Prupe.8G237800_v2.0.a1

Non-specific lipid-transfer protein-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
20969540 .. 20970755
1216 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G237800.1

Sequence Viewer

Length: 630 bp
ATGGAATTGTTCAAGGCTTTTCGCTTGATTACTATCCCAATTACCCTCTTAATCATTTCGCTAACGTCGATTAACGGGCAGATTAGCACGCCATGCACAGCCTCAATGATCAGCAACTTCACCCCATGCATAAATTATATCACTGGGAGCAGCAGCAATGGCACGTCACCACCAACACAGAGCTGTTGCAGTTCGGTAAAGTCGTTATTGGGCACCGGCACGGACTGTGCTTGCCTTCTCATAACTGCCAGTGTCCCAGTCCAACTGCCCATTAACCGAACCCTGGCGCTCTCTCTTCCTCGAGCTTGTAACATGGGGGGCATCCCATTACAGTGCAAAGCCTCTGCTAGTCCCTTAGCGGCTCCAGGTCCTGCCTTACTAGGGCCAACAGCTTCTTCTCCTTTAAGTCCGAGAGCTTCTAAGGCAGTGGCAGAATCTCCTACACCACAATCTGGGACAGCTGATGATCTGCAGCCAACATCTCCACCAGTAGAATCAGAAGCTCCAACACAATCTACTCCAGGGAGTGGTCGACTGACCCCATCACCATCAGCATCTACTCTATCTTATGTTTCCCCACCCTCTCTCCTACTCATAATTTTGGGACTCGTGGTTTATAAGTCCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

210

Amino Acids

21.26

Weight (kDa)

8.46

Isoelectric Point (pI)

