f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02733 AT4G02735 AT4G02740 AT4G02740 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G08535 AT4G08535 AT4G08535 |
| fragaria_vesca | FvH4_2g23360 |
| malus_domestica | MD03G1263100.v1.1 MD11G1283900.v1.1 |
| prunus_persica | Prupe.8G239400_v2.0.a1 |
| pyrus_communis | pycom03g21060 pycom11g25130 |
| rosa_chinensis | RchiOBHm_Chr6g0290801 |
| rosa_laevigata | RLG00000012172 |
| rosa_multiflora | Rmu_ssc0000069.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00176720 |
| rosa_rugosa | Rorug06G0214800 |
| rosa_samantha | Rh6AG325500 Rh6BG333100 Rh6CG338700 Rh6DG326200 |
| rosa_wichuraiana | Rw6G028290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1131 |
| AbsI | CCTCGAGG | 1 cut(s) | 377 |
| AccI | GTMKAC | 1 cut(s) | 1698 |
| AccII | CGCG | 1 cut(s) | 351 |
| AciI | CCGC | 7 cut(s) | 132, 677, 813, 1267, 1435, 1472, 1481 |
| AclWI | GGATC | 6 cut(s) | 237, 533, 546, 691, 750, 786 |
| AcoI | YGGCCR | 1 cut(s) | 168 |
| AcsI | RAATTY | 1 cut(s) | 715 |
| AcuI | CTGAAG | 2 cut(s) | 620, 1169 |
| AcvI | CACGTG | 1 cut(s) | 68 |
| AdeI | CACNNNGTG | 1 cut(s) | 893 |
| AfaI | GTAC | 2 cut(s) | 1172, 1420 |
| AfeI | AGCGCT | 1 cut(s) | 392 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 765, 812, 928, 1110, 1434, 1487 |
| AflII | CTTAAG | 1 cut(s) | 644 |
| AflIII | ACRYGT | 1 cut(s) | 65 |
| AjnI | CCWGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 69, 101, 1322, 1354 |
| AluBI | AGCT | 7 cut(s) | 235, 340, 506, 623, 632, 649, 1686 |
| AluI | AGCT | 7 cut(s) | 235, 340, 506, 623, 632, 649, 1686 |
| Alw21I | GWGCWC | 2 cut(s) | 375, 829 |
| Alw26I | GTCTC | 1 cut(s) | 645 |
| AlwI | GGATC | 6 cut(s) | 237, 533, 546, 691, 750, 786 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 238, 318, 795 |
| Ama87I | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| Aor51HI | AGCGCT | 1 cut(s) | 392 |
| AoxI | GGCC | 7 cut(s) | 168, 435, 664, 906, 940, 1101, 1451 |
| ApaI | GGGCCC | 1 cut(s) | 439 |
| ApeKI | GCWGC | 5 cut(s) | 72, 383, 500, 503, 1298 |
| ApoI | RAATTY | 1 cut(s) | 715 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 275, 307 |
| AspLEI | GCGC | 3 cut(s) | 353, 393, 983 |
| AspS9I | GGNCC | 5 cut(s) | 315, 435, 436, 665, 1102 |
| AsuHPI | GGTGA | 5 cut(s) | 19, 26, 421, 445, 1044 |
| AvaI | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| AvaII | GGWCC | 1 cut(s) | 315 |
| BaeGI | GKGCMC | 1 cut(s) | 439 |
