Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0005393

Physical Location & Seq

Genomic Coordinates Forward (+)

3393586 .. 3395745

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g04540.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGAGTAGAAGCAACAGAAAGCGGTCTTCTAAATGGGATTTGGTAGAAGGGCCTCAATTTGAAGATGCAAATATGCAGGACAACGGTTGGATGGGAAAGGCAGGTAGGGCATTTCATCATAAGGAATCTGGACGTGACTGGCTTTCTCCGGAGACAAATGATCTGCACAGACCTAAGCATGATTTGGATTTGCCATCCAGGGAACCTTTGGCCGGAAGCAGAGGCTCACATAAAAATGAGAGTATCAATAAGGGATGCAATAGATACATGAATGACTCTATGGTGTGGGATGGAGATGGAAATTGCAGCACAAGGATGTCTCCTGGTCTTGATGAGTGGAGAGAACATCGCAGTCGGTCCCCAAAAAGTGGTTGGAGAAGGTCACTGAGAGGTAGGAGTAGAAGTAGAAGCAGGAGTAGGAGTAAGAGCCAGAGCTGGAGTAGGAGCCCTGATCGTGGTTATAGGCGGGAATCACTTTTCCTTGACAGAAATAGAGGCAGGCCAGGAATTTCAGCTCAATTGTGCAAAGATTTTATGACTGGGAGATGCAGGAGGGGTAGTGATTGCCAATTTCTTCATGAGGGTAATTCCAATTATGATGATAGCTGGGAAAGTCGACACAGGAAACGTGATGCTTCGAGATACTCTACCCCTCCTGATAACAAGTACTACCCATTAAAAAGTGAAAGATATTCTGTGTATTGTAGTGATTTTGCAAAAGGGAAGTGCCAGAGGGGGTCAACTTGCAAGTTCGATCACCATCGTGCTTCTGATGGATTCAGTAAAGGTTCTACAAATGAGAATACTAGAGAAAGGGAAAATGAAAGAAGGAACAGAGATACTTCTACAGAGCGAGGTGCCGAGCGTGTACCGCACAGGAGTAGTGATATTCCTTGCAAATTTTTTGCTGCTGGAAATTGTCGTAATAAAAAGAATTGTCGGTTTTCTCATCATATTCAAGCTCGTGCAAGTCCTGAAAGAAAGTCACAGGATGGCAGGTGGGGCCCAGGTCACAGTTTAAACGATGCAGGCCCAGCATGGAGTGGTCCAAAATGGAGTGATACCGGGACTCTGTCAGATGCCGCAATGTTGACTGTAGATAACAGAAATATTGGTGTTCCAGAGGTAAGGTCTAGTGCTTGGTCTGTAGATGATAATAGATGGGGGTGTGATCAGAACAATGAGAACAAAAATTGTGCTGACCGTAGTGTTAGTCATGAAGCAGTTGAGAGGAATGAGAAGGATGCAAATCTGTGGAATGAAGATAGTGTGGGTGCTCATGTGGATCTTCCTAAATTGAGAGATACTGAAAAATGGCTTGGTGACATGTCTCCTGATTGGAATTACACGGTGCAATCCTCCAACCATGTTGGGAAACAAGAGCATAGTCGCATTACTCGAGGTTCAGAACCTTCCACTCAGGTGCATGGTGCTGCTTCAATTATTGAACCAATGGTAGCTGAAAGATCTGATTTTCTGCAGAACAAGGATGTAAGGGTAGATGGAGTTATTTCCGTGCCATATGACAATAGGACTGCCATTGAAGAACCTTCTAGTTTTCGTAATAACCTAAATGTTACTGCAAATATCATGGCCCGCCAAAGCTTTGACCACAGTGGCCAGAGTTCAAGTGCTTTTCCTTTTTCTGGATTAAGCACAATTGGGCAAAGTAAAAACCTAATCCCATGCGGAGGAGTTGTAAAAAGTCCACAAGATACACTGTCCCCAGAGAGTAAATCTGTGACCAAGTTAGATATAGGGGATGCAAAAACTTCACTAGTTGATGGAATTCCTCAAGTTCCAAATTTGGTAGGTGGTAAAGAACTTACGGAACTTACCAATCTTTCAGCTTCTTTGGCTCAGTTACTTGGAAATCAGCAGCAACTTCCACAGATTTATGCTGCTTTAAATTCTCATAATGCACCTCTCCTTCCCAAATCTGAAGGATCCACTGAGCAACTTTTGGCAGCAGCTATTCAGCGCGATCCAACGGTGGTATCTCATAAGCCGTATCGATCCTATGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

