f-box protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02733 AT4G02735 AT4G02740 AT4G02740 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G02760 AT4G08535 AT4G08535 AT4G08535 |
| fragaria_vesca | FvH4_2g23360 |
| malus_domestica | MD03G1263100.v1.1 MD11G1283900.v1.1 |
| prunus_persica | Prupe.8G239400_v2.0.a1 |
| pyrus_communis | pycom03g21060 pycom11g25130 |
| rosa_chinensis | RchiOBHm_Chr6g0290801 |
| rosa_laevigata | RLG00000012172 |
| rosa_multiflora | Rmu_ssc0000069.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00176720 |
| rosa_rugosa | Rorug06G0214800 |
| rosa_samantha | Rh6AG325500 Rh6BG333100 Rh6CG338700 Rh6DG326200 |
| rosa_wichuraiana | Rw6G028290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 360, 966 |
| AbsI | CCTCGAGG | 1 cut(s) | 212 |
| AccI | GTMKAC | 3 cut(s) | 558, 976, 1524 |
| AccII | CGCG | 2 cut(s) | 63, 186 |
| AciI | CCGC | 7 cut(s) | 61, 104, 219, 231, 241, 431, 1270 |
| AclWI | GGATC | 5 cut(s) | 368, 381, 442, 526, 621 |
| AcoI | YGGCCR | 1 cut(s) | 1533 |
| AcsI | RAATTY | 1 cut(s) | 550 |
| AcuI | CTGAAG | 1 cut(s) | 925 |
| AcyI | GRCGYC | 2 cut(s) | 159, 1214 |
| AdeI | CACNNNGTG | 1 cut(s) | 728 |
| AfaI | GTAC | 1 cut(s) | 1007 |
| AfeI | AGCGCT | 1 cut(s) | 227 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 196, 214, 240, 647, 945, 1269, 1322, 1339 |
| AflII | CTTAAG | 3 cut(s) | 479, 983, 992 |
| AgsI | TTSAA | 9 cut(s) | 351, 704, 788, 851, 858, 883, 1020, 1171, 1425 |
| AjnI | CCWGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1157, 1189 |
| AluBI | AGCT | 7 cut(s) | 55, 175, 341, 458, 484, 1151, 1512 |
| AluI | AGCT | 7 cut(s) | 55, 175, 341, 458, 484, 1151, 1512 |
| Alw21I | GWGCWC | 1 cut(s) | 736 |
| Alw26I | GTCTC | 1 cut(s) | 480 |
| AlwI | GGATC | 5 cut(s) | 368, 381, 442, 526, 621 |
| Ama87I | CYCGRG | 3 cut(s) | 86, 140, 212 |
| Aor51HI | AGCGCT | 1 cut(s) | 227 |
| AoxI | GGCC | 7 cut(s) | 150, 216, 499, 775, 936, 1286, 1533 |
| ApeKI | GCWGC | 3 cut(s) | 335, 338, 1065 |
| ApoI | RAATTY | 1 cut(s) | 550 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 110, 142, 1334, 1366 |
| AspLEI | GCGC | 3 cut(s) | 135, 188, 228 |
| AspS9I | GGNCC | 3 cut(s) | 500, 1287, 1342 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 879, 919 |
| AvaI | CYCGRG | 3 cut(s) | 86, 140, 212 |
| AvaII | GGWCC | 1 cut(s) | 1342 |
| BamHI | GGATCC | 1 cut(s) | 373 |
| BanII | GRGCYC | 2 cut(s) | 40, 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 736 |
| BbvI | GCAGC | 3 cut(s) | 322, 350, 1077 |
| BccI | CCATC | 3 cut(s) | 122, 551, 1412 |
| BceAI | ACGGC | 1 cut(s) | 1520 |