| BalI | TGGCCA | 1 cut(s) | 170 |
| BamHI | GGATCC | 1 cut(s) | 538 |
| BanII | GRGCYC | 2 cut(s) | 368, 439 |
| BbrPI | CACGTG | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 2 cut(s) | 375, 829 |
| BbvI | GCAGC | 5 cut(s) | 84, 370, 487, 515, 1285 |
| BccI | CCATC | 6 cut(s) | 287, 464, 716, 868, 1558, 1577 |
| BceAI | ACGGC | 2 cut(s) | 48, 1329 |
| BciT130I | CCWGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| BciVI | GTATCC | 1 cut(s) | 133 |
| BclI | TGATCA | 2 cut(s) | 1507, 1627 |
| BcoDI | GTCTC | 1 cut(s) | 645 |
| BfaI | CTAG | 1 cut(s) | 198 |
| BfmI | CTRYAG | 3 cut(s) | 501, 720, 1408 |
| BfoI | RGCGCY | 1 cut(s) | 394 |
| BfrI | CTTAAG | 1 cut(s) | 644 |
| BfuI | GTATCC | 1 cut(s) | 133 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 810 |
| BisI | GCNGC | 6 cut(s) | 73, 384, 501, 504, 677, 1299 |
| BlpI | GCTNAGC | 1 cut(s) | 387 |
| BlsI | GCNGC | 6 cut(s) | 74, 385, 502, 505, 678, 1300 |
| Bme1390I | CCNGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| Bme18I | GGWCC | 1 cut(s) | 315 |
| BmeT110I | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| BmgT120I | GGNCC | 5 cut(s) | 315, 435, 436, 665, 1102 |
| BmiI | GGNNCC | 3 cut(s) | 437, 540, 1220 |
| BmrFI | CCNGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| BmsI | GCATC | 7 cut(s) | 313, 1288, 1388, 1394, 1565, 1639, 1648 |
| BpmI | CTGGAG | 2 cut(s) | 813, 1224 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 387 |
| Bsa29I | ATCGAT | 1 cut(s) | 345 |
| BsaAI | YACGTR | 1 cut(s) | 68 |
| BsaBI | GATNNNNATC | 1 cut(s) | 327 |
| BsaJI | CCNNGG | 5 cut(s) | 30, 432, 534, 830, 1222 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 69, 99 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 765, 812, 928, 1110, 1434, 1487 |
| Bse1I | ACTGG | 3 cut(s) | 1104, 1207, 1397 |
| Bse3DI | GCAATG | 1 cut(s) | 965 |
| Bse8I | GATNNNNATC | 1 cut(s) | 327 |
| BseBI | CCWGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| BseCI | ATCGAT | 1 cut(s) | 345 |
| BseDI | CCNNGG | 5 cut(s) | 30, 432, 534, 830, 1222 |
| BseGI | GGATG | 5 cut(s) | 776, 879, 1187, 1577, 1654 |
| BseJI | GATNNNNATC | 1 cut(s) | 327 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 765, 812, 928, 1110, 1434, 1487 |
| BseMI | GCAATG | 1 cut(s) | 965 |
| BseMII | CTCAG | 4 cut(s) | 1120, 1374, 1599, 1701 |
| BseNI | ACTGG | 3 cut(s) | 1104, 1207, 1397 |
| BseRI | GAGGAG | 1 cut(s) | 365 |
| BseSI | GKGCMC | 1 cut(s) | 439 |