676

Amino Acids

75.82

Weight (kDa)

9.18

Isoelectric Point (pI)

60.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G10553 AT3G18640 AT3G18640 AT3G18640
fragaria_vesca	FvH4_1g24100 FvH4_1g24100 FvH4_1g24100 FvH4_1g24100
malus_domestica	MD01G1013400.v1.1 MD15G1337600.v1.1
prunus_persica	Prupe.6G159100_v2.0.a1 Prupe.6G159100_v2.0.a1 Prupe.6G159100_v2.0.a1
pyrus_communis	pycom01g04540 pycom15g28880
rosa_chinensis	RchiOBHm_Chr2g0120281
rosa_laevigata	RLG00000018547
rosa_multiflora	Rmu_sc0004523.1_g000007 Rmu_sc0005045.1_g000049
rosa_roxburghii	Rroxscaffold_2G00123570
rosa_rugosa	Rorug02G0228100 Rorug02G0228200 Rorug02G0228300 Rorug02G0228400
rosa_samantha	Rh2AG284700 Rh2BG295700 Rh2CG273300 Rh2DG309700
rosa_wichuraiana	Rw2G022830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	987
Acc36I	ACCTGC	2 cut(s)	92, 987
AccB1I	GGYRCC	1 cut(s)	857
AccB7I	CCANNNNNTGG	1 cut(s)	368
AccI	GTMKAC	1 cut(s)	616
AccII	CGCG	1 cut(s)	1983
AccIII	TCCGGA	1 cut(s)	148
AciI	CCGC	6 cut(s)	22, 466, 872, 1083, 1597, 1689
AclWI	GGATC	5 cut(s)	1293, 1941, 1954, 1979, 2010
AcoI	YGGCCR	2 cut(s)	210, 1618
AcsI	RAATTY	5 cut(s)	507, 899, 1788, 1804, 1909
AcuI	CTGAAG	1 cut(s)	1962
AfaI	GTAC	2 cut(s)	668, 870
AfiI	CCNNNNNNNGG	5 cut(s)	212, 368, 455, 1646, 1691
AflIII	ACRYGT	1 cut(s)	1326
AgsI	TTSAA	6 cut(s)	62, 959, 1440, 1448, 1544, 1629
AhlI	ACTAGT	1 cut(s)	1777
AjiI	CACGTC	1 cut(s)	134
AjnI	CCWGG	4 cut(s)	197, 322, 502, 1006
AjuI	GAANNNNNNNTTGG	2 cut(s)	1302, 1334
AleI	CACNNNNGTG	2 cut(s)	762, 1421
AluBI	AGCT	8 cut(s)	435, 515, 606, 962, 1460, 1605, 1850, 1973
AluI	AGCT	8 cut(s)	435, 515, 606, 962, 1460, 1605, 1850, 1973
Alw21I	GWGCWC	1 cut(s)	1279
Alw26I	GTCTC	3 cut(s)	146, 324, 1335
AlwI	GGATC	5 cut(s)	1293, 1941, 1954, 1979, 2010
Ama87I	CYCGRG	1 cut(s)	1398
Aor13HI	TCCGGA	1 cut(s)	148
AoxI	GGCC	7 cut(s)	50, 210, 500, 1003, 1030, 1593, 1618
ApaI	GGGCCC	1 cut(s)	1007
ApeKI	GCWGC	7 cut(s)	306, 908, 1433, 1879, 1901, 1967, 1970
ApoI	RAATTY	5 cut(s)	507, 899, 1788, 1804, 1909
AspLEI	GCGC	1 cut(s)	1983
AspS9I	GGNCC	7 cut(s)	50, 357, 1003, 1004, 1031, 1046, 1594
AsuC2I	CCSGG	1 cut(s)	1066
AsuHPI	GGTGA	2 cut(s)	749, 1334
AvaI	CYCGRG	1 cut(s)	1398
AvaII	GGWCC	2 cut(s)	357, 1046
BaeGI	GKGCMC	1 cut(s)	1007
