f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02733 AT4G02735 AT4G02740 AT4G02740 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G08535 AT4G08535 AT4G08535 |
| fragaria_vesca | FvH4_2g23360 |
| malus_domestica | MD03G1263100.v1.1 MD11G1283900.v1.1 |
| prunus_persica | Prupe.8G239400_v2.0.a1 |
| pyrus_communis | pycom03g21060 pycom11g25130 |
| rosa_chinensis | RchiOBHm_Chr6g0290801 |
| rosa_laevigata | RLG00000012172 |
| rosa_multiflora | Rmu_ssc0000069.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00176720 |
| rosa_rugosa | Rorug06G0214800 |
| rosa_samantha | Rh6AG325500 Rh6BG333100 Rh6CG338700 Rh6DG326200 |
| rosa_wichuraiana | Rw6G028290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1002 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 841 |
| AbsI | CCTCGAGG | 1 cut(s) | 245 |
| Acc36I | ACCTGC | 1 cut(s) | 1300 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 106, 300 |
| AccBSI | CCGCTC | 1 cut(s) | 166 |
| AccI | GTMKAC | 1 cut(s) | 1012 |
| AccII | CGCG | 3 cut(s) | 96, 183, 219 |
| AccIII | TCCGGA | 1 cut(s) | 582 |
| AciI | CCGC | 6 cut(s) | 94, 137, 166, 181, 776, 1163 |
| AclWI | GGATC | 8 cut(s) | 163, 176, 241, 401, 414, 562, 621, 657 |
| AcuI | CTGAAG | 1 cut(s) | 1058 |
| AcyI | GRCGYC | 1 cut(s) | 192 |
| AdeI | CACNNNGTG | 1 cut(s) | 764 |
| AfaI | GTAC | 1 cut(s) | 1539 |
| AfeI | AGCGCT | 1 cut(s) | 260 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 106, 165, 300, 636, 683, 820, 1361 |
| AflII | CTTAAG | 1 cut(s) | 512 |
| AgsI | TTSAA | 7 cut(s) | 384, 740, 887, 919, 1056, 1207, 1458 |
| AjnI | CCWGG | 4 cut(s) | 105, 299, 532, 700 |
| AluBI | AGCT | 9 cut(s) | 208, 374, 500, 517, 940, 1210, 1287, 1485, 1554 |
| AluI | AGCT | 9 cut(s) | 208, 374, 500, 517, 940, 1210, 1287, 1485, 1554 |
| Alw21I | GWGCWC | 3 cut(s) | 243, 700, 1439 |
| Alw26I | GTCTC | 4 cut(s) | 104, 262, 513, 1562 |
| AlwI | GGATC | 8 cut(s) | 163, 176, 241, 401, 414, 562, 621, 657 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 666 |
| Ama87I | CYCGRG | 1 cut(s) | 245 |
| Aor13HI | TCCGGA | 1 cut(s) | 582 |
| Aor51HI | AGCGCT | 1 cut(s) | 260 |
| AoxI | GGCC | 7 cut(s) | 65, 249, 303, 535, 777, 811, 1325 |
| ApaI | GGGCCC | 1 cut(s) | 307 |
| ApeKI | GCWGC | 2 cut(s) | 368, 371 |
| AspA2I | CCTAGG | 1 cut(s) | 62 |
| AspLEI | GCGC | 3 cut(s) | 221, 261, 854 |
| AspS9I | GGNCC | 4 cut(s) | 66, 303, 304, 536 |
| AsuC2I | CCSGG | 1 cut(s) | 488 |
| AsuHPI | GGTGA | 4 cut(s) | 313, 476, 915, 1271 |
