Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008867

Physical Location & Seq

Genomic Coordinates Reverse (-)

22261546 .. 22264468

Gene Structure 2923 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G265900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 777 bp

ATGGATGAAACCCTCTCGCCAGAACCAGACTCAGAAGTTCCAAAAGAACTCAGGCCAGAAGGTCAGGCATCCAAAAGAAGGAAGGTGGTTCATGAGAAGACTGTTGTTACAGTGAAGATAGGAACAAATGTAGGGAAACTAAAGAACGAAGGGCCGCCTTCTGATTCTTGGTCATGGAGGAAATATGGGCAAAAACCTATCAAAGGATCACCTTATCCAAGAGGCTACTACAGGTGCAGTACATCAAAGGGTTGTTCTGCCAAAAAACAAGTGGAGAGAAGCAAAACTGATGCTTCAGTGCTCATAATCACCTACACTAGTAGCCATAATCATCCAGGCCCTGATGTCTCCACCACTAACTTGACCCAATTGCAACCCAGCACTGAAGATCATAATCTCCCGGCCCTACTTCCCAAACAGGAAGAGCAAGAGAAAGAGCAAGAAGAAAAACAAGGGAAACTAGAAGACCATCCTGCAATGAAAACTGATCATGAAGATCATTTTCACTACATTCAGTCCCCAATTAGATCTTCCCAAAATATTATGATTGACCAAGAAGAAGACCCTTTCCTAGAGAAAACCCATGTCTCTAGCACTCTTGGGTTCCTCTTGGATGAAGAGCCCCTCTCTTATTCCCAGCTCATGAGCTTCTCAACACCCAAATCTGAAGAAAATGACTTCTTTGATGAGCTTGAAGAACTACCCACATTTTCATCTTTCCCAAGCTTCATGAGGAGCAATCTCTCCCTTGAAAGGATTCCCTCTGTCCCCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

259

Amino Acids

29.29

Weight (kDa)

5.36

Isoelectric Point (pI)

