Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0007255

Physical Location & Seq

Genomic Coordinates Reverse (-)

51785698 .. 51789566

Gene Structure 3869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0413300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGAAGAACCCGAAGGAGGAGATCAGTTGTCTCCCATGTGGGTATTTCAGCCGCGGCGCGAAAGTCGAGGTGCGCGACGTACAAGGTGCATGGTTTCCTGCTCATGTCCTGGACCCAAATCCAAACCCGTCCCCATTCTCGCTTCGGAATCGGAAGCAGAAGTTGCTGGTGGTAGAGTATGAAACTCTCGTCTCCGACGACGACCCTTTGAAGCCGCTGACGGAGGAAATCGAGGTGGGTTTGCTCCGGCCTTCGCCGCCTGCGGAGGAGGAGGAGGGGTTTGAGGTAAACGACGTCGTTGACGCGTTTAATTTGGACGCGTGGTGGCCCGGGGTGGTGATGAGTGTTGTGGGGGACAAGTACACGGTGGGGTTTAAGAGCCCGCCGGATTTGCTGGAGCTTGGGAGCGGCGAGCTGCGGCGGCATTGGGATTGGCGCGGCGGCGAGTGGACTCGCGCCGGGAAGGAGATGATGATGCAATTGGATTTCAGCCCTGGGGAAGATGTTGAAGTGAACCTACACAGAGAACGTGTATGGTATGCTTGGATACCGGCAATTTATGTTGGTCCATTAGGGGGCAATTCTTTCCTGGTTCGTTATAAGGGTGCGAATAATGGTGATGAAAATGGTTTTGTTAAAGCTGTATCGGACTATCAGATTCGACCTCTCCCTCCGCAGCAAGAGGAAAGAGCTTTTGAATTGTTGGGAATGGTGGATGCATACCAAGATATGTGTTGGTGGGTTGGAGACATTACAAAAGTTCTTACAGAGGAAAGGTATGTTGTCACATTAAGATTCACAAAGCAGGAGAAGCAATTCAGATCGTCAGACCTGAGGCACCACTCAGAATGGATTGGTAGCAAATGGGTGTCTGACCCTAAGGCACTTGAAAATTCTATTGTCAATGAAGAACGATTAAGATATACAAGAAGCAATTACAGAAACTCCGAAGAAAAAACACCTTGTCATACTAAGTCTCAAATGAAGCAGTCGACTTGTCTTGTGAATAAATCACCTTACGGAAATACGAATAAGAAACTCAAATTATCTGAGCTTTCTAATGATGGTGCAACATTTTCAAGTCCAACTCCTTCAAAGAAGTTAAAAGGGGAACGCTCAGAGGACTCCATATCTCTGTTAGCATTATTTGGCAGGGAAAAATCAATTAAAACATCCAACAGAAAAGGGCCTTTTGAAGATGGAGAGAAGTCTGAGCAACAACATGTCGGGCAACTGGATGGTGAAGTAACCACTCCCGTAAAAAGAAGGGGTGGACGACGAAAATCACAAGCTGATAGCCCATCCCCTGGTGTTAGACAGGGTTCAAAGGCTAGACGACCAAAATTGCATGTTTCAGTCAAGAAGAGCAGTGGAATTGACAAAGTATATGAACAAAATCTTGAAGATGAGCATGTAATTAACGGAATTGAATCTTCTGGGATCAGTTCGGAGAATGAAGTAATGGGGGGATCAAAGGCTAGAAGCTCATGTCTGCTCCCTATGGAGGATAACCAACAACATAATGAAGATGGAACAAGCAGTGGAATAAAACTGAAGAGAAAACTGCCTATGTTGGTTGTTGAACACTCAAAAGATCCAACAACAGGTTCTGGAGATTCGGTGAGAGATGGCCGAGCTGTAGCTTCTGTAGAGAAAGTTAAGCTGGCTGTGTCTGGAATTCCTGCAAAGGAACCTGATCATGATCAATCTTTATTTATAAAGGAAGGGAATTCTGTAAAAACCGTGGAGGGATCAATTTTATATACTAACGTCATGTTTGGTTACCCTGCTGGAACTGCCAACCAACAAAATGAAGTAAGTGGAAGAAAAATTGAAACTGGAGTCAAAGGTGATGTGGAGCAAGAAGACAGTCCAAATTTGCCTTTTGTGAAAAGTATCCCACTATGGGAAAATATTGAATCCATGGAAGTATTCAAAAGATTTCCACAGAAGCCGCATTTTCATCCTGTACTGAAAACTAAAGAGGTGTTTCGTGAGGGATCGGCTTTCGGAAAAATGTTAGCCTTTAGCTCTTTGGTAGACCGGACCTCCAAGATACGGATTGGTGATCCTAGAAACGTCATTGATAGCAACTTGGAAGCGACAGTTGAATTGGAACTGCACGGCTTTGATGTTGATGCCATAAAGTGTCGTCTGACTGGGTTGCTAGACCTGAAAGCCAAGCTGGAGGAGCTTCAAAACCAGTCCAAAGTTGTTGAAACCAAGATCACGGCGTGTAGACAAAACACAATCAAGGACACTGAAACTATCAGTAGAATTGACAAGGAGATCAAGGACTTAGAAGCAAACATCAAGGGCTTGAAGAAAAAACGGGCCATGGTTGTGTCAATGTGTTCGGCCAAAGATTCCGAGCTTAGCAAGTTGCAGTCAGAAGCAAAAGTTATCAGTGAAGGCATTCAGAGCATCCAACATGGTTTCGACATACTAGCTGCTGCTCCATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

821

Amino Acids

91.84

Weight (kDa)

6.42

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Agenet	PF05641	19 - 87	4.2e-08	Agenet domain
Agenet	PF05641	166 - 225	5.9e-06	Agenet domain
DUF724	PF05266	627 - 820	1.5e-52	Protein of unknown function (DUF724)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24080 AT5G24080 AT5G24080
fragaria_vesca	FvH4_7g30670 FvH4_7g30670
malus_domestica	MD01G1211900.v1.1 MD07G1282400.v1.1
prunus_persica	Prupe.2G304500_v2.0.a1 Prupe.2G304500_v2.0.a1
pyrus_communis	pycom01g22230 pycom07g25630 pycom07g25640
rosa_chinensis	RchiOBHm_Chr1g0379601
rosa_laevigata	RLG00000026391
rosa_multiflora	Rmu_co8451749.1_g000001 Rmu_sc0011286.1_g000005
rosa_roxburghii	Rroxscaffold_4G00280050
rosa_rugosa	Rorug01G0413200 Rorug01G0413300 Rorug01G0413400
rosa_samantha	Rh1AG436400 Rh1BG393400 Rh1CG406200 Rh1DG424300
rosa_wichuraiana	Rw1G038100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	600, 1718
AatII	GACGTC	1 cut(s)	297
AccB1I	GGYRCC	1 cut(s)	837
AccB7I	CCANNNNNTGG	1 cut(s)	1307
AccBSI	CCGCTC	1 cut(s)	408
AccI	GTMKAC	3 cut(s)	992, 2040, 2239
AccII	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
AclWI	GGATC	6 cut(s)	1448, 1477, 1589, 1759, 2008, 2063
AcoI	YGGCCR	2 cut(s)	1630, 2358
AcsI	RAATTY	4 cut(s)	892, 1677, 1729, 1876
AcuI	CTGAAG	1 cut(s)	1574
AcyI	GRCGYC	1 cut(s)	294
AdeI	CACNNNGTG	1 cut(s)	2235
AfaI	GTAC	3 cut(s)	81, 362, 1971
AfiI	CCNNNNNNNGG	7 cut(s)	16, 575, 1307, 1504, 1604, 1906, 2058
AflIII	ACRYGT	4 cut(s)	303, 318, 529, 1222
AjnI	CCWGG	4 cut(s)	108, 493, 588, 1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1591, 1623
Alw26I	GTCTC	4 cut(s)	35, 196, 741, 981
AlwI	GGATC	6 cut(s)	1448, 1477, 1589, 1759, 2008, 2063
AlwNI	CAGNNNCTG	1 cut(s)	1610
Ama87I	CYCGRG	1 cut(s)	329
