pycom01g22230

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
19918945 .. 19921021
2077 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g22230.2

Sequence Viewer

Length: 1506 bp
ATGGCCTCTACTTATTTTTCTACTTATTTGGTGGCACTGTTCTTCTTGGTTGTAGCTGGGTTTGATACCTGCTCGGCTAGCCGGATTGGTTTGGGTTCGAGGCTGTTGGCTAGAGAGAACCAAACGTTCGTCTCAGATAATGGCACATTTGCTTTAGGGTTCACTCCAACGTCGGACGACGACTACAGACTTCAACTGGCAATTTGGTTTGCGGAGCTTCCCGGAGATCGAACCATAGTATGGTCTGCTAACAGGAACTCAGCCGTCTCCAACAATGCAATCCTAGAGCTTGATACAACTGGAAACCTTGTCCTCACGGATGGAGATGCTACCACGTGGACCTCAAACACCTCCGGCGCTGGTGTTGAAGGCGCAACATTGCAAGAATCTGGAAACTTCGTTATCTACAATGATGTCAAGGACCCTGTGTGGCAGAGTTTCTCACACCCATCTGACACTCTCCTCCCAAATCAACCTCTTTCAGTCTCTTTAGAGCTAACAACTTCGAAGTCCCCCTCACATGGTGGTTACTATGCACTCAAAATGCTTCAACAACGCGCTTCCTTAAGCCTTGCCTTGACTTACAACGTGCCTGAAACTTTATACAATTCCTCCCCTGAATCATACTATAACTATTCTTATTGGAACGGACCAGACATATCAAATGTAACTGGGGATGTTGCAGCGGTTTTAGAGGAAGCAGGTAGCTTTGGAATTGTGTATGGGGAGTCATCAGATGGAGCTGTTTATGTGTACAAGAATGATGGTGATAATGGGGGACTATCAGCAGCATCAAACATATCAACCAGATCATCGGTTCTTCGAAGACTGTTTCTCGAGAGTAATGGGAATTTGCGCTTGTATCGTTGGGATAATGATGTTAACGGGTCAAGGCAATGGGTGCCAGAGTGGGCTGCAGTTTCAACACCATGTGACATTGCTGGAATTTGTGGCAATGGGATATGTAATTTGGATATGAGTATGACTAATGCTTCTTGCACATGTCTGCCGGGGACTTATAAGGTATCTGGGGGAAGTCAGTGTTCAGAAAATTCATCACTTATCGGAAAATGTGAACGGCAGAGTAATTATGGGTCATCCCAGTTTAGAACTTCAACGATGCAGCAAACCAATTACTATTTTCCAGAATTTTCAGTCATAGCAAACTACAGCGATGTTGATAATGTAACAAAATGTGGAGATATTTGTCTAGCTGATTGTGAATGTGTTGCTTCAGTTTACAGCCTTGATGACGAAAGTCCATACTGTTGGGTTTTGAGAAGCTTGGGTTTTGGTGGCTATGAGGATCCTGGTTCCACTCTGTTTGTGAAGATTAGGTCTAATGGCTCAGAGGGCGATGCACAAGGATCCGGGGAGTCTTCAAAGGGGTCTGGTAACCGGCGAACAAAAGTTTTGGTTATTCCTATTGTTCTTAGCATGACCTTCCTTGTTGCCCTCCTATTTCTTTTGCTATATTACAATGTGCATAGGAGGATCGATCCTTGA

Protein Analysis

502

Amino Acids

54.36

Weight (kDa)

4.53

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1020
Acc36I ACCTGC 2 cut(s) 77, 692
AccB1I GGYRCC 1 cut(s) 901
AccB7I CCANNNNNTGG 1 cut(s) 240
AccII CGCG 1 cut(s) 558
AciI CCGC 2 cut(s) 212, 686
AclI AACGTT 1 cut(s) 125
AclWI GGATC 6 cut(s) 1301, 1314, 1362, 1375, 1493, 1502
AcsI RAATTY 4 cut(s) 850, 945, 1051, 1148
AcuI CTGAAG 1 cut(s) 1218
