CGRYCG	1 cut(s)	979
BstMWI	GCNNNNNNNGC	3 cut(s)	507, 1094, 1106
BstNI	CCWGG	2 cut(s)	276, 363
BstNSI	RCATGY	2 cut(s)	698, 1092
BstSCI	CCNGG	3 cut(s)	274, 361, 948
BstSLI	GKGCMC	1 cut(s)	807
BstUI	CGCG	2 cut(s)	504, 716
BstV1I	GCAGC	4 cut(s)	463, 711, 892, 1109
BstV2I	GAAGAC	1 cut(s)	633
Bsu36I	CCTNAGG	2 cut(s)	768, 936
BsuRI	GGCC	3 cut(s)	361, 415, 773
BtgI	CCRYGG	2 cut(s)	511, 1056
BtsCI	GGATG	3 cut(s)	318, 694, 839
BtsIMutI	CAGTG	2 cut(s)	933, 1019
BveI	ACCTGC	1 cut(s)	187
Cac8I	GCNNGC	2 cut(s)	87, 319
Cfr10I	RCCGGY	1 cut(s)	974
Cfr13I	GGNCC	1 cut(s)	10
CseI	GACGC	1 cut(s)	493
Csp6I	GTAC	1 cut(s)	649
CspAI	ACCGGT	1 cut(s)	974
CviAII	CATG	6 cut(s)	185, 371, 623, 695, 986, 1089
CviQI	GTAC	1 cut(s)	649
DdeI	CTNAG	7 cut(s)	192, 330, 585, 612, 768, 936, 1011
DpnI	GATC	8 cut(s)	29, 353, 498, 548, 590, 660, 680, 824
DpnII	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
EaeI	YGGCCR	1 cut(s)	359
Eam1104I	CTCTTC	2 cut(s)	111, 252
EarI	CTCTTC	2 cut(s)	111, 252
Eco130I	CCWWGG	2 cut(s)	728, 774
Eco147I	AGGCCT	1 cut(s)	415
Eco24I	GRGCYC	1 cut(s)	788
Eco47I	GGWCC	1 cut(s)	10
Eco57I	CTGAAG	2 cut(s)	279, 884
Eco81I	CCTNAGG	2 cut(s)	768, 936
EcoRI	GAATTC	1 cut(s)	486
EcoRII	CCWGG	2 cut(s)	274, 361
EcoT14I	CCWWGG	2 cut(s)	728, 774
EcoT22I	ATGCAT	1 cut(s)	1090
EcoT38I	GRGCYC	1 cut(s)	788
ErhI	CCWWGG	2 cut(s)	728, 774
FaeI	CATG	6 cut(s)	188, 374, 626, 698, 989, 1092
FatI	CATG	6 cut(s)	184, 370, 622, 694, 985, 1088
FauNDI	CATATG	1 cut(s)	1105
FbaI	TGATCA	2 cut(s)	27, 546
Fnu4HI	GCNGC	5 cut(s)	452, 502, 725, 881, 1098
FokI	GGATG	3 cut(s)	325, 701, 826
FriOI	GRGCYC	1 cut(s)	788
Fsp4HI	GCNGC	5 cut(s)	452, 502, 725, 881, 1098
FspBI	CTAG	1 cut(s)	411
GluI	GCNGC	5 cut(s)	452, 502, 725, 881, 1098
HaeIII	GGCC	3 cut(s)	361, 415, 773
HapII	CCGG	3 cut(s)	635, 950, 975
HgaI	GACGC	1 cut(s)	493
Hin1II	CATG	6 cut(s)	188, 374, 626, 698, 989, 1092
HindIII	AAGCTT	1 cut(s)	83
HinfI	GANTC	6 cut(s)	38, 141, 374, 517, 982, 990
HpaII	CCGG	3 cut(s)	635, 950, 975
HphI	GGTGA	2 cut(s)	275, 756
Hpy188I	TCNGA	5 cut(s)	298, 574, 586, 864, 981
Hpy188III	TCNNGA	6 cut(s)	476, 491, 559, 607, 635, 686
Hpy99I	CGWCG	2 cut(s)	226, 1085
HpyAV	CCTTC	3 cut(s)	303, 805, 1112
HpyCH4III	ACNGT	3 cut(s)	260, 582, 928
HpyCH4V	TGCA	8 cut(s)	4, 380, 800, 1034, 1045, 1088, 1097, 1109
HpyF10VI	GCNNNNNNNGC	3 cut(s)	507, 1094, 1106
HpyF3I	CTNAG	7 cut(s)	192, 330, 585, 612, 768, 936, 1011
Hsp92II	CATG	6 cut(s)	188, 374, 626, 698, 989, 1092
Kpn2I	TCCGGA	1 cut(s)	634
Ksp22I	TGATCA	2 cut(s)	27, 546
Kzo9I	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
LguI	GCTCTTC	1 cut(s)	252
LmnI	GCTCC	2 cut(s)	94, 783
Lsp1109I	GCAGC	4 cut(s)	463, 711, 892, 1109
LweI	GCATC	2 cut(s)	330, 1075
MaeI	CTAG	1 cut(s)	411
MaeIII	GTNAC	4 cut(s)	281, 762, 928, 970
MalI	GATC	8 cut(s)	29, 353, 498, 548, 590, 660, 680, 824
MboI	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
MfeI	CAATTG	1 cut(s)	5
MhlI	GDGCHC	3 cut(s)	247, 788, 807