AoxI	GGCC	6 cut(s)	248, 326, 1187, 1630, 2334, 2358
ApeKI	GCWGC	4 cut(s)	415, 676, 2450, 2453
ApoI	RAATTY	4 cut(s)	892, 1677, 1729, 1876
Asp700I	GAANNNNTTC	2 cut(s)	815, 2415
AspLEI	GCGC	4 cut(s)	59, 75, 438, 458
AspS9I	GGNCC	6 cut(s)	112, 327, 566, 1187, 2046, 2334
AsuC2I	CCSGG	3 cut(s)	330, 331, 460
AsuHPI	GGTGA	7 cut(s)	349, 629, 1005, 1253, 1633, 1862, 2078
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	3 cut(s)	112, 566, 2046
AxyI	CCTNAGG	2 cut(s)	833, 879
BanI	GGYRCC	1 cut(s)	837
BanII	GRGCYC	1 cut(s)	383
BarI	GAAGNNNNNNTAC	2 cut(s)	501, 533
BbsI	GAAGAC	1 cut(s)	1872
BbvI	GCAGC	4 cut(s)	402, 688, 2437, 2440
BccI	CCATC	6 cut(s)	1058, 1193, 1232, 1309, 1523, 1622
BceAI	ACGGC	2 cut(s)	2140, 2247
BciT130I	CCWGG	4 cut(s)	110, 495, 590, 1308
BciVI	GTATCC	2 cut(s)	540, 1907
BclI	TGATCA	2 cut(s)	1696, 1702
BcnI	CCSGG	3 cut(s)	330, 331, 460
BcoDI	GTCTC	4 cut(s)	35, 196, 741, 981
BfaI	CTAG	5 cut(s)	1332, 1479, 2073, 2168, 2447
BfmI	CTRYAG	2 cut(s)	1638, 1647
BfuI	GTATCC	2 cut(s)	540, 1907
BlpI	GCTNAGC	1 cut(s)	2375
Bme1390I	CCNGG	7 cut(s)	110, 330, 331, 460, 495, 590, 1308
Bme18I	GGWCC	3 cut(s)	112, 566, 2046
BmeT110I	CYCGRG	1 cut(s)	329
BmgT120I	GGNCC	6 cut(s)	112, 327, 566, 1187, 2046, 2334
BmiI	GGNNCC	3 cut(s)	114, 839, 1692
BmrFI	CCNGG	7 cut(s)	110, 330, 331, 460, 495, 590, 1308
BmrI	ACTGGG	1 cut(s)	2169
BmsI	GCATC	4 cut(s)	465, 706, 2128, 2433
BmuI	ACTGGG	1 cut(s)	2169
BpiI	GAAGAC	1 cut(s)	1872
BpmI	CTGGAG	4 cut(s)	416, 1632, 1860, 2207
Bpu1102I	GCTNAGC	1 cut(s)	2375
BpuMI	CCSGG	3 cut(s)	330, 331, 460
BsaBI	GATNNNNATC	1 cut(s)	1701
BsaHI	GRCGYC	1 cut(s)	294
BsaJI	CCNNGG	9 cut(s)	52, 329, 330, 493, 494, 1306, 1743, 1923, 2337
BsaWI	WCCGGW	1 cut(s)	2043
BsaXI	ACNNNNNCTCC	8 cut(s)	263, 293, 929, 959, 1605, 1635, 2033, 2063
Bsc4I	CCNNNNNNNGG	7 cut(s)	16, 575, 1307, 1504, 1604, 1906, 2058
Bse118I	RCCGGY	1 cut(s)	550
Bse1I	ACTGG	4 cut(s)	1239, 1843, 2164, 2203
Bse21I	CCTNAGG	2 cut(s)	833, 879
Bse8I	GATNNNNATC	1 cut(s)	1701
BseBI	CCWGG	4 cut(s)	110, 495, 590, 1308
BseDI	CCNNGG	9 cut(s)	52, 329, 330, 493, 494, 1306, 1743, 1923, 2337
BseGI	GGATG	6 cut(s)	721, 1172, 1243, 1301, 1963, 2424
BseJI	GATNNNNATC	1 cut(s)	1701
BseLI	CCNNNNNNNGG	7 cut(s)	16, 575, 1307, 1504, 1604, 1906, 2058
BseMII	CTCAG	5 cut(s)	824, 858, 1041, 1131, 1203