BaeI	ACNNNNGTAYC	2 cut(s)	1980, 2013
BalI	TGGCCA	1 cut(s)	1620
BamHI	GGATCC	1 cut(s)	1946
BanI	GGYRCC	1 cut(s)	857
BanII	GRGCYC	2 cut(s)	449, 1007
BauI	CACGAG	1 cut(s)	963
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	1 cut(s)	1279
BbvI	GCAGC	7 cut(s)	318, 895, 1420, 1888, 1891, 1979, 1982
BceAI	ACGGC	1 cut(s)	1993
BciT130I	CCWGG	4 cut(s)	199, 324, 504, 1008
BclI	TGATCA	1 cut(s)	1171
BcnI	CCSGG	1 cut(s)	1066
BcoDI	GTCTC	3 cut(s)	146, 324, 1335
BcuI	ACTAGT	1 cut(s)	1777
BfaI	CTAG	4 cut(s)	807, 1134, 1554, 1778
BfmI	CTRYAG	4 cut(s)	846, 1095, 1146, 1478
BfuAI	ACCTGC	2 cut(s)	92, 987
BglII	AGATCT	1 cut(s)	1466
BisI	GCNGC	8 cut(s)	307, 909, 1083, 1434, 1880, 1902, 1968, 1971
BlsI	GCNGC	8 cut(s)	308, 910, 1084, 1435, 1881, 1903, 1969, 1972
BmcAI	AGTACT	1 cut(s)	668
Bme1390I	CCNGG	5 cut(s)	199, 324, 504, 1008, 1066
Bme18I	GGWCC	2 cut(s)	357, 1046
BmeT110I	CYCGRG	1 cut(s)	1398
BmgBI	CACGTC	1 cut(s)	134
BmgT120I	GGNCC	7 cut(s)	50, 357, 1003, 1004, 1031, 1046, 1594
BmiI	GGNNCC	7 cut(s)	204, 359, 446, 859, 1004, 1005, 1948
BmrFI	CCNGG	5 cut(s)	199, 324, 504, 1008, 1066
BmrI	ACTGGG	1 cut(s)	549
BmsI	GCATC	8 cut(s)	55, 245, 536, 622, 1015, 1069, 1234, 1753
BmuI	ACTGGG	1 cut(s)	549
BpiI	GAAGAC	1 cut(s)	18
BpmI	CTGGAG	1 cut(s)	457
Bpu10I	CCTNAGC	1 cut(s)	174
BpuEI	CTTGAG	1 cut(s)	1779
BpuMI	CCSGG	1 cut(s)	1066
Bsa29I	ATCGAT	1 cut(s)	2014
BsaBI	GATNNNNATC	2 cut(s)	759, 1248
BsaJI	CCNNGG	2 cut(s)	198, 1006
BsaWI	WCCGGW	1 cut(s)	148
BsaXI	ACNNNNNCTCC	8 cut(s)	388, 406, 418, 436, 544, 574, 1683, 1713
Bsc4I	CCNNNNNNNGG	5 cut(s)	212, 368, 455, 1646, 1691
Bse1I	ACTGG	2 cut(s)	143, 544
Bse3DI	GCAATG	1 cut(s)	1092
Bse8I	GATNNNNATC	2 cut(s)	759, 1248
BseAI	TCCGGA	1 cut(s)	148
BseBI	CCWGG	4 cut(s)	199, 324, 504, 1008
BseCI	ATCGAT	1 cut(s)	2014
BseDI	CCNNGG	2 cut(s)	198, 1006
BseGI	GGATG	9 cut(s)	96, 194, 260, 295, 321, 997, 1249, 1495, 1768
BseJI	GATNNNNATC	2 cut(s)	759, 1248
BseLI	CCNNNNNNNGG	5 cut(s)	212, 368, 455, 1646, 1691
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	4 cut(s)	377, 1433, 1874, 1944
BseNI	ACTGG	2 cut(s)	143, 544
BseRI	GAGGAG	1 cut(s)	1707
BseSI	GKGCMC	1 cut(s)	1007
BseXI	GCAGC	7 cut(s)	318, 895, 1420, 1888, 1891, 1979, 1982
BseYI	CCCAGC	2 cut(s)	606, 1033
BsgI	GTGCAG	1 cut(s)	149
Bsh1236I	CGCG	1 cut(s)	1983
