Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0005393

Physical Location & Seq

Genomic Coordinates Forward (+)

25294480 .. 25299250

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g28880.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2658 bp

ATGAATAGAACCAGCCGAAAGCGGTCTTCTAAATGGGATTTGGTGGAAGAGCCTCAGTATGAAGATGTAAATATGCAGGACAATGGTTGGATGGGAAAGGCAGGCAGGCCATTTCGTCCTAAGGAATCTGGACGTGACTGGCCTTCTCCAGAGACAAATGATCTGCAGAGACCTAAGCAAGATTTGGATTTGCCTTCCAGGGAACCTTTGCCCGGAAGCAGAGGTTCACATAAGCATGAGAGTACGAATAAGAGATACAATAGATACATGGATGACTCTATGGTGTGGGATGGAGATGAAAATTGCAGCACAAGGATGTCTCCTGGTTTTGATGACTGGAAAGAACATCGTAGTCAGTCCCCAAAAAGTGGTTGGAAAAGGTCACTGAGAGGTAGGAGTAGAAGTAGAAGCAGGAGCTGGAGTAAGAGCCAGAGCTGGAGCAGGAGCCCTGATCATGGCTATAGGCGGGAATCACTTTTCCTCGACAGAAATAGAGGCAGGCCAGGAATTTCAGCTCAATTGTGCAAAGATTATATGACTGGGAGATGCAGGAGAGCTAGTGATTGCCAATTTCTCCATGAAGGTAATTCTAAGTATGATGATAGCTGGGAAAGTCGACACAGGAAACGTGGTGCTTTGAGATATGCTAGTCCTCCTGAAACAACCGAGTACTACCCATTAAAAAGTGAAAGATATTCTGTGTATTGTAGTGATTTTGTAAAAGGGAAGTGCCGCAAGGGTGCCTCTTGCAAGTTCGATCACCATCGTCCTTCTGATGGATTCAGCAAAGGTTCTACAATTGAGAATACGAGAGAAAGGGAAAATGAAAGAAGGAACAGAGATACTTCTATAGAGCGAGGTGCTGAGCGTGTATCACACAGAAGTGGCGATATTCCTTGCAAATTTTTTGCTGCGGGAAATTGTCGAAATAAAAAGTATTGTCGGTTTTCTCATCATATTCAAGCTTATATAAGTCCTGAAAGAAAGTCAAAGGATGTCCGGTGGGGCCCGGGTCACAGTTTAAATGATGCAGGCCCAGCATGGAATGGTCCAAAATGGAGTGATACCGTGACTCTGTCAGATGCCCCAATGTTGACTGTAGATAACAGAAATATTGGTGTTCCAGAGGTACGGTCTAGTGCTTGGTCTGTGGATGATAATAGATGGGGTTGCGATCAGAACGATGAGAACAAAAATTGTGCTGACCGTAATGTTAATCATGAAGCAGCTGAAAGGAATGAGAAGGATGCAAATCTGTGGAAGGAAGATAATGTGGGTGCTTGTGTGGATCTTCCCAAATCAAGAGATACTGAAAAATGGCTTGGTGACATGTCTCCTGATTGGAATTACACGGTGCAGTCCTCCAACCATGTTGGGAAACAAGAGCATGGTCACATTACGCAAGGTGCAGAACCTTCAACTCTGGTACATGGTGCCGCTTCAATTATTGAACCAGAGATAGCTGAAAGATCTGATTTTCTGCAGAACAAGGATCTGAGGGGAGATGGAGTTATTTCCTTGCCTTATGACAATAGGAATGCCATTGAAGAACCTTCTAGTTTTCGTAATAACCTAAGTGTTACTGCAAATATTGTAGGCTACCAAAGTTTTGACAACAGTGGCCAGAGTTCAAGTGCTTTTCCTTTTTCAGGATTGAGCACAATTGGGCAAAGTCAAACACTAATCCCAGGCAGAGGAATTGTAAAAAGTCCGCATGATACACTGTCCCCAGAGGGTAAATCTGTGAACAAATTAGATATAGGTGATGCAAAAACTTCACTAGTTGATGGAATTCCTCAAGTTCCAAGTTTGGTAGGTGGTAAAGAACTTAAGCAACTTACCAATCTTTCAGCCTCTCTGGCTCAGTTACTTGGAAATCGGCAGCAACTTCCACAGATTTATGCTGCTTTAAATTCTCATAATGCGGTGAGTACCCCAACTCTCCTTCCCCAATCCGAAGGATCTTCTGAGCAGCTTTTGGGAGCAACTTTTCAGCCTGATCCAGCCATGTTATCTCATAAGCCGTATGATCCTATATGTGATAGCATAGAACATAGAATTAATAACAATCAAATGTGCCTTTTGCCAAATAGTGCTGGAAACACAAGTGTTGATGGAAAAGTAGAGAAATTGTCAAATGTTGTATCTCCATCGTCTTTACCTAGCGGAGCAAATACAAACAATTATCATCAGACCAATAATCCAGTACAAGAACCCACACATAAGAATCACCAGTTAAGTCAGCTGGAGTGTGGGGCAAAACCTGAGGTTGTCAAGGGAAATGGTGAACTTGGGGCCGAGGAAATCAAGAGCGATCAGGAAGAAAATAATTCCCCAGTTAATGGTCCCATGGAGGTCACAGAAAAAGATGGTGCTGACGGGGGCAAGAAACTCAAGGAGGTGAAGGGGAGTCGTGCATTCAAATTTGCACTTGTGGAAAACGTTAAGGAGCTTTTAAAACCCTCATGGAAAGAAGGTCAAGTCAGCAAAGATGCTTACAAAACTATAGTGAAGAAGGTGGTTGATAAAGTGACCAGTACGATGCAGGGGGCTAATATTCCCCAGACCCAAGAGAAGATTGATCATTATCTATCATTTTCAAAACCAAAGCTTACTAAACTTGTACAGGCATATGTAGAAAAAATGCACAAGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH

Protein Analysis

886

Amino Acids

99.13

Weight (kDa)

8.67

Isoelectric Point (pI)

57.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005393)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G10553 AT3G18640 AT3G18640 AT3G18640
fragaria_vesca	FvH4_1g24100 FvH4_1g24100 FvH4_1g24100 FvH4_1g24100
malus_domestica	MD01G1013400.v1.1 MD15G1337600.v1.1
prunus_persica	Prupe.6G159100_v2.0.a1 Prupe.6G159100_v2.0.a1 Prupe.6G159100_v2.0.a1
pyrus_communis	pycom01g04540 pycom15g28880
rosa_chinensis	RchiOBHm_Chr2g0120281
rosa_laevigata	RLG00000018547
rosa_multiflora	Rmu_sc0004523.1_g000007 Rmu_sc0005045.1_g000049
rosa_roxburghii	Rroxscaffold_2G00123570
rosa_rugosa	Rorug02G0228100 Rorug02G0228200 Rorug02G0228300 Rorug02G0228400
rosa_samantha	Rh2AG284700 Rh2BG295700 Rh2CG273300 Rh2DG309700
rosa_wichuraiana	Rw2G022830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	740, 1433
AccB7I	CCANNNNNTGG	2 cut(s)	368, 2342
AccI	GTMKAC	1 cut(s)	616
AciI	CCGC	8 cut(s)	22, 466, 733, 914, 1437, 1712, 1925, 2166
AclI	AACGTT	1 cut(s)	2442
AclWI	GGATC	5 cut(s)	1296, 1500, 1969, 1994, 2024
AcoI	YGGCCR	1 cut(s)	1621
AcsI	RAATTY	5 cut(s)	507, 902, 1791, 1912, 2423