AcvI CACGTG 1 cut(s) 336
AdeI CACNNNGTG 2 cut(s) 524, 932
AfaI GTAC 1 cut(s) 755
AfiI CCNNNNNNNGG 2 cut(s) 240, 521
AflII CTTAAG 1 cut(s) 565
AflIII ACRYGT 1 cut(s) 1001
AgsI TTSAA 6 cut(s) 194, 368, 551, 924, 1116, 1383
AjnI CCWGG 1 cut(s) 1309
AluBI AGCT 8 cut(s) 56, 217, 289, 496, 708, 743, 1214, 1284
AluI AGCT 8 cut(s) 56, 217, 289, 496, 708, 743, 1214, 1284
Alw26I GTCTC 3 cut(s) 136, 271, 490
AlwI GGATC 6 cut(s) 1301, 1314, 1362, 1375, 1493, 1502
Ama87I CYCGRG 1 cut(s) 836
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 4 cut(s) 683, 788, 914, 1123
ApoI RAATTY 4 cut(s) 850, 945, 1051, 1148
AspLEI GCGC 4 cut(s) 359, 374, 560, 858
AspS9I GGNCC 3 cut(s) 339, 421, 650
AsuC2I CCSGG 3 cut(s) 222, 1011, 1372
AsuHPI GGTGA 1 cut(s) 779
AsuII TTCGAA 2 cut(s) 506, 823
AsuNHI GCTAGC 1 cut(s) 77
AvaI CYCGRG 1 cut(s) 836
AvaII GGWCC 3 cut(s) 339, 421, 650
BamHI GGATCC 2 cut(s) 1306, 1367
BanI GGYRCC 1 cut(s) 901
BbrPI CACGTG 1 cut(s) 336
BbsI GAAGAC 2 cut(s) 832, 1371
BbvI GCAGC 4 cut(s) 695, 800, 901, 1135
BccI CCATC 4 cut(s) 314, 457, 731, 758
BceAI ACGGC 2 cut(s) 248, 1094
BciT130I CCWGG 1 cut(s) 1311
BcnI CCSGG 3 cut(s) 222, 1011, 1372
BcoDI GTCTC 3 cut(s) 136, 271, 490
BfaI CTAG 4 cut(s) 78, 111, 284, 1211
BfmI CTRYAG 3 cut(s) 184, 915, 1168
BfoI RGCGCY 1 cut(s) 360
BfrI CTTAAG 1 cut(s) 565
BfuAI ACCTGC 2 cut(s) 77, 692
BisI GCNGC 4 cut(s) 684, 789, 915, 1124
BlsI GCNGC 4 cut(s) 685, 790, 916, 1125
Bme1390I CCNGG 4 cut(s) 222, 1011, 1311, 1372
Bme18I GGWCC 3 cut(s) 339, 421, 650
BmeT110I CYCGRG 1 cut(s) 836
BmgT120I GGNCC 3 cut(s) 339, 421, 650
BmiI GGNNCC 5 cut(s) 423, 903, 1308, 1315, 1369
BmrFI CCNGG 4 cut(s) 222, 1011, 1311, 1372
BmrI ACTGGG 2 cut(s) 681, 1096
BmsI GCATC 4 cut(s) 316, 800, 1110, 1348
BmtI GCTAGC 1 cut(s) 81
BmuI ACTGGG 2 cut(s) 681, 1096
BoxI GACNNNNGTC 1 cut(s) 1257
BpiI GAAGAC 2 cut(s) 832, 1371
Bpu14I TTCGAA 2 cut(s) 506, 823
BpuMI CCSGG 3 cut(s) 222, 1011, 1372
Bsa29I ATCGAT 1 cut(s) 1497
BsaAI YACGTR 1 cut(s) 336
BsaJI CCNNGG 2 cut(s) 1010, 1371
BsaXI ACNNNNNCTCC 2 cut(s) 596, 626
Bsc4I CCNNNNNNNGG 2 cut(s) 240, 521
Bse118I RCCGGY 1 cut(s) 1398
Bse1I ACTGG 4 cut(s) 201, 304, 676, 1102
