Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003759

Physical Location & Seq

Genomic Coordinates Reverse (-)

7086520 .. 7094776

Gene Structure 8257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGAAGTCACTTTCTGCGTTGGGAGATGTGTTGTCTTCTTTGACTTCAAAAAAGGATGCTATACCTTATGAAAATTCAATGCTTACCAAAGTACTTGCAGACTCACTAGGTGGAAGTTCAAAAACTCTGATGATTGTTAACGTCGTTCCAAATGCTTCGAATTTGTCGGAGACATTATCATCTCTCAATTTCTCTTCTAGAGCTCGAAATGCTGTTCTAAGCCTTGGGAATCGAGATACGATAAAGAAATGGAGAGATATTGCAAATGATGCACGTAAGGAGTTATATGAAAAGGAAAAAGAAAGTCAAGATCTGAAACAAGAGGTTTTAGGACTTAAACAAGCACTCAAGGATTCAAATGATCAGTGTGTTCTGCTCTTCAATGAAGTGCAGAAGGCATGGAAAGTATCGGATATGTTACAGTCAGATTTAAAGGCAGAGAATATGATGCTTGCAGATAAGCAGAAGATAGAAAAGGAGCAAAATGCACAGCTTAGAAATCAAGTAGCTCAGCTGTTACAGTTGGAGCAAGACCAGAGAGTGCAGCTTGAACAACGAGATTCTACAATTCAGGCCTTGCAGGCCAAAATTAAAAGCATCGAGTCCAAACTCAGTGAAACCCTCCATTCCACTGAAGATCGGTCATCATTAGTCTCTGATCCAGGGTCTGGAATTCTATCAAATTCCAAGGCAATGGGGGACGGCATGGATTCTCCTCCAGTAACTAAGAAATTGGAAGAAGAGCTTAAAAAACGTGACGCATTAATAGAGAGGTTGCATGAAGAAAATGAAAAGTTATTTGATAGATTGACAGAGAAAACATCTTTGGCTGGCTCACCAAAGTTGTCAAGTCCATCATCCAAAGGGCCACTAAATTTTCAGTCTCGGGACCTTGTGAGGAATGATAGTAGAGGACACTCGATGGATGTTGTTCCTTCATCACTGGCAGCTGCTGCAGATAGGACCGAGGGTACTGTTGCTTTGGTGAAAACAGGTGTGGAGAAAGTCAAAACAACGCCGGCAGGAGAATATCTTACATCTGCCTTGAATGACTTTGATCCTGAACAGCATGACAGCCTTGCTGCCATTTCGGATGGAGCAAATAAGCTTTTGATGCTGGTTCTGGCTGCAGTAATTAAAGCAGGGGCTTCTAGGGAGCATGAAATACTTGCTGAAATAAGAGATGCTGTTTTCTCTTTTATTCGTAAAATGGAACCACAGAGGGTAATGGACACCATGCTTGTATCCCGTGTTAGAATTTTGTATATTAGATCGTTCCATGCTAGATCACCAGAGCTGCAGTCCATCAAGGTTTCTCCGGTTGAAAGTTTTCTAGAGAAGGTTAATACTGGACGTAGTAGAAGTTCCAGCCGGGGTAACAGCCCTGGAAGATCTCCTGTGCGCTATGTTGATGAGCATATCCAAGGCTTCAAAGTGAACCTTAAGCCAGAAAAGAAGTCAAAGTTTTCATCAGTTGTATCAAAGATACGAGGACTTGATCAGGATACTCCAAGGCAGCAGGTAACTGCTGGAAAGCTTAAGGAAATAAATGAAGAAGCAAAAAGTTTTGCAGTTGCAAACAAAGCTCTTGCAGCTCTGTTTGTGCATACACCAGCTGGTGAGCTCCAGCGCCAACTTAGATCCTGGCTTGCAGAAAATTTTGACTTTCTCTCTGTTACTGGAGAGGATGCATCAGGAGGGACAACTGGTCAGTTGGAGCTCCTTTCAACTGCAATCATGGATGGTTGGATGGCTGGACTTGGTGCTGCAGTGCCTCCTAATACAGATGCTCTTGGCCAACTTCTATCTGAGTATTCGAAGCGGGTCTACAGTTCTCAATTGCAGCACTTGAAGGATATTGCTGGTACATTGGCATCAGAAGGGGCAGAAGATACTGCACAGGTTGCAAAACTGCGATCAGCTCTCGAGTCTGTTGATCACAAAAGGAGAAAGATTTTACAACAAATAAGAAGTGATGTAGCCTTGTTGACATTGGAAGATGGTGGTCCACCTATTCAAAATCCTTCCACTGCTGGTGAAGATGCACGATTAGCATCTCTCATTTCCCTCGATGGCATATTGAAACAAGTCAAGGATTTAATAGGACAATCGTCTGTAAGCACCTTAAGCAAGAACAAAAAGAAACTAATGCTTGCATCTCTAGACGAACTTGCTGAACGGATGCCTTCTCTTCTGGACATTGATCATCCTTGTGCACAAAGACAAATTGCTGATGCTCGTCATCTAATCCAGTCTATTCCTGAAGAAGATGATCTTCAAGAGCAATCTCATGCTCGCAAACCATCTACAGATTTCGTGGGGGTTAATACTGAAACCGATGTGGCGCAGTGGAATGTCCTGCAGTTCAATACAGGCTCCACGACCCCATTTATCATCAAGTGTGGAGCAAACTCAAGTTCAGAACTGGTCATTAAAGCAGATGCCAAGATTCAAGAACCTAAAGGTGGTGAGGTTGTCAGGGTCGTCCCAAGACCATCTGTTCTGGAAAGTATGAGCTTGGAGGAGATGAAACATGTATTCTCCCAACTCCCTGAGGCTCTAAGCTTGCTTGCCTTGGCAAGGACTGCCGATGGAACACGAGCTCGGTATTCTAGGCTGTACAGGACTTTAGCCATGAAAGTTCCGTCTCTGAGGGATTTAGTCGGCGAACTTGAAAAGGGGGGAGTCCTAAAAGACGTGAGGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000913 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005875 GO:0005886 GO:0006810 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007049 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009941 GO:0009987 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019750 GO:0022402 GO:0022607 GO:0030029 GO:0030048 GO:0030705 GO:0031022 GO:0031967 GO:0031975 GO:0032506 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0051179 GO:0051234 GO:0051301 GO:0051640 GO:0051641 GO:0051644 GO:0051647 GO:0051649 GO:0051656 GO:0051667 GO:0061640 GO:0071840 GO:0071944 GO:0099515 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

903

Amino Acids

98.91

Weight (kDa)

6.97

Isoelectric Point (pI)

47.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kinesin	PF00225	2 - 70	1.2e-22	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10470 AT5G10470 AT5G65460 AT5G65460 AT5G65460 AT5G65460 AT5G65460 AT5G65460
fragaria_vesca	FvH4_1g19720 FvH4_1g19720
malus_domestica	MD00G1019700.v1.1 MD15G1313400.v1.1 MD15G1313600.v1.1
prunus_persica	Prupe.6G198800_v2.0.a1 Prupe.6G198800_v2.0.a1
pyrus_communis	pycom01g06640 pycom15g27690
rosa_chinensis	RchiOBHm_Chr2g0111301
rosa_laevigata	RLG00000007010 RLG00000017883
rosa_multiflora	Rmu_co8453119.1_g000001 Rmu_sc0001363.1_g000009 Rmu_sc0001363.1_g000010 Rmu_sc0036570.1_g000001 Rmu_sc0036571.1_g000001
rosa_roxburghii	Rroxscaffold_2G00132520