| BciT130I | CCWGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| BciVI | GTATCC | 2 cut(s) | 706, 1477 |
| BclI | TGATCA | 1 cut(s) | 1462 |
| BcoDI | GTCTC | 1 cut(s) | 480 |
| BfaI | CTAG | 3 cut(s) | 33, 624, 1038 |
| BfmI | CTRYAG | 2 cut(s) | 336, 555 |
| BfoI | RGCGCY | 2 cut(s) | 136, 229 |
| BfrI | CTTAAG | 3 cut(s) | 479, 983, 992 |
| BfuI | GTATCC | 2 cut(s) | 706, 1477 |
| BglII | AGATCT | 1 cut(s) | 590 |
| BisI | GCNGC | 5 cut(s) | 104, 219, 336, 339, 1066 |
| BlsI | GCNGC | 5 cut(s) | 105, 220, 337, 340, 1067 |
| Bme1390I | CCNGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| Bme18I | GGWCC | 1 cut(s) | 1342 |
| BmeT110I | CYCGRG | 3 cut(s) | 86, 140, 212 |
| BmgT120I | GGNCC | 3 cut(s) | 500, 1287, 1342 |
| BmiI | GGNNCC | 4 cut(s) | 202, 375, 1055, 1344 |
| BmrFI | CCNGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| BmsI | GCATC | 3 cut(s) | 1123, 1229, 1400 |
| BpmI | CTGGAG | 3 cut(s) | 176, 455, 648 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1250 |
| Bsa29I | ATCGAT | 1 cut(s) | 180 |
| BsaHI | GRCGYC | 2 cut(s) | 159, 1214 |
| BsaJI | CCNNGG | 5 cut(s) | 147, 267, 369, 665, 1057 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 196, 214, 240, 647, 945, 1269, 1322, 1339 |
| Bse1I | ACTGG | 3 cut(s) | 193, 472, 1232 |
| Bse3DI | GCAATG | 2 cut(s) | 800, 1483 |
| BseBI | CCWGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| BseCI | ATCGAT | 1 cut(s) | 180 |
| BseDI | CCNNGG | 5 cut(s) | 147, 267, 369, 665, 1057 |
| BseGI | GGATG | 2 cut(s) | 611, 1228 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 196, 214, 240, 647, 945, 1269, 1322, 1339 |
| BseMI | GCAATG | 2 cut(s) | 800, 1483 |
| BseMII | CTCAG | 5 cut(s) | 668, 1299, 1390, 1434, 1527 |
| BseNI | ACTGG | 3 cut(s) | 193, 472, 1232 |
| BseRI | GAGGAG | 4 cut(s) | 62, 128, 200, 694 |
| BseXI | GCAGC | 3 cut(s) | 322, 350, 1077 |
| BseYI | CCCAGC | 2 cut(s) | 458, 1160 |
| Bsh1236I | CGCG | 2 cut(s) | 63, 186 |
| Bsh1285I | CGRYCG | 3 cut(s) | 61, 184, 1035 |
| BshFI | GGCC | 7 cut(s) | 152, 218, 501, 777, 938, 1288, 1535 |
| BshVI | ATCGAT | 1 cut(s) | 180 |
| BsiEI | CGRYCG | 3 cut(s) | 61, 184, 1035 |
| BsiHKAI | GWGCWC | 1 cut(s) | 736 |
| BsiHKCI | CYCGRG | 3 cut(s) | 86, 140, 212 |
| BslFI | GGGAC | 5 cut(s) | 130, 257, 398, 682, 1002 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 196, 214, 240, 647, 945, 1269, 1322, 1339 |
| BsmAI | GTCTC | 1 cut(s) | 480 |
| BsmFI | GGGAC | 5 cut(s) | 130, 257, 398, 682, 1002 |
| BsnI | GGCC | 7 cut(s) | 152, 218, 501, 777, 938, 1288, 1535 |
| BsoBI | CYCGRG | 3 cut(s) | 86, 140, 212 |
| Bsp1286I | GDGCHC | 3 cut(s) | 40, 203, 736 |
| Bsp19I | CCATGG | 1 cut(s) | 369 |