Bse3DI GCAATG 4 cut(s) 377, 902, 936, 961
BseBI CCWGG 1 cut(s) 1311
BseCI ATCGAT 1 cut(s) 1497
BseDI CCNNGG 2 cut(s) 1010, 1371
BseGI GGATG 3 cut(s) 325, 682, 1097
BseLI CCNNNNNNNGG 2 cut(s) 240, 521
BseMI GCAATG 4 cut(s) 377, 902, 936, 961
BseMII CTCAG 3 cut(s) 147, 273, 1362
BseNI ACTGG 4 cut(s) 201, 304, 676, 1102
BseRI GAGGAG 1 cut(s) 452
BseXI GCAGC 4 cut(s) 695, 800, 901, 1135
BseYI CCCAGC 1 cut(s) 56
Bsh1236I CGCG 1 cut(s) 558
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 901
BshVI ATCGAT 1 cut(s) 1497
BsiHKCI CYCGRG 1 cut(s) 836
BsiSI CCGG 6 cut(s) 82, 222, 354, 1010, 1371, 1399
BslFI GGGAC 3 cut(s) 496, 792, 1027
BslI CCNNNNNNNGG 2 cut(s) 240, 521
BsmAI GTCTC 3 cut(s) 136, 271, 490
BsmBI CGTCTC 2 cut(s) 136, 271
BsmFI GGGAC 3 cut(s) 496, 792, 1027
BsnI GGCC 1 cut(s) 5
BsoBI CYCGRG 1 cut(s) 836
Bsp119I TTCGAA 2 cut(s) 506, 823
Bsp1407I TGTACA 1 cut(s) 753
Bsp143I GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
BspACI CCGC 2 cut(s) 212, 686
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 3 cut(s) 146, 272, 1361
BspDI ATCGAT 1 cut(s) 1497
BspFNI CGCG 1 cut(s) 558
BspLI GGNNCC 5 cut(s) 423, 903, 1308, 1315, 1369
BspMAI CTGCAG 1 cut(s) 919
BspMI ACCTGC 2 cut(s) 77, 692
BspOI GCTAGC 1 cut(s) 81
BspPI GGATC 6 cut(s) 1301, 1314, 1362, 1375, 1493, 1502
BspT104I TTCGAA 2 cut(s) 506, 823
BspT107I GGYRCC 1 cut(s) 901
BspTI CTTAAG 1 cut(s) 565
BsrDI GCAATG 4 cut(s) 377, 902, 936, 961
BsrFI RCCGGY 1 cut(s) 1398
BsrGI TGTACA 1 cut(s) 753
BsrI ACTGG 4 cut(s) 201, 304, 676, 1102
BssAI RCCGGY 1 cut(s) 1398
BssECI CCNNGG 2 cut(s) 1010, 1371
BssMI GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
Bst2UI CCWGG 1 cut(s) 1311
Bst4CI ACNGT 3 cut(s) 39, 831, 1268
BstAFI CTTAAG 1 cut(s) 565
BstAPI GCANNNNNTGC 1 cut(s) 901
BstAUI TGTACA 1 cut(s) 753
BstBAI YACGTR 1 cut(s) 336
BstBI TTCGAA 2 cut(s) 506, 823
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 4 cut(s) 133, 259, 1348, 1433
BstEII GGTNACC 1 cut(s) 1394
BstF5I GGATG 3 cut(s) 325, 682, 1097
BstFNI CGCG 1 cut(s) 558
BstH2I RGCGCY 1 cut(s) 360
BstHHI GCGC 4 cut(s) 359, 374, 560, 858
