Prupe.8G206400_v2.0.a1

Belongs to the thiolase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
19321695 .. 19324805
3111 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G206400.1

Sequence Viewer

Length: 1404 bp
ATGGAGAAAGCGCATAACAGACAGCGTGTTCTGCTTCAGCATCTGTTGCCCAATTGTTCTTTTTCCGCTGCTCCTCCTGAAACCCATCAATCTGCTGCCCTGTCTGCTTCAATATGTGCTGCTGGGGATAGCGCTGCGTACCACAGAACAGCTGCTTTTGGAGACGATGTAGTGATTGTGGCAGCCTACCGTACTGCCATTTGCAAAGCAAAGCGAGGAGGCTTTAAGGATACTTCACCTGATGATTTACTGGCTCCTGTTTTAAAGGCACTAATTGAGAGGACAAATTTGAACCCAGGTGAAGTAGGGGATATAGTTGTTGGTACGGTTATGGCACCTGGCTCACTTAGAGCAACTGAATGCAGGATGGCTGCATTTTATGCTGGTTTCCCTGATACGGTTCCCATCAGAACCGTCAACAGGCAATGTTCATCAGGCCTTCAGGCAGTTGCTGATGTAGCTGCTTCTATAAAAGCCGGATTCTATGAAATTGGTGTTGCAGCTGGATTGGAGTCCATGTCAGTTGATAAACTTGGCAGGATGAACAAAATTAACCCTAAAGTAGATATCTTTGCACAAGCCCGTGACTGCCTTCTTCCCATGGGTATTACCTCTGAAAATGTTGCACAGCGATATGGTGTGACACGGCAGGAGCAAGACAAAGCTGCTGTTGAATCTCATAGCCGTGCTGCTGCAGCAACAGCATCAGGCAAATTCCAAGATGAAATTGTCCCTGTATCTACTAAGATTGTGGATCCGAAAACTGGAGAGGAGAGGCCTGTTACAATTTCTGTGGATGATGGGATCCGGCCAAATGCAAACATGAATGATTTGGCAAAGCTGAAGCCTGCGTTTAAAGCAGATGGGTCTACAACTGCAGGAAATGCTAGCCAGGTGAGTGATGGTGCTGGAGCAGTTCTCCTCATGAAGAGAAGTTTAGCTATGCAGAAGGGGCTTCCTATTCTTGGTGTTTTCAGGAGTTTTGCTGCTGTTGGTGTTGACCCCGCTGTCATGGGAATAGGTCCAGCTGCTGCAATTCCAGTTGCGGTGAAATCTGCTGGTCTGGAGCTTGATGATATTGATCTATTTGAGATAAATGAGGCATTTGCATCTCAATATGTATATTGTTGCAAGAAATTGGAGCTTGATCCTGAAAAAGTCAATGTTAATGGAGGCGCTATTGCTCTAGGGCATCCTTTGGGCGCTACAGGTGCTCGCTGTGTTGCAACTCTATTGAATGAGATGAAGCGTCGTGGCAAGGATCACCGCTTTGGTGTGATATCCATGTGCATAGGCTCGGGTATGGGGGCTGCTGCAGTTTTTGAGAGAGGGGACTCAGTTGATGAGCTGTGCAACGTTAGAACAGTTGAAAGGAACAATCTTTTATCAAATGATGCTAGGTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

468

Amino Acids

49.1

Weight (kDa)

7.03

Isoelectric Point (pI)