rosa_rugosa	Rorug02G0172700
rosa_samantha	Rh2AG225700 Rh2BG237400 Rh2CG228700 Rh2DG233200 Rh4DG010800 Rh5BG175600
rosa_wichuraiana	Rw2G017420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1510
AccB7I	CCANNNNNTGG	1 cut(s)	668
AccI	GTMKAC	1 cut(s)	1827
AciI	CCGC	1 cut(s)	1822
AclWI	GGATC	3 cut(s)	653, 1052, 1635
AcoI	YGGCCR	1 cut(s)	1795
AcsI	RAATTY	7 cut(s)	73, 160, 672, 682, 874, 1257, 1657
AcuI	CTGAAG	2 cut(s)	654, 2283
AdeI	CACNNNGTG	1 cut(s)	110
AfaI	GTAC	4 cut(s)	93, 973, 1867, 2621
AfiI	CCNNNNNNNGG	3 cut(s)	668, 2465, 2580
AflII	CTTAAG	3 cut(s)	1442, 1538, 2125
AflIII	ACRYGT	1 cut(s)	2533
AhdI	GACNNNNNGTC	2 cut(s)	1707, 2701
AjiI	CACGTC	1 cut(s)	2698
AjnI	CCWGG	3 cut(s)	661, 1384, 1643
AjuI	GAANNNNNNNTTGG	2 cut(s)	809, 841
Alw21I	GWGCWC	5 cut(s)	205, 1626, 1722, 2218, 2605
Alw26I	GTCTC	4 cut(s)	164, 658, 888, 2652
Alw44I	GTGCAC	1 cut(s)	2214
AlwI	GGATC	3 cut(s)	653, 1052, 1635
AlwNI	CAGNNNCTG	2 cut(s)	668, 953
Ama87I	CYCGRG	2 cut(s)	885, 1925
AoxI	GGCC	4 cut(s)	573, 582, 866, 1795
ApaLI	GTGCAC	1 cut(s)	2214
ApoI	RAATTY	7 cut(s)	73, 160, 672, 682, 874, 1257, 1657
AseI	ATTAAT	1 cut(s)	764
Asp700I	GAANNNNTTC	1 cut(s)	1329
AspLEI	GCGC	3 cut(s)	1404, 1632, 2347
AspS9I	GGNCC	4 cut(s)	866, 889, 963, 2006
AsuC2I	CCSGG	1 cut(s)	1373
AsuHPI	GGTGA	6 cut(s)	828, 997, 1281, 1631, 2048, 2480
AsuII	TTCGAA	2 cut(s)	158, 1817
AvaI	CYCGRG	2 cut(s)	885, 1925
AvaII	GGWCC	3 cut(s)	889, 963, 2006
AxyI	CCTNAGG	1 cut(s)	2553
BaeGI	GKGCMC	1 cut(s)	2218
BalI	TGGCCA	1 cut(s)	1797
BanII	GRGCYC	4 cut(s)	205, 1626, 1722, 2605
BarI	GAAGNNNNNNTAC	2 cut(s)	1811, 1843
BauI	CACGAG	1 cut(s)	2598
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	5 cut(s)	205, 1626, 1722, 2218, 2605
BceAI	ACGGC	1 cut(s)	718
BciT130I	CCWGG	3 cut(s)	663, 1386, 1645
BciVI	GTATCC	2 cut(s)	1255, 1498
BclI	TGATCA	4 cut(s)	361, 1498, 1936, 2203
BcnI	CCSGG	1 cut(s)	1373
BcoDI	GTCTC	4 cut(s)	164, 658, 888, 2652
BfaI	CTAG	7 cut(s)	107, 198, 1152, 1284, 1334, 2162, 2613
BfmI	CTRYAG	7 cut(s)	954, 1128, 1298, 1767, 1828, 2307, 2360
BfoI	RGCGCY	1 cut(s)	1633
BfrI	CTTAAG	3 cut(s)	1442, 1538, 2125
BfuAI	ACCTGC	1 cut(s)	1510
BfuI	GTATCC	2 cut(s)	1255, 1498
BglI	GCCNNNNNGGC	1 cut(s)	581
BglII	AGATCT	2 cut(s)	310, 1391
