Rh2DG309700

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0005393
Physical Location & Seq
Forward (+)
37961221 .. 37971127
9907 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG309700.1

Sequence Viewer

Length: 2556 bp
ATGTGCAGGGTTAGGAGTAGAAGTAGAAGCTGGACCAGGAGTAGAAGCCAGAGCTGGAGCAGGAGTCCAGATCGTGGCTATAGGCGAGAATCAGTTTTCCTTGATAGAAATAGAAGCAGATCGGGAGTTTCAGCTCAAGTGTGCAAAGATTTTGCTGGTGGAAGATGCAGGAGAGGAAGTGATTGTCAGTTACTACATGAGGGTAATTCAAGTTATGATGATAGCTGGGAAGGTAGGCACAGGAATGGCAGCGCCTCAAAATATTCTACACCCCCTGTTTCAGGGGACAATCCATTAAAGACTGGAAGGTCTTCGGTGTATGGTAATGATTTCATTAATGGGAAGTCTAGGAGGGAGGCATCTAGCAAGTTTGATAATCACCGAGTTTCTGATGGGTTCAGTAAAGGTTCTGCAAATGAGATTATTAGAGAAAGGGACAATGATAGAGAAAGGGACAGTGATAGAAGGAGAAGAGATGCTTCTACAGAGCGAGGTGTTGAGCGTGAACCCCGCAGGAGTGGTGATATTCCTTGCAAATTTTTTGCCGCGGGAAATTGTCGGAACAAAAAGTTTTGTCGGTTTTCCCATCATATTCAGTCACATGCAAGTTCTGAAAGAAGGTCACGGGATGACAGGTGGGGATTGGGCCACAGTTTAAATGATACAGACCAGGCATGGAATGGTCGAAAATGGAATGACACTCCGTCAGATTCTGCAAAGTTGAGTCCAGATAATACTGGAAGGCCACGGGATGGCAGATGGGCCCTGGGCCACAAAATAAATGATGCAGACCAGGCATGGGATGGTCAAAAATGGAGTGATACTGTGACTCTGCCAGAGTCGGCAAAGTTGGGTGCAGATAATAACGGAAATATTGGTGTTCCAGAGCTGAGGTCTAGTGCTTGGTCTATGAATGATAATAGTTGGGGGCGTGGTCTGAACAACGAGAACCAAATGCGTGGTGACCCAAGTGTTAGTCATGAAGCAGCAAAGAGGAATGAGAAGGAAGCACAACTGTGGAAGGAGGATAAAGTAGGTGCTAAGTCAAAAGATACTGAAAAATGGCTCGGAGATATGTCTCCAGATTGGAATTATACATTGCAATCCTCCAATATTGGGAAAGAAGAGCATGGTCACATTAGACGGGGTTCAGAAATTTCGAGAATTAGTGATACTTCTTTAAATGCTTGCAAACAAGATATGTCTCCGGAATGGAATTATACATTGCAAACGTCCAACAATATTAGCAGAGAAGAGCATGGTCACAGTGCACGGGGTTCAGAATCTTCAAGACTTAATGATACTTCTCTAAAAGCTAGCAATCAAGATATAATTCGAGAGGCATCAGTCCAGGTACATGGTGGTGCTTCAGTTATGCAACCAATGATAGCTGAAAGATCTAATTATCTACAGAACCAGGATATAAGGGAAGGTGGTTCTATTGGATTGCCACATGATGGCAAGAATGCAATTGATAGAACTGCTAGTTCTCGCACTGACCTTAATGTTTCTGCAAATATCATGTCACACCAAAGCTTTGACCATAATGTGCAGAGTTCAACTGCTTCTCCCTTTCCTGGCATGAACACAATCGGGCAAAGTCAAGCACTTAACCCAGCTCACACCCAAGGAGGACTTGTAAATCCACAAGATACACTATCTGGACAGAGGAAATCTGTCATCAAGTTAGATATAGGGGATTCAAAAACATCACTAGTTACTGGCCTTCCTCCAGTGCCTAATGTGGTAGGTGGTAAAGATCTCACACAACTTACCAGTCTTTCAGTCTCGCTGGCACAGTTATTGGAAAATGGACATCAGCTTCCACAGCTTTATGCTGCTTTAAATTCTCATAATGCATTGAATGCTCCTCCATTTCCCAAATCTGAAGGATCTTCTGAGCAGCTTTCAGCTATTCAGCCAGAACCAGCCATGTTGTCTCAGAAGCCATATGATCCTACATCTGATAGCATGGAACTTAAGAAGCAAGAACACAATAACAACAAAGCGTGCCTTCTGCCAAATAGCACAGGGAAGACAGGTGTTGATGGAAAATTTAGCACAGGGAAGACAGGTGTTGATGGAAAATTAGAAAAGCCGTCAGATGATTACCATCAGATTCGTAATTCAGTAGAAGAACCTAGGCGTAAGAGCCACCAGTTGAATCAGCCTGATGGAAATAATGAACTTGGTGTTGAGGAAAGTAAGAAAGTAGAAGAAGAGAATAACTCCCCCGAGAATGGTCCCTTGGAGGTCGCAGATAAAGATGGGCCTGATGAGGGCAAGAAACTCAAGGAAGTGAAGGGGATACGTGCATTTAAATTTGCTCTTGCGGAGTTCGTTAAGGATCTTTTAAAACCCTCATGGAAAGATGGTCAAGTCAGCAAAGATGCATACAAAACCATAGTGAAGAAGGTGGTTGACAAAGTGACTGGTACCATACCGGGGGCTAATATTCCACAGACACAAGAAAAGATTGACAGTTATTTGTCATTTTCAAAACCGAAGCTGACAAAACTTGTACAGGCATATGTGGAAAAAATGCAAAAAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH

Protein Analysis

851

Amino Acids

94.34

Weight (kDa)

8.98

Isoelectric Point (pI)

52.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAF11-like_C PF23030 778 - 849 3.7e-06 SCAF11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 307
Acc65I GGTACC 1 cut(s) 2435
AccB1I GGYRCC 1 cut(s) 2435
AccB7I CCANNNNNTGG 3 cut(s) 74, 752, 1457
AccII CGCG 1 cut(s) 548
AccIII TCCGGA 1 cut(s) 1207
AciI CCGC 4 cut(s) 511, 546, 548, 2333
AclWI GGATC 3 cut(s) 1900, 1949, 2355
AcsI RAATTY 5 cut(s) 536, 1155, 1846, 2054, 2321
AcuI CTGAAG 2 cut(s) 1353, 1908
AfaI GTAC 3 cut(s) 1356, 2437, 2523
AflII CTTAAG 1 cut(s) 1979
AgsI TTSAA 7 cut(s) 210, 1290, 1560, 1704, 1864, 2164, 2499
AhdI GACNNNNNGTC 1 cut(s) 703
AhlI ACTAGT 1 cut(s) 1714
AjnI CCWGG 7 cut(s) 35, 669, 765, 792, 1350, 1416, 1576
AjuI GAANNNNNNNTTGG 2 cut(s) 2231, 2263
AleI CACNNNNGTG 1 cut(s) 1015
Alw21I GWGCWC 1 cut(s) 1273
Alw26I GTCTC 4 cut(s) 1083, 1209, 1792, 1944
Alw44I GTGCAC 1 cut(s) 1269
AlwI GGATC 3 cut(s) 1900, 1949, 2355
AlwNI CAGNNNCTG 1 cut(s) 713
Ama87I CYCGRG 1 cut(s) 2234
Aor13HI TCCGGA 1 cut(s) 1207
AoxI GGCC 6 cut(s) 646, 743, 762, 769, 1723, 2270
ApaI GGGCCC 1 cut(s) 766
ApaLI GTGCAC 1 cut(s) 1269
ApeKI GCWGC 4 cut(s) 249, 986, 1838, 1903
ApoI RAATTY 5 cut(s) 536, 1155, 1846, 2054, 2321
ArsI GACNNNNNNTTYG 2 cut(s) 1508, 1540
AseI ATTAAT 1 cut(s) 336
Asp700I GAANNNNTTC 1 cut(s) 310
Asp718I GGTACC 1 cut(s) 2435
AspA2I CCTAGG 1 cut(s) 2141
AspLEI GCGC 1 cut(s) 254
AspS9I GGNCC 7 cut(s) 33, 646, 762, 763, 769, 2243, 2270
AsuC2I CCSGG 1 cut(s) 2445
AsuHPI GGTGA 3 cut(s) 371, 533, 974
AsuNHI GCTAGC 1 cut(s) 1316
AvaI CYCGRG 1 cut(s) 2234
AvaII GGWCC 2 cut(s) 33, 2243
AvrII CCTAGG 1 cut(s) 2141
BaeGI GKGCMC 2 cut(s) 766, 1273
BanI GGYRCC 1 cut(s) 2435
BanII GRGCYC 1 cut(s) 766
BbsI GAAGAC 3 cut(s) 303, 2042, 2075