BstKTI GATC 6 cut(s) 229, 812, 1309, 1370, 1497, 1501
BstMAI GTCTC 3 cut(s) 136, 271, 490
BstMBI GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
BstMWI GCNNNNNNNGC 3 cut(s) 78, 901, 1353
BstNI CCWGG 1 cut(s) 1311
BstNSI RCATGY 1 cut(s) 1005
BstPAI GACNNNNGTC 1 cut(s) 1257
BstPI GGTNACC 1 cut(s) 1394
BstSCI CCNGG 4 cut(s) 220, 1009, 1309, 1370
BstSFI CTRYAG 3 cut(s) 184, 915, 1168
BstUI CGCG 1 cut(s) 558
BstV1I GCAGC 4 cut(s) 695, 800, 901, 1135
BstV2I GAAGAC 2 cut(s) 832, 1371
BstX2I RGATCY 2 cut(s) 1306, 1367
BstXI CCANNNNNNTGG 1 cut(s) 1269
BstYI RGATCY 2 cut(s) 1306, 1367
Bsu15I ATCGAT 1 cut(s) 1497
BsuRI GGCC 1 cut(s) 5
BsuTUI ATCGAT 1 cut(s) 1497
BtgZI GCGATG 2 cut(s) 1188, 1371
BtsCI GGATG 3 cut(s) 325, 682, 1097
BtsIMutI CAGTG 2 cut(s) 35, 1046
BveI ACCTGC 2 cut(s) 77, 692
Cac8I GCNNGC 1 cut(s) 79
CfoI GCGC 4 cut(s) 359, 374, 560, 858
Cfr10I RCCGGY 1 cut(s) 1398
Cfr13I GGNCC 3 cut(s) 339, 421, 650
ClaI ATCGAT 1 cut(s) 1497
Csp6I GTAC 1 cut(s) 754
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CviAII CATG 4 cut(s) 521, 930, 1002, 1438
CviQI GTAC 1 cut(s) 754
DdeI CTNAG 4 cut(s) 133, 259, 1348, 1433
DpnI GATC 6 cut(s) 228, 811, 1308, 1369, 1496, 1500
DpnII GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
DraIII CACNNNGTG 2 cut(s) 524, 932
Eco47I GGWCC 3 cut(s) 339, 421, 650
Eco57I CTGAAG 1 cut(s) 1218
Eco72I CACGTG 1 cut(s) 336
Eco88I CYCGRG 1 cut(s) 836
Eco91I GGTNACC 1 cut(s) 1394
EcoO109I RGGNCCY 1 cut(s) 421
EcoO65I GGTNACC 1 cut(s) 1394
EcoRII CCWGG 1 cut(s) 1309
Esp3I CGTCTC 2 cut(s) 136, 271
FaeI CATG 4 cut(s) 524, 933, 1005, 1441
FaqI GGGAC 3 cut(s) 496, 792, 1027
FatI CATG 4 cut(s) 520, 929, 1001, 1437
Fnu4HI GCNGC 4 cut(s) 684, 789, 915, 1124
FokI GGATG 3 cut(s) 332, 689, 1084
Fsp4HI GCNGC 4 cut(s) 684, 789, 915, 1124
FspBI CTAG 4 cut(s) 78, 111, 284, 1211
GlaI GCGC 4 cut(s) 358, 373, 559, 857
GluI GCNGC 4 cut(s) 684, 789, 915, 1124
GsaI CCCAGC 1 cut(s) 60
HaeII RGCGCY 1 cut(s) 360
HaeIII GGCC 1 cut(s) 5
HapII CCGG 6 cut(s) 82, 222, 354, 1010, 1371, 1399
HhaI GCGC 4 cut(s) 359, 374, 560, 858
Hin1II CATG 4 cut(s) 524, 933, 1005, 1441
Hin6I GCGC 4 cut(s) 357, 372, 558, 856
