Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0004316

Physical Location & Seq

Genomic Coordinates Forward (+)

21401955 .. 21405450

Gene Structure 3496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g21060.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGATACCCTGCTGCACAGCCCGTCATCCATGGCGAAGCGACCCTGCCCCTCCCAAAACCCTAGAACCCCAAACCTCAACCAGCTCGATCGTGACCACCTCCTCGACACATTTCTCGAGTTCTCCGACTCCCCGCCCTTCGCCATCGACCTCTCCTTCGAGCGCCTCCTCGAGTCACGGGCCTCCGACGCCGATCAGACCAAGCTCATCGATCGCGCCCTCCAATTGGGCTCCGTCCTCCTCGAGGCGGCCAAGCGCTCCGCCAGGAAGCGCGCCTCCAAGCACAACTCGCTCGCCTGGGTTCTTCCTCCCGACCTTACTATCAAGGTCTTTTCCATGCTTGATACACAAAGCCTATGCTATGCTGCTGCTACTTGTTCAATGTTTAATAAGTGTGCCATGGATTCCTCTTGCTACGCCAATATTGACTTGACAACAGTTGTCCCAAAAGTTAACAATGCAGTAGTTTCCACAATGATTCACCGAGCAGGGAAATCTCTCCAGTCTCTTAAGCTTGGGGTAGTTCCAGGCCCAACTACGCCAATTGGATCTTGTCAACCGTTAGTTTATACCATCAGGAATTCTGTAGATGTATCCAACTTTTCATGGAATGATAAGAGATCCCGACAAGGGAAGGAGTCATCGATTCTTAGTAGGTCCTGTTTAAGCCCTTTAGGCGCGAACAATGGTGCTCCAGGGATTCTTCTAAGAAGGTTGCACCTTTACAGTATTGAAAGAATGGACAATACGTCACTCTCTGGGGCCCTAGGTGCTTGCCCATTTCTTGTTGATTTGGAGATTGTTGGCCTTCACGTTGAATTGAGGCAAACACTGCTGTCAGTGAGTGCAAACTGTCAATCAATAGAGCGTCTGTTCTTTGAATCTTCAAAATCAGGTAGAGATGACAGTTTGAAATCACCAACTTGTGTTGATCTGGTGAACAATTGCCCTCATCTAACATCATTGGCCCTCAGAGGGTTTAAGTTACATGATTATAAAGTTCGTATACTTCTTAAGGGATTTAAGAAATTAAAGTACGTTGATTTTTCGACTTCCTACTCGATCACTGGATCATTTTTAAGGAACCTTGGAAGCAGCACAGGTGGGAATCTGCTGGAAGTCTTGATTCTACGGGATTGCATGCATCTCAAAATGGTGGAGGCGACTCGGTTGTTGACAGCTGTTCTTGCTGGGGATTTCAAGTTCCTTAGACATCTTGATATATCTAACAGAGAAGGTTTGGCATCTGAGGATGACTGGATTCAGAGATGCCACACCTTAAGCACCATTCCCTTGAAGCAGGTGTTAGAAGAAAGGCCTAATCTCTGTCTGCTGGCTGAGCTTCCACCAGAAGGAAGTTACCCCGACATGGACCCAATGTTTGACAGTGAGCCATATAGTGATATCAGTCTGCCATCGGCATCGCAGATGAGTAGTCCTTTATCTGATGGTTCAATGTTTGTGAGTTTTTCTGAGAGCAGTTACAATAGCGATCATGGCAGTGGCAACGAGGATGCTCGAGATGTTGGTTATGTAATTTATGATGAAAGCTCAGACGAGGTGGACTATGTGGCCGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box-like

Protein Analysis

527

Amino Acids

57.97

Weight (kDa)

5.88

Isoelectric Point (pI)

