Prupe.8G204200_v2.0.a1

Protein of unknown function (DUF3685)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
19166624 .. 19171567
4944 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G204200.7

Sequence Viewer

Length: 1557 bp
ATGGCAGAATATCTGGCTTCACCATTATGTATCAAAGTGCACATACAGAGAAGTTTCATCAGAGAGAAAGGCTTCACAACCCGGAATTCACGTTTCAAGATAGTGCAAAGTAGGAAGTATTCGTATGGAAGCGGCAAGACTGTTCTATTTCCAATGCGGAAAATGTGTGAGCTCACTGCTCCTGGCTTCACAAATATGAAAGTTAATCCTTTTCCTGAGGAAGCTTCCTTGAAATGTACTTGCTTGAGGTCTTTGGTAGGCCCTGATGGTGCAATAGCCTCTGACTGGTTACCTGTTGTTGATCAAGTGCTTCTGACGGCCAGTGTATTTCTCACATATATGGCTGGAGTAATTCCCCGTCACAACTCTAGTCCAACTTTTCGAAAGGAGATCTCCAATGACAATGTGGATCCTGGAACCTCAACCGCTTCTGGTAGTGGAACAAAGAATGATGACCCAGAAAATTCAGGTTATGCCTTGGATGCAGTGAAAAGGAAACTTTTGGATTCACTCCAGGCTTTTGAACTTGGGAATAATATGGGAAACAGGGTCCTTCAACATGAAGGATACACTGCAAAGCGACCTTTAAGTTTGAATGCTGTTGCTGATGGTCCCAGATTAAGATTGCTCTGGGCATCGTTTCTGCGAATTGAGGAAGAGGTGATTAATATCTCAAAATATGGAATTTCTAACTTGGATGACTGCTTGTCGGATTTTTCTGATGTTATACGAAAGTCTTGTCAGCCTGTATGCACGAGTTGGTTAGAAACAGAGCTTGATCTTTTAAACAGCAAGCCTAACAAGGCACTTGCTTTGCTTATGGATGGAAAGTTAAAAGGAGACAACATTGTATTACAGAACATCAGGAACGCAGGAAAGGAAGACCTTTATGCAGAACTAATGTGCTTCCTTAGTTTTGGTTCTCTCAGGGAGGGTTGCTGTTATGATGGTAACCTGTTTATGAAGCATGGAGTTTCCATTCTGGAAGATCTGGTGATAAGTTTAGCAGATGGGATAGTAAGCATATATTTGGAGCTTATTTCTGTTGACAGCAATTTCTCAGATGAATTGGATAGCCTGTCTTTGGCATTGTGTACTTTGTCAACACGAGCACTTCAAAGATTACGAAATGAGGTGGCTTTGTACCAATGGTTGTATCAAAATATGGAAGCAATTGCATCAATGTATGAGGATCGATTTGACTTGTGGACATTTCAGAGCCAACCCATCAAGGAATTAGACAATAGCTGGTCTGAAAATTATAGTTGGTGGAAATGGCTTAAACAGAAAAAATCTGGCACTGCGCGGTCAAGATTACATCAGGTTATGATAAGCCAGTTCTCTATGCCTGTAAAGCGAACAAAGGAATTAAGGGCCCTAACAGGGTGGAAGTATTACTTCAGCCTATTCCTCGAGTTATCTGATATTAGCATGCCGTTGATTAGAGCAGTTATTGACAAAGTCAGCAAGGCTCTCTCGTTTTTTCTAGTTAGCTTGATTGGGAGGTCATTAGGACTCATTTATACTGGAATTAGGCAGTCTCTACGTTGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

519

Amino Acids

58.55

Weight (kDa)