| AvaI | CYCGRG | 1 cut(s) | 245 |
| AvrII | CCTAGG | 1 cut(s) | 62 |
| BaeGI | GKGCMC | 1 cut(s) | 307 |
| BamHI | GGATCC | 2 cut(s) | 168, 406 |
| BanII | GRGCYC | 3 cut(s) | 307, 677, 709 |
| Bbv12I | GWGCWC | 3 cut(s) | 243, 700, 1439 |
| BbvI | GCAGC | 2 cut(s) | 355, 383 |
| BccI | CCATC | 7 cut(s) | 155, 302, 332, 793, 1363, 1432, 1445 |
| BceAI | ACGGC | 1 cut(s) | 287 |
| BciT130I | CCWGG | 4 cut(s) | 107, 301, 534, 702 |
| BclI | TGATCA | 2 cut(s) | 1381, 1495 |
| BcnI | CCSGG | 1 cut(s) | 488 |
| BcoDI | GTCTC | 4 cut(s) | 104, 262, 513, 1562 |
| BfaI | CTAG | 4 cut(s) | 63, 680, 1343, 1530 |
| BfmI | CTRYAG | 3 cut(s) | 369, 591, 1282 |
| BfoI | RGCGCY | 1 cut(s) | 262 |
| BfrI | CTTAAG | 1 cut(s) | 512 |
| BfuAI | ACCTGC | 1 cut(s) | 1300 |
| BisI | GCNGC | 3 cut(s) | 369, 372, 777 |
| BlnI | CCTAGG | 1 cut(s) | 62 |
| BlsI | GCNGC | 3 cut(s) | 370, 373, 778 |
| Bme1390I | CCNGG | 5 cut(s) | 107, 301, 488, 534, 702 |
| BmeT110I | CYCGRG | 1 cut(s) | 245 |
| BmgT120I | GGNCC | 4 cut(s) | 66, 303, 304, 536 |
| BmiI | GGNNCC | 5 cut(s) | 68, 170, 305, 408, 1091 |
| BmrFI | CCNGG | 5 cut(s) | 107, 301, 488, 534, 702 |
| BmrI | ACTGGG | 1 cut(s) | 1083 |
| BmsI | GCATC | 6 cut(s) | 764, 1159, 1259, 1268, 1507, 1516 |
| BmuI | ACTGGG | 1 cut(s) | 1083 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1538, 1570 |
| BpmI | CTGGAG | 4 cut(s) | 128, 209, 488, 684 |
| BpuEI | CTTGAG | 1 cut(s) | 1309 |
| BpuMI | CCSGG | 1 cut(s) | 488 |
| Bsa29I | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BsaHI | GRCGYC | 1 cut(s) | 192 |
| BsaI | GGTCTC | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 6 cut(s) | 30, 62, 300, 402, 701, 1093 |
| BsaWI | WCCGGW | 1 cut(s) | 582 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 106, 165, 300, 636, 683, 820, 1361 |
| Bse118I | RCCGGY | 1 cut(s) | 251 |
| Bse1I | ACTGG | 4 cut(s) | 226, 505, 1078, 1268 |
| BseAI | TCCGGA | 1 cut(s) | 582 |
| BseBI | CCWGG | 4 cut(s) | 107, 301, 534, 702 |
| BseCI | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BseDI | CCNNGG | 6 cut(s) | 30, 62, 300, 402, 701, 1093 |
| BseGI | GGATG | 4 cut(s) | 26, 1355, 1522, 1531 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 106, 165, 300, 636, 683, 820, 1361 |
| BseMII | CTCAG | 6 cut(s) | 818, 991, 1076, 1245, 1467, 1569 |
| BseNI | ACTGG | 4 cut(s) | 226, 505, 1078, 1268 |
| BseRI | GAGGAG | 2 cut(s) | 5, 233 |
| BseSI | GKGCMC | 1 cut(s) | 307 |