Bbv12I GWGCWC 1 cut(s) 1273
BbvCI CCTCAGC 1 cut(s) 890
BbvI GCAGC 4 cut(s) 261, 998, 1825, 1915
BceAI ACGGC 1 cut(s) 2083
BciT130I CCWGG 7 cut(s) 37, 671, 767, 794, 1352, 1418, 1578
BciVI GTATCC 1 cut(s) 2301
BcnI CCSGG 1 cut(s) 2445
BcoDI GTCTC 4 cut(s) 1083, 1209, 1792, 1944
BcuI ACTAGT 1 cut(s) 1714
BfaI CTAG 7 cut(s) 348, 363, 897, 1317, 1485, 1715, 2142
BfmI CTRYAG 3 cut(s) 79, 483, 1409
BfoI RGCGCY 1 cut(s) 255
BfrI CTTAAG 1 cut(s) 1979
BfuI GTATCC 1 cut(s) 2301
BglII AGATCT 2 cut(s) 1397, 1759
BisI GCNGC 5 cut(s) 250, 546, 987, 1839, 1904
BlnI CCTAGG 1 cut(s) 2141
BlsI GCNGC 5 cut(s) 251, 547, 988, 1840, 1905
Bme1390I CCNGG 8 cut(s) 37, 671, 767, 794, 1352, 1418, 1578, 2445
Bme18I GGWCC 2 cut(s) 33, 2243
BmeRI GACNNNNNGTC 1 cut(s) 703
BmeT110I CYCGRG 1 cut(s) 2234
BmgT120I GGNCC 7 cut(s) 33, 646, 762, 763, 769, 2243, 2270
BmiI GGNNCC 3 cut(s) 764, 2245, 2437
BmrFI CCNGG 8 cut(s) 37, 671, 767, 794, 1352, 1418, 1578, 2445
BmsI GCATC 6 cut(s) 155, 368, 466, 775, 1352, 2380
BmtI GCTAGC 1 cut(s) 1320
BpiI GAAGAC 3 cut(s) 303, 2042, 2075
BplI GAGNNNNNCTC 2 cut(s) 2213, 2245
BpmI CTGGAG 3 cut(s) 76, 1065, 1716
Bpu10I CCTNAGC 1 cut(s) 890
BpuEI CTTGAG 2 cut(s) 120, 2276
BpuMI CCSGG 1 cut(s) 2445
BsaAI YACGTR 1 cut(s) 2312
BsaBI GATNNNNATC 1 cut(s) 2112
BsaJI CCNNGG 8 cut(s) 546, 746, 765, 766, 1627, 2141, 2247, 2444
BsaWI WCCGGW 1 cut(s) 1207
Bse1I ACTGG 7 cut(s) 307, 742, 1726, 1733, 1776, 2158, 2437
Bse3DI GCAATG 2 cut(s) 1097, 1223
Bse8I GATNNNNATC 1 cut(s) 2112
BseAI TCCGGA 1 cut(s) 1207
BseBI CCWGG 7 cut(s) 37, 671, 767, 794, 1352, 1418, 1578
BseDI CCNNGG 8 cut(s) 546, 746, 765, 766, 1627, 2141, 2247, 2444
BseGI GGATG 3 cut(s) 634, 757, 808
BseJI GATNNNNATC 1 cut(s) 2112
BseMI GCAATG 2 cut(s) 1097, 1223
BseMII CTCAG 3 cut(s) 881, 1890, 1955
BseNI ACTGG 7 cut(s) 307, 742, 1726, 1733, 1776, 2158, 2437
BseRI GAGGAG 1 cut(s) 1860
BseSI GKGCMC 2 cut(s) 766, 1273
BseXI GCAGC 4 cut(s) 261, 998, 1825, 1915
BseYI CCCAGC 2 cut(s) 225, 1615
BsgI GTGCAG 3 cut(s) 25, 876, 1571
Bsh1236I CGCG 1 cut(s) 548
BshFI GGCC 6 cut(s) 648, 745, 764, 771, 1725, 2272
BshNI GGYRCC 1 cut(s) 2435
BsiHKAI GWGCWC 1 cut(s) 1273
BsiHKCI CYCGRG 1 cut(s) 2234
BsiSI CCGG 2 cut(s) 1208, 2444
BslFI GGGAC 4 cut(s) 299, 449, 467, 2229
BsmAI GTCTC 4 cut(s) 1083, 1209, 1792, 1944