49.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004316)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02733 AT4G02735 AT4G02740 AT4G02740 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G08535 AT4G08535 AT4G08535
fragaria_vesca	FvH4_2g23360
malus_domestica	MD03G1263100.v1.1 MD11G1283900.v1.1
prunus_persica	Prupe.8G239400_v2.0.a1
pyrus_communis	pycom03g21060 pycom11g25130
rosa_chinensis	RchiOBHm_Chr6g0290801
rosa_laevigata	RLG00000012172
rosa_multiflora	Rmu_ssc0000069.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176720
rosa_rugosa	Rorug06G0214800
rosa_samantha	Rh6AG325500 Rh6BG333100 Rh6CG338700 Rh6DG326200
rosa_wichuraiana	Rw6G028290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	996
AarI	CACCTGC	1 cut(s)	1291
AbsI	CCTCGAGG	1 cut(s)	242
Acc36I	ACCTGC	1 cut(s)	1291
AccI	GTMKAC	1 cut(s)	1006
AccII	CGCG	3 cut(s)	216, 273, 680
AciI	CCGC	3 cut(s)	134, 248, 261
AclWI	GGATC	3 cut(s)	556, 615, 1078
AcoI	YGGCCR	2 cut(s)	249, 1572
AcsI	RAATTY	1 cut(s)	580
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	1 cut(s)	1037
AfeI	AGCGCT	1 cut(s)	257
AfiI	CCNNNNNNNGG	7 cut(s)	226, 244, 247, 630, 975, 1352, 1369
AflII	CTTAAG	3 cut(s)	509, 1013, 1279
AgsI	TTSAA	9 cut(s)	381, 734, 818, 881, 888, 913, 1201, 1297, 1455
AhdI	GACNNNNNGTC	1 cut(s)	748
AjnI	CCWGG	4 cut(s)	263, 296, 526, 694
AloI	GAACNNNNNNTCC	2 cut(s)	1187, 1219
AluBI	AGCT	6 cut(s)	85, 205, 514, 1181, 1342, 1551
AluI	AGCT	6 cut(s)	85, 205, 514, 1181, 1342, 1551
Alw21I	GWGCWC	1 cut(s)	694
Alw26I	GTCTC	1 cut(s)	510
AlwI	GGATC	3 cut(s)	556, 615, 1078
Ama87I	CYCGRG	4 cut(s)	116, 170, 242, 1518
Aor51HI	AGCGCT	1 cut(s)	257
AoxI	GGCC	8 cut(s)	180, 249, 529, 762, 805, 966, 1316, 1572
ApaI	GGGCCC	1 cut(s)	766
ApeKI	GCWGC	4 cut(s)	13, 365, 368, 1095
ApoI	RAATTY	1 cut(s)	580
ArsI	GACNNNNNNTTYG	4 cut(s)	140, 172, 1364, 1396
AspA2I	CCTAGG	1 cut(s)	766
AspLEI	GCGC	6 cut(s)	165, 218, 258, 273, 275, 680
AspS9I	GGNCC	7 cut(s)	180, 530, 657, 762, 763, 967, 1372
AsuHPI	GGTGA	3 cut(s)	473, 909, 949
AvaI	CYCGRG	4 cut(s)	116, 170, 242, 1518
AvaII	GGWCC	2 cut(s)	657, 1372
AvrII	CCTAGG	1 cut(s)	766
BaeGI	GKGCMC	1 cut(s)	766
BanII	GRGCYC	2 cut(s)	233, 766
Bbv12I	GWGCWC	1 cut(s)	694
BbvI	GCAGC	3 cut(s)	352, 355, 1107
BccI	CCATC	4 cut(s)	152, 581, 1423, 1442
BceAI	ACGGC	1 cut(s)	1559
