Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0004096

Physical Location & Seq

Genomic Coordinates Reverse (-)

19100158 .. 19104926

Gene Structure 4769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2580 bp

ATGGTGCCTTCTCGGGTGGCTGGAGGATTAGCTCAGTCTTCACCAAGTTCTGGAATTTTCTTCCAAGGGGATGGGCAGTCTCAGCTTGTAGTTAACTCACACTTGAGTTCATCTTTCGGGAACTCTTCTAATTCCATTCCCGGAACTGGGCGTTCAAATCTCGGTCCGGTTTCTGGGGACATGAATAATGCAGTTTTGAGCGGTGTGGCGAATTCAGGTCTAAGTGTTGGGGCAAGTTCTTTGGTCACAGATGCAAACTCTGTACTTTCTGGAGGTCCCCATTTGCAAAGAAGTGCAAGCATCAATAACGAGTCATACATGCGCTTACCAGCATCACCCATGTCCTTCTCTTCCAACAATATTAGCATGTCAGGGTCATCGATTGTGGATGGGTCTTCCGTAGTGCAACAGAGTTCTCAGCATGACCAGAATTCTCAACAAATTCAGCAGAATCAGCAACACCAGAACCAACGGCAGCAAGGGCCTTCTAGTGCTACTTCCTTACCAACATCCCAAACTGGTCAGGTTTCCCTTCCCATGGGAGCGCGAGTACCTGGAACCTTTATTCAGGATCCAAACAATTTGGCCCATGTCGAGAAAAAACCCCGTCTGGATATCAAGCAGGAAGATATTCTACAGCAACAGGTGATACAACAGTTACTGCAAAGACAGGATCCAATGCAACTCCAAGGTCGAAGTCCCCAGTTACAAGCCATGCTTCAGCAGCAGAGATTACGGCAACAGCAACAGATTTTGCAGTCAATGCCTCAACTGCAGAGGGCCCAGTTGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAGTTGAGACAACAGCAATTTCAACAACAAGCAATGCAGCCAGTATCTTCCATTAAGCGCCCCTATGATGGTGGCGTATGTGCTCGTAGGCTGATGCAATATCTATACCACCAGCGGCAACGTCCTGCTGACAATAGTATTGCTTATTGGAGGAAGTTTGTTACAGAGTATTACTCTCCTCGTGCAAAGAAAAGATGGTGCTTGTCATTATATGATAATGTTGGGCATCACGCACTCGGTGTTTTCCCTCAGGCTGCTATGGACGCGTGGCAATGTGACATTTGTGGTTCTAAATCTGGAAGGGGTTTTGAGGCGACATTTGAAGTGCTTCCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTCATCGATGAGCTTTTGTTCTTGGACTTGCCACGTGAACGTAGATTTCCTTCTGGTGTCATGATGTTGGAGTATGGGAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGGGAGGGTCAGCTTCGTATTATATTTACGCAAGATTTAAAGATATTGTCTTGGGAATTCTGTGCAAGAAGACATGAAGAACTTCTTCCTCGTAGGTTGGTTGCTCCGCAGGTGAATCAGTTGGTTCAAGTTGCTCAGAAATGTCAAAGCACAATAGCTGAAAGTGGATCTGACGGGATCTCTCAGCAGGATCTACAAACAAACAGCAATATGGTACTGACAGCTGGACGACAGCTTGCAAAGAGTTTGGAGTTGCAGTCGTTAAATGACTTAGGTTTTTCCAAAAGATATGTGAGGTGTTTGCAGATCTCAGAGGTTGTCAATAGCATGAAGGACTTGGTTGACTTCTGCAGGGAGAACAAAGTTGGGCCAATTGAGGGCTTGAAGGTTTATCCTCGGCATGCCACTGCGGCCAAGCTCCAGATGCAAAAGATGCAGGAAATGGAGCAGTTAGCAAGTGCTCAGGGTTTGCCCACCGACAGGAACACACTCAATAAGATAATGGCATTGCATCCTGGACTGAATAACCAAATGAACAACCACCAGATGGCTGGTCGTGGAGCTATGAGCGGTTCAGCACAAGCTGCTCTGGCACTAAATTACCAGAATCTGCTCTTGAGGCAGAACTCAATGAATTCAAATGCGAACTCTCTTCAACAGGAGGCATCTTCTTCCTTCAATAATTCCAATCACAGCCCATCTTCAACATTCCAAGGTGCCGCTGCTTTAATACCGGGATCCATGCAGAGCTTACCTGGTAGTGCCTTGTCAAGTCCCCATCTACCCTCGCGACAGCCGCAGCAGCTGCAGCAGCGGTCACTTAGTTCCAATAGCTTGCTACAACAAAATCATTCAACTGGCTCCCAAGGCAACCAGACCTTGCAGCAACAGATGATCCAGCAACTGCTACAGGAGATGTCCAATAACAGCGGGGGAGGACAACAATCTCTTCCCAGTCCCAGCACAAATGGGAGTGTGGGAAGGAATGGATTGAGTTTTGGAGGCAACAATCCAGCGGCAGCTCCATCCACCTCCAATGTGTCTGGTAGTCACGGCCCTGCTCCAAGCAGGAGTAACAGCTTCAAAGCCACTGCAAACAGTGACTCTTCCGCAGGAGGTGGTGGTGGTAACAATGCCTACAACCAGAGAGCCCCGGATTTACCCTCAAACCTTCACTTGCAGGAGGATCTGGTACAAGACATTGCCCGTGAATTCACAGAAAATGGTTTCTTTAACAGCGATCTTGACGATACCATGTATGGCTGGAAGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001666 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0010243 GO:0010272 GO:0014070 GO:0022414 GO:0032501 GO:0032502 GO:0033554 GO:0035670 GO:0036293 GO:0042221 GO:0042493 GO:0043207 GO:0046677 GO:0046898 GO:0046982 GO:0046983 GO:0047484 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048580 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060090 GO:0060992 GO:0061458 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0080134 GO:0090567 GO:0097159 GO:0097305 GO:0099402 GO:1901000 GO:1901001 GO:1901363 GO:1901654 GO:1901698 GO:1901700 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LIM_bind