BsmFI GGGAC 4 cut(s) 299, 449, 467, 2229
BsmI GAATGC 2 cut(s) 1471, 1870
BsnI GGCC 6 cut(s) 648, 745, 764, 771, 1725, 2272
BsoBI CYCGRG 1 cut(s) 2234
Bsp120I GGGCCC 1 cut(s) 762
Bsp1286I GDGCHC 2 cut(s) 766, 1273
Bsp13I TCCGGA 1 cut(s) 1207
Bsp1407I TGTACA 1 cut(s) 2521
Bsp143I GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
BspACI CCGC 4 cut(s) 511, 546, 548, 2333
BspANI GGCC 6 cut(s) 648, 745, 764, 771, 1725, 2272
BspCNI CTCAG 3 cut(s) 882, 1891, 1954
BspEI TCCGGA 1 cut(s) 1207
BspFNI CGCG 1 cut(s) 548
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 3 cut(s) 764, 2245, 2437
BspOI GCTAGC 1 cut(s) 1320
BspPI GGATC 3 cut(s) 1900, 1949, 2355
BspQI GCTCTTC 2 cut(s) 1119, 1248
BspT107I GGYRCC 1 cut(s) 2435
BspTI CTTAAG 1 cut(s) 1979
BsrDI GCAATG 2 cut(s) 1097, 1223
BsrGI TGTACA 1 cut(s) 2521
BsrI ACTGG 7 cut(s) 307, 742, 1726, 1733, 1776, 2158, 2437
BssECI CCNNGG 8 cut(s) 546, 746, 765, 766, 1627, 2141, 2247, 2444
BssMI GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
BssT1I CCWWGG 3 cut(s) 1627, 2141, 2247
Bst2UI CCWGG 7 cut(s) 37, 671, 767, 794, 1352, 1418, 1578
Bst4CI ACNGT 7 cut(s) 458, 653, 826, 1017, 1268, 1800, 2483
Bst6I CTCTTC 4 cut(s) 466, 1119, 1248, 2214
BstAFI CTTAAG 1 cut(s) 1979
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstAUI TGTACA 1 cut(s) 2521
BstBAI YACGTR 1 cut(s) 2312
BstC8I GCNNGC 4 cut(s) 1189, 1318, 1794, 2011
BstDEI CTNAG 4 cut(s) 890, 1041, 1899, 1941
BstDSI CCRYGG 2 cut(s) 546, 746
BstEII GGTNACC 1 cut(s) 962
BstENI CCTNNNNNAGG 1 cut(s) 279
BstF5I GGATG 3 cut(s) 634, 757, 808
BstFNI CGCG 1 cut(s) 548
BstH2I RGCGCY 1 cut(s) 255
BstHHI GCGC 1 cut(s) 254
BstKTI GATC 7 cut(s) 73, 122, 1400, 1762, 1895, 1957, 2350
BstMAI GTCTC 4 cut(s) 1083, 1209, 1792, 1944
BstMBI GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
BstMWI GCNNNNNNNGC 3 cut(s) 794, 1828, 1865
BstNI CCWGG 7 cut(s) 37, 671, 767, 794, 1352, 1418, 1578
BstNSI RCATGY 1 cut(s) 605
BstPI GGTNACC 1 cut(s) 962
BstSCI CCNGG 8 cut(s) 35, 669, 765, 792, 1350, 1416, 1576, 2443
BstSFI CTRYAG 3 cut(s) 79, 483, 1409
BstSLI GKGCMC 2 cut(s) 766, 1273
BstUI CGCG 1 cut(s) 548
BstV1I GCAGC 4 cut(s) 261, 998, 1825, 1915
BstV2I GAAGAC 3 cut(s) 303, 2042, 2075
BstX2I RGATCY 4 cut(s) 1397, 1759, 1892, 2347
BstXI CCANNNNNNTGG 2 cut(s) 959, 1358
BstYI RGATCY 4 cut(s) 1397, 1759, 1892, 2347