57.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012814)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
AccB1I GGYRCC 1 cut(s) 212
AccB7I CCANNNNNTGG 2 cut(s) 452, 527
AccI GTMKAC 1 cut(s) 532
AciI CCGC 1 cut(s) 359
AfiI CCNNNNNNNGG 4 cut(s) 283, 381, 452, 527
AgsI TTSAA 1 cut(s) 13
AjiI CACGTC 1 cut(s) 165
AjnI CCWGG 3 cut(s) 282, 364, 520
AjuI GAANNNNNNNTTGG 2 cut(s) 379, 411
AluBI AGCT 6 cut(s) 183, 305, 392, 416, 461, 503
AluI AGCT 6 cut(s) 183, 305, 392, 416, 461, 503
AlwNI CAGNNNCTG 1 cut(s) 371
Ama87I CYCGRG 1 cut(s) 300
AoxI GGCC 1 cut(s) 383
ApeKI GCWGC 3 cut(s) 150, 153, 472
AspLEI GCGC 1 cut(s) 289
AspS9I GGNCC 2 cut(s) 368, 383
AsuHPI GGTGA 3 cut(s) 112, 159, 537
AvaI CYCGRG 1 cut(s) 300
AvaII GGWCC 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 215
BanI GGYRCC 1 cut(s) 212
BauI CACGAG 1 cut(s) 608
BbvI GCAGC 3 cut(s) 162, 165, 484
BccI CCATC 2 cut(s) 550, 556
BciT130I CCWGG 3 cut(s) 284, 366, 522
BclI TGATCA 1 cut(s) 108
BfaI CTAG 2 cut(s) 348, 380
BfmI CTRYAG 1 cut(s) 470
BfoI RGCGCY 1 cut(s) 290
BisI GCNGC 4 cut(s) 151, 154, 360, 473
BlsI GCNGC 4 cut(s) 152, 155, 361, 474
Bme1390I CCNGG 3 cut(s) 284, 366, 522
Bme18I GGWCC 1 cut(s) 368
BmeT110I CYCGRG 1 cut(s) 300
BmgBI CACGTC 1 cut(s) 165
BmgT120I GGNCC 2 cut(s) 368, 383
BmiI GGNNCC 2 cut(s) 214, 363
BmrFI CCNGG 3 cut(s) 284, 366, 522
BmrI ACTGGG 2 cut(s) 153, 251
BmsI GCATC 2 cut(s) 330, 563
BmuI ACTGGG 2 cut(s) 153, 251
BpmI CTGGAG 2 cut(s) 348, 504
Bpu10I CCTNAGC 1 cut(s) 355
BsaBI GATNNNNATC 1 cut(s) 32
BsaJI CCNNGG 2 cut(s) 282, 521
BsaXI ACNNNNNCTCC 2 cut(s) 570, 600
Bsc4I CCNNNNNNNGG 4 cut(s) 283, 381, 452, 527
Bse118I RCCGGY 1 cut(s) 215
Bse1I ACTGG 4 cut(s) 148, 249, 257, 488
Bse3DI GCAATG 1 cut(s) 163
Bse8I GATNNNNATC 1 cut(s) 32
BseBI CCWGG 3 cut(s) 284, 366, 522
BseDI CCNNGG 2 cut(s) 282, 521
BseGI GGATG 1 cut(s) 321
BseJI GATNNNNATC 1 cut(s) 32
BseLI CCNNNNNNNGG 4 cut(s) 283, 381, 452, 527
BseMI GCAATG 1 cut(s) 163
BseNI ACTGG 4 cut(s) 148, 249, 257, 488
BseSI GKGCMC 1 cut(s) 215
BseXI GCAGC 3 cut(s) 162, 165, 484
BshFI GGCC 1 cut(s) 385
BshNI GGYRCC 1 cut(s) 212
BsiHKCI CYCGRG 1 cut(s) 300
BsiSI CCGG 1 cut(s) 216
BslFI GGGAC 4 cut(s) 239, 336, 469, 618
BslI CCNNNNNNNGG 4 cut(s) 283, 381, 452, 527
BsmFI GGGAC 4 cut(s) 239, 336, 469, 618
BsnI GGCC 1 cut(s) 385
BsoBI CYCGRG 1 cut(s) 300
Bsp1286I GDGCHC 1 cut(s) 215
Bsp143I GATC 2 cut(s) 108, 466
BspACI CCGC 1 cut(s) 359
BspANI GGCC 1 cut(s) 385
BspLI GGNNCC 2 cut(s) 214, 363
BspMAI CTGCAG 1 cut(s) 474
BspT107I GGYRCC 1 cut(s) 212
BsrDI GCAATG 1 cut(s) 163
BsrFI RCCGGY 1 cut(s) 215
BsrI ACTGG 4 cut(s) 148, 249, 257, 488
BssAI RCCGGY 1 cut(s) 215