MlsI	TGGCCA	1 cut(s)	361
MluCI	AATT	7 cut(s)	5, 31, 51, 486, 719, 902, 1113
MluNI	TGGCCA	1 cut(s)	361
MlyI	GAGTC	2 cut(s)	32, 368
MmeI	TCCRAC	1 cut(s)	959
Mox20I	TGGCCA	1 cut(s)	361
Mph1103I	ATGCAT	1 cut(s)	1090
MroI	TCCGGA	1 cut(s)	634
MroXI	GAANNNNTTC	1 cut(s)	145
MscI	TGGCCA	1 cut(s)	361
MseI	TTAA	1 cut(s)	702
MslI	CAYNNNNRTG	1 cut(s)	687
Msp20I	TGGCCA	1 cut(s)	361
MspI	CCGG	3 cut(s)	635, 950, 975
MspR9I	CCNGG	3 cut(s)	276, 363, 950
MunI	CAATTG	1 cut(s)	5
Mva1269I	GAATGC	1 cut(s)	802
MvaI	CCWGG	2 cut(s)	276, 363
MvnI	CGCG	2 cut(s)	504, 716
MwoI	GCNNNNNNNGC	3 cut(s)	507, 1094, 1106
NciI	CCSGG	1 cut(s)	950
NdeI	CATATG	1 cut(s)	1105
NdeII	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
NlaIII	CATG	6 cut(s)	188, 374, 626, 698, 989, 1092
NlaIV	GGNNCC	2 cut(s)	466, 785
NmeAIII	GCCGAG	1 cut(s)	780
NmuCI	GTSAC	4 cut(s)	281, 762, 928, 970
NsiI	ATGCAT	1 cut(s)	1090
NspI	RCATGY	2 cut(s)	698, 1092
NspV	TTCGAA	2 cut(s)	484, 852
PceI	AGGCCT	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	252
PcsI	WCGNNNNNNNCGW	1 cut(s)	1077
PctI	GAATGC	1 cut(s)	802
PdmI	GAANNNNTTC	1 cut(s)	145
PfeI	GAWTC	4 cut(s)	141, 517, 982, 990
PinAI	ACCGGT	1 cut(s)	974
PkrI	GCNGC	5 cut(s)	453, 503, 726, 882, 1099
PleI	GAGTC	2 cut(s)	32, 368
PpsI	GAGTC	2 cut(s)	32, 368
Psp6I	CCWGG	2 cut(s)	274, 361
PspGI	CCWGG	2 cut(s)	274, 361
PspN4I	GGNNCC	2 cut(s)	466, 785
PspPI	GGNCC	1 cut(s)	10
RsaI	GTAC	1 cut(s)	650
RsaNI	GTAC	1 cut(s)	649
RseI	CAYNNNNRTG	1 cut(s)	687
SapI	GCTCTTC	1 cut(s)	252
SaqAI	TTAA	1 cut(s)	702
SatI	GCNGC	5 cut(s)	452, 502, 725, 881, 1098
Sau3AI	GATC	8 cut(s)	27, 351, 496, 546, 588, 658, 678, 822
Sau96I	GGNCC	1 cut(s)	10
ScaI	AGTACT	1 cut(s)	650
SchI	GAGTC	2 cut(s)	32, 368
ScrFI	CCNGG	3 cut(s)	276, 363, 950
SduI	GDGCHC	3 cut(s)	247, 788, 807
SetI	ASST	9 cut(s)	87, 201, 456, 769, 937, 970, 1001, 1030, 1102
SfaNI	GCATC	2 cut(s)	330, 1075
SfuI	TTCGAA	2 cut(s)	484, 852
SinI	GGWCC	1 cut(s)	10
SmiMI	CAYNNNNRTG	1 cut(s)	687
Sse9I	AATT	7 cut(s)	5, 31, 51, 486, 719, 902, 1113
SseBI	AGGCCT	1 cut(s)	415
SsiI	CCGC	2 cut(s)	502, 716
SspMI	CTAG	1 cut(s)	411
StuI	AGGCCT	1 cut(s)	415
StyD4I	CCNGG	3 cut(s)	274, 361, 948
StyI	CCWWGG	2 cut(s)	728, 774
TaaI	ACNGT	3 cut(s)	260, 582, 928
TaqI	TCGA	5 cut(s)	221, 484, 825, 852, 1083
TasI	AATT	7 cut(s)	5, 31, 51, 486, 719, 902, 1113
TatI	WGTACW	1 cut(s)	648
TauI	GCSGC	1 cut(s)	504
TfiI	GAWTC	4 cut(s)	141, 517, 982, 990
Tru1I	TTAA	1 cut(s)	702
Tru9I	TTAA	1 cut(s)	702
TscAI	CASTG	2 cut(s)	933, 1019
TseFI	GTSAC	4 cut(s)	281, 762, 928, 970
TseI	GCWGC	4 cut(s)	451, 724, 880, 1097
Tsp45I	GTSAC	4 cut(s)	281, 762, 928, 970
TspDTI	ATGAA	6 cut(s)	154, 239, 329, 639, 974, 994
TspGWI	ACGGA	4 cut(s)	134, 239, 845, 1073
TspRI	CASTG	2 cut(s)	933, 1019
VpaK11BI	GGWCC	1 cut(s)	10
XapI	RAATTY	2 cut(s)	486, 902
XceI	RCATGY	2 cut(s)	698, 1092
XmnI	GAANNNNTTC	1 cut(s)	145
XspI	CTAG	1 cut(s)	411
ZrmI	AGTACT	1 cut(s)	650
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.