HinP1I GCGC 4 cut(s) 357, 372, 558, 856
HincII GTYRAC 1 cut(s) 883
HindII GTYRAC 1 cut(s) 883
HindIII AAGCTT 1 cut(s) 1282
HinfI GANTC 4 cut(s) 386, 620, 728, 1376
HpaI GTTAAC 1 cut(s) 883
HpaII CCGG 6 cut(s) 82, 222, 354, 1010, 1371, 1399
HphI GGTGA 1 cut(s) 779
Hpy166II GTNNAC 6 cut(s) 162, 339, 754, 883, 1076, 1240
Hpy188I TCNGA 7 cut(s) 136, 175, 454, 736, 1048, 1067, 1351
Hpy188III TCNNGA 4 cut(s) 390, 836, 838, 1145
Hpy8I GTNNAC 6 cut(s) 162, 339, 754, 883, 1076, 1240
Hpy99I CGWCG 2 cut(s) 175, 182
HpyAV CCTTC 2 cut(s) 362, 1453
HpyCH4III ACNGT 3 cut(s) 39, 831, 1268
HpyCH4IV ACGT 4 cut(s) 125, 170, 335, 588
HpyCH4V TGCA 9 cut(s) 278, 382, 536, 683, 917, 999, 1123, 1361, 1486
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 901, 1353
HpyF3I CTNAG 4 cut(s) 133, 259, 1348, 1433
HpySE526I ACGT 4 cut(s) 125, 170, 335, 588
Hsp92II CATG 4 cut(s) 524, 933, 1005, 1441
HspAI GCGC 4 cut(s) 357, 372, 558, 856
KspAI GTTAAC 1 cut(s) 883
Kzo9I GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
LmnI GCTCC 2 cut(s) 214, 740
Lsp1109I GCAGC 4 cut(s) 695, 800, 901, 1135
LweI GCATC 4 cut(s) 316, 800, 1110, 1348
MaeI CTAG 4 cut(s) 78, 111, 284, 1211
MaeII ACGT 4 cut(s) 125, 170, 335, 588
MaeIII GTNAC 5 cut(s) 527, 667, 932, 1186, 1394
MalI GATC 6 cut(s) 228, 811, 1308, 1369, 1496, 1500
MboI GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
MboII GAAGA 5 cut(s) 34, 812, 837, 1342, 1371
MflI RGATCY 2 cut(s) 1306, 1367
MlyI GAGTC 2 cut(s) 737, 1385
MmeI TCCRAC 3 cut(s) 153, 191, 294
MseI TTAA 2 cut(s) 566, 882
MspA1I CMGCKG 1 cut(s) 686
MspCI CTTAAG 1 cut(s) 565
MspI CCGG 6 cut(s) 82, 222, 354, 1010, 1371, 1399
MspR9I CCNGG 4 cut(s) 222, 1011, 1311, 1372
MvaI CCWGG 1 cut(s) 1311
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 3 cut(s) 78, 901, 1353
NciI CCSGG 3 cut(s) 222, 1011, 1372
NdeII GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
NheI GCTAGC 1 cut(s) 77
NlaIII CATG 4 cut(s) 524, 933, 1005, 1441
NlaIV GGNNCC 5 cut(s) 423, 903, 1308, 1315, 1369
NmeAIII GCCGAG 1 cut(s) 53
NmuCI GTSAC 1 cut(s) 932
NspI RCATGY 1 cut(s) 1005
NspV TTCGAA 2 cut(s) 506, 823
PaeR7I CTCGAG 1 cut(s) 836