AfaI	GTAC	8 cut(s)	244, 671, 1131, 1428, 1933, 2208, 2539, 2625
AfiI	CCNNNNNNNGG	7 cut(s)	212, 368, 455, 776, 1649, 1694, 2342
AflII	CTTAAG	1 cut(s)	1829
AflIII	ACRYGT	1 cut(s)	1329
AgsI	TTSAA	8 cut(s)	962, 1419, 1443, 1451, 1547, 1632, 2422, 2601
AhlI	ACTAGT	1 cut(s)	1780
AjiI	CACGTC	1 cut(s)	134
AjnI	CCWGG	4 cut(s)	197, 322, 502, 1687
AjuI	GAANNNNNNNTTGG	2 cut(s)	1305, 1337
AleI	CACNNNNGTG	1 cut(s)	882
Alw21I	GWGCWC	1 cut(s)	1661
Alw26I	GTCTC	4 cut(s)	146, 163, 324, 1338
AlwI	GGATC	5 cut(s)	1296, 1500, 1969, 1994, 2024
AlwNI	CAGNNNCTG	1 cut(s)	417
Ama87I	CYCGRG	1 cut(s)	1009
AoxI	GGCC	8 cut(s)	107, 140, 500, 1006, 1033, 1621, 2295, 2652
ApaI	GGGCCC	1 cut(s)	1010
ApeKI	GCWGC	6 cut(s)	306, 911, 1226, 1882, 1904, 1972
ApoI	RAATTY	5 cut(s)	507, 902, 1791, 1912, 2423
AseI	ATTAAT	1 cut(s)	2061
AspS9I	GGNCC	6 cut(s)	1006, 1007, 1034, 1049, 2295, 2345
AsuC2I	CCSGG	3 cut(s)	213, 1010, 1011
AsuHPI	GGTGA	7 cut(s)	752, 1337, 1775, 1939, 2222, 2297, 2413
AvaI	CYCGRG	1 cut(s)	1009
AvaII	GGWCC	2 cut(s)	1049, 2345
AxyI	CCTNAGG	2 cut(s)	120, 2265
BaeGI	GKGCMC	1 cut(s)	1010
BalI	TGGCCA	1 cut(s)	1623
BanI	GGYRCC	2 cut(s)	740, 1433
BanII	GRGCYC	2 cut(s)	449, 1010
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	1 cut(s)	1661
BbvI	GCAGC	6 cut(s)	318, 898, 1238, 1891, 1894, 1984
BceAI	ACGGC	1 cut(s)	2008
BciT130I	CCWGG	4 cut(s)	199, 324, 504, 1689
BclI	TGATCA	2 cut(s)	451, 2581
BcnI	CCSGG	3 cut(s)	213, 1010, 1011
BcoDI	GTCTC	4 cut(s)	146, 163, 324, 1338
BcuI	ACTAGT	1 cut(s)	1780
BfaI	CTAG	6 cut(s)	558, 648, 1137, 1557, 1781, 2163
BfmI	CTRYAG	6 cut(s)	164, 460, 849, 1098, 1481, 2505
BfrI	CTTAAG	1 cut(s)	1829
BglI	GCCNNNNNGGC	1 cut(s)	1859
BglII	AGATCT	1 cut(s)	1469
BisI	GCNGC	8 cut(s)	307, 733, 912, 1227, 1437, 1883, 1905, 1973
BlpI	GCTNAGC	1 cut(s)	864
BlsI	GCNGC	8 cut(s)	308, 734, 913, 1228, 1438, 1884, 1906, 1974
BmcAI	AGTACT	1 cut(s)	671
Bme1390I	CCNGG	7 cut(s)	199, 213, 324, 504, 1010, 1011, 1689
Bme18I	GGWCC	2 cut(s)	1049, 2345
BmeT110I	CYCGRG	1 cut(s)	1009
BmgBI	CACGTC	1 cut(s)	134
BmgT120I	GGNCC	6 cut(s)	1006, 1007, 1034, 1049, 2295, 2345