BseNI	ACTGG	4 cut(s)	1239, 1843, 2164, 2203
BseRI	GAGGAG	5 cut(s)	32, 281, 284, 287, 2204
BseXI	GCAGC	4 cut(s)	402, 688, 2437, 2440
BsgI	GTGCAG	1 cut(s)	2105
Bsh1236I	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
BshFI	GGCC	6 cut(s)	250, 328, 1189, 1632, 2336, 2360
BshNI	GGYRCC	1 cut(s)	837
BsiHKCI	CYCGRG	1 cut(s)	329
BsiSI	CCGG	6 cut(s)	247, 330, 386, 459, 551, 2044
BslFI	GGGAC	2 cut(s)	115, 368
BslI	CCNNNNNNNGG	7 cut(s)	16, 575, 1307, 1504, 1604, 1906, 2058
BsmAI	GTCTC	4 cut(s)	35, 196, 741, 981
BsmBI	CGTCTC	1 cut(s)	196
BsmFI	GGGAC	2 cut(s)	115, 368
BsmI	GAATGC	1 cut(s)	2415
BsnI	GGCC	6 cut(s)	250, 328, 1189, 1632, 2336, 2360
BsoBI	CYCGRG	1 cut(s)	329
Bsp1286I	GDGCHC	1 cut(s)	383
Bsp1720I	GCTNAGC	1 cut(s)	2375
Bsp19I	CCATGG	2 cut(s)	1923, 2337
BspANI	GGCC	6 cut(s)	250, 328, 1189, 1632, 2336, 2360
BspCNI	CTCAG	5 cut(s)	825, 857, 1042, 1130, 1204
BspFNI	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
BspHI	TCATGA	1 cut(s)	1699
BspLI	GGNNCC	3 cut(s)	114, 839, 1692
BspPI	GGATC	6 cut(s)	1448, 1477, 1589, 1759, 2008, 2063
BspQI	GCTCTTC	1 cut(s)	1358
BspT107I	GGYRCC	1 cut(s)	837
BsrBI	CCGCTC	1 cut(s)	408
BsrFI	RCCGGY	1 cut(s)	550
BsrI	ACTGG	4 cut(s)	1239, 1843, 2164, 2203
BssAI	RCCGGY	1 cut(s)	550
BssECI	CCNNGG	9 cut(s)	52, 329, 330, 493, 494, 1306, 1743, 1923, 2337
BssNI	GRCGYC	1 cut(s)	294
BssT1I	CCWWGG	2 cut(s)	1923, 2337
Bst2UI	CCWGG	4 cut(s)	110, 495, 590, 1308
Bst4CI	ACNGT	4 cut(s)	367, 1744, 1871, 2107
Bst6I	CTCTTC	2 cut(s)	1358, 1550
BstACI	GRCGYC	1 cut(s)	294
BstAPI	GCANNNNNTGC	1 cut(s)	163
BstC8I	GCNNGC	4 cut(s)	261, 383, 413, 1665
BstDEI	CTNAG	9 cut(s)	833, 844, 879, 972, 1050, 1117, 1212, 2299, 2375
BstDSI	CCRYGG	4 cut(s)	52, 1743, 1923, 2337
BstEII	GGTNACC	1 cut(s)	1781
BstF5I	GGATG	6 cut(s)	721, 1172, 1243, 1301, 1963, 2424
BstFNI	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
BstHHI	GCGC	4 cut(s)	59, 75, 438, 458
BstMAI	GTCTC	4 cut(s)	35, 196, 741, 981
BstMWI	GCNNNNNNNGC	8 cut(s)	163, 256, 391, 421, 811, 1796, 2191, 2421
BstNI	CCWGG	4 cut(s)	110, 495, 590, 1308
BstNSI	RCATGY	3 cut(s)	1226, 1352, 1415
BstPI	GGTNACC	1 cut(s)	1781
BstSCI	CCNGG	7 cut(s)	108, 328, 329, 458, 493, 588, 1306
BstSFI	CTRYAG	2 cut(s)	1638, 1647
BstUI	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