| BseXI | GCAGC | 2 cut(s) | 355, 383 |
| Bsh1236I | CGCG | 3 cut(s) | 96, 183, 219 |
| Bsh1285I | CGRYCG | 1 cut(s) | 217 |
| BshFI | GGCC | 7 cut(s) | 67, 251, 305, 537, 779, 813, 1327 |
| BshVI | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BsiEI | CGRYCG | 1 cut(s) | 217 |
| BsiHKAI | GWGCWC | 3 cut(s) | 243, 700, 1439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 245 |
| BsiSI | CCGG | 3 cut(s) | 252, 487, 583 |
| BslFI | GGGAC | 1 cut(s) | 701 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 106, 165, 300, 636, 683, 820, 1361 |
| BsmAI | GTCTC | 4 cut(s) | 104, 262, 513, 1562 |
| BsmBI | CGTCTC | 1 cut(s) | 262 |
| BsmFI | GGGAC | 1 cut(s) | 701 |
| BsmI | GAATGC | 1 cut(s) | 1189 |
| BsnI | GGCC | 7 cut(s) | 67, 251, 305, 537, 779, 813, 1327 |
| Bso31I | GGTCTC | 1 cut(s) | 104 |
| BsoBI | CYCGRG | 1 cut(s) | 245 |
| Bsp120I | GGGCCC | 1 cut(s) | 303 |
| Bsp1286I | GDGCHC | 6 cut(s) | 243, 307, 677, 700, 709, 1439 |
| Bsp13I | TCCGGA | 1 cut(s) | 582 |
| Bsp19I | CCATGG | 2 cut(s) | 30, 402 |
| BspACI | CCGC | 6 cut(s) | 94, 137, 166, 181, 776, 1163 |
| BspANI | GGCC | 7 cut(s) | 67, 251, 305, 537, 779, 813, 1327 |
| BspCNI | CTCAG | 6 cut(s) | 819, 990, 1077, 1246, 1468, 1568 |
| BspDI | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BspEI | TCCGGA | 1 cut(s) | 582 |
| BspFNI | CGCG | 3 cut(s) | 96, 183, 219 |
| BspLI | GGNNCC | 5 cut(s) | 68, 170, 305, 408, 1091 |
| BspMAI | CTGCAG | 1 cut(s) | 373 |
| BspMI | ACCTGC | 1 cut(s) | 1300 |
| BspPI | GGATC | 8 cut(s) | 163, 176, 241, 401, 414, 562, 621, 657 |
| BspTI | CTTAAG | 1 cut(s) | 512 |
| BspTNI | GGTCTC | 1 cut(s) | 104 |
| BsrBI | CCGCTC | 1 cut(s) | 166 |
| BsrFI | RCCGGY | 1 cut(s) | 251 |
| BsrI | ACTGG | 4 cut(s) | 226, 505, 1078, 1268 |
| BssAI | RCCGGY | 1 cut(s) | 251 |
| BssECI | CCNNGG | 6 cut(s) | 30, 62, 300, 402, 701, 1093 |
| BssNAI | GTATAC | 1 cut(s) | 1013 |
| BssNI | GRCGYC | 1 cut(s) | 192 |
| BssT1I | CCWWGG | 4 cut(s) | 30, 62, 402, 1093 |
| Bst1107I | GTATAC | 1 cut(s) | 1013 |
| Bst2UI | CCWGG | 4 cut(s) | 107, 301, 534, 702 |
| Bst4CI | ACNGT | 6 cut(s) | 442, 692, 860, 914, 1379, 1397 |
| BstACI | GRCGYC | 1 cut(s) | 192 |
| BstAFI | CTTAAG | 1 cut(s) | 512 |
| BstC8I | GCNNGC | 3 cut(s) | 276, 931, 1148 |
| BstDEI | CTNAG | 8 cut(s) | 568, 827, 977, 1085, 1214, 1254, 1476, 1555 |
| BstDSI | CCRYGG | 2 cut(s) | 30, 402 |
| BstF5I | GGATG | 4 cut(s) | 26, 1355, 1522, 1531 |
| BstFNI | CGCG | 3 cut(s) | 96, 183, 219 |