BmiI	GGNNCC	8 cut(s)	204, 446, 742, 1007, 1008, 1435, 2296, 2347
BmrFI	CCNGG	7 cut(s)	199, 213, 324, 504, 1010, 1011, 1689
BmrI	ACTGGG	2 cut(s)	549, 2330
BmsI	GCATC	7 cut(s)	536, 1018, 1072, 1237, 1756, 2482, 2532
BmuI	ACTGGG	2 cut(s)	549, 2330
BpiI	GAAGAC	1 cut(s)	18
BpmI	CTGGAG	4 cut(s)	132, 439, 457, 2267
Bpu10I	CCTNAGC	1 cut(s)	174
Bpu1102I	GCTNAGC	1 cut(s)	864
BpuEI	CTTGAG	2 cut(s)	1782, 2378
BpuMI	CCSGG	3 cut(s)	213, 1010, 1011
BsaBI	GATNNNNATC	3 cut(s)	762, 1251, 2586
BsaI	GGTCTC	1 cut(s)	163
BsaJI	CCNNGG	5 cut(s)	198, 1009, 1687, 2298, 2349
BsaWI	WCCGGW	1 cut(s)	999
BsaXI	ACNNNNNCTCC	8 cut(s)	388, 406, 418, 436, 544, 574, 1494, 1524
Bsc4I	CCNNNNNNNGG	7 cut(s)	212, 368, 455, 776, 1649, 1694, 2342
Bse1I	ACTGG	7 cut(s)	143, 341, 544, 2204, 2233, 2336, 2535
Bse21I	CCTNAGG	2 cut(s)	120, 2265
Bse8I	GATNNNNATC	3 cut(s)	762, 1251, 2586
BseBI	CCWGG	4 cut(s)	199, 324, 504, 1689
BseDI	CCNNGG	5 cut(s)	198, 1009, 1687, 2298, 2349
BseGI	GGATG	7 cut(s)	96, 277, 295, 321, 1000, 1159, 1252
BseJI	GATNNNNATC	3 cut(s)	762, 1251, 2586
BseLI	CCNNNNNNNGG	7 cut(s)	212, 368, 455, 776, 1649, 1694, 2342
BseMII	CTCAG	7 cut(s)	68, 377, 855, 1487, 1877, 1959, 2256
BseNI	ACTGG	7 cut(s)	143, 341, 544, 2204, 2233, 2336, 2535
BseSI	GKGCMC	1 cut(s)	1010
BseXI	GCAGC	6 cut(s)	318, 898, 1238, 1891, 1894, 1984
BseYI	CCCAGC	2 cut(s)	606, 1036
BsgI	GTGCAG	2 cut(s)	1376, 1428
BshFI	GGCC	8 cut(s)	109, 142, 502, 1008, 1035, 1623, 2297, 2654
BshNI	GGYRCC	2 cut(s)	740, 1433
BsiHKAI	GWGCWC	1 cut(s)	1661
BsiHKCI	CYCGRG	1 cut(s)	1009
BsiSI	CCGG	3 cut(s)	213, 1000, 1010
BslFI	GGGAC	3 cut(s)	343, 1711, 2331
BslI	CCNNNNNNNGG	7 cut(s)	212, 368, 455, 776, 1649, 1694, 2342
BsmAI	GTCTC	4 cut(s)	146, 163, 324, 1338
BsmFI	GGGAC	3 cut(s)	343, 1711, 2331
BsmI	GAATGC	2 cut(s)	1543, 2417
BsnI	GGCC	8 cut(s)	109, 142, 502, 1008, 1035, 1623, 2297, 2654
Bso31I	GGTCTC	1 cut(s)	163
BsoBI	CYCGRG	1 cut(s)	1009
Bsp120I	GGGCCC	1 cut(s)	1006
Bsp1286I	GDGCHC	3 cut(s)	449, 1010, 1661
Bsp1407I	TGTACA	1 cut(s)	2623
Bsp1720I	GCTNAGC	1 cut(s)	864
Bsp19I	CCATGG	1 cut(s)	2349