67.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008867)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g39060 FvH4_5g39060
malus_domestica	MD00G1140800.v1.1 MD03G1292900.v1.1
prunus_persica	Prupe.8G265900_v2.0.a1 Prupe.8G265900_v2.0.a1
pyrus_communis	pycom03g23220 pycom11g27360
rosa_chinensis	RchiOBHm_Chr7g0241021 RchiOBHm_Chr7g0241041
rosa_laevigata	RLG00000000603
rosa_multiflora	Rmu_sc0003187.1_g000008
rosa_roxburghii	Rroxscaffold_3G00219310
rosa_rugosa	Rorug07G0341300 Rorug07G0341400 Rorug07G0341500
rosa_samantha	Rh7AG496600 Rh7AG497100 Rh7BG467800 Rh7CG513800 Rh7DG481000
rosa_wichuraiana	Rw0G005810 Rw7G041940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	155
AclWI	GGATC	1 cut(s)	214
AcuI	CTGAAG	3 cut(s)	279, 405, 687
AfaI	GTAC	1 cut(s)	241
AfiI	CCNNNNNNNGG	3 cut(s)	78, 203, 753
AgsI	TTSAA	2 cut(s)	695, 752
AhlI	ACTAGT	1 cut(s)	317
AjnI	CCWGG	1 cut(s)	334
AjuI	GAANNNNNNNTTGG	2 cut(s)	514, 546
AluBI	AGCT	4 cut(s)	640, 648, 691, 726
AluI	AGCT	4 cut(s)	640, 648, 691, 726
Alw21I	GWGCWC	1 cut(s)	303
Alw26I	GTCTC	2 cut(s)	352, 592
AlwI	GGATC	1 cut(s)	214
AlwNI	CAGNNNCTG	1 cut(s)	341
AoxI	GGCC	4 cut(s)	53, 152, 337, 402
Asp700I	GAANNNNTTC	1 cut(s)	756
AspS9I	GGNCC	3 cut(s)	152, 338, 403
AsuC2I	CCSGG	1 cut(s)	401
AsuHPI	GGTGA	2 cut(s)	201, 301
BanII	GRGCYC	1 cut(s)	624
BbsI	GAAGAC	3 cut(s)	104, 471, 567
Bbv12I	GWGCWC	1 cut(s)	303
BccI	CCATC	1 cut(s)	477
BciT130I	CCWGG	1 cut(s)	336
BclI	TGATCA	1 cut(s)	487
BcnI	CCSGG	1 cut(s)	401
BcoDI	GTCTC	2 cut(s)	352, 592
BcuI	ACTAGT	1 cut(s)	317
BfaI	CTAG	4 cut(s)	318, 461, 572, 591
BfmI	CTRYAG	1 cut(s)	229
BglII	AGATCT	1 cut(s)	527
BisI	GCNGC	1 cut(s)	155
BlsI	GCNGC	1 cut(s)	156
Bme1390I	CCNGG	2 cut(s)	336, 401
BmgT120I	GGNCC	3 cut(s)	152, 338, 403
BmiI	GGNNCC	1 cut(s)	605
BmrFI	CCNGG	2 cut(s)	336, 401
BmsI	GCATC	2 cut(s)	77, 280
BpiI	GAAGAC	3 cut(s)	104, 471, 567
BplI	GAGNNNNNCTC	2 cut(s)	611, 643
BpuMI	CCSGG	1 cut(s)	401
BsaBI	GATNNNNATC	1 cut(s)	393
Bsc4I	CCNNNNNNNGG	3 cut(s)	78, 203, 753
Bse3DI	GCAATG	1 cut(s)	483
Bse8I	GATNNNNATC	1 cut(s)	393
BseBI	CCWGG	1 cut(s)	336
BseGI	GGATG	5 cut(s)	10, 68, 331, 469, 619
BseJI	GATNNNNATC	1 cut(s)	393
BseLI	CCNNNNNNNGG	3 cut(s)	78, 203, 753
BseMI	GCAATG	1 cut(s)	483
BseMII	CTCAG	2 cut(s)	45, 64
BseRI	GAGGAG	1 cut(s)	748
BseYI	CCCAGC	2 cut(s)	377, 636
BsgI	GTGCAG	1 cut(s)	256
BshFI	GGCC	4 cut(s)	55, 154, 339, 404