| BstH2I | RGCGCY | 1 cut(s) | 262 |
| BstHHI | GCGC | 3 cut(s) | 221, 261, 854 |
| BstMAI | GTCTC | 4 cut(s) | 104, 262, 513, 1562 |
| BstMCI | CGRYCG | 1 cut(s) | 217 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 497, 704, 776, 1526 |
| BstNI | CCWGG | 4 cut(s) | 107, 301, 534, 702 |
| BstNSI | RCATGY | 1 cut(s) | 1150 |
| BstSCI | CCNGG | 5 cut(s) | 105, 299, 486, 532, 700 |
| BstSFI | CTRYAG | 3 cut(s) | 369, 591, 1282 |
| BstSLI | GKGCMC | 1 cut(s) | 307 |
| BstUI | CGCG | 3 cut(s) | 96, 183, 219 |
| BstV1I | GCAGC | 2 cut(s) | 355, 383 |
| BstX2I | RGATCY | 5 cut(s) | 168, 406, 554, 626, 662 |
| BstYI | RGATCY | 5 cut(s) | 168, 406, 554, 626, 662 |
| BstZ17I | GTATAC | 1 cut(s) | 1013 |
| Bsu15I | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BsuRI | GGCC | 7 cut(s) | 67, 251, 305, 537, 779, 813, 1327 |
| BsuTUI | ATCGAT | 3 cut(s) | 150, 213, 650 |
| BtgI | CCRYGG | 2 cut(s) | 30, 402 |
| BtgZI | GCGATG | 1 cut(s) | 280 |
| BtsCI | GGATG | 4 cut(s) | 26, 1355, 1522, 1531 |
| BtsIMutI | CAGTG | 5 cut(s) | 697, 852, 1071, 1384, 1402 |
| BveI | ACCTGC | 1 cut(s) | 1300 |
| Cac8I | GCNNGC | 3 cut(s) | 276, 931, 1148 |
| CaiI | CAGNNNCTG | 1 cut(s) | 666 |
| CfoI | GCGC | 3 cut(s) | 221, 261, 854 |
| Cfr10I | RCCGGY | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 4 cut(s) | 66, 303, 304, 536 |
| ClaI | ATCGAT | 3 cut(s) | 150, 213, 650 |
| CseI | GACGC | 1 cut(s) | 200 |
| Csp6I | GTAC | 1 cut(s) | 1538 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1090, 1125 |
| CviAII | CATG | 8 cut(s) | 31, 403, 612, 818, 959, 995, 1147, 1499 |
| CviQI | GTAC | 1 cut(s) | 1538 |
| DdeI | CTNAG | 8 cut(s) | 568, 827, 977, 1085, 1214, 1254, 1476, 1555 |
| DraI | TTTAAA | 1 cut(s) | 988 |
| DraIII | CACNNNGTG | 1 cut(s) | 764 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 841 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 841 |
| EciI | GGCGGA | 1 cut(s) | 1178 |
| Eco130I | CCWWGG | 4 cut(s) | 30, 62, 402, 1093 |
| Eco147I | AGGCCT | 1 cut(s) | 1327 |
| Eco24I | GRGCYC | 3 cut(s) | 307, 677, 709 |
| Eco31I | GGTCTC | 1 cut(s) | 104 |
| Eco32I | GATATC | 1 cut(s) | 1414 |
| Eco47III | AGCGCT | 1 cut(s) | 260 |
| Eco57I | CTGAAG | 1 cut(s) | 1058 |
| Eco88I | CYCGRG | 1 cut(s) | 245 |
| EcoO109I | RGGNCCY | 2 cut(s) | 66, 304 |
| EcoRII | CCWGG | 4 cut(s) | 105, 299, 532, 700 |
| EcoRV | GATATC | 1 cut(s) | 1414 |
| EcoT14I | CCWWGG | 4 cut(s) | 30, 62, 402, 1093 |