BspACI	CCGC	8 cut(s)	22, 466, 733, 914, 1437, 1712, 1925, 2166
BspANI	GGCC	8 cut(s)	109, 142, 502, 1008, 1035, 1623, 2297, 2654
BspCNI	CTCAG	7 cut(s)	67, 378, 856, 1488, 1876, 1960, 2257
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	8 cut(s)	204, 446, 742, 1007, 1008, 1435, 2296, 2347
BspMAI	CTGCAG	2 cut(s)	168, 1485
BspPI	GGATC	5 cut(s)	1296, 1500, 1969, 1994, 2024
BspQI	GCTCTTC	1 cut(s)	42
BspT107I	GGYRCC	2 cut(s)	740, 1433
BspTI	CTTAAG	1 cut(s)	1829
BspTNI	GGTCTC	1 cut(s)	163
BsrGI	TGTACA	1 cut(s)	2623
BsrI	ACTGG	7 cut(s)	143, 341, 544, 2204, 2233, 2336, 2535
BssECI	CCNNGG	5 cut(s)	198, 1009, 1687, 2298, 2349
BssT1I	CCWWGG	1 cut(s)	2349
Bst2UI	CCWGG	4 cut(s)	199, 324, 504, 1689
Bst4CI	ACNGT	8 cut(s)	1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
Bst6I	CTCTTC	1 cut(s)	42
BstAFI	CTTAAG	1 cut(s)	1829
BstAUI	TGTACA	1 cut(s)	2623
BstC8I	GCNNGC	4 cut(s)	103, 107, 500, 1033
BstDSI	CCRYGG	1 cut(s)	2349
BstENI	CCTNNNNNAGG	1 cut(s)	1647
BstF5I	GGATG	7 cut(s)	96, 277, 295, 321, 1000, 1159, 1252
BstMAI	GTCTC	4 cut(s)	146, 163, 324, 1338
BstMWI	GCNNNNNNNGC	2 cut(s)	1037, 1859
BstNI	CCWGG	4 cut(s)	199, 324, 504, 1689
BstNSI	RCATGY	1 cut(s)	1333
BstSCI	CCNGG	7 cut(s)	197, 211, 322, 502, 1008, 1009, 1687
BstSFI	CTRYAG	6 cut(s)	164, 460, 849, 1098, 1481, 2505
BstSLI	GKGCMC	1 cut(s)	1010
BstV1I	GCAGC	6 cut(s)	318, 898, 1238, 1891, 1894, 1984
BstV2I	GAAGAC	1 cut(s)	18
BstX2I	RGATCY	4 cut(s)	1288, 1469, 1492, 1961
BstYI	RGATCY	4 cut(s)	1288, 1469, 1492, 1961
Bsu36I	CCTNAGG	2 cut(s)	120, 2265
BsuRI	GGCC	8 cut(s)	109, 142, 502, 1008, 1035, 1623, 2297, 2654
BtgI	CCRYGG	1 cut(s)	2349
BtrI	CACGTC	1 cut(s)	134
BtsCI	GGATG	7 cut(s)	96, 277, 295, 321, 1000, 1159, 1252
BtsIMutI	CAGTG	3 cut(s)	383, 1624, 1721
Cac8I	GCNNGC	4 cut(s)	103, 107, 500, 1033
CaiI	CAGNNNCTG	1 cut(s)	417
CciI	TCATGA	1 cut(s)	1219
Cfr13I	GGNCC	6 cut(s)	1006, 1007, 1034, 1049, 2295, 2345
Cfr9I	CCCGGG	1 cut(s)	1009
Csp6I	GTAC	8 cut(s)	243, 670, 1130, 1427, 1932, 2207, 2538, 2624
CviQI	GTAC	8 cut(s)	243, 670, 1130, 1427, 1932, 2207, 2538, 2624
DraI	TTTAAA	3 cut(s)	1023, 1911, 2457