BssECI CCNNGG 2 cut(s) 282, 521
BssMI GATC 2 cut(s) 108, 466
BssSI CACGAG 1 cut(s) 608
Bst2BI CACGAG 1 cut(s) 608
Bst2UI CCWGG 3 cut(s) 284, 366, 522
Bst4CI ACNGT 2 cut(s) 227, 333
Bst6I CTCTTC 1 cut(s) 300
BstAPI GCANNNNNTGC 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 89, 232
BstDEI CTNAG 2 cut(s) 355, 420
BstF5I GGATG 1 cut(s) 321
BstH2I RGCGCY 1 cut(s) 290
BstHHI GCGC 1 cut(s) 289
BstKTI GATC 2 cut(s) 111, 469
BstMBI GATC 2 cut(s) 108, 466
BstMWI GCNNNNNNNGC 3 cut(s) 93, 159, 422
BstNI CCWGG 3 cut(s) 284, 366, 522
BstSCI CCNGG 3 cut(s) 282, 364, 520
BstSFI CTRYAG 1 cut(s) 470
BstSLI GKGCMC 1 cut(s) 215
BstV1I GCAGC 3 cut(s) 162, 165, 484
BsuRI GGCC 1 cut(s) 385
BtrI CACGTC 1 cut(s) 165
BtsCI GGATG 1 cut(s) 321
BtsI GCAGTG 1 cut(s) 432
BtsIMutI CAGTG 4 cut(s) 141, 256, 338, 432
Cac8I GCNNGC 2 cut(s) 89, 232
CaiI CAGNNNCTG 1 cut(s) 371
CfoI GCGC 1 cut(s) 289
Cfr10I RCCGGY 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 368, 383
CviAII CATG 3 cut(s) 93, 126, 313
DdeI CTNAG 2 cut(s) 355, 420
DpnI GATC 2 cut(s) 110, 468
DpnII GATC 2 cut(s) 108, 466
Eam1104I CTCTTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 300
Eco47I GGWCC 1 cut(s) 368
Eco88I CYCGRG 1 cut(s) 300
EcoO109I RGGNCCY 1 cut(s) 368
EcoRII CCWGG 3 cut(s) 282, 364, 520
EcoT22I ATGCAT 1 cut(s) 131
FaeI CATG 3 cut(s) 96, 129, 316
FaiI YATR 9 cut(s) 94, 127, 131, 138, 242, 314, 570, 596, 618
FaqI GGGAC 4 cut(s) 239, 336, 469, 618
FatI CATG 3 cut(s) 92, 125, 312
FbaI TGATCA 1 cut(s) 108
FblI GTMKAC 1 cut(s) 532
Fnu4HI GCNGC 4 cut(s) 151, 154, 360, 473
FokI GGATG 1 cut(s) 308
Fsp4HI GCNGC 4 cut(s) 151, 154, 360, 473
FspBI CTAG 2 cut(s) 348, 380
GlaI GCGC 1 cut(s) 288
GluI GCNGC 4 cut(s) 151, 154, 360, 473
GsuI CTGGAG 2 cut(s) 348, 504
HaeII RGCGCY 1 cut(s) 290
HaeIII GGCC 1 cut(s) 385
HapII CCGG 1 cut(s) 216
HhaI GCGC 1 cut(s) 289
Hin1II CATG 3 cut(s) 96, 129, 316
Hin6I GCGC 1 cut(s) 287
HinP1I GCGC 1 cut(s) 287
HincII GTYRAC 1 cut(s) 533
HindII GTYRAC 1 cut(s) 533
HinfI GANTC 3 cut(s) 434, 494, 606
HpaII CCGG 1 cut(s) 216
HphI GGTGA 3 cut(s) 112, 159, 537
Hpy166II GTNNAC 1 cut(s) 533
Hpy188I TCNGA 2 cut(s) 411, 499
Hpy8I GTNNAC 1 cut(s) 533
Hpy99I CGWCG 1 cut(s) 70
HpyAV CCTTC 1 cut(s) 245
HpyCH4III ACNGT 2 cut(s) 227, 333
HpyCH4IV ACGT 2 cut(s) 65, 164
HpyCH4V TGCA 5 cut(s) 96, 129, 189, 336, 472
HpyF10VI GCNNNNNNNGC 3 cut(s) 93, 159, 422
HpyF3I CTNAG 2 cut(s) 355, 420
HpySE526I ACGT 2 cut(s) 65, 164
Hsp92II CATG 3 cut(s) 96, 129, 316
HspAI GCGC 1 cut(s) 287
Ksp22I TGATCA 1 cut(s) 108
Kzo9I GATC 2 cut(s) 108, 466
LmnI GCTCC 3 cut(s) 147, 367, 508
Lsp1109I GCAGC 3 cut(s) 162, 165, 484
LweI GCATC 2 cut(s) 330, 563
MaeI CTAG 2 cut(s) 348, 380