| BspACI | CCGC | 7 cut(s) | 61, 104, 219, 231, 241, 431, 1270 |
| BspANI | GGCC | 7 cut(s) | 152, 218, 501, 777, 938, 1288, 1535 |
| BspCNI | CTCAG | 5 cut(s) | 669, 1300, 1389, 1435, 1526 |
| BspDI | ATCGAT | 1 cut(s) | 180 |
| BspFNI | CGCG | 2 cut(s) | 63, 186 |
| BspLI | GGNNCC | 4 cut(s) | 202, 375, 1055, 1344 |
| BspMAI | CTGCAG | 1 cut(s) | 340 |
| BspPI | GGATC | 5 cut(s) | 368, 381, 442, 526, 621 |
| BspTI | CTTAAG | 3 cut(s) | 479, 983, 992 |
| BsrDI | GCAATG | 2 cut(s) | 800, 1483 |
| BsrI | ACTGG | 3 cut(s) | 193, 472, 1232 |
| BssECI | CCNNGG | 5 cut(s) | 147, 267, 369, 665, 1057 |
| BssNAI | GTATAC | 1 cut(s) | 977 |
| BssNI | GRCGYC | 2 cut(s) | 159, 1214 |
| BssT1I | CCWWGG | 2 cut(s) | 369, 1057 |
| Bst1107I | GTATAC | 1 cut(s) | 977 |
| Bst2UI | CCWGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| Bst4CI | ACNGT | 5 cut(s) | 409, 531, 824, 878, 1358 |
| Bst6I | CTCTTC | 1 cut(s) | 678 |
| BstACI | GRCGYC | 2 cut(s) | 159, 1214 |
| BstAFI | CTTAAG | 3 cut(s) | 479, 983, 992 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 802 |
| BstC8I | GCNNGC | 3 cut(s) | 745, 1112, 1305 |
| BstDEI | CTNAG | 7 cut(s) | 677, 1178, 1250, 1308, 1376, 1443, 1513 |
| BstDSI | CCRYGG | 1 cut(s) | 369 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 212 |
| BstF5I | GGATG | 2 cut(s) | 611, 1228 |
| BstFNI | CGCG | 2 cut(s) | 63, 186 |
| BstH2I | RGCGCY | 2 cut(s) | 136, 229 |
| BstHHI | GCGC | 3 cut(s) | 135, 188, 228 |
| BstMAI | GTCTC | 1 cut(s) | 480 |
| BstMCI | CGRYCG | 3 cut(s) | 61, 184, 1035 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 158, 740, 802, 1157 |
| BstNI | CCWGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| BstNSI | RCATGY | 1 cut(s) | 1114 |
| BstSCI | CCNGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| BstSFI | CTRYAG | 2 cut(s) | 336, 555 |
| BstUI | CGCG | 2 cut(s) | 63, 186 |
| BstV1I | GCAGC | 3 cut(s) | 322, 350, 1077 |
| BstX2I | RGATCY | 4 cut(s) | 373, 518, 590, 626 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 458 |
| BstYI | RGATCY | 4 cut(s) | 373, 518, 590, 626 |
| BstZ17I | GTATAC | 1 cut(s) | 977 |
| Bsu15I | ATCGAT | 1 cut(s) | 180 |
| BsuI | GTATCC | 2 cut(s) | 706, 1477 |
| BsuRI | GGCC | 7 cut(s) | 152, 218, 501, 777, 938, 1288, 1535 |
| BsuTUI | ATCGAT | 1 cut(s) | 180 |
| BtgI | CCRYGG | 1 cut(s) | 369 |
| BtsCI | GGATG | 2 cut(s) | 611, 1228 |
| BtsIMutI | CAGTG | 2 cut(s) | 816, 1363 |
| Cac8I | GCNNGC | 3 cut(s) | 745, 1112, 1305 |
| CfoI | GCGC | 3 cut(s) | 135, 188, 228 |
| Cfr13I | GGNCC | 3 cut(s) | 500, 1287, 1342 |
| ClaI | ATCGAT | 1 cut(s) | 180 |
| CseI | GACGC | 3 cut(s) | 167, 827, 1203 |
| Csp6I | GTAC | 1 cut(s) | 1006 |