BshFI	GGCC	7 cut(s)	52, 212, 502, 1005, 1032, 1595, 1620
BshNI	GGYRCC	1 cut(s)	857
BshVI	ATCGAT	1 cut(s)	2014
BsiHKAI	GWGCWC	1 cut(s)	1279
BsiHKCI	CYCGRG	1 cut(s)	1398
BsiSI	CCGG	3 cut(s)	149, 213, 1065
BslFI	GGGAC	3 cut(s)	343, 1081, 1708
BslI	CCNNNNNNNGG	5 cut(s)	212, 368, 455, 1646, 1691
BsmAI	GTCTC	3 cut(s)	146, 324, 1335
BsmFI	GGGAC	3 cut(s)	343, 1081, 1708
BsnI	GGCC	7 cut(s)	52, 212, 502, 1005, 1032, 1595, 1620
BsoBI	CYCGRG	1 cut(s)	1398
Bsp120I	GGGCCC	1 cut(s)	1003
Bsp1286I	GDGCHC	3 cut(s)	449, 1007, 1279
Bsp13I	TCCGGA	1 cut(s)	148
Bsp143I	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
BspACI	CCGC	6 cut(s)	22, 466, 872, 1083, 1597, 1689
BspANI	GGCC	7 cut(s)	52, 212, 502, 1005, 1032, 1595, 1620
BspCNI	CTCAG	4 cut(s)	378, 1432, 1873, 1945
BspDI	ATCGAT	1 cut(s)	2014
BspEI	TCCGGA	1 cut(s)	148
BspFNI	CGCG	1 cut(s)	1983
BspHI	TCATGA	2 cut(s)	577, 1216
BspLI	GGNNCC	7 cut(s)	204, 359, 446, 859, 1004, 1005, 1948
BspMAI	CTGCAG	1 cut(s)	1482
BspMI	ACCTGC	2 cut(s)	92, 987
BspPI	GGATC	5 cut(s)	1293, 1941, 1954, 1979, 2010
BspT107I	GGYRCC	1 cut(s)	857
BsrDI	GCAATG	1 cut(s)	1092
BsrI	ACTGG	2 cut(s)	143, 544
BssECI	CCNNGG	2 cut(s)	198, 1006
BssMI	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
BssSI	CACGAG	1 cut(s)	963
Bst2BI	CACGAG	1 cut(s)	963
Bst2UI	CCWGG	4 cut(s)	199, 324, 504, 1008
Bst4CI	ACNGT	8 cut(s)	86, 1016, 1096, 1205, 1351, 1616, 1722, 1993
BstC8I	GCNNGC	3 cut(s)	500, 1030, 1597
BstDEI	CTNAG	5 cut(s)	174, 386, 1419, 1860, 1953
BstF5I	GGATG	9 cut(s)	96, 194, 260, 295, 321, 997, 1249, 1495, 1768
BstFNI	CGCG	1 cut(s)	1983
BstHHI	GCGC	1 cut(s)	1983
BstKTI	GATC	9 cut(s)	163, 454, 757, 1174, 1288, 1469, 1949, 1987, 2018
BstMAI	GTCTC	3 cut(s)	146, 324, 1335
BstMBI	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
BstMWI	GCNNNNNNNGC	5 cut(s)	107, 871, 1002, 1034, 1856
BstNI	CCWGG	4 cut(s)	199, 324, 504, 1008
BstNSI	RCATGY	1 cut(s)	1330
BstSCI	CCNGG	5 cut(s)	197, 322, 502, 1006, 1064
BstSFI	CTRYAG	4 cut(s)	846, 1095, 1146, 1478
BstSLI	GKGCMC	1 cut(s)	1007
BstUI	CGCG	1 cut(s)	1983
BstV1I	GCAGC	7 cut(s)	318, 895, 1420, 1888, 1891, 1979, 1982
BstV2I	GAAGAC	1 cut(s)	18
BstX2I	RGATCY	3 cut(s)	1285, 1466, 1946
BstYI	RGATCY	3 cut(s)	1285, 1466, 1946
Bsu15I	ATCGAT	1 cut(s)	2014
BsuRI	GGCC	7 cut(s)	52, 212, 502, 1005, 1032, 1595, 1620