| BseXI | GCAGC | 5 cut(s) | 84, 370, 487, 515, 1285 |
| BseYI | CCCAGC | 2 cut(s) | 623, 1325 |
| Bsh1236I | CGCG | 1 cut(s) | 351 |
| Bsh1285I | CGRYCG | 1 cut(s) | 349 |
| BshFI | GGCC | 7 cut(s) | 170, 437, 666, 908, 942, 1103, 1453 |
| BshVI | ATCGAT | 1 cut(s) | 345 |
| BsiEI | CGRYCG | 1 cut(s) | 349 |
| BsiHKAI | GWGCWC | 2 cut(s) | 375, 829 |
| BsiHKCI | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| BslFI | GGGAC | 3 cut(s) | 29, 563, 847 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 765, 812, 928, 1110, 1434, 1487 |
| BsmAI | GTCTC | 1 cut(s) | 645 |
| BsmFI | GGGAC | 3 cut(s) | 29, 563, 847 |
| BsnI | GGCC | 7 cut(s) | 170, 437, 666, 908, 942, 1103, 1453 |
| BsoBI | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| Bsp120I | GGGCCC | 1 cut(s) | 435 |
| Bsp1286I | GDGCHC | 4 cut(s) | 368, 375, 439, 829 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 387 |
| Bsp19I | CCATGG | 1 cut(s) | 534 |
| BspACI | CCGC | 7 cut(s) | 132, 677, 813, 1267, 1435, 1472, 1481 |
| BspANI | GGCC | 7 cut(s) | 170, 437, 666, 908, 942, 1103, 1453 |
| BspCNI | CTCAG | 4 cut(s) | 1119, 1375, 1600, 1700 |
| BspDI | ATCGAT | 1 cut(s) | 345 |
| BspFNI | CGCG | 1 cut(s) | 351 |
| BspLI | GGNNCC | 3 cut(s) | 437, 540, 1220 |
| BspMAI | CTGCAG | 1 cut(s) | 505 |
| BspPI | GGATC | 6 cut(s) | 237, 533, 546, 691, 750, 786 |
| BspQI | GCTCTTC | 1 cut(s) | 639 |
| BspTI | CTTAAG | 1 cut(s) | 644 |
| BsrDI | GCAATG | 1 cut(s) | 965 |
| BsrI | ACTGG | 3 cut(s) | 1104, 1207, 1397 |
| BssECI | CCNNGG | 5 cut(s) | 30, 432, 534, 830, 1222 |
| BssT1I | CCWWGG | 1 cut(s) | 534 |
| Bst2UI | CCWGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| Bst4CI | ACNGT | 3 cut(s) | 574, 989, 1043 |
| Bst6I | CTCTTC | 1 cut(s) | 639 |
| BstAFI | CTTAAG | 1 cut(s) | 644 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 967, 1322 |
| BstBAI | YACGTR | 1 cut(s) | 68 |
| BstC8I | GCNNGC | 1 cut(s) | 1277 |
| BstDEI | CTNAG | 5 cut(s) | 387, 1106, 1383, 1608, 1687 |
| BstDSI | CCRYGG | 2 cut(s) | 30, 534 |
| BstF5I | GGATG | 5 cut(s) | 776, 879, 1187, 1577, 1654 |
| BstFNI | CGCG | 1 cut(s) | 351 |
| BstH2I | RGCGCY | 1 cut(s) | 394 |
| BstHHI | GCGC | 3 cut(s) | 353, 393, 983 |
| BstMAI | GTCTC | 1 cut(s) | 645 |
| BstMCI | CGRYCG | 1 cut(s) | 349 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 69, 78, 629, 810, 905, 967, 1322, 1658 |
| BstNI | CCWGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| BstNSI | RCATGY | 1 cut(s) | 1279 |