8.6

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1306
AciI CCGC 4 cut(s) 132, 157, 426, 1306
AclWI GGATC 3 cut(s) 404, 417, 1200
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 3 cut(s) 85, 463, 684
AcuI CTGAAG 1 cut(s) 1384
AfaI GTAC 3 cut(s) 238, 1096, 1145
AfiI CCNNNNNNNGG 3 cut(s) 285, 1084, 1383
AgsI TTSAA 6 cut(s) 97, 232, 524, 557, 595, 1118
AhdI GACNNNNNGTC 1 cut(s) 706
AjnI CCWGG 3 cut(s) 181, 412, 513
AluBI AGCT 6 cut(s) 172, 224, 775, 1036, 1248, 1494
AluI AGCT 6 cut(s) 172, 224, 775, 1036, 1248, 1494
Alw21I GWGCWC 3 cut(s) 42, 174, 1114
Alw26I GTCTC 2 cut(s) 834, 1545
Alw44I GTGCAC 1 cut(s) 38
AlwI GGATC 3 cut(s) 404, 417, 1200
Ama87I CYCGRG 1 cut(s) 1412
AoxI GGCC 3 cut(s) 259, 318, 1374
ApaI GGGCCC 1 cut(s) 1378
ApaLI GTGCAC 1 cut(s) 38
ApoI RAATTY 3 cut(s) 85, 463, 684
ArsI GACNNNNNNTTYG 2 cut(s) 724, 756
AseI ATTAAT 1 cut(s) 666
Asp700I GAANNNNTTC 1 cut(s) 71
AspLEI GCGC 1 cut(s) 1306
AspS9I GGNCC 5 cut(s) 260, 550, 611, 1374, 1375
AsuC2I CCSGG 1 cut(s) 82
AsuHPI GGTGA 3 cut(s) 12, 673, 1006
AsuII TTCGAA 1 cut(s) 382
AvaI CYCGRG 1 cut(s) 1412
AvaII GGWCC 2 cut(s) 550, 611
AxyI CCTNAGG 1 cut(s) 216
BaeGI GKGCMC 2 cut(s) 42, 1378
BamHI GGATCC 1 cut(s) 409
BanII GRGCYC 2 cut(s) 174, 1378
BauI CACGAG 2 cut(s) 754, 1107
BbsI GAAGAC 1 cut(s) 888
Bbv12I GWGCWC 3 cut(s) 42, 174, 1114
BccI CCATC 6 cut(s) 260, 602, 818, 941, 1004, 1235
BceAI ACGGC 2 cut(s) 333, 1420
BciT130I CCWGG 3 cut(s) 183, 414, 515
BciVI GTATCC 1 cut(s) 560
BclI TGATCA 1 cut(s) 301
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 2 cut(s) 834, 1545
BfaI CTAG 2 cut(s) 369, 1487
BfuI GTATCC 1 cut(s) 560
BglII AGATCT 2 cut(s) 390, 988
BisI GCNGC 1 cut(s) 133
BlsI GCNGC 1 cut(s) 134
Bme1390I CCNGG 4 cut(s) 82, 183, 414, 515
Bme18I GGWCC 2 cut(s) 550, 611
BmeRI GACNNNNNGTC 1 cut(s) 706
BmeT110I CYCGRG 1 cut(s) 1412
BmgT120I GGNCC 5 cut(s) 260, 550, 611, 1374, 1375
BmiI GGNNCC 5 cut(s) 411, 418, 551, 613, 1376
BmrFI CCNGG 4 cut(s) 82, 183, 414, 515
BmsI GCATC 3 cut(s) 472, 644, 1187
BpiI GAAGAC 1 cut(s) 888
BpmI CTGGAG 2 cut(s) 366, 497
Bpu14I TTCGAA 1 cut(s) 382
BpuEI CTTGAG 1 cut(s) 265
BpuMI CCSGG 1 cut(s) 82
Bsa29I ATCGAT 1 cut(s) 1195
BsaBI GATNNNNATC 1 cut(s) 668
BsaJI CCNNGG 1 cut(s) 477
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 1084, 1383
Bse1I ACTGG 4 cut(s) 290, 321, 1336, 1531
Bse21I CCTNAGG 1 cut(s) 216
Bse8I GATNNNNATC 1 cut(s) 668
BseBI CCWGG 3 cut(s) 183, 414, 515
BseCI ATCGAT 1 cut(s) 1195
BseDI CCNNGG 1 cut(s) 477
BseGI GGATG 3 cut(s) 487, 703, 829
BseJI GATNNNNATC 1 cut(s) 668
BseLI CCNNNNNNNGG 3 cut(s) 285, 1084, 1383
BseMII CTCAG 3 cut(s) 207, 940, 1074
BseNI ACTGG 4 cut(s) 290, 321, 1336, 1531
BseSI GKGCMC 2 cut(s) 42, 1378
Bsh1236I CGCG 1 cut(s) 1306