Protein Analysis

860

Amino Acids

93.97

Weight (kDa)

9.2

Isoelectric Point (pI)

66.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LIM_bind	PF01803	304 - 564	4.9e-66	LIM-domain binding protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62090 AT5G62090 AT5G62090
fragaria_vesca	FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060 FvH4_7g29060
malus_domestica	MD01G1197300.v1.1 MD07G1264600.v1.1
prunus_persica	Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1 Prupe.2G290500_v2.0.a1
pyrus_communis	pycom01g20770 pycom07g24320
rosa_chinensis	RchiOBHm_Chr1g0376781
rosa_laevigata	RLG00000026560 RLG00000026570 RLG00000026571
rosa_multiflora	Rmu_sc0002113.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281740
rosa_rugosa	Rorug01G0398100 Rorug01G0398200.1 Rorug01G0398300 Rorug01G0398300
rosa_samantha	Rh1AG415500 Rh1BG375000 Rh1CG388800 Rh1DG405600
rosa_wichuraiana	Rw1G036450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1405
Acc36I	ACCTGC	1 cut(s)	1405
AccB1I	GGYRCC	2 cut(s)	4, 2021
AccB7I	CCANNNNNTGG	2 cut(s)	50, 1852
AccBSI	CCGCTC	2 cut(s)	201, 1875
AccII	CGCG	3 cut(s)	547, 1088, 2095
AcoI	YGGCCR	1 cut(s)	1716
AcsI	RAATTY	8 cut(s)	54, 211, 430, 441, 1172, 1361, 1939, 2516
AcuI	CTGAAG	1 cut(s)	704
AcvI	CACGTG	1 cut(s)	1220
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	4 cut(s)	264, 552, 1521, 2499
AfiI	CCNNNNNNNGG	9 cut(s)	50, 146, 147, 173, 538, 890, 1682, 1785, 1852
AflIII	ACRYGT	1 cut(s)	1086
AjnI	CCWGG	3 cut(s)	553, 1819, 2059
AjuI	GAANNNNNNNTTGG	2 cut(s)	1158, 1190
Alw21I	GWGCWC	2 cut(s)	907, 1768
Alw26I	GTCTC	2 cut(s)	84, 823
AlwNI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
Ama87I	CYCGRG	1 cut(s)	12
AoxI	GGCC	6 cut(s)	482, 585, 780, 1673, 1716, 2359
ApaI	GGGCCC	1 cut(s)	784
ApoI	RAATTY	8 cut(s)	54, 211, 430, 441, 1172, 1361, 1939, 2516
Asp700I	GAANNNNTTC	4 cut(s)	630, 1149, 1386, 1389
AspLEI	GCGC	3 cut(s)	324, 547, 882
AspS9I	GGNCC	8 cut(s)	164, 275, 482, 586, 780, 781, 1673, 2360
AsuC2I	CCSGG	3 cut(s)	141, 2040, 2459
AsuHPI	GGTGA	4 cut(s)	33, 327, 658, 1429
AvaI	CYCGRG	1 cut(s)	12
AvaII	GGWCC	2 cut(s)	164, 275
AxyI	CCTNAGG	1 cut(s)	1071
BaeGI	GKGCMC	1 cut(s)	784
BaeI	ACNNNNGTAYC	2 cut(s)	641, 674