| BstSCI | CCNGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| BstSFI | CTRYAG | 3 cut(s) | 501, 720, 1408 |
| BstSLI | GKGCMC | 1 cut(s) | 439 |
| BstUI | CGCG | 1 cut(s) | 351 |
| BstV1I | GCAGC | 5 cut(s) | 84, 370, 487, 515, 1285 |
| BstX2I | RGATCY | 4 cut(s) | 538, 683, 755, 791 |
| BstYI | RGATCY | 4 cut(s) | 538, 683, 755, 791 |
| Bsu15I | ATCGAT | 1 cut(s) | 345 |
| BsuI | GTATCC | 1 cut(s) | 133 |
| BsuRI | GGCC | 7 cut(s) | 170, 437, 666, 908, 942, 1103, 1453 |
| BsuTUI | ATCGAT | 1 cut(s) | 345 |
| BtgI | CCRYGG | 2 cut(s) | 30, 534 |
| BtgZI | GCGATG | 2 cut(s) | 336, 1542 |
| BtsCI | GGATG | 5 cut(s) | 776, 879, 1187, 1577, 1654 |
| BtsIMutI | CAGTG | 2 cut(s) | 1097, 1200 |
| Cac8I | GCNNGC | 1 cut(s) | 1277 |
| CaiI | CAGNNNCTG | 3 cut(s) | 238, 318, 795 |
| CfoI | GCGC | 3 cut(s) | 353, 393, 983 |
| Cfr13I | GGNCC | 5 cut(s) | 315, 435, 436, 665, 1102 |
| ClaI | ATCGAT | 1 cut(s) | 345 |
| CseI | GACGC | 1 cut(s) | 992 |
| Csp6I | GTAC | 2 cut(s) | 1171, 1419 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1219, 1254 |
| CviAII | CATG | 6 cut(s) | 472, 535, 741, 1124, 1276, 1631 |
| CviQI | GTAC | 2 cut(s) | 1171, 1419 |
| DdeI | CTNAG | 5 cut(s) | 387, 1106, 1383, 1608, 1687 |
| DraIII | CACNNNGTG | 1 cut(s) | 893 |
| EaeI | YGGCCR | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 639 |
| EarI | CTCTTC | 1 cut(s) | 639 |
| EciI | GGCGGA | 2 cut(s) | 1470, 1487 |
| Eco130I | CCWWGG | 1 cut(s) | 534 |
| Eco147I | AGGCCT | 1 cut(s) | 1453 |
| Eco24I | GRGCYC | 2 cut(s) | 368, 439 |
| Eco32I | GATATC | 2 cut(s) | 22, 1540 |
| Eco47I | GGWCC | 1 cut(s) | 315 |
| Eco47III | AGCGCT | 1 cut(s) | 392 |
| Eco57I | CTGAAG | 2 cut(s) | 620, 1169 |
| Eco72I | CACGTG | 1 cut(s) | 68 |
| Eco88I | CYCGRG | 4 cut(s) | 251, 305, 377, 1653 |
| EcoO109I | RGGNCCY | 2 cut(s) | 315, 436 |
| EcoRI | GAATTC | 1 cut(s) | 715 |
| EcoRII | CCWGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| EcoRV | GATATC | 2 cut(s) | 22, 1540 |
| EcoT14I | CCWWGG | 1 cut(s) | 534 |
| EcoT22I | ATGCAT | 1 cut(s) | 1281 |
| EcoT38I | GRGCYC | 2 cut(s) | 368, 439 |
| ErhI | CCWWGG | 1 cut(s) | 534 |
| FaeI | CATG | 6 cut(s) | 475, 538, 744, 1127, 1279, 1634 |
| FaqI | GGGAC | 3 cut(s) | 29, 563, 847 |
| FatI | CATG | 6 cut(s) | 471, 534, 740, 1123, 1275, 1630 |
| FauI | CCCGC | 4 cut(s) | 139, 806, 1260, 1428 |
| FbaI | TGATCA | 2 cut(s) | 1507, 1627 |
| FblI | GTMKAC | 1 cut(s) | 1698 |