BsuTUI	ATCGAT	1 cut(s)	2014
BtgZI	GCGATG	1 cut(s)	332
BtrI	CACGTC	1 cut(s)	134
BtsCI	GGATG	9 cut(s)	96, 194, 260, 295, 321, 997, 1249, 1495, 1768
BtsIMutI	CAGTG	4 cut(s)	383, 1621, 1718, 1950
BveI	ACCTGC	2 cut(s)	92, 987
Cac8I	GCNNGC	3 cut(s)	500, 1030, 1597
CciI	TCATGA	2 cut(s)	577, 1216
CfoI	GCGC	1 cut(s)	1983
Cfr13I	GGNCC	7 cut(s)	50, 357, 1003, 1004, 1031, 1046, 1594
ClaI	ATCGAT	1 cut(s)	2014
Csp6I	GTAC	2 cut(s)	667, 869
CviQI	GTAC	2 cut(s)	667, 869
DdeI	CTNAG	5 cut(s)	174, 386, 1419, 1860, 1953
DpnI	GATC	9 cut(s)	162, 453, 756, 1173, 1287, 1468, 1948, 1986, 2017
DpnII	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
DraI	TTTAAA	2 cut(s)	1020, 1908
EaeI	YGGCCR	2 cut(s)	210, 1618
Eco24I	GRGCYC	2 cut(s)	449, 1007
Eco47I	GGWCC	2 cut(s)	357, 1046
Eco57I	CTGAAG	1 cut(s)	1962
Eco88I	CYCGRG	1 cut(s)	1398
EcoO109I	RGGNCCY	2 cut(s)	50, 1003
EcoRI	GAATTC	1 cut(s)	1788
EcoRII	CCWGG	4 cut(s)	197, 322, 502, 1006
EcoT38I	GRGCYC	2 cut(s)	449, 1007
FaqI	GGGAC	3 cut(s)	343, 1081, 1708
FauI	CCCGC	2 cut(s)	459, 1604
FauNDI	CATATG	1 cut(s)	1522
FbaI	TGATCA	1 cut(s)	1171
FblI	GTMKAC	1 cut(s)	616
Fnu4HI	GCNGC	8 cut(s)	307, 909, 1083, 1434, 1880, 1902, 1968, 1971
FokI	GGATG	9 cut(s)	103, 181, 267, 302, 328, 1004, 1256, 1502, 1775
FriOI	GRGCYC	2 cut(s)	449, 1007
Fsp4HI	GCNGC	8 cut(s)	307, 909, 1083, 1434, 1880, 1902, 1968, 1971
FspBI	CTAG	4 cut(s)	807, 1134, 1554, 1778
GlaI	GCGC	1 cut(s)	1982
GluI	GCNGC	8 cut(s)	307, 909, 1083, 1434, 1880, 1902, 1968, 1971
GsaI	CCCAGC	2 cut(s)	610, 1037
GsuI	CTGGAG	1 cut(s)	457
HaeIII	GGCC	7 cut(s)	52, 212, 502, 1005, 1032, 1595, 1620
HapII	CCGG	3 cut(s)	149, 213, 1065
HhaI	GCGC	1 cut(s)	1983
Hin6I	GCGC	1 cut(s)	1981
HinP1I	GCGC	1 cut(s)	1981
HincII	GTYRAC	3 cut(s)	617, 741, 1092
HindII	GTYRAC	3 cut(s)	617, 741, 1092
HindIII	AAGCTT	1 cut(s)	1603
HinfI	GANTC	5 cut(s)	125, 275, 470, 777, 1069
HpaII	CCGG	3 cut(s)	149, 213, 1065
HphI	GGTGA	2 cut(s)	749, 1334
Hpy166II	GTNNAC	5 cut(s)	617, 741, 869, 1092, 1709
Hpy188I	TCNGA	6 cut(s)	772, 1078, 1176, 1408, 1471, 1942
Hpy8I	GTNNAC	5 cut(s)	617, 741, 869, 1092, 1709
HpyAV	CCTTC	8 cut(s)	41, 372, 822, 1234, 1422, 1560, 1937, 1940
HpyCH4III	ACNGT	8 cut(s)	86, 1016, 1096, 1205, 1351, 1616, 1722, 1993
HpyCH4IV	ACGT	2 cut(s)	133, 628
HpyF10VI	GCNNNNNNNGC	5 cut(s)	107, 871, 1002, 1034, 1856