EaeI	YGGCCR	1 cut(s)	1621
Eam1104I	CTCTTC	1 cut(s)	42
EarI	CTCTTC	1 cut(s)	42
Eco130I	CCWWGG	1 cut(s)	2349
Eco147I	AGGCCT	1 cut(s)	2654
Eco24I	GRGCYC	2 cut(s)	449, 1010
Eco31I	GGTCTC	1 cut(s)	163
Eco47I	GGWCC	2 cut(s)	1049, 2345
Eco81I	CCTNAGG	2 cut(s)	120, 2265
Eco88I	CYCGRG	1 cut(s)	1009
EcoNI	CCTNNNNNAGG	1 cut(s)	1647
EcoO109I	RGGNCCY	1 cut(s)	1006
EcoRI	GAATTC	1 cut(s)	1791
EcoRII	CCWGG	4 cut(s)	197, 322, 502, 1687
EcoT14I	CCWWGG	1 cut(s)	2349
EcoT38I	GRGCYC	2 cut(s)	449, 1010
ErhI	CCWWGG	1 cut(s)	2349
FaqI	GGGAC	3 cut(s)	343, 1711, 2331
FauI	CCCGC	2 cut(s)	459, 907
FauNDI	CATATG	1 cut(s)	2632
FbaI	TGATCA	2 cut(s)	451, 2581
FblI	GTMKAC	1 cut(s)	616
Fnu4HI	GCNGC	8 cut(s)	307, 733, 912, 1227, 1437, 1883, 1905, 1973
FokI	GGATG	7 cut(s)	103, 284, 302, 328, 1007, 1166, 1259
FriOI	GRGCYC	2 cut(s)	449, 1010
Fsp4HI	GCNGC	8 cut(s)	307, 733, 912, 1227, 1437, 1883, 1905, 1973
FspBI	CTAG	6 cut(s)	558, 648, 1137, 1557, 1781, 2163
GluI	GCNGC	8 cut(s)	307, 733, 912, 1227, 1437, 1883, 1905, 1973
GsaI	CCCAGC	2 cut(s)	610, 1040
GsuI	CTGGAG	4 cut(s)	132, 439, 457, 2267
HaeIII	GGCC	8 cut(s)	109, 142, 502, 1008, 1035, 1623, 2297, 2654
HapII	CCGG	3 cut(s)	213, 1000, 1010
HincII	GTYRAC	2 cut(s)	617, 1095
HindII	GTYRAC	2 cut(s)	617, 1095
HindIII	AAGCTT	2 cut(s)	963, 2609
HinfI	GANTC	7 cut(s)	125, 275, 470, 780, 1072, 2227, 2410
HpaII	CCGG	3 cut(s)	213, 1000, 1010
HphI	GGTGA	7 cut(s)	752, 1337, 1775, 1939, 2222, 2297, 2413
Hpy166II	GTNNAC	5 cut(s)	227, 617, 1095, 1747, 2288
Hpy188I	TCNGA	8 cut(s)	775, 1081, 1179, 1474, 1497, 1957, 1969, 2193
Hpy8I	GTNNAC	5 cut(s)	227, 617, 1095, 1747, 2288
HpyCH4III	ACNGT	8 cut(s)	1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
HpyCH4IV	ACGT	3 cut(s)	133, 628, 2442
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1037, 1859
HpySE526I	ACGT	3 cut(s)	133, 628, 2442
Ksp22I	TGATCA	2 cut(s)	451, 2581
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	6 cut(s)	414, 438, 444, 1982, 2168, 2449
Lsp1109I	GCAGC	6 cut(s)	318, 898, 1238, 1891, 1894, 1984
LweI	GCATC	7 cut(s)	536, 1018, 1072, 1237, 1756, 2482, 2532