BsuI GTATCC 1 cut(s) 2301
BsuRI GGCC 6 cut(s) 648, 745, 764, 771, 1725, 2272
BtgI CCRYGG 2 cut(s) 546, 746
BtsCI GGATG 3 cut(s) 634, 757, 808
BtsIMutI CAGTG 4 cut(s) 463, 1273, 1494, 1740
Cac8I GCNNGC 4 cut(s) 1189, 1318, 1794, 2011
CaiI CAGNNNCTG 1 cut(s) 713
CciI TCATGA 1 cut(s) 979
CfoI GCGC 1 cut(s) 254
Cfr13I GGNCC 7 cut(s) 33, 646, 762, 763, 769, 2243, 2270
Cfr42I CCGCGG 1 cut(s) 549
Csp6I GTAC 3 cut(s) 1355, 2436, 2522
CviQI GTAC 3 cut(s) 1355, 2436, 2522
DdeI CTNAG 4 cut(s) 890, 1041, 1899, 1941
DpnI GATC 7 cut(s) 72, 121, 1399, 1761, 1894, 1956, 2349
DpnII GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
DraI TTTAAA 5 cut(s) 657, 1182, 1845, 2320, 2355
DrdI GACNNNNNNGTC 1 cut(s) 307
DriI GACNNNNNGTC 1 cut(s) 703
DseDI GACNNNNNNGTC 1 cut(s) 307
Eam1104I CTCTTC 4 cut(s) 466, 1119, 1248, 2214
Eam1105I GACNNNNNGTC 1 cut(s) 703
EarI CTCTTC 4 cut(s) 466, 1119, 1248, 2214
Eco130I CCWWGG 3 cut(s) 1627, 2141, 2247
Eco24I GRGCYC 1 cut(s) 766
Eco47I GGWCC 2 cut(s) 33, 2243
Eco57I CTGAAG 2 cut(s) 1353, 1908
Eco88I CYCGRG 1 cut(s) 2234
Eco91I GGTNACC 1 cut(s) 962
EcoNI CCTNNNNNAGG 1 cut(s) 279
EcoO109I RGGNCCY 1 cut(s) 763
EcoO65I GGTNACC 1 cut(s) 962
EcoRII CCWGG 7 cut(s) 35, 669, 765, 792, 1350, 1416, 1576
EcoT14I CCWWGG 3 cut(s) 1627, 2141, 2247
EcoT22I ATGCAT 2 cut(s) 1861, 2395
EcoT38I GRGCYC 1 cut(s) 766
ErhI CCWWGG 3 cut(s) 1627, 2141, 2247
FalI AAGNNNNNCTT 6 cut(s) 463, 495, 1620, 1652, 1998, 2030
FaqI GGGAC 4 cut(s) 299, 449, 467, 2229
FauI CCCGC 2 cut(s) 518, 541
FauNDI CATATG 2 cut(s) 1951, 2530
Fnu4HI GCNGC 5 cut(s) 250, 546, 987, 1839, 1904
FokI GGATG 3 cut(s) 641, 764, 815
FriOI GRGCYC 1 cut(s) 766
Fsp4HI GCNGC 5 cut(s) 250, 546, 987, 1839, 1904
FspBI CTAG 7 cut(s) 348, 363, 897, 1317, 1485, 1715, 2142
GlaI GCGC 1 cut(s) 253
GluI GCNGC 5 cut(s) 250, 546, 987, 1839, 1904
GsaI CCCAGC 2 cut(s) 229, 1619
GsuI CTGGAG 3 cut(s) 76, 1065, 1716
HaeII RGCGCY 1 cut(s) 255
HaeIII GGCC 6 cut(s) 648, 745, 764, 771, 1725, 2272
HapII CCGG 2 cut(s) 1208, 2444
HhaI GCGC 1 cut(s) 254
Hin6I GCGC 1 cut(s) 252
HinP1I GCGC 1 cut(s) 252
HincII GTYRAC 1 cut(s) 2422
HindII GTYRAC 1 cut(s) 2422
HindIII AAGCTT 1 cut(s) 1534
HpaII CCGG 2 cut(s) 1208, 2444
HphI GGTGA 3 cut(s) 371, 533, 974
Hpy166II GTNNAC 3 cut(s) 506, 1271, 2422
Hpy8I GTNNAC 3 cut(s) 506, 1271, 2422