29.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0009799)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1007
AccB1I GGYRCC 1 cut(s) 334
AccI GTMKAC 1 cut(s) 869
AciI CCGC 4 cut(s) 66, 1005, 1046, 1267
AclI AACGTT 1 cut(s) 1356
AclWI GGATC 6 cut(s) 749, 762, 799, 812, 1142, 1269
AcoI YGGCCR 1 cut(s) 809
AcsI RAATTY 2 cut(s) 286, 713
AcuI CTGAAG 3 cut(s) 20, 425, 863
AfaI GTAC 3 cut(s) 140, 193, 325
AfeI AGCGCT 1 cut(s) 133
AfiI CCNNNNNNNGG 4 cut(s) 397, 420, 764, 965
AgsI TTSAA 5 cut(s) 111, 292, 674, 1237, 1370
AjnI CCWGG 3 cut(s) 295, 337, 891
Alw21I GWGCWC 1 cut(s) 1216
Alw26I GTCTC 1 cut(s) 156
AlwI GGATC 6 cut(s) 749, 762, 799, 812, 1142, 1269
AlwNI CAGNNNCTG 3 cut(s) 43, 452, 1031
Ama87I CYCGRG 1 cut(s) 1297
Aor51HI AGCGCT 1 cut(s) 133
AoxI GGCC 3 cut(s) 436, 776, 809
ApoI RAATTY 2 cut(s) 286, 713
AspLEI GCGC 4 cut(s) 13, 134, 1178, 1205
AspS9I GGNCC 1 cut(s) 1022
AsuHPI GGTGA 5 cut(s) 228, 311, 907, 1060, 1256
AsuNHI GCTAGC 1 cut(s) 887
AvaI CYCGRG 1 cut(s) 1297
AvaII GGWCC 1 cut(s) 1022
BamHI GGATCC 2 cut(s) 754, 804
BanI GGYRCC 1 cut(s) 334
Bbv12I GWGCWC 1 cut(s) 1216
BccI CCATC 6 cut(s) 93, 361, 413, 794, 857, 896
BceAI ACGGC 2 cut(s) 662, 669
BciT130I CCWGG 3 cut(s) 297, 339, 893
BciVI GTATCC 1 cut(s) 223
BcoDI GTCTC 1 cut(s) 156
BfaI CTAG 3 cut(s) 888, 1187, 1398
BfmI CTRYAG 4 cut(s) 693, 876, 1206, 1314
BfoI RGCGCY 3 cut(s) 135, 1179, 1206
BfuI GTATCC 1 cut(s) 223
Bme1390I CCNGG 3 cut(s) 297, 339, 893
Bme18I GGWCC 1 cut(s) 1022
BmeT110I CYCGRG 1 cut(s) 1297
BmgT120I GGNCC 1 cut(s) 1022
BmiI GGNNCC 5 cut(s) 255, 336, 402, 756, 806
BmrFI CCNGG 3 cut(s) 297, 339, 893
BmsI GCATC 5 cut(s) 49, 713, 1118, 1201, 1384
BmtI GCTAGC 1 cut(s) 891
BplI GAGNNNNNCTC 2 cut(s) 903, 935
BpmI CTGGAG 3 cut(s) 786, 930, 1085
BsaBI GATNNNNATC 1 cut(s) 1080
BsaJI CCNNGG 2 cut(s) 295, 600
BsaXI ACNNNNNCTCC 4 cut(s) 153, 183, 503, 533
Bsc4I CCNNNNNNNGG 4 cut(s) 397, 420, 764, 965
Bse1I ACTGG 3 cut(s) 255, 769, 1040
Bse3DI GCAATG 1 cut(s) 431
Bse8I GATNNNNATC 1 cut(s) 1080
BseBI CCWGG 3 cut(s) 297, 339, 893
BseDI CCNNGG 2 cut(s) 295, 600
BseGI GGATG 4 cut(s) 372, 546, 802, 1192
BseJI GATNNNNATC 1 cut(s) 1080
BseLI CCNNNNNNNGG 4 cut(s) 397, 420, 764, 965
BseMI GCAATG 1 cut(s) 431
BseMII CTCAG 1 cut(s) 1350
BseNI ACTGG 3 cut(s) 255, 769, 1040