MaeI	CTAG	6 cut(s)	558, 648, 1137, 1557, 1781, 2163
MaeII	ACGT	3 cut(s)	133, 628, 2442
MfeI	CAATTG	3 cut(s)	518, 798, 1662
MflI	RGATCY	4 cut(s)	1288, 1469, 1492, 1961
MhlI	GDGCHC	3 cut(s)	449, 1010, 1661
MlsI	TGGCCA	1 cut(s)	1623
MluNI	TGGCCA	1 cut(s)	1623
MlyI	GAGTC	3 cut(s)	269, 1066, 2419
MmeI	TCCRAC	3 cut(s)	68, 353, 1389
Mox20I	TGGCCA	1 cut(s)	1623
MscI	TGGCCA	1 cut(s)	1623
MslI	CAYNNNNRTG	3 cut(s)	234, 314, 882
Msp20I	TGGCCA	1 cut(s)	1623
MspA1I	CMGCKG	2 cut(s)	1229, 2245
MspCI	CTTAAG	1 cut(s)	1829
MspI	CCGG	3 cut(s)	213, 1000, 1010
MspR9I	CCNGG	7 cut(s)	199, 213, 324, 504, 1010, 1011, 1689
MunI	CAATTG	3 cut(s)	518, 798, 1662
Mva1269I	GAATGC	2 cut(s)	1543, 2417
MvaI	CCWGG	4 cut(s)	199, 324, 504, 1689
MwoI	GCNNNNNNNGC	2 cut(s)	1037, 1859
NciI	CCSGG	3 cut(s)	213, 1010, 1011
NcoI	CCATGG	1 cut(s)	2349
NdeI	CATATG	1 cut(s)	2632
NlaIV	GGNNCC	8 cut(s)	204, 446, 742, 1007, 1008, 1435, 2296, 2347
NmeAIII	GCCGAG	1 cut(s)	2323
NmuCI	GTSAC	8 cut(s)	134, 381, 1013, 1069, 1325, 1391, 2356, 2530
NspI	RCATGY	1 cut(s)	1333
OliI	CACNNNNGTG	1 cut(s)	882
PagI	TCATGA	1 cut(s)	1219
PceI	AGGCCT	1 cut(s)	2654
PciI	ACATGT	1 cut(s)	1329
PciSI	GCTCTTC	1 cut(s)	42
PctI	GAATGC	2 cut(s)	1543, 2417
PfeI	GAWTC	4 cut(s)	125, 470, 780, 2227
PflFI	GACNNNGTC	1 cut(s)	1075
PflMI	CCANNNNNTGG	2 cut(s)	368, 2342
PkrI	GCNGC	8 cut(s)	308, 734, 913, 1228, 1438, 1884, 1906, 1974
PleI	GAGTC	3 cut(s)	269, 1066, 2418
PpsI	GAGTC	3 cut(s)	269, 1066, 2418
PscI	ACATGT	1 cut(s)	1329
PshBI	ATTAAT	1 cut(s)	2061
Psp1406I	AACGTT	1 cut(s)	2442
Psp6I	CCWGG	4 cut(s)	197, 322, 502, 1687
PspFI	CCCAGC	2 cut(s)	606, 1036
PspGI	CCWGG	4 cut(s)	197, 322, 502, 1687
PspN4I	GGNNCC	8 cut(s)	204, 446, 742, 1007, 1008, 1435, 2296, 2347
PspOMI	GGGCCC	1 cut(s)	1006
PspPI	GGNCC	6 cut(s)	1006, 1007, 1034, 1049, 2295, 2345
PstI	CTGCAG	2 cut(s)	168, 1485
PstNI	CAGNNNCTG	1 cut(s)	417
PsuI	RGATCY	4 cut(s)	1288, 1469, 1492, 1961
PsyI	GACNNNGTC	1 cut(s)	1075
PvuII	CAGCTG	2 cut(s)	1229, 2245
RsaI	GTAC	8 cut(s)	244, 671, 1131, 1428, 1933, 2208, 2539, 2625
RsaNI	GTAC	8 cut(s)	243, 670, 1130, 1427, 1932, 2207, 2538, 2624