MaeII ACGT 2 cut(s) 65, 164
MaeIII GTNAC 2 cut(s) 165, 308
MalI GATC 2 cut(s) 110, 468
MboI GATC 2 cut(s) 108, 466
MboII GAAGA 2 cut(s) 287, 387
MhlI GDGCHC 1 cut(s) 215
MluCI AATT 4 cut(s) 5, 39, 133, 597
MlyI GAGTC 1 cut(s) 600
MmeI TCCRAC 2 cut(s) 286, 530
MnlI CCTC 5 cut(s) 56, 112, 309, 352, 592
Mph1103I ATGCAT 1 cut(s) 131
MseI TTAA 4 cut(s) 50, 72, 273, 404
MslI CAYNNNNRTG 1 cut(s) 331
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 1 cut(s) 216
MspR9I CCNGG 3 cut(s) 284, 366, 522
MvaI CCWGG 3 cut(s) 284, 366, 522
MwoI GCNNNNNNNGC 3 cut(s) 93, 159, 422
NdeII GATC 2 cut(s) 108, 466
NlaIII CATG 3 cut(s) 96, 129, 316
NlaIV GGNNCC 2 cut(s) 214, 363
NmuCI GTSAC 1 cut(s) 165
NsiI ATGCAT 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 300
PcsI WCGNNNNNNNCGW 2 cut(s) 65, 200
PfeI GAWTC 2 cut(s) 434, 494
PflMI CCANNNNNTGG 2 cut(s) 452, 527
PkrI GCNGC 4 cut(s) 152, 155, 361, 474
PleI GAGTC 1 cut(s) 600
PpsI GAGTC 1 cut(s) 600
PpuMI RGGWCCY 1 cut(s) 368
PsiI TTATAA 1 cut(s) 618
Psp5II RGGWCCY 1 cut(s) 368
Psp6I CCWGG 3 cut(s) 282, 364, 520
PspGI CCWGG 3 cut(s) 282, 364, 520
PspN4I GGNNCC 2 cut(s) 214, 363
PspPI GGNCC 2 cut(s) 368, 383
PspPPI RGGWCCY 1 cut(s) 368
PspXI VCTCGAGB 1 cut(s) 300
PstI CTGCAG 1 cut(s) 474
PstNI CAGNNNCTG 1 cut(s) 371
PvuII CAGCTG 1 cut(s) 461
RseI CAYNNNNRTG 1 cut(s) 331
SalI GTCGAC 1 cut(s) 531
SaqAI TTAA 4 cut(s) 50, 72, 273, 404
SatI GCNGC 4 cut(s) 151, 154, 360, 473
Sau3AI GATC 2 cut(s) 108, 466
Sau96I GGNCC 2 cut(s) 368, 383
SchI GAGTC 1 cut(s) 600
ScrFI CCNGG 3 cut(s) 284, 366, 522
SduI GDGCHC 1 cut(s) 215
SetI ASST 9 cut(s) 68, 167, 185, 307, 370, 394, 418, 463, 505
SfaNI GCATC 2 cut(s) 330, 563
SfcI CTRYAG 1 cut(s) 470
Sfr274I CTCGAG 1 cut(s) 300
SinI GGWCC 1 cut(s) 368
SlaI CTCGAG 1 cut(s) 300
SmiMI CAYNNNNRTG 1 cut(s) 331
SmlI CTYRAG 1 cut(s) 300
SmoI CTYRAG 1 cut(s) 300
Sse9I AATT 4 cut(s) 5, 39, 133, 597
SsiI CCGC 1 cut(s) 359
SspMI CTAG 2 cut(s) 348, 380
StyD4I CCNGG 3 cut(s) 282, 364, 520
TaaI ACNGT 2 cut(s) 227, 333
TaiI ACGT 2 cut(s) 68, 167
TaqI TCGA 3 cut(s) 68, 301, 532
TasI AATT 4 cut(s) 5, 39, 133, 597
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 2 cut(s) 434, 494
Tru1I TTAA 4 cut(s) 50, 72, 273, 404
Tru9I TTAA 4 cut(s) 50, 72, 273, 404
TscAI CASTG 4 cut(s) 148, 256, 338, 432
TseFI GTSAC 1 cut(s) 165
TseI GCWGC 3 cut(s) 150, 153, 472
Tsp45I GTSAC 1 cut(s) 165
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 4 cut(s) 148, 256, 338, 432
Van91I CCANNNNNTGG 2 cut(s) 452, 527
VpaK11BI GGWCC 1 cut(s) 368
XhoI CTCGAG 1 cut(s) 300
XmiI GTMKAC 1 cut(s) 532
XspI CTAG 2 cut(s) 348, 380
Zsp2I ATGCAT 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.