BseRI GAGGAG 4 cut(s) 63, 231, 785, 911
BseYI CCCAGC 1 cut(s) 122
BshFI GGCC 3 cut(s) 438, 778, 811
BshNI GGYRCC 1 cut(s) 334
BsiHKAI GWGCWC 1 cut(s) 1216
BsiHKCI CYCGRG 1 cut(s) 1297
BsiSI CCGG 2 cut(s) 477, 808
BslFI GGGAC 2 cut(s) 716, 1346
BslI CCNNNNNNNGG 4 cut(s) 397, 420, 764, 965
BsmAI GTCTC 1 cut(s) 156
BsmBI CGTCTC 1 cut(s) 156
BsmFI GGGAC 2 cut(s) 716, 1346
BsmI GAATGC 1 cut(s) 365
BsnI GGCC 3 cut(s) 438, 778, 811
BsoBI CYCGRG 1 cut(s) 1297
Bsp1286I GDGCHC 1 cut(s) 1216
Bsp143I GATC 5 cut(s) 754, 804, 1081, 1147, 1261
Bsp19I CCATGG 1 cut(s) 600
BspACI CCGC 4 cut(s) 66, 1005, 1046, 1267
BspANI GGCC 3 cut(s) 438, 778, 811
BspCNI CTCAG 1 cut(s) 1349
BspHI TCATGA 1 cut(s) 924
BspLI GGNNCC 5 cut(s) 255, 336, 402, 756, 806
BspMAI CTGCAG 3 cut(s) 697, 880, 1318
BspOI GCTAGC 1 cut(s) 891
BspPI GGATC 6 cut(s) 749, 762, 799, 812, 1142, 1269
BspT107I GGYRCC 1 cut(s) 334
BsrDI GCAATG 1 cut(s) 431
BsrI ACTGG 3 cut(s) 255, 769, 1040
BssECI CCNNGG 2 cut(s) 295, 600
BssMI GATC 5 cut(s) 754, 804, 1081, 1147, 1261
BssT1I CCWWGG 1 cut(s) 600
Bst2UI CCWGG 3 cut(s) 297, 339, 893
Bst4CI ACNGT 5 cut(s) 191, 328, 400, 415, 1366
Bst6I CTCTTC 1 cut(s) 923
BstAPI GCANNNNNTGC 3 cut(s) 46, 380, 884
BstC8I GCNNGC 3 cut(s) 849, 889, 1216
BstDEI CTNAG 3 cut(s) 347, 744, 1336
BstDSI CCRYGG 1 cut(s) 600
BstF5I GGATG 4 cut(s) 372, 546, 802, 1192
BstH2I RGCGCY 3 cut(s) 135, 1179, 1206
BstHHI GCGC 4 cut(s) 13, 134, 1178, 1205
BstKTI GATC 5 cut(s) 757, 807, 1084, 1150, 1264
BstMAI GTCTC 1 cut(s) 156
BstMBI GATC 5 cut(s) 754, 804, 1081, 1147, 1261
BstNI CCWGG 3 cut(s) 297, 339, 893
BstSCI CCNGG 3 cut(s) 295, 337, 891
BstSFI CTRYAG 4 cut(s) 693, 876, 1206, 1314
BstX2I RGATCY 2 cut(s) 754, 804
BstYI RGATCY 2 cut(s) 754, 804
BsuI GTATCC 1 cut(s) 223
BsuRI GGCC 3 cut(s) 438, 778, 811
BtgI CCRYGG 1 cut(s) 600
BtsCI GGATG 4 cut(s) 372, 546, 802, 1192
Cac8I GCNNGC 3 cut(s) 849, 889, 1216
CaiI CAGNNNCTG 3 cut(s) 43, 452, 1031
CciI TCATGA 1 cut(s) 924
CfoI GCGC 4 cut(s) 13, 134, 1178, 1205
Cfr13I GGNCC 1 cut(s) 1022
CseI GACGC 1 cut(s) 1238
Csp6I GTAC 3 cut(s) 139, 192, 324
CspCI CAANNNNNGTGG 2 cut(s) 774, 809
CviAII CATG 6 cut(s) 517, 601, 823, 925, 1012, 1285
CviQI GTAC 3 cut(s) 139, 192, 324
DdeI CTNAG 3 cut(s) 347, 744, 1336
DpnI GATC 5 cut(s) 756, 806, 1083, 1149, 1263