BsiHKAI	GWGCWC	1 cut(s)	303
BsiSI	CCGG	1 cut(s)	401
BslFI	GGGAC	2 cut(s)	502, 752
BslI	CCNNNNNNNGG	3 cut(s)	78, 203, 753
BsmAI	GTCTC	2 cut(s)	352, 592
BsmFI	GGGAC	2 cut(s)	502, 752
BsnI	GGCC	4 cut(s)	55, 154, 339, 404
Bsp1286I	GDGCHC	2 cut(s)	303, 624
Bsp143I	GATC	5 cut(s)	206, 388, 487, 496, 527
BspACI	CCGC	1 cut(s)	155
BspANI	GGCC	4 cut(s)	55, 154, 339, 404
BspCNI	CTCAG	2 cut(s)	44, 63
BspHI	TCATGA	4 cut(s)	91, 490, 642, 729
BspLI	GGNNCC	1 cut(s)	605
BspPI	GGATC	1 cut(s)	214
BspQI	GCTCTTC	2 cut(s)	417, 612
BsrDI	GCAATG	1 cut(s)	483
BssMI	GATC	5 cut(s)	206, 388, 487, 496, 527
Bst2UI	CCWGG	1 cut(s)	336
Bst4CI	ACNGT	2 cut(s)	103, 112
Bst6I	CTCTTC	2 cut(s)	417, 612
BstDEI	CTNAG	2 cut(s)	31, 50
BstENI	CCTNNNNNAGG	1 cut(s)	201
BstF5I	GGATG	5 cut(s)	10, 68, 331, 469, 619
BstKTI	GATC	5 cut(s)	209, 391, 490, 499, 530
BstMAI	GTCTC	2 cut(s)	352, 592
BstMBI	GATC	5 cut(s)	206, 388, 487, 496, 527
BstNI	CCWGG	1 cut(s)	336
BstSCI	CCNGG	2 cut(s)	334, 399
BstSFI	CTRYAG	1 cut(s)	229
BstV2I	GAAGAC	3 cut(s)	104, 471, 567
BstX2I	RGATCY	1 cut(s)	527
BstYI	RGATCY	1 cut(s)	527
BsuRI	GGCC	4 cut(s)	55, 154, 339, 404
BtsCI	GGATG	5 cut(s)	10, 68, 331, 469, 619
BtsIMutI	CAGTG	3 cut(s)	117, 303, 381
CaiI	CAGNNNCTG	1 cut(s)	341
CciI	TCATGA	4 cut(s)	91, 490, 642, 729
Cfr13I	GGNCC	3 cut(s)	152, 338, 403
Csp6I	GTAC	1 cut(s)	240
CviAII	CATG	6 cut(s)	92, 174, 491, 584, 643, 730
CviQI	GTAC	1 cut(s)	240
DdeI	CTNAG	2 cut(s)	31, 50
DpnI	GATC	5 cut(s)	208, 390, 489, 498, 529
DpnII	GATC	5 cut(s)	206, 388, 487, 496, 527
Eam1104I	CTCTTC	2 cut(s)	417, 612
EarI	CTCTTC	2 cut(s)	417, 612
Eco24I	GRGCYC	1 cut(s)	624
Eco57I	CTGAAG	3 cut(s)	279, 405, 687
EcoNI	CCTNNNNNAGG	1 cut(s)	201
EcoO109I	RGGNCCY	1 cut(s)	338
EcoRII	CCWGG	1 cut(s)	334
EcoT38I	GRGCYC	1 cut(s)	624
FaeI	CATG	6 cut(s)	95, 177, 494, 587, 646, 733
FaqI	GGGAC	2 cut(s)	502, 752
FatI	CATG	6 cut(s)	91, 173, 490, 583, 642, 729
FbaI	TGATCA	1 cut(s)	487
Fnu4HI	GCNGC	1 cut(s)	155
FokI	GGATG	5 cut(s)	17, 55, 318, 456, 626
FriOI	GRGCYC	1 cut(s)	624
Fsp4HI	GCNGC	1 cut(s)	155
FspBI	CTAG	4 cut(s)	318, 461, 572, 591
GluI	GCNGC	1 cut(s)	155
GsaI	CCCAGC	2 cut(s)	381, 640
HaeIII	GGCC	4 cut(s)	55, 154, 339, 404
HapII	CCGG	1 cut(s)	401
Hin1II	CATG	6 cut(s)	95, 177, 494, 587, 646, 733
HindIII	AAGCTT	1 cut(s)	724
HinfI	GANTC	3 cut(s)	29, 164, 757
HpaII	CCGG	1 cut(s)	401
HphI	GGTGA	2 cut(s)	201, 301
Hpy188I	TCNGA	3 cut(s)	34, 163, 667