| CviAII | CATG | 8 cut(s) | 307, 370, 576, 782, 959, 1111, 1339, 1466 |
| CviQI | GTAC | 1 cut(s) | 1006 |
| DdeI | CTNAG | 7 cut(s) | 677, 1178, 1250, 1308, 1376, 1443, 1513 |
| DraIII | CACNNNGTG | 1 cut(s) | 728 |
| EaeI | YGGCCR | 1 cut(s) | 1533 |
| Eam1104I | CTCTTC | 1 cut(s) | 678 |
| EarI | CTCTTC | 1 cut(s) | 678 |
| EciI | GGCGGA | 1 cut(s) | 220 |
| Eco130I | CCWWGG | 2 cut(s) | 369, 1057 |
| Eco147I | AGGCCT | 1 cut(s) | 152 |
| Eco24I | GRGCYC | 2 cut(s) | 40, 203 |
| Eco47I | GGWCC | 1 cut(s) | 1342 |
| Eco47III | AGCGCT | 1 cut(s) | 227 |
| Eco57I | CTGAAG | 1 cut(s) | 925 |
| Eco88I | CYCGRG | 3 cut(s) | 86, 140, 212 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 212 |
| EcoRI | GAATTC | 1 cut(s) | 550 |
| EcoRII | CCWGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| EcoT14I | CCWWGG | 2 cut(s) | 369, 1057 |
| EcoT22I | ATGCAT | 1 cut(s) | 1116 |
| EcoT38I | GRGCYC | 2 cut(s) | 40, 203 |
| ErhI | CCWWGG | 2 cut(s) | 369, 1057 |
| FaeI | CATG | 8 cut(s) | 310, 373, 579, 785, 962, 1114, 1342, 1469 |
| FaqI | GGGAC | 5 cut(s) | 130, 257, 398, 682, 1002 |
| FatI | CATG | 8 cut(s) | 306, 369, 575, 781, 958, 1110, 1338, 1465 |
| FauI | CCCGC | 2 cut(s) | 234, 1263 |
| FbaI | TGATCA | 1 cut(s) | 1462 |
| FblI | GTMKAC | 3 cut(s) | 558, 976, 1524 |
| Fnu4HI | GCNGC | 5 cut(s) | 104, 219, 336, 339, 1066 |
| FokI | GGATG | 2 cut(s) | 598, 1235 |
| FriOI | GRGCYC | 2 cut(s) | 40, 203 |
| Fsp4HI | GCNGC | 5 cut(s) | 104, 219, 336, 339, 1066 |
| FspBI | CTAG | 3 cut(s) | 33, 624, 1038 |
| GlaI | GCGC | 3 cut(s) | 134, 187, 227 |
| GluI | GCNGC | 5 cut(s) | 104, 219, 336, 339, 1066 |
| GsaI | CCCAGC | 2 cut(s) | 462, 1164 |
| GsuI | CTGGAG | 3 cut(s) | 176, 455, 648 |
| HaeII | RGCGCY | 2 cut(s) | 136, 229 |
| HaeIII | GGCC | 7 cut(s) | 152, 218, 501, 777, 938, 1288, 1535 |
| HgaI | GACGC | 3 cut(s) | 167, 827, 1203 |
| HhaI | GCGC | 3 cut(s) | 135, 188, 228 |
| Hin1I | GRCGYC | 2 cut(s) | 159, 1214 |
| Hin1II | CATG | 8 cut(s) | 310, 373, 579, 785, 962, 1114, 1342, 1469 |
| Hin6I | GCGC | 3 cut(s) | 133, 186, 226 |
| HinP1I | GCGC | 3 cut(s) | 133, 186, 226 |
| HincII | GTYRAC | 1 cut(s) | 424 |
| HindII | GTYRAC | 1 cut(s) | 424 |
| HindIII | AAGCTT | 1 cut(s) | 482 |
| HinfI | GANTC | 9 cut(s) | 98, 143, 245, 608, 670, 851, 1078, 1096, 1231 |
| HpaI | GTTAAC | 1 cut(s) | 424 |
| HphI | GGTGA | 3 cut(s) | 103, 879, 919 |
| Hpy166II | GTNNAC | 5 cut(s) | 424, 559, 910, 977, 1525 |
| Hpy188III | TCNNGA | 8 cut(s) | 86, 281, 547, 594, 624, 1093, 1187, 1432 |
| Hpy8I | GTNNAC | 5 cut(s) | 424, 559, 910, 977, 1525 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 1219 |