PciI ACATGT 1 cut(s) 1001
PfeI GAWTC 2 cut(s) 386, 620
PflMI CCANNNNNTGG 1 cut(s) 240
PfoI TCCNGGA 1 cut(s) 220
PkrI GCNGC 4 cut(s) 685, 790, 916, 1125
PleI GAGTC 2 cut(s) 736, 1384
PmaCI CACGTG 1 cut(s) 336
PmlI CACGTG 1 cut(s) 336
PpsI GAGTC 2 cut(s) 736, 1384
Ppu21I YACGTR 1 cut(s) 336
PpuMI RGGWCCY 1 cut(s) 421
PscI ACATGT 1 cut(s) 1001
PshAI GACNNNNGTC 1 cut(s) 1257
PsiI TTATAA 1 cut(s) 1020
Psp1406I AACGTT 1 cut(s) 125
Psp5II RGGWCCY 1 cut(s) 421
Psp6I CCWGG 1 cut(s) 1309
PspCI CACGTG 1 cut(s) 336
PspEI GGTNACC 1 cut(s) 1394
PspFI CCCAGC 1 cut(s) 56
PspGI CCWGG 1 cut(s) 1309
PspN4I GGNNCC 5 cut(s) 423, 903, 1308, 1315, 1369
PspPI GGNCC 3 cut(s) 339, 421, 650
PspPPI RGGWCCY 1 cut(s) 421
PstI CTGCAG 1 cut(s) 919
PsuI RGATCY 2 cut(s) 1306, 1367
RsaI GTAC 1 cut(s) 755
RsaNI GTAC 1 cut(s) 754
SaqAI TTAA 2 cut(s) 566, 882
SatI GCNGC 4 cut(s) 684, 789, 915, 1124
Sau3AI GATC 6 cut(s) 226, 809, 1306, 1367, 1494, 1498
Sau96I GGNCC 3 cut(s) 339, 421, 650
SchI GAGTC 2 cut(s) 737, 1385
ScrFI CCNGG 4 cut(s) 222, 1011, 1311, 1372
SfaNI GCATC 4 cut(s) 316, 800, 1110, 1348
SfcI CTRYAG 3 cut(s) 184, 915, 1168
Sfr274I CTCGAG 1 cut(s) 836
SfuI TTCGAA 2 cut(s) 506, 823
SinI GGWCC 3 cut(s) 339, 421, 650
SlaI CTCGAG 1 cut(s) 836
SmlI CTYRAG 2 cut(s) 565, 836
SmoI CTYRAG 2 cut(s) 565, 836
SsiI CCGC 2 cut(s) 212, 686
SspMI CTAG 4 cut(s) 78, 111, 284, 1211
StyD4I CCNGG 4 cut(s) 220, 1009, 1309, 1370
TaaI ACNGT 3 cut(s) 39, 831, 1268
TaiI ACGT 4 cut(s) 128, 173, 338, 591
TaqI TCGA 6 cut(s) 98, 229, 506, 823, 837, 1497
TatI WGTACW 1 cut(s) 753
TfiI GAWTC 2 cut(s) 386, 620
Tru1I TTAA 2 cut(s) 566, 882
Tru9I TTAA 2 cut(s) 566, 882
TscAI CASTG 2 cut(s) 42, 1046
TseFI GTSAC 1 cut(s) 932
TseI GCWGC 4 cut(s) 683, 788, 914, 1123
Tsp45I GTSAC 1 cut(s) 932
TspDTI ATGAA 1 cut(s) 1044
TspGWI ACGGA 2 cut(s) 332, 663
TspRI CASTG 2 cut(s) 42, 1046
Van91I CCANNNNNTGG 1 cut(s) 240
Vha464I CTTAAG 1 cut(s) 565
VpaK11BI GGWCC 3 cut(s) 339, 421, 650
XapI RAATTY 4 cut(s) 850, 945, 1051, 1148
XceI RCATGY 1 cut(s) 1005
XhoI CTCGAG 1 cut(s) 836
XspI CTAG 4 cut(s) 78, 111, 284, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.