| Fnu4HI | GCNGC | 6 cut(s) | 73, 384, 501, 504, 677, 1299 |
| FokI | GGATG | 5 cut(s) | 763, 886, 1174, 1564, 1661 |
| FriOI | GRGCYC | 2 cut(s) | 368, 439 |
| Fsp4HI | GCNGC | 6 cut(s) | 73, 384, 501, 504, 677, 1299 |
| FspBI | CTAG | 1 cut(s) | 198 |
| GlaI | GCGC | 3 cut(s) | 352, 392, 982 |
| GluI | GCNGC | 6 cut(s) | 73, 384, 501, 504, 677, 1299 |
| GsaI | CCCAGC | 2 cut(s) | 627, 1329 |
| GsuI | CTGGAG | 2 cut(s) | 813, 1224 |
| HaeII | RGCGCY | 1 cut(s) | 394 |
| HaeIII | GGCC | 7 cut(s) | 170, 437, 666, 908, 942, 1103, 1453 |
| HgaI | GACGC | 1 cut(s) | 992 |
| HhaI | GCGC | 3 cut(s) | 353, 393, 983 |
| Hin1II | CATG | 6 cut(s) | 475, 538, 744, 1127, 1279, 1634 |
| Hin6I | GCGC | 3 cut(s) | 351, 391, 981 |
| HinP1I | GCGC | 3 cut(s) | 351, 391, 981 |
| HincII | GTYRAC | 1 cut(s) | 589 |
| HindII | GTYRAC | 1 cut(s) | 589 |
| HindIII | AAGCTT | 1 cut(s) | 647 |
| HinfI | GANTC | 8 cut(s) | 201, 263, 308, 613, 773, 835, 1016, 1243 |
| HpaI | GTTAAC | 1 cut(s) | 589 |
| HphI | GGTGA | 5 cut(s) | 19, 26, 421, 445, 1044 |
| Hpy166II | GTNNAC | 2 cut(s) | 589, 1699 |
| Hpy188III | TCNNGA | 8 cut(s) | 239, 251, 305, 446, 712, 929, 1352, 1655 |
| Hpy8I | GTNNAC | 2 cut(s) | 589, 1699 |
| HpyAV | CCTTC | 8 cut(s) | 552, 763, 840, 953, 1144, 1364, 1481, 1584 |
| HpyCH4III | ACNGT | 3 cut(s) | 574, 989, 1043 |
| HpyCH4IV | ACGT | 5 cut(s) | 67, 884, 948, 1094, 1173 |
| HpyCH4V | TGCA | 7 cut(s) | 503, 596, 853, 970, 1123, 1275, 1279 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 69, 78, 629, 810, 905, 967, 1322, 1658 |
| HpyF3I | CTNAG | 5 cut(s) | 387, 1106, 1383, 1608, 1687 |
| HpySE526I | ACGT | 5 cut(s) | 67, 884, 948, 1094, 1173 |
| Hsp92II | CATG | 6 cut(s) | 475, 538, 744, 1127, 1279, 1634 |
| HspAI | GCGC | 3 cut(s) | 351, 391, 981 |
| Ksp22I | TGATCA | 2 cut(s) | 1507, 1627 |
| KspAI | GTTAAC | 1 cut(s) | 589 |
| LguI | GCTCTTC | 1 cut(s) | 639 |
| LmnI | GCTCC | 3 cut(s) | 378, 832, 1205 |
| Lsp1109I | GCAGC | 5 cut(s) | 84, 370, 487, 515, 1285 |
| LweI | GCATC | 7 cut(s) | 313, 1288, 1388, 1394, 1565, 1639, 1648 |
| MaeI | CTAG | 1 cut(s) | 198 |
| MaeII | ACGT | 5 cut(s) | 67, 884, 948, 1094, 1173 |
| MaeIII | GTNAC | 6 cut(s) | 25, 885, 989, 1095, 1493, 1616 |
| MboII | GAAGA | 3 cut(s) | 626, 1011, 1457 |
| MfeI | CAATTG | 2 cut(s) | 218, 359 |
| MflI | RGATCY | 4 cut(s) | 538, 683, 755, 791 |
| MhlI | GDGCHC | 4 cut(s) | 368, 375, 439, 829 |
| MlsI | TGGCCA | 1 cut(s) | 170 |