BciT130I	CCWGG	4 cut(s)	265, 298, 528, 696
BciVI	GTATCC	1 cut(s)	604
BcoDI	GTCTC	1 cut(s)	510
BfaI	CTAG	2 cut(s)	63, 767
BfmI	CTRYAG	1 cut(s)	585
BfoI	RGCGCY	2 cut(s)	166, 259
BfrI	CTTAAG	3 cut(s)	509, 1013, 1279
BfuAI	ACCTGC	1 cut(s)	1291
BfuI	GTATCC	1 cut(s)	604
BglI	GCCNNNNNGGC	1 cut(s)	675
BisI	GCNGC	5 cut(s)	14, 249, 366, 369, 1096
BlnI	CCTAGG	1 cut(s)	766
BlpI	GCTNAGC	1 cut(s)	1338
BlsI	GCNGC	5 cut(s)	15, 250, 367, 370, 1097
Bme1390I	CCNGG	4 cut(s)	265, 298, 528, 696
Bme18I	GGWCC	2 cut(s)	657, 1372
BmeRI	GACNNNNNGTC	1 cut(s)	748
BmeT110I	CYCGRG	4 cut(s)	116, 170, 242, 1518
BmgT120I	GGNCC	7 cut(s)	180, 530, 657, 762, 763, 967, 1372
BmiI	GGNNCC	5 cut(s)	232, 763, 764, 1085, 1374
BmrFI	CCNGG	4 cut(s)	265, 298, 528, 696
BmsI	GCATC	5 cut(s)	1153, 1253, 1259, 1430, 1504
BpmI	CTGGAG	2 cut(s)	485, 678
Bpu1102I	GCTNAGC	1 cut(s)	1338
Bsa29I	ATCGAT	2 cut(s)	210, 644
BsaHI	GRCGYC	1 cut(s)	189
BsaJI	CCNNGG	6 cut(s)	30, 297, 399, 695, 766, 1087
Bsc4I	CCNNNNNNNGG	7 cut(s)	226, 244, 247, 630, 975, 1352, 1369
Bse1I	ACTGG	3 cut(s)	502, 1072, 1262
BseBI	CCWGG	4 cut(s)	265, 298, 528, 696
BseCI	ATCGAT	2 cut(s)	210, 644
BseDI	CCNNGG	6 cut(s)	30, 297, 399, 695, 766, 1087
BseGI	GGATG	3 cut(s)	26, 1258, 1519
BseLI	CCNNNNNNNGG	7 cut(s)	226, 244, 247, 630, 975, 1352, 1369
BseMII	CTCAG	5 cut(s)	985, 1239, 1329, 1464, 1566
BseNI	ACTGG	3 cut(s)	502, 1072, 1262
BsePI	GCGCGC	1 cut(s)	271
BseRI	GAGGAG	3 cut(s)	92, 158, 230
BseSI	GKGCMC	1 cut(s)	766
BseXI	GCAGC	3 cut(s)	352, 355, 1107
BseYI	CCCAGC	1 cut(s)	1190
Bsh1236I	CGCG	3 cut(s)	216, 273, 680
Bsh1285I	CGRYCG	2 cut(s)	91, 214
BshFI	GGCC	8 cut(s)	182, 251, 531, 764, 807, 968, 1318, 1574
BshVI	ATCGAT	2 cut(s)	210, 644
BsiEI	CGRYCG	2 cut(s)	91, 214
BsiHKAI	GWGCWC	1 cut(s)	694
BsiHKCI	CYCGRG	4 cut(s)	116, 170, 242, 1518
BslFI	GGGAC	1 cut(s)	428
BslI	CCNNNNNNNGG	7 cut(s)	226, 244, 247, 630, 975, 1352, 1369
BsmAI	GTCTC	1 cut(s)	510
BsmFI	GGGAC	1 cut(s)	428
BsnI	GGCC	8 cut(s)	182, 251, 531, 764, 807, 968, 1318, 1574
BsoBI	CYCGRG	4 cut(s)	116, 170, 242, 1518
Bsp120I	GGGCCC	1 cut(s)	762
Bsp1286I	GDGCHC	3 cut(s)	233, 694, 766
Bsp143I	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
Bsp1720I	GCTNAGC	1 cut(s)	1338
Bsp19I	CCATGG	2 cut(s)	30, 399
BspACI	CCGC	3 cut(s)	134, 248, 261
BspANI	GGCC	8 cut(s)	182, 251, 531, 764, 807, 968, 1318, 1574