BstV1I	GCAGC	4 cut(s)	402, 688, 2437, 2440
BstV2I	GAAGAC	1 cut(s)	1872
BstX2I	RGATCY	1 cut(s)	1594
BstYI	RGATCY	1 cut(s)	1594
Bsu36I	CCTNAGG	2 cut(s)	833, 879
BsuI	GTATCC	2 cut(s)	540, 1907
BsuRI	GGCC	6 cut(s)	250, 328, 1189, 1632, 2336, 2360
BtgI	CCRYGG	4 cut(s)	52, 1743, 1923, 2337
BtsCI	GGATG	6 cut(s)	721, 1172, 1243, 1301, 1963, 2424
BtsI	GCAGTG	2 cut(s)	1375, 1546
BtsIMutI	CAGTG	4 cut(s)	1375, 1546, 2259, 2413
Cac8I	GCNNGC	4 cut(s)	261, 383, 413, 1665
CaiI	CAGNNNCTG	1 cut(s)	1610
CciI	TCATGA	1 cut(s)	1699
CfoI	GCGC	4 cut(s)	59, 75, 438, 458
Cfr10I	RCCGGY	1 cut(s)	550
Cfr13I	GGNCC	6 cut(s)	112, 327, 566, 1187, 2046, 2334
Cfr42I	CCGCGG	1 cut(s)	55
Cfr9I	CCCGGG	1 cut(s)	329
CseI	GACGC	2 cut(s)	311, 326
Csp6I	GTAC	3 cut(s)	80, 361, 1970
CviQI	GTAC	3 cut(s)	80, 361, 1970
DdeI	CTNAG	9 cut(s)	833, 844, 879, 972, 1050, 1117, 1212, 2299, 2375
DraIII	CACNNNGTG	1 cut(s)	2235
EaeI	YGGCCR	2 cut(s)	1630, 2358
Eam1104I	CTCTTC	2 cut(s)	1358, 1550
EarI	CTCTTC	2 cut(s)	1358, 1550
Eco130I	CCWWGG	2 cut(s)	1923, 2337
Eco24I	GRGCYC	1 cut(s)	383
Eco47I	GGWCC	3 cut(s)	112, 566, 2046
Eco57I	CTGAAG	1 cut(s)	1574
Eco81I	CCTNAGG	2 cut(s)	833, 879
Eco88I	CYCGRG	1 cut(s)	329
Eco91I	GGTNACC	1 cut(s)	1781
EcoO109I	RGGNCCY	1 cut(s)	1187
EcoO65I	GGTNACC	1 cut(s)	1781
EcoRI	GAATTC	2 cut(s)	1677, 1729
EcoRII	CCWGG	4 cut(s)	108, 493, 588, 1306
EcoT14I	CCWWGG	2 cut(s)	1923, 2337
EcoT22I	ATGCAT	1 cut(s)	721
EcoT38I	GRGCYC	1 cut(s)	383
ErhI	CCWWGG	2 cut(s)	1923, 2337
Esp3I	CGTCTC	1 cut(s)	196
FaqI	GGGAC	2 cut(s)	115, 368
FauI	CCCGC	1 cut(s)	390
FbaI	TGATCA	2 cut(s)	1696, 1702
FblI	GTMKAC	3 cut(s)	992, 2040, 2239
FokI	GGATG	6 cut(s)	728, 1159, 1250, 1288, 1950, 2411
FriOI	GRGCYC	1 cut(s)	383
FspBI	CTAG	5 cut(s)	1332, 1479, 2073, 2168, 2447
GlaI	GCGC	4 cut(s)	58, 74, 437, 457
GsuI	CTGGAG	4 cut(s)	416, 1632, 1860, 2207
HaeIII	GGCC	6 cut(s)	250, 328, 1189, 1632, 2336, 2360
HapII	CCGG	6 cut(s)	247, 330, 386, 459, 551, 2044
HgaI	GACGC	2 cut(s)	311, 326
HhaI	GCGC	4 cut(s)	59, 75, 438, 458
Hin1I	GRCGYC	1 cut(s)	294
Hin6I	GCGC	4 cut(s)	57, 73, 436, 456
HinP1I	GCGC	4 cut(s)	57, 73, 436, 456
HincII	GTYRAC	2 cut(s)	301, 993
HindII	GTYRAC	2 cut(s)	301, 993
HpaII	CCGG	6 cut(s)	247, 330, 386, 459, 551, 2044
HphI	GGTGA	7 cut(s)	349, 629, 1005, 1253, 1633, 1862, 2078