BshFI GGCC 3 cut(s) 261, 320, 1376
BshVI ATCGAT 1 cut(s) 1195
BsiHKAI GWGCWC 3 cut(s) 42, 174, 1114
BsiHKCI CYCGRG 1 cut(s) 1412
BsiSI CCGG 1 cut(s) 82
BslFI GGGAC 1 cut(s) 597
BslI CCNNNNNNNGG 3 cut(s) 285, 1084, 1383
BsmAI GTCTC 2 cut(s) 834, 1545
BsmFI GGGAC 1 cut(s) 597
BsmI GAATGC 1 cut(s) 601
BsnI GGCC 3 cut(s) 261, 320, 1376
BsoBI CYCGRG 1 cut(s) 1412
Bsp119I TTCGAA 1 cut(s) 382
Bsp120I GGGCCC 1 cut(s) 1374
Bsp1286I GDGCHC 4 cut(s) 42, 174, 1114, 1378
Bsp143I GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
BspACI CCGC 4 cut(s) 132, 157, 426, 1306
BspANI GGCC 3 cut(s) 261, 320, 1376
BspCNI CTCAG 3 cut(s) 208, 939, 1073
BspDI ATCGAT 1 cut(s) 1195
BspFNI CGCG 1 cut(s) 1306
BspLI GGNNCC 5 cut(s) 411, 418, 551, 613, 1376
BspPI GGATC 3 cut(s) 404, 417, 1200
BspT104I TTCGAA 1 cut(s) 382
BsrI ACTGG 4 cut(s) 290, 321, 1336, 1531
BssECI CCNNGG 1 cut(s) 477
BssMI GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
BssSI CACGAG 2 cut(s) 754, 1107
BssT1I CCWWGG 1 cut(s) 477
Bst2BI CACGAG 2 cut(s) 754, 1107
Bst2UI CCWGG 3 cut(s) 183, 414, 515
Bst4CI ACNGT 1 cut(s) 142
Bst6I CTCTTC 1 cut(s) 651
BstBI TTCGAA 1 cut(s) 382
BstC8I GCNNGC 2 cut(s) 794, 1433
BstDEI CTNAG 4 cut(s) 216, 911, 926, 1060
BstEII GGTNACC 2 cut(s) 288, 950
BstF5I GGATG 3 cut(s) 487, 703, 829
BstFNI CGCG 1 cut(s) 1306
BstHHI GCGC 1 cut(s) 1306
BstKTI GATC 6 cut(s) 304, 393, 412, 781, 991, 1195
BstMAI GTCTC 2 cut(s) 834, 1545
BstMBI GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
BstMWI GCNNNNNNNGC 2 cut(s) 482, 1354
BstNI CCWGG 3 cut(s) 183, 414, 515
BstNSI RCATGY 1 cut(s) 1435
BstPI GGTNACC 2 cut(s) 288, 950
BstSCI CCNGG 4 cut(s) 80, 181, 412, 513
BstSLI GKGCMC 2 cut(s) 42, 1378
BstUI CGCG 1 cut(s) 1306
BstV2I GAAGAC 1 cut(s) 888
BstX2I RGATCY 3 cut(s) 390, 409, 988
BstYI RGATCY 3 cut(s) 390, 409, 988
Bsu15I ATCGAT 1 cut(s) 1195
Bsu36I CCTNAGG 1 cut(s) 216
BsuI GTATCC 1 cut(s) 560
BsuRI GGCC 3 cut(s) 261, 320, 1376
BsuTUI ATCGAT 1 cut(s) 1195
BtsCI GGATG 3 cut(s) 487, 703, 829
BtsI GCAGTG 4 cut(s) 174, 492, 570, 1299
BtsIMutI CAGTG 5 cut(s) 174, 328, 492, 570, 1299
Cac8I GCNNGC 2 cut(s) 794, 1433
CfoI GCGC 1 cut(s) 1306
Cfr13I GGNCC 5 cut(s) 260, 550, 611, 1374, 1375
ClaI ATCGAT 1 cut(s) 1195
Csp6I GTAC 3 cut(s) 237, 1095, 1144
CviAII CATG 3 cut(s) 560, 968, 1432
CviQI GTAC 3 cut(s) 237, 1095, 1144
DdeI CTNAG 4 cut(s) 216, 911, 926, 1060
DpnI GATC 6 cut(s) 303, 392, 411, 780, 990, 1194
DpnII GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
DraI TTTAAA 1 cut(s) 786
DriI GACNNNNNGTC 1 cut(s) 706
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 1 cut(s) 651
Eam1105I GACNNNNNGTC 1 cut(s) 706
EarI CTCTTC 1 cut(s) 651
Ecl136II GAGCTC 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 477