BspCNI	CTCAG	5 cut(s)	984, 1240, 1330, 1465, 1565
BspDI	ATCGAT	2 cut(s)	210, 644
BspFNI	CGCG	3 cut(s)	216, 273, 680
BspLI	GGNNCC	5 cut(s)	232, 763, 764, 1085, 1374
BspMI	ACCTGC	1 cut(s)	1291
BspPI	GGATC	3 cut(s)	556, 615, 1078
BspTI	CTTAAG	3 cut(s)	509, 1013, 1279
BsrI	ACTGG	3 cut(s)	502, 1072, 1262
BssECI	CCNNGG	6 cut(s)	30, 297, 399, 695, 766, 1087
BssHII	GCGCGC	1 cut(s)	271
BssMI	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
BssNAI	GTATAC	1 cut(s)	1007
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	4 cut(s)	30, 399, 766, 1087
Bst1107I	GTATAC	1 cut(s)	1007
Bst2UI	CCWGG	4 cut(s)	265, 298, 528, 696
Bst4CI	ACNGT	6 cut(s)	439, 561, 728, 854, 908, 1388
BstACI	GRCGYC	1 cut(s)	189
BstAFI	CTTAAG	3 cut(s)	509, 1013, 1279
BstAPI	GCANNNNNTGC	1 cut(s)	832
BstC8I	GCNNGC	5 cut(s)	273, 294, 775, 1142, 1335
BstDEI	CTNAG	8 cut(s)	650, 707, 971, 1208, 1248, 1338, 1473, 1552
BstDSI	CCRYGG	2 cut(s)	30, 399
BstENI	CCTNNNNNAGG	1 cut(s)	242
BstF5I	GGATG	3 cut(s)	26, 1258, 1519
BstFNI	CGCG	3 cut(s)	216, 273, 680
BstH2I	RGCGCY	2 cut(s)	166, 259
BstHHI	GCGC	6 cut(s)	165, 218, 258, 273, 275, 680
BstKTI	GATC	9 cut(s)	91, 196, 214, 551, 623, 934, 1065, 1073, 1495
BstMAI	GTCTC	1 cut(s)	510
BstMBI	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
BstMCI	CGRYCG	2 cut(s)	91, 214
BstMWI	GCNNNNNNNGC	8 cut(s)	188, 289, 675, 770, 832, 1187, 1339, 1497
BstNI	CCWGG	4 cut(s)	265, 298, 528, 696
BstNSI	RCATGY	1 cut(s)	1144
BstSCI	CCNGG	4 cut(s)	263, 296, 526, 694
BstSFI	CTRYAG	1 cut(s)	585
BstSLI	GKGCMC	1 cut(s)	766
BstUI	CGCG	3 cut(s)	216, 273, 680
BstV1I	GCAGC	3 cut(s)	352, 355, 1107
BstX2I	RGATCY	2 cut(s)	548, 620
BstYI	RGATCY	2 cut(s)	548, 620
BstZ17I	GTATAC	1 cut(s)	1007
Bsu15I	ATCGAT	2 cut(s)	210, 644
BsuI	GTATCC	1 cut(s)	604
BsuRI	GGCC	8 cut(s)	182, 251, 531, 764, 807, 968, 1318, 1574
BsuTUI	ATCGAT	2 cut(s)	210, 644
BtgI	CCRYGG	2 cut(s)	30, 399
BtgZI	GCGATG	1 cut(s)	1407
BtsCI	GGATG	3 cut(s)	26, 1258, 1519
BtsI	GCAGTG	2 cut(s)	830, 1507
BtsIMutI	CAGTG	5 cut(s)	830, 846, 1065, 1393, 1507
BveI	ACCTGC	1 cut(s)	1291
Cac8I	GCNNGC	5 cut(s)	273, 294, 775, 1142, 1335
CfoI	GCGC	6 cut(s)	165, 218, 258, 273, 275, 680
Cfr13I	GGNCC	7 cut(s)	180, 530, 657, 762, 763, 967, 1372
ClaI	ATCGAT	2 cut(s)	210, 644
CseI	GACGC	2 cut(s)	197, 857
Csp6I	GTAC	1 cut(s)	1036