BlpI	GCTNAGC	1 cut(s)	510
BmcAI	AGTACT	1 cut(s)	93
Bme1390I	CCNGG	4 cut(s)	663, 1373, 1386, 1645
Bme18I	GGWCC	3 cut(s)	889, 963, 2006
BmeRI	GACNNNNNGTC	2 cut(s)	1707, 2701
BmeT110I	CYCGRG	2 cut(s)	885, 1925
BmgBI	CACGTC	1 cut(s)	2698
BmgT120I	GGNCC	4 cut(s)	866, 889, 963, 2006
BmiI	GGNNCC	3 cut(s)	890, 1215, 2377
BmrFI	CCNGG	4 cut(s)	663, 1373, 1386, 1645
BoxI	GACNNNNGTC	1 cut(s)	2110
BpiI	GAAGAC	1 cut(s)	27
BpmI	CTGGAG	3 cut(s)	702, 1610, 1701
Bpu1102I	GCTNAGC	1 cut(s)	510
Bpu14I	TTCGAA	2 cut(s)	158, 1817
BpuEI	CTTGAG	2 cut(s)	332, 2398
BpuMI	CCSGG	1 cut(s)	1373
BsaAI	YACGTR	1 cut(s)	275
BsaBI	GATNNNNATC	1 cut(s)	2053
BsaJI	CCNNGG	9 cut(s)	223, 662, 687, 966, 1372, 1384, 1423, 1511, 2574
BsaWI	WCCGGW	1 cut(s)	1318
Bsc4I	CCNNNNNNNGG	3 cut(s)	668, 2465, 2580
Bse118I	RCCGGY	1 cut(s)	1018
Bse1I	ACTGG	7 cut(s)	719, 948, 1354, 1684, 1711, 2251, 2430
Bse21I	CCTNAGG	1 cut(s)	2553
Bse3DI	GCAATG	1 cut(s)	699
Bse8I	GATNNNNATC	1 cut(s)	2053
BseBI	CCWGG	3 cut(s)	663, 1386, 1645
BseDI	CCNNGG	9 cut(s)	223, 662, 687, 966, 1372, 1384, 1423, 1511, 2574
BseGI	GGATG	9 cut(s)	61, 857, 931, 1099, 1693, 1747, 1755, 2187, 2206
BseJI	GATNNNNATC	1 cut(s)	2053
BseLI	CCNNNNNNNGG	3 cut(s)	668, 2465, 2580
BseMI	GCAATG	1 cut(s)	699
BseMII	CTCAG	5 cut(s)	524, 625, 1800, 2544, 2642
BseNI	ACTGG	7 cut(s)	719, 948, 1354, 1684, 1711, 2251, 2430
BseRI	GAGGAG	2 cut(s)	705, 2537
BseSI	GKGCMC	1 cut(s)	2218
BsgI	GTGCAG	3 cut(s)	410, 563, 1881
BshFI	GGCC	4 cut(s)	575, 584, 868, 1797
BsiHKAI	GWGCWC	5 cut(s)	205, 1626, 1722, 2218, 2605
BsiHKCI	CYCGRG	2 cut(s)	885, 1925
BsiSI	CCGG	3 cut(s)	1019, 1319, 1372
BslFI	GGGAC	4 cut(s)	713, 902, 1714, 2471
BslI	CCNNNNNNNGG	3 cut(s)	668, 2465, 2580
BsmAI	GTCTC	4 cut(s)	164, 658, 888, 2652
BsmBI	CGTCTC	1 cut(s)	2652
BsmFI	GGGAC	4 cut(s)	713, 902, 1714, 2471
BsnI	GGCC	4 cut(s)	575, 584, 868, 1797
BsoBI	CYCGRG	2 cut(s)	885, 1925
Bsp119I	TTCGAA	2 cut(s)	158, 1817
Bsp1286I	GDGCHC	5 cut(s)	205, 1626, 1722, 2218, 2605
Bsp1407I	TGTACA	1 cut(s)	2619
Bsp1720I	GCTNAGC	1 cut(s)	510
BspACI	CCGC	1 cut(s)	1822
BspANI	GGCC	4 cut(s)	575, 584, 868, 1797
BspCNI	CTCAG	5 cut(s)	523, 624, 1801, 2545, 2643
BspHI	TCATGA	1 cut(s)	2705
BspLI	GGNNCC	3 cut(s)	890, 1215, 2377