HpyCH4III ACNGT 7 cut(s) 458, 653, 826, 1017, 1268, 1800, 2483
HpyCH4IV ACGT 2 cut(s) 1232, 2311
HpyF10VI GCNNNNNNNGC 3 cut(s) 794, 1828, 1865
HpyF3I CTNAG 4 cut(s) 890, 1041, 1899, 1941
HpySE526I ACGT 2 cut(s) 1232, 2311
HspAI GCGC 1 cut(s) 252
Kpn2I TCCGGA 1 cut(s) 1207
KpnI GGTACC 1 cut(s) 2439
KspI CCGCGG 1 cut(s) 549
Kzo9I GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
LguI GCTCTTC 2 cut(s) 1119, 1248
LmnI GCTCC 2 cut(s) 57, 1873
Lsp1109I GCAGC 4 cut(s) 261, 998, 1825, 1915
LweI GCATC 6 cut(s) 155, 368, 466, 775, 1352, 2380
MaeI CTAG 7 cut(s) 348, 363, 897, 1317, 1485, 1715, 2142
MaeII ACGT 2 cut(s) 1232, 2311
MalI GATC 7 cut(s) 72, 121, 1399, 1761, 1894, 1956, 2349
MboI GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
MfeI CAATTG 1 cut(s) 1470
MflI RGATCY 4 cut(s) 1397, 1759, 1892, 2347
MhlI GDGCHC 2 cut(s) 766, 1273
MlyI GAGTC 4 cut(s) 73, 733, 823, 848
MmeI TCCRAC 2 cut(s) 539, 1260
Mph1103I ATGCAT 2 cut(s) 1861, 2395
MroI TCCGGA 1 cut(s) 1207
MroXI GAANNNNTTC 1 cut(s) 310
MslI CAYNNNNRTG 3 cut(s) 243, 1015, 1362
MspA1I CMGCKG 1 cut(s) 548
MspCI CTTAAG 1 cut(s) 1979
MspI CCGG 2 cut(s) 1208, 2444
MspR9I CCNGG 8 cut(s) 37, 671, 767, 794, 1352, 1418, 1578, 2445
MunI CAATTG 1 cut(s) 1470
Mva1269I GAATGC 2 cut(s) 1471, 1870
MvaI CCWGG 7 cut(s) 37, 671, 767, 794, 1352, 1418, 1578
MvnI CGCG 1 cut(s) 548
MwoI GCNNNNNNNGC 3 cut(s) 794, 1828, 1865
NciI CCSGG 1 cut(s) 2445
NdeI CATATG 2 cut(s) 1951, 2530
NdeII GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
NheI GCTAGC 1 cut(s) 1316
NlaIV GGNNCC 3 cut(s) 764, 2245, 2437
NmuCI GTSAC 8 cut(s) 597, 621, 826, 962, 1133, 1262, 1524, 2428
NsiI ATGCAT 2 cut(s) 1861, 2395
NspI RCATGY 1 cut(s) 605
OliI CACNNNNGTG 1 cut(s) 1015
PagI TCATGA 1 cut(s) 979
PasI CCCWGGG 1 cut(s) 766
PciSI GCTCTTC 2 cut(s) 1119, 1248
PctI GAATGC 2 cut(s) 1471, 1870
PdmI GAANNNNTTC 1 cut(s) 310
PfeI GAWTC 6 cut(s) 89, 710, 1283, 1700, 2119, 2164
PflMI CCANNNNNTGG 3 cut(s) 74, 752, 1457
PkrI GCNGC 5 cut(s) 251, 547, 988, 1840, 1905
PleI GAGTC 4 cut(s) 72, 732, 823, 847
PpsI GAGTC 4 cut(s) 72, 732, 823, 847
Ppu21I YACGTR 1 cut(s) 2312
PshBI ATTAAT 1 cut(s) 336
Psp6I CCWGG 7 cut(s) 35, 669, 765, 792, 1350, 1416, 1576
PspEI GGTNACC 1 cut(s) 962
PspFI CCCAGC 2 cut(s) 225, 1615
PspGI CCWGG 7 cut(s) 35, 669, 765, 792, 1350, 1416, 1576
PspN4I GGNNCC 3 cut(s) 764, 2245, 2437