| EcoT22I | ATGCAT | 2 cut(s) | 757, 1152 |
| EcoT38I | GRGCYC | 3 cut(s) | 307, 677, 709 |
| ErhI | CCWWGG | 4 cut(s) | 30, 62, 402, 1093 |
| Esp3I | CGTCTC | 1 cut(s) | 262 |
| FaeI | CATG | 8 cut(s) | 34, 406, 615, 821, 962, 998, 1150, 1502 |
| FaqI | GGGAC | 1 cut(s) | 701 |
| FatI | CATG | 8 cut(s) | 30, 402, 611, 817, 958, 994, 1146, 1498 |
| FauI | CCCGC | 2 cut(s) | 144, 188 |
| FbaI | TGATCA | 2 cut(s) | 1381, 1495 |
| FblI | GTMKAC | 1 cut(s) | 1012 |
| Fnu4HI | GCNGC | 3 cut(s) | 369, 372, 777 |
| FokI | GGATG | 4 cut(s) | 13, 1342, 1529, 1538 |
| FriOI | GRGCYC | 3 cut(s) | 307, 677, 709 |
| Fsp4HI | GCNGC | 3 cut(s) | 369, 372, 777 |
| FspBI | CTAG | 4 cut(s) | 63, 680, 1343, 1530 |
| GlaI | GCGC | 3 cut(s) | 220, 260, 853 |
| GluI | GCNGC | 3 cut(s) | 369, 372, 777 |
| GsuI | CTGGAG | 4 cut(s) | 128, 209, 488, 684 |
| HaeII | RGCGCY | 1 cut(s) | 262 |
| HaeIII | GGCC | 7 cut(s) | 67, 251, 305, 537, 779, 813, 1327 |
| HapII | CCGG | 3 cut(s) | 252, 487, 583 |
| HgaI | GACGC | 1 cut(s) | 200 |
| HhaI | GCGC | 3 cut(s) | 221, 261, 854 |
| Hin1I | GRCGYC | 1 cut(s) | 192 |
| Hin1II | CATG | 8 cut(s) | 34, 406, 615, 821, 962, 998, 1150, 1502 |
| Hin6I | GCGC | 3 cut(s) | 219, 259, 852 |
| HinP1I | GCGC | 3 cut(s) | 219, 259, 852 |
| HincII | GTYRAC | 2 cut(s) | 457, 1048 |
| HindII | GTYRAC | 2 cut(s) | 457, 1048 |
| HindIII | AAGCTT | 1 cut(s) | 515 |
| HinfI | GANTC | 7 cut(s) | 131, 176, 185, 481, 644, 652, 887 |
| HpaI | GTTAAC | 1 cut(s) | 457 |
| HpaII | CCGG | 3 cut(s) | 252, 487, 583 |
| HphI | GGTGA | 4 cut(s) | 313, 476, 915, 1271 |
| Hpy166II | GTNNAC | 3 cut(s) | 457, 1013, 1048 |
| Hpy188III | TCNNGA | 7 cut(s) | 314, 583, 630, 660, 800, 1223, 1523 |
| Hpy8I | GTNNAC | 3 cut(s) | 457, 1013, 1048 |
| Hpy99I | CGWCG | 1 cut(s) | 194 |
| HpyAV | CCTTC | 8 cut(s) | 124, 151, 169, 420, 634, 824, 1235, 1355 |
| HpyCH4III | ACNGT | 6 cut(s) | 442, 692, 860, 914, 1379, 1397 |
| HpyCH4IV | ACGT | 2 cut(s) | 545, 1445 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 497, 704, 776, 1526 |
| HpyF3I | CTNAG | 8 cut(s) | 568, 827, 977, 1085, 1214, 1254, 1476, 1555 |
| HpySE526I | ACGT | 2 cut(s) | 545, 1445 |
| Hsp92I | GRCGYC | 1 cut(s) | 192 |
| Hsp92II | CATG | 8 cut(s) | 34, 406, 615, 821, 962, 998, 1150, 1502 |
| HspAI | GCGC | 3 cut(s) | 219, 259, 852 |
| Kpn2I | TCCGGA | 1 cut(s) | 582 |
| Ksp22I | TGATCA | 2 cut(s) | 1381, 1495 |
| KspAI | GTTAAC | 1 cut(s) | 457 |
| LmnI | GCTCC | 3 cut(s) | 246, 703, 1215 |