Hpy166II	GTNNAC	9 cut(s)	289, 301, 363, 450, 514, 993, 1274, 2041, 2240
Hpy188III	TCNNGA	6 cut(s)	1360, 1400, 1611, 1674, 1700, 1994
Hpy8I	GTNNAC	9 cut(s)	289, 301, 363, 450, 514, 993, 1274, 2041, 2240
Hpy99I	CGWCG	6 cut(s)	80, 200, 203, 296, 299, 1281
HpyAV	CCTTC	7 cut(s)	7, 261, 457, 1101, 1260, 1718, 2405
HpyCH4III	ACNGT	4 cut(s)	367, 1744, 1871, 2107
HpyCH4IV	ACGT	5 cut(s)	78, 294, 529, 1770, 2079
HpyCH4V	TGCA	8 cut(s)	89, 478, 719, 1070, 1348, 1685, 2122, 2386
HpyF10VI	GCNNNNNNNGC	8 cut(s)	163, 256, 391, 421, 811, 1796, 2191, 2421
HpyF3I	CTNAG	9 cut(s)	833, 844, 879, 972, 1050, 1117, 1212, 2299, 2375
HpySE526I	ACGT	5 cut(s)	78, 294, 529, 1770, 2079
Hsp92I	GRCGYC	1 cut(s)	294
HspAI	GCGC	4 cut(s)	57, 73, 436, 456
Ksp22I	TGATCA	2 cut(s)	1696, 1702
KspI	CCGCGG	1 cut(s)	55
LguI	GCTCTTC	1 cut(s)	1358
LmnI	GCTCC	7 cut(s)	249, 397, 405, 1500, 1858, 2191, 2461
Lsp1109I	GCAGC	4 cut(s)	402, 688, 2437, 2440
LweI	GCATC	4 cut(s)	465, 706, 2128, 2433
MaeI	CTAG	5 cut(s)	1332, 1479, 2073, 2168, 2447
MaeII	ACGT	5 cut(s)	78, 294, 529, 1770, 2079
MaeIII	GTNAC	3 cut(s)	784, 1246, 1781
MbiI	CCGCTC	1 cut(s)	408
MfeI	CAATTG	1 cut(s)	479
MflI	RGATCY	1 cut(s)	1594
MhlI	GDGCHC	1 cut(s)	383
MluI	ACGCGT	2 cut(s)	303, 318
MlyI	GAGTC	3 cut(s)	445, 1118, 1851
MmeI	TCCRAC	6 cut(s)	219, 724, 1109, 1200, 1622, 2452
Mph1103I	ATGCAT	1 cut(s)	721
MroXI	GAANNNNTTC	2 cut(s)	815, 2415
MseI	TTAA	9 cut(s)	309, 375, 636, 791, 917, 1103, 1167, 1419, 1659
MslI	CAYNNNNRTG	1 cut(s)	2342
MspA1I	CMGCKG	2 cut(s)	54, 217
MspI	CCGG	6 cut(s)	247, 330, 386, 459, 551, 2044
MspR9I	CCNGG	7 cut(s)	110, 330, 331, 460, 495, 590, 1308
MunI	CAATTG	1 cut(s)	479
Mva1269I	GAATGC	1 cut(s)	2415
MvaI	CCWGG	4 cut(s)	110, 495, 590, 1308
MvnI	CGCG	7 cut(s)	54, 59, 75, 305, 320, 438, 456
MwoI	GCNNNNNNNGC	8 cut(s)	163, 256, 391, 421, 811, 1796, 2191, 2421
NciI	CCSGG	3 cut(s)	330, 331, 460
NcoI	CCATGG	2 cut(s)	1923, 2337
NlaIV	GGNNCC	3 cut(s)	114, 839, 1692
NmeAIII	GCCGAG	1 cut(s)	1658
NmuCI	GTSAC	1 cut(s)	784
NsiI	ATGCAT	1 cut(s)	721
NspI	RCATGY	3 cut(s)	1226, 1352, 1415
PagI	TCATGA	1 cut(s)	1699
PasI	CCCWGGG	1 cut(s)	494
PciI	ACATGT	1 cut(s)	1222
PciSI	GCTCTTC	1 cut(s)	1358
PcsI	WCGNNNNNNNCGW	2 cut(s)	72, 195
PctI	GAATGC	1 cut(s)	2415
PdmI	GAANNNNTTC	2 cut(s)	815, 2415