| HpyAV | CCTTC | 8 cut(s) | 118, 136, 598, 788, 949, 1199, 1316, 1395 |
| HpyCH4III | ACNGT | 5 cut(s) | 409, 531, 824, 878, 1358 |
| HpyCH4IV | ACGT | 2 cut(s) | 561, 1008 |
| HpyCH4V | TGCA | 6 cut(s) | 338, 688, 818, 958, 1110, 1114 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 158, 740, 802, 1157 |
| HpyF3I | CTNAG | 7 cut(s) | 677, 1178, 1250, 1308, 1376, 1443, 1513 |
| HpySE526I | ACGT | 2 cut(s) | 561, 1008 |
| Hsp92I | GRCGYC | 2 cut(s) | 159, 1214 |
| Hsp92II | CATG | 8 cut(s) | 310, 373, 579, 785, 962, 1114, 1342, 1469 |
| HspAI | GCGC | 3 cut(s) | 133, 186, 226 |
| Ksp22I | TGATCA | 1 cut(s) | 1462 |
| KspAI | GTTAAC | 1 cut(s) | 424 |
| LmnI | GCTCC | 3 cut(s) | 206, 233, 731 |
| Lsp1109I | GCAGC | 3 cut(s) | 322, 350, 1077 |
| LweI | GCATC | 3 cut(s) | 1123, 1229, 1400 |
| MaeI | CTAG | 3 cut(s) | 33, 624, 1038 |
| MaeII | ACGT | 2 cut(s) | 561, 1008 |
| MaeIII | GTNAC | 3 cut(s) | 720, 1328, 1451 |
| MboII | GAAGA | 3 cut(s) | 665, 846, 1292 |
| MfeI | CAATTG | 2 cut(s) | 513, 913 |
| MflI | RGATCY | 4 cut(s) | 373, 518, 590, 626 |
| MhlI | GDGCHC | 3 cut(s) | 40, 203, 736 |
| MluCI | AATT | 6 cut(s) | 513, 550, 788, 913, 998, 1497 |
| MlyI | GAGTC | 5 cut(s) | 92, 152, 239, 617, 664 |
| MmeI | TCCRAC | 4 cut(s) | 120, 180, 591, 1197 |
| Mph1103I | ATGCAT | 1 cut(s) | 1116 |
| MseI | TTAA | 8 cut(s) | 423, 480, 635, 951, 984, 993, 1001, 1049 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1470 |
| MspCI | CTTAAG | 3 cut(s) | 479, 983, 992 |
| MspR9I | CCNGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| MunI | CAATTG | 2 cut(s) | 513, 913 |
| MvaI | CCWGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| MvnI | CGCG | 2 cut(s) | 63, 186 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 158, 740, 802, 1157 |
| NcoI | CCATGG | 1 cut(s) | 369 |
| NlaIII | CATG | 8 cut(s) | 310, 373, 579, 785, 962, 1114, 1342, 1469 |
| NlaIV | GGNNCC | 4 cut(s) | 202, 375, 1055, 1344 |
| NmuCI | GTSAC | 1 cut(s) | 720 |
| NsiI | ATGCAT | 1 cut(s) | 1116 |
| NspI | RCATGY | 1 cut(s) | 1114 |
| PaeI | GCATGC | 1 cut(s) | 1114 |
| PaeR7I | CTCGAG | 3 cut(s) | 86, 140, 212 |
| PceI | AGGCCT | 1 cut(s) | 152 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 93 |
| PfeI | GAWTC | 4 cut(s) | 851, 1078, 1096, 1231 |
| PkrI | GCNGC | 5 cut(s) | 105, 220, 337, 340, 1067 |
| Ple19I | CGATCG | 2 cut(s) | 184, 1035 |
| PleI | GAGTC | 5 cut(s) | 92, 151, 239, 616, 664 |
| PpsI | GAGTC | 5 cut(s) | 92, 151, 239, 616, 664 |
| PsiI | TTATAA | 2 cut(s) | 360, 966 |
| Psp6I | CCWGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| PspFI | CCCAGC | 2 cut(s) | 458, 1160 |