BspMAI	CTGCAG	5 cut(s)	958, 1132, 1302, 1771, 2364
BspMI	ACCTGC	1 cut(s)	1510
BspPI	GGATC	3 cut(s)	653, 1052, 1635
BspQI	GCTCTTC	2 cut(s)	383, 735
BspT104I	TTCGAA	2 cut(s)	158, 1817
BspTI	CTTAAG	3 cut(s)	1442, 1538, 2125
BsrDI	GCAATG	1 cut(s)	699
BsrFI	RCCGGY	1 cut(s)	1018
BsrGI	TGTACA	1 cut(s)	2619
BsrI	ACTGG	7 cut(s)	719, 948, 1354, 1684, 1711, 2251, 2430
BssAI	RCCGGY	1 cut(s)	1018
BssECI	CCNNGG	9 cut(s)	223, 662, 687, 966, 1372, 1384, 1423, 1511, 2574
BssSI	CACGAG	1 cut(s)	2598
BssT1I	CCWWGG	5 cut(s)	223, 687, 1423, 1511, 2574
Bst2BI	CACGAG	1 cut(s)	2598
Bst2UI	CCWGG	3 cut(s)	663, 1386, 1645
Bst4CI	ACNGT	4 cut(s)	423, 522, 976, 1832
Bst6I	CTCTTC	4 cut(s)	199, 383, 735, 2196
BstAFI	CTTAAG	3 cut(s)	1442, 1538, 2125
BstAPI	GCANNNNNTGC	4 cut(s)	269, 953, 1904, 2585
BstAUI	TGTACA	1 cut(s)	2619
BstBAI	YACGTR	1 cut(s)	275
BstBI	TTCGAA	2 cut(s)	158, 1817
BstC8I	GCNNGC	9 cut(s)	453, 582, 832, 1020, 1650, 2154, 2296, 2567, 2571
BstENI	CCTNNNNNAGG	1 cut(s)	2578
BstF5I	GGATG	9 cut(s)	61, 857, 931, 1099, 1693, 1747, 1755, 2187, 2206
BstH2I	RGCGCY	1 cut(s)	1633
BstHHI	GCGC	3 cut(s)	1404, 1632, 2347
BstMAI	GTCTC	4 cut(s)	164, 658, 888, 2652
BstNI	CCWGG	3 cut(s)	663, 1386, 1645
BstNSI	RCATGY	1 cut(s)	2537
BstPAI	GACNNNNGTC	1 cut(s)	2110
BstSCI	CCNGG	4 cut(s)	661, 1371, 1384, 1643
BstSFI	CTRYAG	7 cut(s)	954, 1128, 1298, 1767, 1828, 2307, 2360
BstSLI	GKGCMC	1 cut(s)	2218
BstV2I	GAAGAC	1 cut(s)	27
BstX2I	RGATCY	3 cut(s)	310, 1391, 1640
BstXI	CCANNNNNNTGG	1 cut(s)	694
BstYI	RGATCY	3 cut(s)	310, 1391, 1640
Bsu36I	CCTNAGG	1 cut(s)	2553
BsuI	GTATCC	2 cut(s)	1255, 1498
BsuRI	GGCC	4 cut(s)	575, 584, 868, 1797
BtrI	CACGTC	1 cut(s)	2698
BtsCI	GGATG	9 cut(s)	61, 857, 931, 1099, 1693, 1747, 1755, 2187, 2206
BtsI	GCAGTG	3 cut(s)	1776, 2028, 2354
BtsIMutI	CAGTG	7 cut(s)	371, 619, 630, 941, 1776, 2028, 2354
BveI	ACCTGC	1 cut(s)	1510
Cac8I	GCNNGC	9 cut(s)	453, 582, 832, 1020, 1650, 2154, 2296, 2567, 2571
CaiI	CAGNNNCTG	2 cut(s)	668, 953
CciI	TCATGA	1 cut(s)	2705
CfoI	GCGC	3 cut(s)	1404, 1632, 2347
Cfr10I	RCCGGY	1 cut(s)	1018
Cfr13I	GGNCC	4 cut(s)	866, 889, 963, 2006
CseI	GACGC	1 cut(s)	767
Csp6I	GTAC	4 cut(s)	92, 972, 1866, 2620
CviQI	GTAC	4 cut(s)	92, 972, 1866, 2620
DraI	TTTAAA	1 cut(s)	432