PspOMI GGGCCC 1 cut(s) 762
PspPI GGNCC 7 cut(s) 33, 646, 762, 763, 769, 2243, 2270
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 4 cut(s) 1397, 1759, 1892, 2347
RsaI GTAC 3 cut(s) 1356, 2437, 2523
RsaNI GTAC 3 cut(s) 1355, 2436, 2522
RseI CAYNNNNRTG 3 cut(s) 243, 1015, 1362
SacII CCGCGG 1 cut(s) 549
SapI GCTCTTC 2 cut(s) 1119, 1248
SatI GCNGC 5 cut(s) 250, 546, 987, 1839, 1904
Sau3AI GATC 7 cut(s) 70, 119, 1397, 1759, 1892, 1954, 2347
Sau96I GGNCC 7 cut(s) 33, 646, 762, 763, 769, 2243, 2270
SchI GAGTC 4 cut(s) 73, 733, 823, 848
ScrFI CCNGG 8 cut(s) 37, 671, 767, 794, 1352, 1418, 1578, 2445
SduI GDGCHC 2 cut(s) 766, 1273
SfaNI GCATC 6 cut(s) 155, 368, 466, 775, 1352, 2380
SfcI CTRYAG 3 cut(s) 79, 483, 1409
Sfr303I CCGCGG 1 cut(s) 549
SgrBI CCGCGG 1 cut(s) 549
SinI GGWCC 2 cut(s) 33, 2243
SmiI ATTTAAAT 1 cut(s) 2320
SmiMI CAYNNNNRTG 3 cut(s) 243, 1015, 1362
SmlI CTYRAG 3 cut(s) 135, 1979, 2291
SmoI CTYRAG 3 cut(s) 135, 1979, 2291
SpeI ACTAGT 1 cut(s) 1714
SsiI CCGC 4 cut(s) 511, 546, 548, 2333
SspI AATATT 5 cut(s) 263, 874, 1114, 1243, 2455
SspMI CTAG 7 cut(s) 348, 363, 897, 1317, 1485, 1715, 2142
StyD4I CCNGG 8 cut(s) 35, 669, 765, 792, 1350, 1416, 1576, 2443
StyI CCWWGG 3 cut(s) 1627, 2141, 2247
SwaI ATTTAAAT 1 cut(s) 2320
TaaI ACNGT 7 cut(s) 458, 653, 826, 1017, 1268, 1800, 2483
TaiI ACGT 2 cut(s) 1235, 2314
TaqI TCGA 3 cut(s) 685, 1160, 1336
TatI WGTACW 1 cut(s) 2521
TauI GCSGC 1 cut(s) 548
TfiI GAWTC 6 cut(s) 89, 710, 1283, 1700, 2119, 2164
TscAI CASTG 4 cut(s) 463, 1273, 1501, 1740
TseFI GTSAC 8 cut(s) 597, 621, 826, 962, 1133, 1262, 1524, 2428
TseI GCWGC 4 cut(s) 249, 986, 1838, 1903
Tsp45I GTSAC 8 cut(s) 597, 621, 826, 962, 1133, 1262, 1524, 2428
TspDTI ATGAA 5 cut(s) 322, 926, 996, 1598, 2199
TspGWI ACGGA 2 cut(s) 693, 882
TspRI CASTG 4 cut(s) 463, 1273, 1501, 1740
Van91I CCANNNNNTGG 3 cut(s) 74, 752, 1457
Vha464I CTTAAG 1 cut(s) 1979
VneI GTGCAC 1 cut(s) 1269
VpaK11BI GGWCC 2 cut(s) 33, 2243
VspI ATTAAT 1 cut(s) 336
XagI CCTNNNNNAGG 1 cut(s) 279
XapI RAATTY 5 cut(s) 536, 1155, 1846, 2054, 2321
XceI RCATGY 1 cut(s) 605
XcmI CCANNNNNNNNNTGG 3 cut(s) 677, 800, 1358
XmaJI CCTAGG 1 cut(s) 2141
XmnI GAANNNNTTC 1 cut(s) 310
XspI CTAG 7 cut(s) 348, 363, 897, 1317, 1485, 1715, 2142
Zsp2I ATGCAT 2 cut(s) 1861, 2395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.