RseI	CAYNNNNRTG	3 cut(s)	234, 314, 882
SalI	GTCGAC	1 cut(s)	615
SapI	GCTCTTC	1 cut(s)	42
SatI	GCNGC	8 cut(s)	307, 733, 912, 1227, 1437, 1883, 1905, 1973
Sau96I	GGNCC	6 cut(s)	1006, 1007, 1034, 1049, 2295, 2345
ScaI	AGTACT	1 cut(s)	671
SchI	GAGTC	3 cut(s)	269, 1066, 2419
ScrFI	CCNGG	7 cut(s)	199, 213, 324, 504, 1010, 1011, 1689
SduI	GDGCHC	3 cut(s)	449, 1010, 1661
SfaNI	GCATC	7 cut(s)	536, 1018, 1072, 1237, 1756, 2482, 2532
SfcI	CTRYAG	6 cut(s)	164, 460, 849, 1098, 1481, 2505
SinI	GGWCC	2 cut(s)	1049, 2345
SmaI	CCCGGG	1 cut(s)	1011
SmiMI	CAYNNNNRTG	3 cut(s)	234, 314, 882
SmlI	CTYRAG	3 cut(s)	1797, 1829, 2393
SmoI	CTYRAG	3 cut(s)	1797, 1829, 2393
SpeI	ACTAGT	1 cut(s)	1780
SseBI	AGGCCT	1 cut(s)	2654
SsiI	CCGC	8 cut(s)	22, 466, 733, 914, 1437, 1712, 1925, 2166
SspI	AATATT	3 cut(s)	1114, 1591, 2557
SspMI	CTAG	6 cut(s)	558, 648, 1137, 1557, 1781, 2163
StuI	AGGCCT	1 cut(s)	2654
StyD4I	CCNGG	7 cut(s)	197, 211, 322, 502, 1008, 1009, 1687
StyI	CCWWGG	1 cut(s)	2349
TaaI	ACNGT	8 cut(s)	1019, 1069, 1099, 1134, 1208, 1354, 1619, 1725
TaiI	ACGT	3 cut(s)	136, 631, 2445
TaqI	TCGA	4 cut(s)	483, 616, 756, 925
TatI	WGTACW	3 cut(s)	669, 2206, 2623
TauI	GCSGC	2 cut(s)	735, 1439
TfiI	GAWTC	4 cut(s)	125, 470, 780, 2227
TscAI	CASTG	3 cut(s)	390, 1624, 1728
TseFI	GTSAC	8 cut(s)	134, 381, 1013, 1069, 1325, 1391, 2356, 2530
TseI	GCWGC	6 cut(s)	306, 911, 1226, 1882, 1904, 1972
Tsp45I	GTSAC	8 cut(s)	134, 381, 1013, 1069, 1325, 1391, 2356, 2530
TspDTI	ATGAA	6 cut(s)	17, 75, 312, 594, 840, 1236
TspMI	CCCGGG	1 cut(s)	1009
TspRI	CASTG	3 cut(s)	390, 1624, 1728
Tth111I	GACNNNGTC	1 cut(s)	1075
Van91I	CCANNNNNTGG	2 cut(s)	368, 2342
Vha464I	CTTAAG	1 cut(s)	1829
VpaK11BI	GGWCC	2 cut(s)	1049, 2345
VspI	ATTAAT	1 cut(s)	2061
XagI	CCTNNNNNAGG	1 cut(s)	1647
XapI	RAATTY	5 cut(s)	507, 902, 1791, 1912, 2423
XceI	RCATGY	1 cut(s)	1333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	369
XmaI	CCCGGG	1 cut(s)	1009
XmiI	GTMKAC	1 cut(s)	616
XspI	CTAG	6 cut(s)	558, 648, 1137, 1557, 1781, 2163
ZrmI	AGTACT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.