BamHI	GGATCC	3 cut(s)	571, 673, 2042
BanI	GGYRCC	2 cut(s)	4, 2021
BanII	GRGCYC	2 cut(s)	784, 2458
BarI	GAAGNNNNNNTAC	4 cut(s)	618, 650, 1219, 1251
BauI	CACGAG	1 cut(s)	1002
BbrPI	CACGTG	1 cut(s)	1220
BbsI	GAAGAC	3 cut(s)	30, 387, 1381
Bbv12I	GWGCWC	2 cut(s)	907, 1768
BccI	CCATC	8 cut(s)	65, 383, 884, 1011, 1846, 2011, 2091, 2338
BceAI	ACGGC	3 cut(s)	488, 752, 2374
BciT130I	CCWGG	3 cut(s)	555, 1821, 2061
BcnI	CCSGG	3 cut(s)	141, 2040, 2459
BcoDI	GTCTC	2 cut(s)	84, 823
BfaI	CTAG	2 cut(s)	489, 1155
BfmI	CTRYAG	5 cut(s)	635, 773, 1654, 2111, 2213
BfoI	RGCGCY	1 cut(s)	883
BfuAI	ACCTGC	1 cut(s)	1405
BglI	GCCNNNNNGGC	1 cut(s)	1715
BglII	AGATCT	1 cut(s)	1611
Bme1390I	CCNGG	6 cut(s)	141, 555, 1821, 2040, 2061, 2459
Bme18I	GGWCC	2 cut(s)	164, 275
BmeT110I	CYCGRG	1 cut(s)	12
BmgT120I	GGNCC	8 cut(s)	164, 275, 482, 586, 780, 781, 1673, 2360
BmiI	GGNNCC	9 cut(s)	6, 277, 559, 573, 675, 782, 2023, 2044, 2167
BmrFI	CCNGG	6 cut(s)	141, 555, 1821, 2040, 2061, 2459
BmrI	ACTGGG	4 cut(s)	156, 697, 778, 2253
BmsI	GCATC	9 cut(s)	241, 309, 341, 906, 1057, 1719, 1728, 1825, 1979
BmuI	ACTGGG	4 cut(s)	156, 697, 778, 2253
BpiI	GAAGAC	3 cut(s)	30, 387, 1381
BplI	GAGNNNNNCTC	2 cut(s)	980, 1012
BpmI	CTGGAG	3 cut(s)	42, 291, 1709
Bpu10I	CCTNAGC	1 cut(s)	1767
BpuEI	CTTGAG	2 cut(s)	124, 1942
BpuMI	CCSGG	3 cut(s)	141, 2040, 2459
Bsa29I	ATCGAT	2 cut(s)	380, 1191
BsaAI	YACGTR	1 cut(s)	1220
BsaJI	CCNNGG	7 cut(s)	64, 537, 688, 1700, 2017, 2170, 2457
BsaWI	WCCGGW	1 cut(s)	166
BsaXI	ACNNNNNCTCC	4 cut(s)	534, 564, 1547, 1577
Bsc4I	CCNNNNNNNGG	9 cut(s)	50, 146, 147, 173, 538, 890, 1682, 1785, 1852
Bse1I	ACTGG	7 cut(s)	151, 523, 703, 784, 863, 2167, 2259
Bse21I	CCTNAGG	1 cut(s)	1071
Bse3DI	GCAATG	4 cut(s)	861, 1100, 1811, 2505
BseBI	CCWGG	3 cut(s)	555, 1821, 2061
BseCI	ATCGAT	2 cut(s)	380, 1191
BseDI	CCNNGG	7 cut(s)	64, 537, 688, 1700, 2017, 2170, 2457
BseGI	GGATG	5 cut(s)	76, 394, 509, 1816, 2330
BseLI	CCNNNNNNNGG	9 cut(s)	50, 146, 147, 173, 538, 890, 1682, 1785, 1852
BseMI	GCAATG	4 cut(s)	861, 1100, 1811, 2505
BseMII	CTCAG	8 cut(s)	47, 95, 431, 1085, 1454, 1502, 1629, 1781
BseNI	ACTGG	7 cut(s)	151, 523, 703, 784, 863, 2167, 2259
BseRI	GAGGAG	1 cut(s)	990
BseSI	GKGCMC	1 cut(s)	784