| Lsp1109I | GCAGC | 2 cut(s) | 355, 383 |
| LweI | GCATC | 6 cut(s) | 764, 1159, 1259, 1268, 1507, 1516 |
| MaeI | CTAG | 4 cut(s) | 63, 680, 1343, 1530 |
| MaeII | ACGT | 2 cut(s) | 545, 1445 |
| MaeIII | GTNAC | 4 cut(s) | 546, 860, 961, 1259 |
| MbiI | CCGCTC | 1 cut(s) | 166 |
| MflI | RGATCY | 5 cut(s) | 168, 406, 554, 626, 662 |
| MhlI | GDGCHC | 6 cut(s) | 243, 307, 677, 700, 709, 1439 |
| MluCI | AATT | 4 cut(s) | 719, 804, 867, 949 |
| MlyI | GAGTC | 4 cut(s) | 125, 170, 179, 653 |
| MmeI | TCCRAC | 3 cut(s) | 153, 213, 1101 |
| Mph1103I | ATGCAT | 2 cut(s) | 757, 1152 |
| MroI | TCCGGA | 1 cut(s) | 582 |
| MseI | TTAA | 7 cut(s) | 390, 456, 513, 866, 987, 1020, 1304 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1503 |
| MspCI | CTTAAG | 1 cut(s) | 512 |
| MspI | CCGG | 3 cut(s) | 252, 487, 583 |
| MspR9I | CCNGG | 5 cut(s) | 107, 301, 488, 534, 702 |
| Mva1269I | GAATGC | 1 cut(s) | 1189 |
| MvaI | CCWGG | 4 cut(s) | 107, 301, 534, 702 |
| MvnI | CGCG | 3 cut(s) | 96, 183, 219 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 497, 704, 776, 1526 |
| NciI | CCSGG | 1 cut(s) | 488 |
| NcoI | CCATGG | 2 cut(s) | 30, 402 |
| NlaIII | CATG | 8 cut(s) | 34, 406, 615, 821, 962, 998, 1150, 1502 |
| NlaIV | GGNNCC | 5 cut(s) | 68, 170, 305, 408, 1091 |
| NmeAIII | GCCGAG | 2 cut(s) | 242, 1372 |
| NmuCI | GTSAC | 3 cut(s) | 546, 860, 1259 |
| NsiI | ATGCAT | 2 cut(s) | 757, 1152 |
| NspI | RCATGY | 1 cut(s) | 1150 |
| PaeI | GCATGC | 1 cut(s) | 1150 |
| PaeR7I | CTCGAG | 1 cut(s) | 245 |
| PceI | AGGCCT | 1 cut(s) | 1327 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 126, 180 |
| PctI | GAATGC | 1 cut(s) | 1189 |
| PfeI | GAWTC | 3 cut(s) | 481, 652, 887 |
| PflFI | GACNNNGTC | 1 cut(s) | 544 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 106, 300 |
| PfoI | TCCNGGA | 1 cut(s) | 105 |
| PkrI | GCNGC | 3 cut(s) | 370, 373, 778 |
| Ple19I | CGATCG | 1 cut(s) | 217 |
| PleI | GAGTC | 4 cut(s) | 125, 170, 179, 652 |
| PpsI | GAGTC | 4 cut(s) | 125, 170, 179, 652 |
| PsiI | TTATAA | 1 cut(s) | 1002 |
| Psp6I | CCWGG | 4 cut(s) | 105, 299, 532, 700 |
| PspGI | CCWGG | 4 cut(s) | 105, 299, 532, 700 |
| PspN4I | GGNNCC | 5 cut(s) | 68, 170, 305, 408, 1091 |
| PspOMI | GGGCCC | 1 cut(s) | 303 |
| PspPI | GGNCC | 4 cut(s) | 66, 303, 304, 536 |
| PspXI | VCTCGAGB | 1 cut(s) | 245 |
| PstI | CTGCAG | 1 cut(s) | 373 |
| PstNI | CAGNNNCTG | 1 cut(s) | 666 |
| PsuI | RGATCY | 5 cut(s) | 168, 406, 554, 626, 662 |