DraIII	CACNNNGTG	1 cut(s)	110
DriI	GACNNNNNGTC	2 cut(s)	1707, 2701
EaeI	YGGCCR	1 cut(s)	1795
Eam1104I	CTCTTC	4 cut(s)	199, 383, 735, 2196
Eam1105I	GACNNNNNGTC	2 cut(s)	1707, 2701
EarI	CTCTTC	4 cut(s)	199, 383, 735, 2196
Ecl136II	GAGCTC	4 cut(s)	203, 1624, 1720, 2603
Eco130I	CCWWGG	5 cut(s)	223, 687, 1423, 1511, 2574
Eco147I	AGGCCT	1 cut(s)	575
Eco24I	GRGCYC	4 cut(s)	205, 1626, 1722, 2605
Eco47I	GGWCC	3 cut(s)	889, 963, 2006
Eco53kI	GAGCTC	4 cut(s)	203, 1624, 1720, 2603
Eco57I	CTGAAG	2 cut(s)	654, 2283
Eco81I	CCTNAGG	1 cut(s)	2553
Eco88I	CYCGRG	2 cut(s)	885, 1925
EcoICRI	GAGCTC	4 cut(s)	203, 1624, 1720, 2603
EcoNI	CCTNNNNNAGG	1 cut(s)	2578
EcoO109I	RGGNCCY	1 cut(s)	889
EcoRI	GAATTC	1 cut(s)	672
EcoRII	CCWGG	3 cut(s)	661, 1384, 1643
EcoT14I	CCWWGG	5 cut(s)	223, 687, 1423, 1511, 2574
EcoT22I	ATGCAT	1 cut(s)	1693
EcoT38I	GRGCYC	4 cut(s)	205, 1626, 1722, 2605
ErhI	CCWWGG	5 cut(s)	223, 687, 1423, 1511, 2574
Esp3I	CGTCTC	1 cut(s)	2652
FalI	AAGNNNNNCTT	6 cut(s)	729, 761, 1425, 1457, 2259, 2291
FaqI	GGGAC	4 cut(s)	713, 902, 1714, 2471
FauI	CCCGC	1 cut(s)	1815
FbaI	TGATCA	4 cut(s)	361, 1498, 1936, 2203
FblI	GTMKAC	1 cut(s)	1827
FokI	GGATG	9 cut(s)	68, 844, 938, 1106, 1700, 1754, 1762, 2193, 2194
FriOI	GRGCYC	4 cut(s)	205, 1626, 1722, 2605
FspBI	CTAG	7 cut(s)	107, 198, 1152, 1284, 1334, 2162, 2613
GlaI	GCGC	3 cut(s)	1403, 1631, 2346
GsuI	CTGGAG	3 cut(s)	702, 1610, 1701
HaeII	RGCGCY	1 cut(s)	1633
HaeIII	GGCC	4 cut(s)	575, 584, 868, 1797
HapII	CCGG	3 cut(s)	1019, 1319, 1372
HgaI	GACGC	1 cut(s)	767
HhaI	GCGC	3 cut(s)	1404, 1632, 2347
Hin6I	GCGC	3 cut(s)	1402, 1630, 2345
HinP1I	GCGC	3 cut(s)	1402, 1630, 2345
HincII	GTYRAC	2 cut(s)	139, 1989
HindII	GTYRAC	2 cut(s)	139, 1989
HindIII	AAGCTT	3 cut(s)	1106, 1535, 2563
HinfI	GANTC	9 cut(s)	101, 229, 353, 560, 602, 710, 1928, 2449, 2685
HpaI	GTTAAC	1 cut(s)	139
HpaII	CCGG	3 cut(s)	1019, 1319, 1372
HphI	GGTGA	6 cut(s)	828, 997, 1281, 1631, 2048, 2480
Hpy166II	GTNNAC	6 cut(s)	139, 1438, 1828, 1989, 2009, 2216
Hpy8I	GTNNAC	6 cut(s)	139, 1438, 1828, 1989, 2009, 2216
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	7 cut(s)	388, 945, 1333, 1846, 1874, 2034, 2196
HpyCH4III	ACNGT	4 cut(s)	423, 522, 976, 1832