BseYI	CCCAGC	1 cut(s)	2264
Bsh1236I	CGCG	3 cut(s)	547, 1088, 2095
BshFI	GGCC	6 cut(s)	484, 587, 782, 1675, 1718, 2361
BshNI	GGYRCC	2 cut(s)	4, 2021
BshVI	ATCGAT	2 cut(s)	380, 1191
BsiHKAI	GWGCWC	2 cut(s)	907, 1768
BsiHKCI	CYCGRG	1 cut(s)	12
BsiSI	CCGG	4 cut(s)	141, 167, 2039, 2459
BslFI	GGGAC	5 cut(s)	191, 261, 684, 2064, 2247
BslI	CCNNNNNNNGG	9 cut(s)	50, 146, 147, 173, 538, 890, 1682, 1785, 1852
BsmAI	GTCTC	2 cut(s)	84, 823
BsmFI	GGGAC	5 cut(s)	191, 261, 684, 2064, 2247
BsnI	GGCC	6 cut(s)	484, 587, 782, 1675, 1718, 2361
BsoBI	CYCGRG	1 cut(s)	12
Bsp120I	GGGCCC	1 cut(s)	780
Bsp1286I	GDGCHC	4 cut(s)	784, 907, 1768, 2458
Bsp19I	CCATGG	1 cut(s)	537
Bsp68I	TCGCGA	1 cut(s)	2095
BspANI	GGCC	6 cut(s)	484, 587, 782, 1675, 1718, 2361
BspCNI	CTCAG	8 cut(s)	46, 94, 430, 1084, 1453, 1501, 1628, 1780
BspDI	ATCGAT	2 cut(s)	380, 1191
BspFNI	CGCG	3 cut(s)	547, 1088, 2095
BspHI	TCATGA	1 cut(s)	1245
BspLI	GGNNCC	9 cut(s)	6, 277, 559, 573, 675, 782, 2023, 2044, 2167
BspMAI	CTGCAG	3 cut(s)	777, 1658, 2115
BspMI	ACCTGC	1 cut(s)	1405
BspT107I	GGYRCC	2 cut(s)	4, 2021
BsrBI	CCGCTC	2 cut(s)	201, 1875
BsrDI	GCAATG	4 cut(s)	861, 1100, 1811, 2505
BsrI	ACTGG	7 cut(s)	151, 523, 703, 784, 863, 2167, 2259
BssECI	CCNNGG	7 cut(s)	64, 537, 688, 1700, 2017, 2170, 2457
BssSI	CACGAG	1 cut(s)	1002
BssT1I	CCWWGG	5 cut(s)	64, 537, 688, 2017, 2170
Bst2BI	CACGAG	1 cut(s)	1002
Bst2UI	CCWGG	3 cut(s)	555, 1821, 2061
Bst4CI	ACNGT	3 cut(s)	657, 825, 2405
Bst6I	CTCTTC	5 cut(s)	130, 355, 1962, 2259, 2416
BstAPI	GCANNNNNTGC	4 cut(s)	763, 1738, 1889, 2110
BstBAI	YACGTR	1 cut(s)	1220
BstC8I	GCNNGC	4 cut(s)	298, 1542, 1707, 2141
BstDSI	CCRYGG	1 cut(s)	537
BstF5I	GGATG	5 cut(s)	76, 394, 509, 1816, 2330
BstFNI	CGCG	3 cut(s)	547, 1088, 2095
BstH2I	RGCGCY	1 cut(s)	883
BstHHI	GCGC	3 cut(s)	324, 547, 882
BstMAI	GTCTC	2 cut(s)	84, 823
BstNI	CCWGG	3 cut(s)	555, 1821, 2061
BstNSI	RCATGY	3 cut(s)	322, 370, 1709
BstSCI	CCNGG	6 cut(s)	139, 553, 1819, 2038, 2059, 2457
BstSFI	CTRYAG	5 cut(s)	635, 773, 1654, 2111, 2213
BstSLI	GKGCMC	1 cut(s)	784
BstUI	CGCG	3 cut(s)	547, 1088, 2095
BstV2I	GAAGAC	3 cut(s)	30, 387, 1381
BstX2I	RGATCY	8 cut(s)	571, 673, 1472, 1482, 1495, 1611, 2042, 2491
BstXI	CCANNNNNNTGG	2 cut(s)	71, 1856