CviAII	CATG	8 cut(s)	31, 337, 400, 606, 989, 1141, 1369, 1496
CviQI	GTAC	1 cut(s)	1036
DdeI	CTNAG	8 cut(s)	650, 707, 971, 1208, 1248, 1338, 1473, 1552
DpnI	GATC	9 cut(s)	90, 195, 213, 550, 622, 933, 1064, 1072, 1494
DpnII	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
DriI	GACNNNNNGTC	1 cut(s)	748
EaeI	YGGCCR	2 cut(s)	249, 1572
Eam1105I	GACNNNNNGTC	1 cut(s)	748
EciI	GGCGGA	1 cut(s)	250
Eco130I	CCWWGG	4 cut(s)	30, 399, 766, 1087
Eco147I	AGGCCT	1 cut(s)	1318
Eco24I	GRGCYC	2 cut(s)	233, 766
Eco32I	GATATC	1 cut(s)	1405
Eco47I	GGWCC	2 cut(s)	657, 1372
Eco47III	AGCGCT	1 cut(s)	257
Eco88I	CYCGRG	4 cut(s)	116, 170, 242, 1518
EcoNI	CCTNNNNNAGG	1 cut(s)	242
EcoO109I	RGGNCCY	3 cut(s)	657, 762, 763
EcoRI	GAATTC	1 cut(s)	580
EcoRII	CCWGG	4 cut(s)	263, 296, 526, 694
EcoRV	GATATC	1 cut(s)	1405
EcoT14I	CCWWGG	4 cut(s)	30, 399, 766, 1087
EcoT22I	ATGCAT	1 cut(s)	1146
EcoT38I	GRGCYC	2 cut(s)	233, 766
ErhI	CCWWGG	4 cut(s)	30, 399, 766, 1087
FaeI	CATG	8 cut(s)	34, 340, 403, 609, 992, 1144, 1372, 1499
FaqI	GGGAC	1 cut(s)	428
FatI	CATG	8 cut(s)	30, 336, 399, 605, 988, 1140, 1368, 1495
FauI	CCCGC	1 cut(s)	141
FblI	GTMKAC	1 cut(s)	1006
Fnu4HI	GCNGC	5 cut(s)	14, 249, 366, 369, 1096
FokI	GGATG	3 cut(s)	13, 1265, 1526
FriOI	GRGCYC	2 cut(s)	233, 766
Fsp4HI	GCNGC	5 cut(s)	14, 249, 366, 369, 1096
FspBI	CTAG	2 cut(s)	63, 767
GlaI	GCGC	6 cut(s)	164, 217, 257, 272, 274, 679
GluI	GCNGC	5 cut(s)	14, 249, 366, 369, 1096
GsaI	CCCAGC	1 cut(s)	1194
GsuI	CTGGAG	2 cut(s)	485, 678
HaeII	RGCGCY	2 cut(s)	166, 259
HaeIII	GGCC	8 cut(s)	182, 251, 531, 764, 807, 968, 1318, 1574
HgaI	GACGC	2 cut(s)	197, 857
HhaI	GCGC	6 cut(s)	165, 218, 258, 273, 275, 680
Hin1I	GRCGYC	1 cut(s)	189
Hin1II	CATG	8 cut(s)	34, 340, 403, 609, 992, 1144, 1372, 1499
Hin6I	GCGC	6 cut(s)	163, 216, 256, 271, 273, 678
HinP1I	GCGC	6 cut(s)	163, 216, 256, 271, 273, 678
HincII	GTYRAC	3 cut(s)	454, 557, 1176
HindII	GTYRAC	3 cut(s)	454, 557, 1176
HindIII	AAGCTT	1 cut(s)	512
HpaI	GTTAAC	1 cut(s)	454
HphI	GGTGA	3 cut(s)	473, 909, 949
Hpy166II	GTNNAC	6 cut(s)	454, 557, 940, 1007, 1176, 1564
Hpy188I	TCNGA	9 cut(s)	127, 187, 198, 974, 1249, 1266, 1447, 1474, 1555
Hpy188III	TCNNGA	8 cut(s)	92, 116, 311, 577, 624, 1123, 1217, 1520
Hpy8I	GTNNAC	6 cut(s)	454, 557, 940, 1007, 1176, 1564
Hpy99I	CGWCG	1 cut(s)	191
HpyAV	CCTTC	7 cut(s)	148, 166, 628, 705, 818, 1229, 1346