HpyF3I	CTNAG	5 cut(s)	174, 386, 1419, 1860, 1953
HpySE526I	ACGT	2 cut(s)	133, 628
HspAI	GCGC	1 cut(s)	1981
Kpn2I	TCCGGA	1 cut(s)	148
Ksp22I	TGATCA	1 cut(s)	1171
Kzo9I	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
LmnI	GCTCC	1 cut(s)	444
Lsp1109I	GCAGC	7 cut(s)	318, 895, 1420, 1888, 1891, 1979, 1982
LweI	GCATC	8 cut(s)	55, 245, 536, 622, 1015, 1069, 1234, 1753
MaeI	CTAG	4 cut(s)	807, 1134, 1554, 1778
MaeII	ACGT	2 cut(s)	133, 628
MaeIII	GTNAC	8 cut(s)	134, 381, 984, 1010, 1322, 1576, 1741, 1863
MalI	GATC	9 cut(s)	162, 453, 756, 1173, 1287, 1468, 1948, 1986, 2017
MboI	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
MboII	GAAGA	6 cut(s)	18, 74, 566, 1274, 1280, 1556
MfeI	CAATTG	2 cut(s)	518, 1659
MflI	RGATCY	3 cut(s)	1285, 1466, 1946
MhlI	GDGCHC	3 cut(s)	449, 1007, 1279
MlsI	TGGCCA	1 cut(s)	1620
MluNI	TGGCCA	1 cut(s)	1620
MlyI	GAGTC	2 cut(s)	269, 1063
MmeI	TCCRAC	4 cut(s)	68, 353, 1386, 2012
Mox20I	TGGCCA	1 cut(s)	1620
MroI	TCCGGA	1 cut(s)	148
MscI	TGGCCA	1 cut(s)	1620
MseI	TTAA	4 cut(s)	677, 1019, 1652, 1907
MslI	CAYNNNNRTG	4 cut(s)	234, 314, 762, 1421
Msp20I	TGGCCA	1 cut(s)	1620
MspI	CCGG	3 cut(s)	149, 213, 1065
MspR9I	CCNGG	5 cut(s)	199, 324, 504, 1008, 1066
MssI	GTTTAAAC	1 cut(s)	1020
MunI	CAATTG	2 cut(s)	518, 1659
MvaI	CCWGG	4 cut(s)	199, 324, 504, 1008
MvnI	CGCG	1 cut(s)	1983
MwoI	GCNNNNNNNGC	5 cut(s)	107, 871, 1002, 1034, 1856
NciI	CCSGG	1 cut(s)	1066
NdeI	CATATG	1 cut(s)	1522
NdeII	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
NlaIV	GGNNCC	7 cut(s)	204, 359, 446, 859, 1004, 1005, 1948
NmeAIII	GCCGAG	1 cut(s)	886
NmuCI	GTSAC	6 cut(s)	134, 381, 984, 1010, 1322, 1741
NspI	RCATGY	1 cut(s)	1330
OliI	CACNNNNGTG	2 cut(s)	762, 1421
PaeR7I	CTCGAG	1 cut(s)	1398
PagI	TCATGA	2 cut(s)	577, 1216
PaqCI	CACCTGC	1 cut(s)	987
PciI	ACATGT	1 cut(s)	1326
PcsI	WCGNNNNNNNCGW	1 cut(s)	1396
PfeI	GAWTC	3 cut(s)	125, 470, 777
PflFI	GACNNNGTC	1 cut(s)	1072
PflMI	CCANNNNNTGG	1 cut(s)	368
PkrI	GCNGC	8 cut(s)	308, 910, 1084, 1435, 1881, 1903, 1969, 1972
PleI	GAGTC	2 cut(s)	269, 1063
PmeI	GTTTAAAC	1 cut(s)	1020
PpsI	GAGTC	2 cut(s)	269, 1063
PscI	ACATGT	1 cut(s)	1326
Psp6I	CCWGG	4 cut(s)	197, 322, 502, 1006
PspFI	CCCAGC	2 cut(s)	606, 1033
PspGI	CCWGG	4 cut(s)	197, 322, 502, 1006
PspN4I	GGNNCC	7 cut(s)	204, 359, 446, 859, 1004, 1005, 1948