DpnII GATC 5 cut(s) 754, 804, 1081, 1147, 1261
DraI TTTAAA 2 cut(s) 264, 856
DrdI GACNNNNNNGTC 1 cut(s) 1007
DseDI GACNNNNNNGTC 1 cut(s) 1007
EaeI YGGCCR 1 cut(s) 809
Eam1104I CTCTTC 1 cut(s) 923
EarI CTCTTC 1 cut(s) 923
Eco130I CCWWGG 1 cut(s) 600
Eco147I AGGCCT 2 cut(s) 438, 778
Eco32I GATATC 2 cut(s) 568, 1281
Eco47I GGWCC 1 cut(s) 1022
Eco47III AGCGCT 1 cut(s) 133
Eco57I CTGAAG 3 cut(s) 20, 425, 863
Eco88I CYCGRG 1 cut(s) 1297
EcoRII CCWGG 3 cut(s) 295, 337, 891
EcoRV GATATC 2 cut(s) 568, 1281
EcoT14I CCWWGG 1 cut(s) 600
ErhI CCWWGG 1 cut(s) 600
Esp3I CGTCTC 1 cut(s) 156
FaeI CATG 6 cut(s) 520, 604, 826, 928, 1015, 1288
FaqI GGGAC 2 cut(s) 716, 1346
FatI CATG 6 cut(s) 516, 600, 822, 924, 1011, 1284
FauI CCCGC 1 cut(s) 1012
FblI GTMKAC 1 cut(s) 869
FokI GGATG 4 cut(s) 379, 553, 809, 1179
FspBI CTAG 3 cut(s) 888, 1187, 1398
GlaI GCGC 4 cut(s) 12, 133, 1177, 1204
GsaI CCCAGC 1 cut(s) 126
GsuI CTGGAG 3 cut(s) 786, 930, 1085
HaeII RGCGCY 3 cut(s) 135, 1179, 1206
HaeIII GGCC 3 cut(s) 438, 778, 811
HapII CCGG 2 cut(s) 477, 808
HgaI GACGC 1 cut(s) 1238
HhaI GCGC 4 cut(s) 13, 134, 1178, 1205
Hin1II CATG 6 cut(s) 520, 604, 826, 928, 1015, 1288
Hin6I GCGC 4 cut(s) 11, 132, 1176, 1203
HinP1I GCGC 4 cut(s) 11, 132, 1176, 1203
HincII GTYRAC 2 cut(s) 418, 1000
HindII GTYRAC 2 cut(s) 418, 1000
HinfI GANTC 4 cut(s) 480, 512, 674, 1334
HpaII CCGG 2 cut(s) 477, 808
HphI GGTGA 5 cut(s) 228, 311, 907, 1060, 1256
Hpy166II GTNNAC 3 cut(s) 418, 870, 1000
Hpy188I TCNGA 3 cut(s) 410, 616, 759
Hpy188III TCNNGA 5 cut(s) 77, 925, 976, 1064, 1151
Hpy8I GTNNAC 3 cut(s) 418, 870, 1000
Hpy99I CGWCG 1 cut(s) 1254
HpyAV CCTTC 3 cut(s) 449, 602, 943
HpyCH4III ACNGT 5 cut(s) 191, 328, 400, 415, 1366
HpyCH4IV ACGT 1 cut(s) 1356
HpyF3I CTNAG 3 cut(s) 347, 744, 1336
HpySE526I ACGT 1 cut(s) 1356
Hsp92II CATG 6 cut(s) 520, 604, 826, 928, 1015, 1288
HspAI GCGC 4 cut(s) 11, 132, 1176, 1203
Kzo9I GATC 5 cut(s) 754, 804, 1081, 1147, 1261
LmnI GCTCC 6 cut(s) 76, 259, 652, 911, 1066, 1141
LweI GCATC 5 cut(s) 49, 713, 1118, 1201, 1384
MaeI CTAG 3 cut(s) 888, 1187, 1398
MaeII ACGT 1 cut(s) 1356
MaeIII GTNAC 3 cut(s) 584, 640, 781
MalI GATC 5 cut(s) 756, 806, 1083, 1149, 1263
MboI GATC 5 cut(s) 754, 804, 1081, 1147, 1261
MboII GAAGA 2 cut(s) 587, 940
MfeI CAATTG 1 cut(s) 52