HpyCH4IV	ACGT	5 cut(s)	141, 274, 754, 1354, 2697
HpySE526I	ACGT	5 cut(s)	141, 274, 754, 1354, 2697
HspAI	GCGC	3 cut(s)	1402, 1630, 2345
KroI	GCCGGC	1 cut(s)	1018
KroNI	GCCGGC	1 cut(s)	1020
Ksp22I	TGATCA	4 cut(s)	361, 1498, 1936, 2203
KspAI	GTTAAC	1 cut(s)	139
LguI	GCTCTTC	2 cut(s)	383, 735
LmnI	GCTCC	9 cut(s)	478, 526, 1097, 1156, 1629, 1717, 1725, 2381, 2405
MaeI	CTAG	7 cut(s)	107, 198, 1152, 1284, 1334, 2162, 2613
MaeII	ACGT	5 cut(s)	141, 274, 754, 1354, 2697
MaeIII	GTNAC	8 cut(s)	6, 417, 516, 721, 755, 1376, 1522, 1675
MfeI	CAATTG	1 cut(s)	1838
MflI	RGATCY	3 cut(s)	310, 1391, 1640
MhlI	GDGCHC	5 cut(s)	205, 1626, 1722, 2218, 2605
MlsI	TGGCCA	1 cut(s)	1797
MluNI	TGGCCA	1 cut(s)	1797
MlyI	GAGTC	4 cut(s)	95, 611, 1937, 2694
MmeI	TCCRAC	4 cut(s)	147, 504, 1695, 1727
Mox20I	TGGCCA	1 cut(s)	1797
Mph1103I	ATGCAT	1 cut(s)	1693
MroNI	GCCGGC	1 cut(s)	1018
MroXI	GAANNNNTTC	1 cut(s)	1329
MscI	TGGCCA	1 cut(s)	1797
MslI	CAYNNNNRTG	1 cut(s)	2211
Msp20I	TGGCCA	1 cut(s)	1797
MspA1I	CMGCKG	3 cut(s)	514, 950, 1616
MspCI	CTTAAG	3 cut(s)	1442, 1538, 2125
MspI	CCGG	3 cut(s)	1019, 1319, 1372
MspR9I	CCNGG	4 cut(s)	663, 1373, 1386, 1645
MunI	CAATTG	1 cut(s)	1838
MvaI	CCWGG	3 cut(s)	663, 1386, 1645
NaeI	GCCGGC	1 cut(s)	1020
NciI	CCSGG	1 cut(s)	1373
NgoMIV	GCCGGC	1 cut(s)	1018
NlaIV	GGNNCC	3 cut(s)	890, 1215, 2377
NmuCI	GTSAC	2 cut(s)	6, 755
NsiI	ATGCAT	1 cut(s)	1693
NspI	RCATGY	1 cut(s)	2537
NspV	TTCGAA	2 cut(s)	158, 1817
PaeR7I	CTCGAG	1 cut(s)	1925
PagI	TCATGA	1 cut(s)	2705
PceI	AGGCCT	1 cut(s)	575
PciI	ACATGT	1 cut(s)	2533
PciSI	GCTCTTC	2 cut(s)	383, 735
PdiI	GCCGGC	1 cut(s)	1020
PdmI	GAANNNNTTC	1 cut(s)	1329
PfeI	GAWTC	5 cut(s)	229, 353, 560, 710, 2449
PflMI	CCANNNNNTGG	1 cut(s)	668
PleI	GAGTC	4 cut(s)	95, 610, 1936, 2693
PpsI	GAGTC	4 cut(s)	95, 610, 1936, 2693
Ppu21I	YACGTR	1 cut(s)	275
PpuMI	RGGWCCY	1 cut(s)	889
PscI	ACATGT	1 cut(s)	2533
PshAI	GACNNNNGTC	1 cut(s)	2110
PshBI	ATTAAT	1 cut(s)	764
Psp124BI	GAGCTC	4 cut(s)	205, 1626, 1722, 2605
Psp5II	RGGWCCY	1 cut(s)	889
Psp6I	CCWGG	3 cut(s)	661, 1384, 1643
PspGI	CCWGG	3 cut(s)	661, 1384, 1643
PspN4I	GGNNCC	3 cut(s)	890, 1215, 2377
PspPI	GGNCC	4 cut(s)	866, 889, 963, 2006
PspPPI	RGGWCCY	1 cut(s)	889
PsrI	GAACNNNNNNTAC	2 cut(s)	1348, 1380