| PspGI | CCWGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| PspN4I | GGNNCC | 4 cut(s) | 202, 375, 1055, 1344 |
| PspPI | GGNCC | 3 cut(s) | 500, 1287, 1342 |
| PspXI | VCTCGAGB | 2 cut(s) | 140, 212 |
| PstI | CTGCAG | 1 cut(s) | 340 |
| PsuI | RGATCY | 4 cut(s) | 373, 518, 590, 626 |
| PvuI | CGATCG | 2 cut(s) | 184, 1035 |
| RsaI | GTAC | 1 cut(s) | 1007 |
| RsaNI | GTAC | 1 cut(s) | 1006 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1470 |
| SaqAI | TTAA | 8 cut(s) | 423, 480, 635, 951, 984, 993, 1001, 1049 |
| SatI | GCNGC | 5 cut(s) | 104, 219, 336, 339, 1066 |
| Sau96I | GGNCC | 3 cut(s) | 500, 1287, 1342 |
| SchI | GAGTC | 5 cut(s) | 92, 152, 239, 617, 664 |
| ScrFI | CCNGG | 5 cut(s) | 149, 235, 268, 498, 666 |
| SduI | GDGCHC | 3 cut(s) | 40, 203, 736 |
| SfaNI | GCATC | 3 cut(s) | 1123, 1229, 1400 |
| SfcI | CTRYAG | 2 cut(s) | 336, 555 |
| Sfr274I | CTCGAG | 3 cut(s) | 86, 140, 212 |
| SinI | GGWCC | 1 cut(s) | 1342 |
| SlaI | CTCGAG | 3 cut(s) | 86, 140, 212 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1470 |
| SmlI | CTYRAG | 6 cut(s) | 86, 140, 212, 479, 983, 992 |
| SmoI | CTYRAG | 6 cut(s) | 86, 140, 212, 479, 983, 992 |
| SphI | GCATGC | 1 cut(s) | 1114 |
| Sse9I | AATT | 6 cut(s) | 513, 550, 788, 913, 998, 1497 |
| SseBI | AGGCCT | 1 cut(s) | 152 |
| SsiI | CCGC | 7 cut(s) | 61, 104, 219, 231, 241, 431, 1270 |
| SspI | AATATT | 2 cut(s) | 394, 700 |
| SspMI | CTAG | 3 cut(s) | 33, 624, 1038 |
| StuI | AGGCCT | 1 cut(s) | 152 |
| StyD4I | CCNGG | 5 cut(s) | 147, 233, 266, 496, 664 |
| StyI | CCWWGG | 2 cut(s) | 369, 1057 |
| TaaI | ACNGT | 5 cut(s) | 409, 531, 824, 878, 1358 |
| TaiI | ACGT | 2 cut(s) | 564, 1011 |
| TasI | AATT | 6 cut(s) | 513, 550, 788, 913, 998, 1497 |
| TauI | GCSGC | 2 cut(s) | 106, 221 |
| TfiI | GAWTC | 4 cut(s) | 851, 1078, 1096, 1231 |
| Tru1I | TTAA | 8 cut(s) | 423, 480, 635, 951, 984, 993, 1001, 1049 |
| Tru9I | TTAA | 8 cut(s) | 423, 480, 635, 951, 984, 993, 1001, 1049 |
| TscAI | CASTG | 2 cut(s) | 816, 1363 |
| TseFI | GTSAC | 1 cut(s) | 720 |
| TseI | GCWGC | 3 cut(s) | 335, 338, 1065 |
| Tsp45I | GTSAC | 1 cut(s) | 720 |
| TspDTI | ATGAA | 3 cut(s) | 564, 770, 1521 |
| TspGWI | ACGGA | 1 cut(s) | 193 |
| TspRI | CASTG | 2 cut(s) | 816, 1363 |
| Vha464I | CTTAAG | 3 cut(s) | 479, 983, 992 |
| VpaK11BI | GGWCC | 1 cut(s) | 1342 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 212 |
| XapI | RAATTY | 1 cut(s) | 550 |
| XbaI | TCTAGA | 1 cut(s) | 623 |
| XceI | RCATGY | 1 cut(s) | 1114 |
| XhoI | CTCGAG | 3 cut(s) | 86, 140, 212 |
| XmiI | GTMKAC | 3 cut(s) | 558, 976, 1524 |
| XspI | CTAG | 3 cut(s) | 33, 624, 1038 |
| Zsp2I | ATGCAT | 1 cut(s) | 1116 |