HpyCH4III	ACNGT	6 cut(s)	439, 561, 728, 854, 908, 1388
HpyCH4IV	ACGT	3 cut(s)	749, 813, 1038
HpyCH4V	TGCA	6 cut(s)	16, 461, 718, 848, 1140, 1144
HpyF10VI	GCNNNNNNNGC	8 cut(s)	188, 289, 675, 770, 832, 1187, 1339, 1497
HpyF3I	CTNAG	8 cut(s)	650, 707, 971, 1208, 1248, 1338, 1473, 1552
HpySE526I	ACGT	3 cut(s)	749, 813, 1038
Hsp92I	GRCGYC	1 cut(s)	189
Hsp92II	CATG	8 cut(s)	34, 340, 403, 609, 992, 1144, 1372, 1499
HspAI	GCGC	6 cut(s)	163, 216, 256, 271, 273, 678
KspAI	GTTAAC	1 cut(s)	454
Kzo9I	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
LmnI	GCTCC	3 cut(s)	236, 263, 697
Lsp1109I	GCAGC	3 cut(s)	352, 355, 1107
LweI	GCATC	5 cut(s)	1153, 1253, 1259, 1430, 1504
MaeI	CTAG	2 cut(s)	63, 767
MaeII	ACGT	3 cut(s)	749, 813, 1038
MaeIII	GTNAC	6 cut(s)	92, 174, 750, 984, 1358, 1481
MalI	GATC	9 cut(s)	90, 195, 213, 550, 622, 933, 1064, 1072, 1494
MboI	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
MboII	GAAGA	4 cut(s)	296, 695, 876, 1322
MfeI	CAATTG	3 cut(s)	224, 543, 943
MflI	RGATCY	2 cut(s)	548, 620
MhlI	GDGCHC	3 cut(s)	233, 694, 766
MluCI	AATT	7 cut(s)	224, 543, 580, 818, 943, 1028, 1536
MlyI	GAGTC	4 cut(s)	122, 182, 647, 1159
MmeI	TCCRAC	3 cut(s)	150, 210, 621
Mph1103I	ATGCAT	1 cut(s)	1146
MslI	CAYNNNNRTG	1 cut(s)	1500
MspA1I	CMGCKG	1 cut(s)	1181
MspCI	CTTAAG	3 cut(s)	509, 1013, 1279
MspR9I	CCNGG	4 cut(s)	265, 298, 528, 696
MunI	CAATTG	3 cut(s)	224, 543, 943
MvaI	CCWGG	4 cut(s)	265, 298, 528, 696
MvnI	CGCG	3 cut(s)	216, 273, 680
MwoI	GCNNNNNNNGC	8 cut(s)	188, 289, 675, 770, 832, 1187, 1339, 1497
NcoI	CCATGG	2 cut(s)	30, 399
NdeII	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
NlaIII	CATG	8 cut(s)	34, 340, 403, 609, 992, 1144, 1372, 1499
NlaIV	GGNNCC	5 cut(s)	232, 763, 764, 1085, 1374
NmuCI	GTSAC	3 cut(s)	92, 174, 750
NsiI	ATGCAT	1 cut(s)	1146
NspI	RCATGY	1 cut(s)	1144
PaeI	GCATGC	1 cut(s)	1144
PaeR7I	CTCGAG	4 cut(s)	116, 170, 242, 1518
PaqCI	CACCTGC	1 cut(s)	1291
PauI	GCGCGC	1 cut(s)	271
PceI	AGGCCT	1 cut(s)	1318
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PfeI	GAWTC	8 cut(s)	404, 478, 646, 700, 881, 1108, 1126, 1261
PkrI	GCNGC	5 cut(s)	15, 250, 367, 370, 1097
Ple19I	CGATCG	2 cut(s)	91, 214
PleI	GAGTC	4 cut(s)	122, 181, 646, 1159
PpsI	GAGTC	4 cut(s)	122, 181, 646, 1159
PpuMI	RGGWCCY	1 cut(s)	657
PsiI	TTATAA	1 cut(s)	996