Eco24I GRGCYC 2 cut(s) 174, 1378
Eco47I GGWCC 2 cut(s) 550, 611
Eco53kI GAGCTC 1 cut(s) 172
Eco57I CTGAAG 1 cut(s) 1384
Eco81I CCTNAGG 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 1412
Eco91I GGTNACC 2 cut(s) 288, 950
EcoICRI GAGCTC 1 cut(s) 172
EcoO109I RGGNCCY 4 cut(s) 260, 550, 1374, 1375
EcoO65I GGTNACC 2 cut(s) 288, 950
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 3 cut(s) 181, 412, 513
EcoT14I CCWWGG 1 cut(s) 477
EcoT38I GRGCYC 2 cut(s) 174, 1378
ErhI CCWWGG 1 cut(s) 477
FaeI CATG 3 cut(s) 563, 971, 1435
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 1 cut(s) 597
FatI CATG 3 cut(s) 559, 967, 1431
FbaI TGATCA 1 cut(s) 301
Fnu4HI GCNGC 1 cut(s) 133
FokI GGATG 3 cut(s) 494, 710, 836
FriOI GRGCYC 2 cut(s) 174, 1378
Fsp4HI GCNGC 1 cut(s) 133
FspBI CTAG 2 cut(s) 369, 1487
GlaI GCGC 1 cut(s) 1305
GluI GCNGC 1 cut(s) 133
GsuI CTGGAG 2 cut(s) 366, 497
HaeIII GGCC 3 cut(s) 261, 320, 1376
HapII CCGG 1 cut(s) 82
HhaI GCGC 1 cut(s) 1306
Hin1II CATG 3 cut(s) 563, 971, 1435
Hin6I GCGC 1 cut(s) 1304
HinP1I GCGC 1 cut(s) 1304
HincII GTYRAC 2 cut(s) 1048, 1104
HindII GTYRAC 2 cut(s) 1048, 1104
HindIII AAGCTT 1 cut(s) 222
HinfI GANTC 2 cut(s) 506, 1515
HpaII CCGG 1 cut(s) 82
HphI GGTGA 3 cut(s) 12, 673, 1006
Hpy166II GTNNAC 5 cut(s) 40, 1048, 1095, 1104, 1209
Hpy188I TCNGA 9 cut(s) 62, 283, 315, 712, 721, 1063, 1218, 1255, 1423
Hpy188III TCNNGA 5 cut(s) 97, 215, 865, 983, 1311
Hpy8I GTNNAC 5 cut(s) 40, 1048, 1095, 1104, 1209
HpyAV CCTTC 2 cut(s) 557, 563
HpyCH4III ACNGT 1 cut(s) 142
HpyCH4IV ACGT 2 cut(s) 91, 1546
HpyCH4V TGCA 8 cut(s) 40, 106, 272, 485, 575, 753, 893, 1178
HpyF10VI GCNNNNNNNGC 2 cut(s) 482, 1354
HpyF3I CTNAG 4 cut(s) 216, 911, 926, 1060
HpySE526I ACGT 2 cut(s) 91, 1546
Hsp92II CATG 3 cut(s) 563, 971, 1435
HspAI GCGC 1 cut(s) 1304
Ksp22I TGATCA 1 cut(s) 301
Kzo9I GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
LmnI GCTCC 2 cut(s) 184, 1033
LweI GCATC 3 cut(s) 472, 644, 1187
MaeI CTAG 2 cut(s) 369, 1487
MaeII ACGT 2 cut(s) 91, 1546
MaeIII GTNAC 3 cut(s) 288, 359, 950
MalI GATC 6 cut(s) 303, 392, 411, 780, 990, 1194
MboI GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
MboII GAAGA 3 cut(s) 668, 893, 998
MfeI CAATTG 1 cut(s) 1173
MflI RGATCY 3 cut(s) 390, 409, 988
MhlI GDGCHC 4 cut(s) 42, 174, 1114, 1378
MlyI GAGTC 1 cut(s) 1509
MmeI TCCRAC 3 cut(s) 398, 690, 1529
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 8 cut(s) 204, 587, 620, 666, 785, 833, 1281, 1370
MslI CAYNNNNRTG 3 cut(s) 25, 194, 338
MspI CCGG 1 cut(s) 82
MspR9I CCNGG 4 cut(s) 82, 183, 414, 515
MunI CAATTG 1 cut(s) 1173
Mva1269I GAATGC 1 cut(s) 601
MvaI CCWGG 3 cut(s) 183, 414, 515
MvnI CGCG 1 cut(s) 1306
MwoI GCNNNNNNNGC 2 cut(s) 482, 1354