| MluCI | AATT | 8 cut(s) | 218, 359, 715, 933, 953, 1163, 1260, 1422 |
| MluNI | TGGCCA | 1 cut(s) | 170 |
| MlyI | GAGTC | 4 cut(s) | 257, 317, 782, 829 |
| MmeI | TCCRAC | 2 cut(s) | 756, 1422 |
| Mox20I | TGGCCA | 1 cut(s) | 170 |
| Mph1103I | ATGCAT | 1 cut(s) | 1281 |
| MscI | TGGCCA | 1 cut(s) | 170 |
| MseI | TTAA | 9 cut(s) | 213, 588, 645, 800, 1116, 1166, 1214, 1259, 1344 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1635 |
| Msp20I | TGGCCA | 1 cut(s) | 170 |
| MspCI | CTTAAG | 1 cut(s) | 644 |
| MspR9I | CCNGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| MunI | CAATTG | 2 cut(s) | 218, 359 |
| MvaI | CCWGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| MvnI | CGCG | 1 cut(s) | 351 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 69, 78, 629, 810, 905, 967, 1322, 1658 |
| NcoI | CCATGG | 1 cut(s) | 534 |
| NlaIII | CATG | 6 cut(s) | 475, 538, 744, 1127, 1279, 1634 |
| NlaIV | GGNNCC | 3 cut(s) | 437, 540, 1220 |
| NmeAIII | GCCGAG | 1 cut(s) | 93 |
| NmuCI | GTSAC | 4 cut(s) | 25, 885, 989, 1095 |
| NsiI | ATGCAT | 1 cut(s) | 1281 |
| NspI | RCATGY | 1 cut(s) | 1279 |
| PaeI | GCATGC | 1 cut(s) | 1279 |
| PaeR7I | CTCGAG | 4 cut(s) | 251, 305, 377, 1653 |
| PceI | AGGCCT | 1 cut(s) | 1453 |
| PciSI | GCTCTTC | 1 cut(s) | 639 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 85 |
| PfeI | GAWTC | 4 cut(s) | 201, 613, 1016, 1243 |
| PkrI | GCNGC | 6 cut(s) | 74, 385, 502, 505, 678, 1300 |
| Ple19I | CGATCG | 1 cut(s) | 349 |
| PleI | GAGTC | 4 cut(s) | 257, 316, 781, 829 |
| PmaCI | CACGTG | 1 cut(s) | 68 |
| PmlI | CACGTG | 1 cut(s) | 68 |
| PpsI | GAGTC | 4 cut(s) | 257, 316, 781, 829 |
| Ppu21I | YACGTR | 1 cut(s) | 68 |
| PpuMI | RGGWCCY | 1 cut(s) | 315 |
| PsiI | TTATAA | 1 cut(s) | 1131 |
| Psp5II | RGGWCCY | 1 cut(s) | 315 |
| Psp6I | CCWGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| PspCI | CACGTG | 1 cut(s) | 68 |
| PspFI | CCCAGC | 2 cut(s) | 623, 1325 |
| PspGI | CCWGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| PspN4I | GGNNCC | 3 cut(s) | 437, 540, 1220 |
| PspOMI | GGGCCC | 1 cut(s) | 435 |
| PspPI | GGNCC | 5 cut(s) | 315, 435, 436, 665, 1102 |
| PspPPI | RGGWCCY | 1 cut(s) | 315 |
| PspXI | VCTCGAGB | 1 cut(s) | 377 |
| PstI | CTGCAG | 1 cut(s) | 505 |
| PstNI | CAGNNNCTG | 3 cut(s) | 238, 318, 795 |
| PsuI | RGATCY | 4 cut(s) | 538, 683, 755, 791 |
| PvuI | CGATCG | 1 cut(s) | 349 |
| RsaI | GTAC | 2 cut(s) | 1172, 1420 |