| PsyI | GACNNNGTC | 1 cut(s) | 544 |
| PvuI | CGATCG | 1 cut(s) | 217 |
| RsaI | GTAC | 1 cut(s) | 1539 |
| RsaNI | GTAC | 1 cut(s) | 1538 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1503 |
| SaqAI | TTAA | 7 cut(s) | 390, 456, 513, 866, 987, 1020, 1304 |
| SatI | GCNGC | 3 cut(s) | 369, 372, 777 |
| Sau96I | GGNCC | 4 cut(s) | 66, 303, 304, 536 |
| SchI | GAGTC | 4 cut(s) | 125, 170, 179, 653 |
| ScrFI | CCNGG | 5 cut(s) | 107, 301, 488, 534, 702 |
| SduI | GDGCHC | 6 cut(s) | 243, 307, 677, 700, 709, 1439 |
| SfaNI | GCATC | 6 cut(s) | 764, 1159, 1259, 1268, 1507, 1516 |
| SfcI | CTRYAG | 3 cut(s) | 369, 591, 1282 |
| Sfr274I | CTCGAG | 1 cut(s) | 245 |
| SlaI | CTCGAG | 1 cut(s) | 245 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1503 |
| SmlI | CTYRAG | 3 cut(s) | 245, 512, 1288 |
| SmoI | CTYRAG | 3 cut(s) | 245, 512, 1288 |
| SphI | GCATGC | 1 cut(s) | 1150 |
| Sse9I | AATT | 4 cut(s) | 719, 804, 867, 949 |
| SseBI | AGGCCT | 1 cut(s) | 1327 |
| SsiI | CCGC | 6 cut(s) | 94, 137, 166, 181, 776, 1163 |
| SspI | AATATT | 2 cut(s) | 427, 736 |
| SspMI | CTAG | 4 cut(s) | 63, 680, 1343, 1530 |
| StuI | AGGCCT | 1 cut(s) | 1327 |
| StyD4I | CCNGG | 5 cut(s) | 105, 299, 486, 532, 700 |
| StyI | CCWWGG | 4 cut(s) | 30, 62, 402, 1093 |
| TaaI | ACNGT | 6 cut(s) | 442, 692, 860, 914, 1379, 1397 |
| TaiI | ACGT | 2 cut(s) | 548, 1448 |
| TaqI | TCGA | 9 cut(s) | 120, 150, 162, 174, 213, 246, 345, 650, 1392 |
| TasI | AATT | 4 cut(s) | 719, 804, 867, 949 |
| TatI | WGTACW | 1 cut(s) | 1537 |
| TauI | GCSGC | 1 cut(s) | 779 |
| TfiI | GAWTC | 3 cut(s) | 481, 652, 887 |
| Tru1I | TTAA | 7 cut(s) | 390, 456, 513, 866, 987, 1020, 1304 |
| Tru9I | TTAA | 7 cut(s) | 390, 456, 513, 866, 987, 1020, 1304 |
| TscAI | CASTG | 5 cut(s) | 697, 852, 1078, 1384, 1402 |
| TseFI | GTSAC | 3 cut(s) | 546, 860, 1259 |
| TseI | GCWGC | 2 cut(s) | 368, 371 |
| Tsp45I | GTSAC | 3 cut(s) | 546, 860, 1259 |
| TspDTI | ATGAA | 4 cut(s) | 600, 806, 957, 1287 |
| TspGWI | ACGGA | 1 cut(s) | 12 |
| TspRI | CASTG | 5 cut(s) | 697, 852, 1078, 1384, 1402 |
| Tth111I | GACNNNGTC | 1 cut(s) | 544 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 106, 300 |
| Vha464I | CTTAAG | 1 cut(s) | 512 |
| XceI | RCATGY | 1 cut(s) | 1150 |
| XhoI | CTCGAG | 1 cut(s) | 245 |
| XmaJI | CCTAGG | 1 cut(s) | 62 |
| XmiI | GTMKAC | 1 cut(s) | 1012 |
| XspI | CTAG | 4 cut(s) | 63, 680, 1343, 1530 |
| Zsp2I | ATGCAT | 2 cut(s) | 757, 1152 |