PspOMI	GGGCCC	1 cut(s)	1003
PspPI	GGNCC	7 cut(s)	50, 357, 1003, 1004, 1031, 1046, 1594
PspXI	VCTCGAGB	1 cut(s)	1398
PstI	CTGCAG	1 cut(s)	1482
PsuI	RGATCY	3 cut(s)	1285, 1466, 1946
PsyI	GACNNNGTC	1 cut(s)	1072
RsaI	GTAC	2 cut(s)	668, 870
RsaNI	GTAC	2 cut(s)	667, 869
RseI	CAYNNNNRTG	4 cut(s)	234, 314, 762, 1421
SalI	GTCGAC	1 cut(s)	615
SaqAI	TTAA	4 cut(s)	677, 1019, 1652, 1907
SatI	GCNGC	8 cut(s)	307, 909, 1083, 1434, 1880, 1902, 1968, 1971
Sau3AI	GATC	9 cut(s)	160, 451, 754, 1171, 1285, 1466, 1946, 1984, 2015
Sau96I	GGNCC	7 cut(s)	50, 357, 1003, 1004, 1031, 1046, 1594
ScaI	AGTACT	1 cut(s)	668
SchI	GAGTC	2 cut(s)	269, 1063
ScrFI	CCNGG	5 cut(s)	199, 324, 504, 1008, 1066
SduI	GDGCHC	3 cut(s)	449, 1007, 1279
SfaNI	GCATC	8 cut(s)	55, 245, 536, 622, 1015, 1069, 1234, 1753
SfcI	CTRYAG	4 cut(s)	846, 1095, 1146, 1478
Sfr274I	CTCGAG	1 cut(s)	1398
SinI	GGWCC	2 cut(s)	357, 1046
SlaI	CTCGAG	1 cut(s)	1398
SmiMI	CAYNNNNRTG	4 cut(s)	234, 314, 762, 1421
SmlI	CTYRAG	2 cut(s)	1398, 1794
SmoI	CTYRAG	2 cut(s)	1398, 1794
SpeI	ACTAGT	1 cut(s)	1777
SsiI	CCGC	6 cut(s)	22, 466, 872, 1083, 1597, 1689
SspI	AATATT	1 cut(s)	1111
SspMI	CTAG	4 cut(s)	807, 1134, 1554, 1778
StyD4I	CCNGG	5 cut(s)	197, 322, 502, 1006, 1064
TaaI	ACNGT	8 cut(s)	86, 1016, 1096, 1205, 1351, 1616, 1722, 1993
TaiI	ACGT	2 cut(s)	136, 631
TaqI	TCGA	5 cut(s)	616, 638, 753, 1399, 2014
TaqII	GACCGA	1 cut(s)	345
TatI	WGTACW	1 cut(s)	666
TauI	GCSGC	1 cut(s)	1085
TfiI	GAWTC	3 cut(s)	125, 470, 777
Tru1I	TTAA	4 cut(s)	677, 1019, 1652, 1907
Tru9I	TTAA	4 cut(s)	677, 1019, 1652, 1907
TscAI	CASTG	4 cut(s)	390, 1621, 1725, 1957
TseFI	GTSAC	6 cut(s)	134, 381, 984, 1010, 1322, 1741
TseI	GCWGC	7 cut(s)	306, 908, 1433, 1879, 1901, 1967, 1970
Tsp45I	GTSAC	6 cut(s)	134, 381, 984, 1010, 1322, 1741
TspDTI	ATGAA	6 cut(s)	104, 284, 566, 837, 1233, 1275
TspGWI	ACGGA	2 cut(s)	1504, 1844
TspRI	CASTG	4 cut(s)	390, 1621, 1725, 1957
Tth111I	GACNNNGTC	1 cut(s)	1072
Van91I	CCANNNNNTGG	1 cut(s)	368
VpaK11BI	GGWCC	2 cut(s)	357, 1046
XapI	RAATTY	5 cut(s)	507, 899, 1788, 1804, 1909
XceI	RCATGY	1 cut(s)	1330
XcmI	CCANNNNNNNNNTGG	2 cut(s)	205, 369
XhoI	CTCGAG	1 cut(s)	1398
XmiI	GTMKAC	1 cut(s)	616
XspI	CTAG	4 cut(s)	807, 1134, 1554, 1778
ZrmI	AGTACT	1 cut(s)	668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.