Hpy188III	TCNNGA	5 cut(s)	92, 491, 643, 730, 774
HpyAV	CCTTC	5 cut(s)	53, 72, 76, 143, 168
HpyCH4III	ACNGT	2 cut(s)	103, 112
HpyCH4V	TGCA	3 cut(s)	237, 373, 476
HpyF3I	CTNAG	2 cut(s)	31, 50
Hsp92II	CATG	6 cut(s)	95, 177, 494, 587, 646, 733
Ksp22I	TGATCA	1 cut(s)	487
Kzo9I	GATC	5 cut(s)	206, 388, 487, 496, 527
LguI	GCTCTTC	2 cut(s)	417, 612
LmnI	GCTCC	1 cut(s)	735
LweI	GCATC	2 cut(s)	77, 280
MaeI	CTAG	4 cut(s)	318, 461, 572, 591
MaeIII	GTNAC	1 cut(s)	106
MalI	GATC	5 cut(s)	208, 390, 489, 498, 529
MboI	GATC	5 cut(s)	206, 388, 487, 496, 527
MfeI	CAATTG	1 cut(s)	368
MflI	RGATCY	1 cut(s)	527
MhlI	GDGCHC	2 cut(s)	303, 624
MluCI	AATT	2 cut(s)	368, 522
MlyI	GAGTC	1 cut(s)	23
MnlI	CCTC	7 cut(s)	23, 171, 215, 617, 635, 726, 772
MroXI	GAANNNNTTC	1 cut(s)	756
MspI	CCGG	1 cut(s)	401
MspR9I	CCNGG	2 cut(s)	336, 401
MunI	CAATTG	1 cut(s)	368
MvaI	CCWGG	1 cut(s)	336
NciI	CCSGG	1 cut(s)	401
NdeII	GATC	5 cut(s)	206, 388, 487, 496, 527
NlaIII	CATG	6 cut(s)	95, 177, 494, 587, 646, 733
NlaIV	GGNNCC	1 cut(s)	605
PagI	TCATGA	4 cut(s)	91, 490, 642, 729
PciSI	GCTCTTC	2 cut(s)	417, 612
PdmI	GAANNNNTTC	1 cut(s)	756
PfeI	GAWTC	2 cut(s)	164, 757
PkrI	GCNGC	1 cut(s)	156
PleI	GAGTC	1 cut(s)	23
PpsI	GAGTC	1 cut(s)	23
Psp6I	CCWGG	1 cut(s)	334
PspFI	CCCAGC	2 cut(s)	377, 636
PspGI	CCWGG	1 cut(s)	334
PspN4I	GGNNCC	1 cut(s)	605
PspPI	GGNCC	3 cut(s)	152, 338, 403
PstNI	CAGNNNCTG	1 cut(s)	341
PsuI	RGATCY	1 cut(s)	527
RsaI	GTAC	1 cut(s)	241
RsaNI	GTAC	1 cut(s)	240
SapI	GCTCTTC	2 cut(s)	417, 612
SatI	GCNGC	1 cut(s)	155
Sau3AI	GATC	5 cut(s)	206, 388, 487, 496, 527
Sau96I	GGNCC	3 cut(s)	152, 338, 403
SchI	GAGTC	1 cut(s)	23
ScrFI	CCNGG	2 cut(s)	336, 401
SduI	GDGCHC	2 cut(s)	303, 624
SfaNI	GCATC	2 cut(s)	77, 280
SfcI	CTRYAG	1 cut(s)	229
SpeI	ACTAGT	1 cut(s)	317
Sse9I	AATT	2 cut(s)	368, 522
SsiI	CCGC	1 cut(s)	155
SspI	AATATT	1 cut(s)	541
SspMI	CTAG	4 cut(s)	318, 461, 572, 591
StyD4I	CCNGG	2 cut(s)	334, 399
TaaI	ACNGT	2 cut(s)	103, 112
TasI	AATT	2 cut(s)	368, 522
TatI	WGTACW	1 cut(s)	239
TauI	GCSGC	1 cut(s)	157
TfiI	GAWTC	2 cut(s)	164, 757
TscAI	CASTG	3 cut(s)	117, 303, 388
TspDTI	ATGAA	7 cut(s)	21, 80, 494, 507, 630, 702, 718
TspRI	CASTG	3 cut(s)	117, 303, 388
XagI	CCTNNNNNAGG	1 cut(s)	201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	268
XmnI	GAANNNNTTC	1 cut(s)	756
XspI	CTAG	4 cut(s)	318, 461, 572, 591

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.