Psp5II	RGGWCCY	1 cut(s)	657
Psp6I	CCWGG	4 cut(s)	263, 296, 526, 694
PspFI	CCCAGC	1 cut(s)	1190
PspGI	CCWGG	4 cut(s)	263, 296, 526, 694
PspN4I	GGNNCC	5 cut(s)	232, 763, 764, 1085, 1374
PspOMI	GGGCCC	1 cut(s)	762
PspPI	GGNCC	7 cut(s)	180, 530, 657, 762, 763, 967, 1372
PspPPI	RGGWCCY	1 cut(s)	657
PspXI	VCTCGAGB	2 cut(s)	170, 242
PsuI	RGATCY	2 cut(s)	548, 620
PteI	GCGCGC	1 cut(s)	271
PvuI	CGATCG	2 cut(s)	91, 214
PvuII	CAGCTG	1 cut(s)	1181
RsaI	GTAC	1 cut(s)	1037
RsaNI	GTAC	1 cut(s)	1036
RseI	CAYNNNNRTG	1 cut(s)	1500
SatI	GCNGC	5 cut(s)	14, 249, 366, 369, 1096
Sau3AI	GATC	9 cut(s)	88, 193, 211, 548, 620, 931, 1062, 1070, 1492
Sau96I	GGNCC	7 cut(s)	180, 530, 657, 762, 763, 967, 1372
SchI	GAGTC	4 cut(s)	122, 182, 647, 1159
ScrFI	CCNGG	4 cut(s)	265, 298, 528, 696
SduI	GDGCHC	3 cut(s)	233, 694, 766
SfaNI	GCATC	5 cut(s)	1153, 1253, 1259, 1430, 1504
SfcI	CTRYAG	1 cut(s)	585
Sfr274I	CTCGAG	4 cut(s)	116, 170, 242, 1518
SinI	GGWCC	2 cut(s)	657, 1372
SlaI	CTCGAG	4 cut(s)	116, 170, 242, 1518
SmiMI	CAYNNNNRTG	1 cut(s)	1500
SmlI	CTYRAG	7 cut(s)	116, 170, 242, 509, 1013, 1279, 1518
SmoI	CTYRAG	7 cut(s)	116, 170, 242, 509, 1013, 1279, 1518
SphI	GCATGC	1 cut(s)	1144
Sse9I	AATT	7 cut(s)	224, 543, 580, 818, 943, 1028, 1536
SseBI	AGGCCT	1 cut(s)	1318
SsiI	CCGC	3 cut(s)	134, 248, 261
SspI	AATATT	1 cut(s)	424
SspMI	CTAG	2 cut(s)	63, 767
StuI	AGGCCT	1 cut(s)	1318
StyD4I	CCNGG	4 cut(s)	263, 296, 526, 694
StyI	CCWWGG	4 cut(s)	30, 399, 766, 1087
TaaI	ACNGT	6 cut(s)	439, 561, 728, 854, 908, 1388
TaiI	ACGT	3 cut(s)	752, 816, 1041
TasI	AATT	7 cut(s)	224, 543, 580, 818, 943, 1028, 1536
TauI	GCSGC	1 cut(s)	251
TfiI	GAWTC	8 cut(s)	404, 478, 646, 700, 881, 1108, 1126, 1261
TscAI	CASTG	5 cut(s)	837, 846, 1072, 1393, 1507
TseFI	GTSAC	3 cut(s)	92, 174, 750
TseI	GCWGC	4 cut(s)	13, 365, 368, 1095
Tsp45I	GTSAC	3 cut(s)	92, 174, 750
TspDTI	ATGAA	2 cut(s)	594, 1560
TspGWI	ACGGA	1 cut(s)	223
TspRI	CASTG	5 cut(s)	837, 846, 1072, 1393, 1507
Vha464I	CTTAAG	3 cut(s)	509, 1013, 1279
VpaK11BI	GGWCC	2 cut(s)	657, 1372
XagI	CCTNNNNNAGG	1 cut(s)	242
XapI	RAATTY	1 cut(s)	580
XceI	RCATGY	1 cut(s)	1144
XhoI	CTCGAG	4 cut(s)	116, 170, 242, 1518
XmaJI	CCTAGG	1 cut(s)	766
XmiI	GTMKAC	1 cut(s)	1006
XspI	CTAG	2 cut(s)	63, 767
Zsp2I	ATGCAT	1 cut(s)	1146

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.