NciI CCSGG 1 cut(s) 82
NdeII GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
NlaIII CATG 3 cut(s) 563, 971, 1435
NlaIV GGNNCC 5 cut(s) 411, 418, 551, 613, 1376
NmuCI GTSAC 1 cut(s) 359
NspI RCATGY 1 cut(s) 1435
NspV TTCGAA 1 cut(s) 382
PaeI GCATGC 1 cut(s) 1435
PaeR7I CTCGAG 1 cut(s) 1412
PctI GAATGC 1 cut(s) 601
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 1 cut(s) 506
PflFI GACNNNGTC 1 cut(s) 1460
PfoI TCCNGGA 1 cut(s) 412
PkrI GCNGC 1 cut(s) 134
PleI GAGTC 1 cut(s) 1509
PpsI GAGTC 1 cut(s) 1509
PpuMI RGGWCCY 1 cut(s) 550
PshBI ATTAAT 1 cut(s) 666
Psp124BI GAGCTC 1 cut(s) 174
Psp5II RGGWCCY 1 cut(s) 550
Psp6I CCWGG 3 cut(s) 181, 412, 513
PspEI GGTNACC 2 cut(s) 288, 950
PspGI CCWGG 3 cut(s) 181, 412, 513
PspN4I GGNNCC 5 cut(s) 411, 418, 551, 613, 1376
PspOMI GGGCCC 1 cut(s) 1374
PspPI GGNCC 5 cut(s) 260, 550, 611, 1374, 1375
PspPPI RGGWCCY 1 cut(s) 550
PspXI VCTCGAGB 1 cut(s) 1412
PsuI RGATCY 3 cut(s) 390, 409, 988
PsyI GACNNNGTC 1 cut(s) 1460
RsaI GTAC 3 cut(s) 238, 1096, 1145
RsaNI GTAC 3 cut(s) 237, 1095, 1144
RseI CAYNNNNRTG 3 cut(s) 25, 194, 338
SacI GAGCTC 1 cut(s) 174
SaqAI TTAA 8 cut(s) 204, 587, 620, 666, 785, 833, 1281, 1370
SatI GCNGC 1 cut(s) 133
Sau3AI GATC 6 cut(s) 301, 390, 409, 778, 988, 1192
Sau96I GGNCC 5 cut(s) 260, 550, 611, 1374, 1375
SchI GAGTC 1 cut(s) 1509
ScrFI CCNGG 4 cut(s) 82, 183, 414, 515
SduI GDGCHC 4 cut(s) 42, 174, 1114, 1378
SfaNI GCATC 3 cut(s) 472, 644, 1187
Sfr274I CTCGAG 1 cut(s) 1412
SfuI TTCGAA 1 cut(s) 382
SinI GGWCC 2 cut(s) 550, 611
SlaI CTCGAG 1 cut(s) 1412
SmiMI CAYNNNNRTG 3 cut(s) 25, 194, 338
SmlI CTYRAG 2 cut(s) 244, 1412
SmoI CTYRAG 2 cut(s) 244, 1412
SphI GCATGC 1 cut(s) 1435
SsiI CCGC 4 cut(s) 132, 157, 426, 1306
SspMI CTAG 2 cut(s) 369, 1487
SstI GAGCTC 1 cut(s) 174
StyD4I CCNGG 4 cut(s) 80, 181, 412, 513
StyI CCWWGG 1 cut(s) 477
TaaI ACNGT 1 cut(s) 142
TaiI ACGT 2 cut(s) 94, 1549
TaqI TCGA 3 cut(s) 382, 1195, 1413
TatI WGTACW 2 cut(s) 236, 1094
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 1 cut(s) 506
Tru1I TTAA 8 cut(s) 204, 587, 620, 666, 785, 833, 1281, 1370
Tru9I TTAA 8 cut(s) 204, 587, 620, 666, 785, 833, 1281, 1370
TscAI CASTG 5 cut(s) 181, 328, 492, 577, 1306
TseFI GTSAC 1 cut(s) 359
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 5 cut(s) 46, 212, 576, 977, 1080
TspRI CASTG 5 cut(s) 181, 328, 492, 577, 1306
Tth111I GACNNNGTC 1 cut(s) 1460
VneI GTGCAC 1 cut(s) 38
VpaK11BI GGWCC 2 cut(s) 550, 611
VspI ATTAAT 1 cut(s) 666
XapI RAATTY 3 cut(s) 85, 463, 684
XceI RCATGY 1 cut(s) 1435
XcmI CCANNNNNNNNNTGG 1 cut(s) 403
XhoI CTCGAG 1 cut(s) 1412
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 2 cut(s) 369, 1487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.