BstYI	RGATCY	8 cut(s)	571, 673, 1472, 1482, 1495, 1611, 2042, 2491
Bsu15I	ATCGAT	2 cut(s)	380, 1191
Bsu36I	CCTNAGG	1 cut(s)	1071
BsuRI	GGCC	6 cut(s)	484, 587, 782, 1675, 1718, 2361
BsuTUI	ATCGAT	2 cut(s)	380, 1191
BtgI	CCRYGG	1 cut(s)	537
BtsCI	GGATG	5 cut(s)	76, 394, 509, 1816, 2330
BtsI	GCAGTG	3 cut(s)	1186, 1710, 2394
BtsIMutI	CAGTG	4 cut(s)	1186, 1710, 2394, 2410
BtuMI	TCGCGA	1 cut(s)	2095
BveI	ACCTGC	1 cut(s)	1405
Cac8I	GCNNGC	4 cut(s)	298, 1542, 1707, 2141
CaiI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
CciI	TCATGA	1 cut(s)	1245
CfoI	GCGC	3 cut(s)	324, 547, 882
Cfr13I	GGNCC	8 cut(s)	164, 275, 482, 586, 780, 781, 1673, 2360
ClaI	ATCGAT	2 cut(s)	380, 1191
CpoI	CGGWCCG	1 cut(s)	164
CseI	GACGC	1 cut(s)	1094
CsiI	ACCWGGT	1 cut(s)	2059
Csp6I	GTAC	4 cut(s)	263, 551, 1520, 2498
CspI	CGGWCCG	1 cut(s)	164
CviQI	GTAC	4 cut(s)	263, 551, 1520, 2498
DraI	TTTAAA	1 cut(s)	1344
DraIII	CACNNNGTG	1 cut(s)	1061
EaeI	YGGCCR	1 cut(s)	1716
Eam1104I	CTCTTC	5 cut(s)	130, 355, 1962, 2259, 2416
EarI	CTCTTC	5 cut(s)	130, 355, 1962, 2259, 2416
Eco130I	CCWWGG	5 cut(s)	64, 537, 688, 2017, 2170
Eco24I	GRGCYC	2 cut(s)	784, 2458
Eco32I	GATATC	1 cut(s)	616
Eco47I	GGWCC	2 cut(s)	164, 275
Eco57I	CTGAAG	1 cut(s)	704
Eco72I	CACGTG	1 cut(s)	1220
Eco81I	CCTNAGG	1 cut(s)	1071
Eco88I	CYCGRG	1 cut(s)	12
EcoO109I	RGGNCCY	3 cut(s)	275, 482, 780
EcoRI	GAATTC	5 cut(s)	211, 430, 1361, 1939, 2516
EcoRII	CCWGG	3 cut(s)	553, 1819, 2059
EcoRV	GATATC	1 cut(s)	616
EcoT14I	CCWWGG	5 cut(s)	64, 537, 688, 2017, 2170
EcoT38I	GRGCYC	2 cut(s)	784, 2458
ErhI	CCWWGG	5 cut(s)	64, 537, 688, 2017, 2170
FalI	AAGNNNNNCTT	4 cut(s)	702, 734, 1374, 1406
FaqI	GGGAC	5 cut(s)	191, 261, 684, 2064, 2247
FauI	CCCGC	1 cut(s)	2228
FokI	GGATG	5 cut(s)	83, 401, 496, 1803, 2317
FriOI	GRGCYC	2 cut(s)	784, 2458
FspBI	CTAG	2 cut(s)	489, 1155
GlaI	GCGC	3 cut(s)	323, 546, 881
GsaI	CCCAGC	1 cut(s)	2268
GsuI	CTGGAG	3 cut(s)	42, 291, 1709
HaeII	RGCGCY	1 cut(s)	883
HaeIII	GGCC	6 cut(s)	484, 587, 782, 1675, 1718, 2361
HapII	CCGG	4 cut(s)	141, 167, 2039, 2459
HgaI	GACGC	1 cut(s)	1094
HhaI	GCGC	3 cut(s)	324, 547, 882
Hin6I	GCGC	3 cut(s)	322, 545, 880
HinP1I	GCGC	3 cut(s)	322, 545, 880
HincII	GTYRAC	2 cut(s)	94, 1648