PstI	CTGCAG	5 cut(s)	958, 1132, 1302, 1771, 2364
PstNI	CAGNNNCTG	2 cut(s)	668, 953
PsuI	RGATCY	3 cut(s)	310, 1391, 1640
PvuII	CAGCTG	3 cut(s)	514, 950, 1616
RsaI	GTAC	4 cut(s)	93, 973, 1867, 2621
RsaNI	GTAC	4 cut(s)	92, 972, 1866, 2620
RseI	CAYNNNNRTG	1 cut(s)	2211
SacI	GAGCTC	4 cut(s)	205, 1626, 1722, 2605
SapI	GCTCTTC	2 cut(s)	383, 735
Sau96I	GGNCC	4 cut(s)	866, 889, 963, 2006
ScaI	AGTACT	1 cut(s)	93
SchI	GAGTC	4 cut(s)	95, 611, 1937, 2694
ScrFI	CCNGG	4 cut(s)	663, 1373, 1386, 1645
SduI	GDGCHC	5 cut(s)	205, 1626, 1722, 2218, 2605
SfcI	CTRYAG	7 cut(s)	954, 1128, 1298, 1767, 1828, 2307, 2360
SfiI	GGCCNNNNNGGCC	1 cut(s)	581
Sfr274I	CTCGAG	1 cut(s)	1925
SfuI	TTCGAA	2 cut(s)	158, 1817
SinI	GGWCC	3 cut(s)	889, 963, 2006
SlaI	CTCGAG	1 cut(s)	1925
SmiMI	CAYNNNNRTG	1 cut(s)	2211
SmlI	CTYRAG	6 cut(s)	347, 1442, 1538, 1925, 2125, 2413
SmoI	CTYRAG	6 cut(s)	347, 1442, 1538, 1925, 2125, 2413
SseBI	AGGCCT	1 cut(s)	575
SsiI	CCGC	1 cut(s)	1822
SspMI	CTAG	7 cut(s)	107, 198, 1152, 1284, 1334, 2162, 2613
SstI	GAGCTC	4 cut(s)	205, 1626, 1722, 2605
StuI	AGGCCT	1 cut(s)	575
StyD4I	CCNGG	4 cut(s)	661, 1371, 1384, 1643
StyI	CCWWGG	5 cut(s)	223, 687, 1423, 1511, 2574
TaaI	ACNGT	4 cut(s)	423, 522, 976, 1832
TaiI	ACGT	5 cut(s)	144, 277, 757, 1357, 2700
TaqI	TCGA	8 cut(s)	158, 205, 232, 600, 920, 1817, 1926, 2070
TaqII	GACCGA	2 cut(s)	630, 980
TatI	WGTACW	2 cut(s)	91, 2619
TfiI	GAWTC	5 cut(s)	229, 353, 560, 710, 2449
TscAI	CASTG	7 cut(s)	371, 619, 637, 948, 1776, 2035, 2354
TseFI	GTSAC	2 cut(s)	6, 755
Tsp45I	GTSAC	2 cut(s)	6, 755
TspGWI	ACGGA	2 cut(s)	2194, 2634
TspRI	CASTG	7 cut(s)	371, 619, 637, 948, 1776, 2035, 2354
Van91I	CCANNNNNTGG	1 cut(s)	668
Vha464I	CTTAAG	3 cut(s)	1442, 1538, 2125
VneI	GTGCAC	1 cut(s)	2214
VpaK11BI	GGWCC	3 cut(s)	889, 963, 2006
VspI	ATTAAT	1 cut(s)	764
XagI	CCTNNNNNAGG	1 cut(s)	2578
XapI	RAATTY	7 cut(s)	73, 160, 672, 682, 874, 1257, 1657
XbaI	TCTAGA	3 cut(s)	197, 1333, 2161
XceI	RCATGY	1 cut(s)	2537
XhoI	CTCGAG	1 cut(s)	1925
XmiI	GTMKAC	1 cut(s)	1827
XmnI	GAANNNNTTC	1 cut(s)	1329
XspI	CTAG	7 cut(s)	107, 198, 1152, 1284, 1334, 2162, 2613
ZrmI	AGTACT	1 cut(s)	93
Zsp2I	ATGCAT	1 cut(s)	1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.