MflI RGATCY 2 cut(s) 754, 804
MhlI GDGCHC 1 cut(s) 1216
MlyI GAGTC 2 cut(s) 521, 1328
MseI TTAA 5 cut(s) 225, 263, 552, 855, 1167
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 5 cut(s) 68, 152, 503, 1007, 1028
MspI CCGG 2 cut(s) 477, 808
MspR9I CCNGG 3 cut(s) 297, 339, 893
MunI CAATTG 1 cut(s) 52
Mva1269I GAATGC 1 cut(s) 365
MvaI CCWGG 3 cut(s) 297, 339, 893
NcoI CCATGG 1 cut(s) 600
NdeII GATC 5 cut(s) 754, 804, 1081, 1147, 1261
NheI GCTAGC 1 cut(s) 887
NlaIII CATG 6 cut(s) 520, 604, 826, 928, 1015, 1288
NlaIV GGNNCC 5 cut(s) 255, 336, 402, 756, 806
NmuCI GTSAC 2 cut(s) 584, 640
PagI TCATGA 1 cut(s) 924
PceI AGGCCT 2 cut(s) 438, 778
PctI GAATGC 1 cut(s) 365
PfeI GAWTC 2 cut(s) 480, 674
PleI GAGTC 2 cut(s) 520, 1328
PpsI GAGTC 2 cut(s) 520, 1328
Psp1406I AACGTT 1 cut(s) 1356
Psp6I CCWGG 3 cut(s) 295, 337, 891
PspFI CCCAGC 1 cut(s) 122
PspGI CCWGG 3 cut(s) 295, 337, 891
PspN4I GGNNCC 5 cut(s) 255, 336, 402, 756, 806
PspPI GGNCC 1 cut(s) 1022
PstI CTGCAG 3 cut(s) 697, 880, 1318
PstNI CAGNNNCTG 3 cut(s) 43, 452, 1031
PsuI RGATCY 2 cut(s) 754, 804
PvuII CAGCTG 3 cut(s) 152, 503, 1028
RsaI GTAC 3 cut(s) 140, 193, 325
RsaNI GTAC 3 cut(s) 139, 192, 324
RseI CAYNNNNRTG 1 cut(s) 684
SaqAI TTAA 5 cut(s) 225, 263, 552, 855, 1167
Sau3AI GATC 5 cut(s) 754, 804, 1081, 1147, 1261
Sau96I GGNCC 1 cut(s) 1022
SchI GAGTC 2 cut(s) 521, 1328
ScrFI CCNGG 3 cut(s) 297, 339, 893
SduI GDGCHC 1 cut(s) 1216
SfaNI GCATC 5 cut(s) 49, 713, 1118, 1201, 1384
SfcI CTRYAG 4 cut(s) 693, 876, 1206, 1314
SinI GGWCC 1 cut(s) 1022
SmiMI CAYNNNNRTG 1 cut(s) 684
SseBI AGGCCT 2 cut(s) 438, 778
SsiI CCGC 4 cut(s) 66, 1005, 1046, 1267
SspMI CTAG 3 cut(s) 888, 1187, 1398
StuI AGGCCT 2 cut(s) 438, 778
StyD4I CCNGG 3 cut(s) 295, 337, 891
StyI CCWWGG 1 cut(s) 600
TaaI ACNGT 5 cut(s) 191, 328, 400, 415, 1366
TaiI ACGT 1 cut(s) 1359
TfiI GAWTC 2 cut(s) 480, 674
Tru1I TTAA 5 cut(s) 225, 263, 552, 855, 1167
Tru9I TTAA 5 cut(s) 225, 263, 552, 855, 1167
TseFI GTSAC 2 cut(s) 584, 640
Tsp45I GTSAC 2 cut(s) 584, 640
TspDTI ATGAA 7 cut(s) 420, 501, 557, 738, 839, 941, 1259
VpaK11BI GGWCC 1 cut(s) 1022
XapI RAATTY 2 cut(s) 286, 713
XcmI CCANNNNNNNNNTGG 1 cut(s) 899
XmiI GTMKAC 1 cut(s) 869
XspI CTAG 3 cut(s) 888, 1187, 1398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.