HindII	GTYRAC	2 cut(s)	94, 1648
HinfI	GANTC	6 cut(s)	311, 451, 1185, 1420, 1912, 2408
HpaI	GTTAAC	1 cut(s)	94
HpaII	CCGG	4 cut(s)	141, 167, 2039, 2459
HphI	GGTGA	4 cut(s)	33, 327, 658, 1429
Hpy166II	GTNNAC	3 cut(s)	94, 1223, 1648
Hpy188I	TCNGA	3 cut(s)	1443, 1477, 1618
Hpy8I	GTNNAC	3 cut(s)	94, 1223, 1648
HpyCH4III	ACNGT	3 cut(s)	657, 825, 2405
HpyCH4IV	ACGT	3 cut(s)	943, 1219, 1225
HpySE526I	ACGT	3 cut(s)	943, 1219, 1225
HspAI	GCGC	3 cut(s)	322, 545, 880
KspAI	GTTAAC	1 cut(s)	94
LmnI	GCTCC	8 cut(s)	542, 1414, 1728, 1750, 1865, 2171, 2332, 2371
LweI	GCATC	9 cut(s)	241, 309, 341, 906, 1057, 1719, 1728, 1825, 1979
MabI	ACCWGGT	1 cut(s)	2059
MaeI	CTAG	2 cut(s)	489, 1155
MaeII	ACGT	3 cut(s)	943, 1219, 1225
MbiI	CCGCTC	2 cut(s)	201, 1875
MfeI	CAATTG	1 cut(s)	1677
MflI	RGATCY	8 cut(s)	571, 673, 1472, 1482, 1495, 1611, 2042, 2491
MhlI	GDGCHC	4 cut(s)	784, 907, 1768, 2458
MluI	ACGCGT	1 cut(s)	1086
MlyI	GAGTC	3 cut(s)	320, 1194, 2402
MmeI	TCCRAC	2 cut(s)	378, 1233
MroXI	GAANNNNTTC	4 cut(s)	630, 1149, 1386, 1389
MseI	TTAA	7 cut(s)	93, 876, 1161, 1343, 1568, 2033, 2538
MspA1I	CMGCKG	7 cut(s)	937, 1529, 2027, 2110, 2119, 2235, 2321
MspI	CCGG	4 cut(s)	141, 167, 2039, 2459
MspR9I	CCNGG	6 cut(s)	141, 555, 1821, 2040, 2061, 2459
MunI	CAATTG	1 cut(s)	1677
MvaI	CCWGG	3 cut(s)	555, 1821, 2061
MvnI	CGCG	3 cut(s)	547, 1088, 2095
NciI	CCSGG	3 cut(s)	141, 2040, 2459
NcoI	CCATGG	1 cut(s)	537
NlaIV	GGNNCC	9 cut(s)	6, 277, 559, 573, 675, 782, 2023, 2044, 2167
NmeAIII	GCCGAG	1 cut(s)	1681
NmuCI	GTSAC	5 cut(s)	244, 1097, 2121, 2354, 2405
NruI	TCGCGA	1 cut(s)	2095
NspI	RCATGY	3 cut(s)	322, 370, 1709
PaeI	GCATGC	1 cut(s)	1709
PagI	TCATGA	1 cut(s)	1245
PaqCI	CACCTGC	1 cut(s)	1405
PdmI	GAANNNNTTC	4 cut(s)	630, 1149, 1386, 1389
PfeI	GAWTC	3 cut(s)	451, 1420, 1912
PflMI	CCANNNNNTGG	2 cut(s)	50, 1852
PfoI	TCCNGGA	2 cut(s)	139, 1819
PleI	GAGTC	3 cut(s)	319, 1193, 2402
PmaCI	CACGTG	1 cut(s)	1220
PmlI	CACGTG	1 cut(s)	1220
PpsI	GAGTC	3 cut(s)	319, 1193, 2402
Ppu21I	YACGTR	1 cut(s)	1220
PpuMI	RGGWCCY	1 cut(s)	275
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	3 cut(s)	553, 1819, 2059
PspCI	CACGTG	1 cut(s)	1220
PspFI	CCCAGC	1 cut(s)	2264
PspGI	CCWGG	3 cut(s)	553, 1819, 2059