| RsaNI | GTAC | 2 cut(s) | 1171, 1419 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1635 |
| SapI | GCTCTTC | 1 cut(s) | 639 |
| SaqAI | TTAA | 9 cut(s) | 213, 588, 645, 800, 1116, 1166, 1214, 1259, 1344 |
| SatI | GCNGC | 6 cut(s) | 73, 384, 501, 504, 677, 1299 |
| Sau96I | GGNCC | 5 cut(s) | 315, 435, 436, 665, 1102 |
| SchI | GAGTC | 4 cut(s) | 257, 317, 782, 829 |
| ScrFI | CCNGG | 5 cut(s) | 313, 433, 663, 760, 831 |
| SduI | GDGCHC | 4 cut(s) | 368, 375, 439, 829 |
| SfaNI | GCATC | 7 cut(s) | 313, 1288, 1388, 1394, 1565, 1639, 1648 |
| SfcI | CTRYAG | 3 cut(s) | 501, 720, 1408 |
| Sfr274I | CTCGAG | 4 cut(s) | 251, 305, 377, 1653 |
| SinI | GGWCC | 1 cut(s) | 315 |
| SlaI | CTCGAG | 4 cut(s) | 251, 305, 377, 1653 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1635 |
| SmlI | CTYRAG | 5 cut(s) | 251, 305, 377, 644, 1653 |
| SmoI | CTYRAG | 5 cut(s) | 251, 305, 377, 644, 1653 |
| SphI | GCATGC | 1 cut(s) | 1279 |
| Sse9I | AATT | 8 cut(s) | 218, 359, 715, 933, 953, 1163, 1260, 1422 |
| SseBI | AGGCCT | 1 cut(s) | 1453 |
| SsiI | CCGC | 7 cut(s) | 132, 677, 813, 1267, 1435, 1472, 1481 |
| SspI | AATATT | 2 cut(s) | 559, 865 |
| SspMI | CTAG | 1 cut(s) | 198 |
| StuI | AGGCCT | 1 cut(s) | 1453 |
| StyD4I | CCNGG | 5 cut(s) | 311, 431, 661, 758, 829 |
| StyI | CCWWGG | 1 cut(s) | 534 |
| TaaI | ACNGT | 3 cut(s) | 574, 989, 1043 |
| TaiI | ACGT | 5 cut(s) | 70, 887, 951, 1097, 1176 |
| TaqI | TCGA | 6 cut(s) | 252, 282, 306, 345, 378, 1654 |
| TasI | AATT | 8 cut(s) | 218, 359, 715, 933, 953, 1163, 1260, 1422 |
| TatI | WGTACW | 1 cut(s) | 1418 |
| TauI | GCSGC | 1 cut(s) | 679 |
| TfiI | GAWTC | 4 cut(s) | 201, 613, 1016, 1243 |
| Tru1I | TTAA | 9 cut(s) | 213, 588, 645, 800, 1116, 1166, 1214, 1259, 1344 |
| Tru9I | TTAA | 9 cut(s) | 213, 588, 645, 800, 1116, 1166, 1214, 1259, 1344 |
| TscAI | CASTG | 2 cut(s) | 1104, 1207 |
| TseFI | GTSAC | 4 cut(s) | 25, 885, 989, 1095 |
| TseI | GCWGC | 5 cut(s) | 72, 383, 500, 503, 1298 |
| Tsp45I | GTSAC | 4 cut(s) | 25, 885, 989, 1095 |
| TspDTI | ATGAA | 3 cut(s) | 729, 1566, 1695 |
| TspGWI | ACGGA | 2 cut(s) | 77, 769 |
| TspRI | CASTG | 2 cut(s) | 1104, 1207 |
| Vha464I | CTTAAG | 1 cut(s) | 644 |
| VpaK11BI | GGWCC | 1 cut(s) | 315 |
| XapI | RAATTY | 1 cut(s) | 715 |
| XceI | RCATGY | 1 cut(s) | 1279 |
| XhoI | CTCGAG | 4 cut(s) | 251, 305, 377, 1653 |
| XmiI | GTMKAC | 1 cut(s) | 1698 |
| XspI | CTAG | 1 cut(s) | 198 |
| Zsp2I | ATGCAT | 1 cut(s) | 1281 |