PfeI	GAWTC	7 cut(s)	148, 658, 795, 1430, 1616, 1919, 2366
PflMI	CCANNNNNTGG	1 cut(s)	1307
PfoI	TCCNGGA	1 cut(s)	108
PleI	GAGTC	3 cut(s)	445, 1118, 1850
PpsI	GAGTC	3 cut(s)	445, 1118, 1850
PscI	ACATGT	1 cut(s)	1222
PsiI	TTATAA	2 cut(s)	600, 1718
Psp6I	CCWGG	4 cut(s)	108, 493, 588, 1306
PspEI	GGTNACC	1 cut(s)	1781
PspGI	CCWGG	4 cut(s)	108, 493, 588, 1306
PspN4I	GGNNCC	3 cut(s)	114, 839, 1692
PspPI	GGNCC	6 cut(s)	112, 327, 566, 1187, 2046, 2334
PstNI	CAGNNNCTG	1 cut(s)	1610
PsuI	RGATCY	1 cut(s)	1594
RsaI	GTAC	3 cut(s)	81, 362, 1971
RsaNI	GTAC	3 cut(s)	80, 361, 1970
RseI	CAYNNNNRTG	1 cut(s)	2342
SacII	CCGCGG	1 cut(s)	55
SalI	GTCGAC	1 cut(s)	991
SapI	GCTCTTC	1 cut(s)	1358
SaqAI	TTAA	9 cut(s)	309, 375, 636, 791, 917, 1103, 1167, 1419, 1659
Sau96I	GGNCC	6 cut(s)	112, 327, 566, 1187, 2046, 2334
SchI	GAGTC	3 cut(s)	445, 1118, 1851
ScrFI	CCNGG	7 cut(s)	110, 330, 331, 460, 495, 590, 1308
SduI	GDGCHC	1 cut(s)	383
SfaNI	GCATC	4 cut(s)	465, 706, 2128, 2433
SfcI	CTRYAG	2 cut(s)	1638, 1647
Sfr303I	CCGCGG	1 cut(s)	55
SgrBI	CCGCGG	1 cut(s)	55
SinI	GGWCC	3 cut(s)	112, 566, 2046
SmaI	CCCGGG	1 cut(s)	331
SmiMI	CAYNNNNRTG	1 cut(s)	2342
SspI	AATATT	1 cut(s)	1915
SspMI	CTAG	5 cut(s)	1332, 1479, 2073, 2168, 2447
StyD4I	CCNGG	7 cut(s)	108, 328, 329, 458, 493, 588, 1306
StyI	CCWWGG	2 cut(s)	1923, 2337
TaaI	ACNGT	4 cut(s)	367, 1744, 1871, 2107
TaiI	ACGT	5 cut(s)	81, 297, 532, 1773, 2082
TaqI	TCGA	5 cut(s)	66, 231, 661, 992, 2439
TatI	WGTACW	2 cut(s)	360, 1969
TfiI	GAWTC	7 cut(s)	148, 658, 795, 1430, 1616, 1919, 2366
Tru1I	TTAA	9 cut(s)	309, 375, 636, 791, 917, 1103, 1167, 1419, 1659
Tru9I	TTAA	9 cut(s)	309, 375, 636, 791, 917, 1103, 1167, 1419, 1659
TscAI	CASTG	4 cut(s)	1375, 1546, 2266, 2413
TseFI	GTSAC	1 cut(s)	784
TseI	GCWGC	4 cut(s)	415, 676, 2450, 2453
Tsp45I	GTSAC	1 cut(s)	784
TspGWI	ACGGA	4 cut(s)	236, 1035, 1437, 2074
TspMI	CCCGGG	1 cut(s)	329
TspRI	CASTG	4 cut(s)	1375, 1546, 2266, 2413
Van91I	CCANNNNNTGG	1 cut(s)	1307
VpaK11BI	GGWCC	3 cut(s)	112, 566, 2046
XapI	RAATTY	4 cut(s)	892, 1677, 1729, 1876
XceI	RCATGY	3 cut(s)	1226, 1352, 1415
XmaI	CCCGGG	1 cut(s)	329
XmiI	GTMKAC	3 cut(s)	992, 2040, 2239
XmnI	GAANNNNTTC	2 cut(s)	815, 2415
XspI	CTAG	5 cut(s)	1332, 1479, 2073, 2168, 2447
ZraI	GACGTC	1 cut(s)	295
Zsp2I	ATGCAT	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.