PspN4I	GGNNCC	9 cut(s)	6, 277, 559, 573, 675, 782, 2023, 2044, 2167
PspOMI	GGGCCC	1 cut(s)	780
PspPI	GGNCC	8 cut(s)	164, 275, 482, 586, 780, 781, 1673, 2360
PspPPI	RGGWCCY	1 cut(s)	275
PstI	CTGCAG	3 cut(s)	777, 1658, 2115
PstNI	CAGNNNCTG	4 cut(s)	661, 1915, 2110, 2209
PsuI	RGATCY	8 cut(s)	571, 673, 1472, 1482, 1495, 1611, 2042, 2491
PvuII	CAGCTG	2 cut(s)	1529, 2110
RruI	TCGCGA	1 cut(s)	2095
RsaI	GTAC	4 cut(s)	264, 552, 1521, 2499
RsaNI	GTAC	4 cut(s)	263, 551, 1520, 2498
Rsr2I	CGGWCCG	1 cut(s)	164
RsrII	CGGWCCG	1 cut(s)	164
SaqAI	TTAA	7 cut(s)	93, 876, 1161, 1343, 1568, 2033, 2538
Sau96I	GGNCC	8 cut(s)	164, 275, 482, 586, 780, 781, 1673, 2360
SchI	GAGTC	3 cut(s)	320, 1194, 2402
ScrFI	CCNGG	6 cut(s)	141, 555, 1821, 2040, 2061, 2459
SduI	GDGCHC	4 cut(s)	784, 907, 1768, 2458
SexAI	ACCWGGT	1 cut(s)	2059
SfaNI	GCATC	9 cut(s)	241, 309, 341, 906, 1057, 1719, 1728, 1825, 1979
SfcI	CTRYAG	5 cut(s)	635, 773, 1654, 2111, 2213
SinI	GGWCC	2 cut(s)	164, 275
SmlI	CTYRAG	2 cut(s)	103, 1921
SmoI	CTYRAG	2 cut(s)	103, 1921
SphI	GCATGC	1 cut(s)	1709
SspI	AATATT	1 cut(s)	361
SspMI	CTAG	2 cut(s)	489, 1155
StyD4I	CCNGG	6 cut(s)	139, 553, 1819, 2038, 2059, 2457
StyI	CCWWGG	5 cut(s)	64, 537, 688, 2017, 2170
TaaI	ACNGT	3 cut(s)	657, 825, 2405
TaiI	ACGT	3 cut(s)	946, 1222, 1228
TaqI	TCGA	4 cut(s)	380, 594, 694, 1191
TaqII	GACCGA	1 cut(s)	152
TatI	WGTACW	1 cut(s)	262
TauI	GCSGC	5 cut(s)	940, 1718, 2027, 2104, 2324
TfiI	GAWTC	3 cut(s)	451, 1420, 1912
Tru1I	TTAA	7 cut(s)	93, 876, 1161, 1343, 1568, 2033, 2538
Tru9I	TTAA	7 cut(s)	93, 876, 1161, 1343, 1568, 2033, 2538
TscAI	CASTG	4 cut(s)	1186, 1717, 2401, 2410
TseFI	GTSAC	5 cut(s)	244, 1097, 2121, 2354, 2405
Tsp45I	GTSAC	5 cut(s)	244, 1097, 2121, 2354, 2405
TspDTI	ATGAA	7 cut(s)	99, 197, 1179, 1395, 1649, 1853, 1952
TspGWI	ACGGA	1 cut(s)	388
TspRI	CASTG	4 cut(s)	1186, 1717, 2401, 2410
Van91I	CCANNNNNTGG	2 cut(s)	50, 1852
VpaK11BI	GGWCC	2 cut(s)	164, 275
XapI	RAATTY	8 cut(s)	54, 211, 430, 441, 1172, 1361, 1939, 2516
XceI	RCATGY	3 cut(s)	322, 370, 1709
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1853
XmnI	GAANNNNTTC	4 cut(s)	630, 1149, 1386, 1389
XspI	CTAG	2 cut(s)	489, 1155

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.