Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007255

Physical Location & Seq

Genomic Coordinates Forward (+)

65731499 .. 65735120

Gene Structure 3622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G038100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGGCCTCTAGTAGTTACTTGGTGTTGTTCTTCTTCTTGGTTCTAGCTGGGTTTGGTGCCTGCATGGCTAACCAGATTAGTTTGGACGTGGTTTCTGATAATGGTACATTTGCACTTGGGTTCAGTCCAATGGATGAAGAGAACAGATATCAACTGGCAATTTGGTTTGCAGAGCTTCCAGGAGACAGAACCATAGTATGGTCTGCTAATAGAAATTCTGCTGTCACCAACAATGCAATCCTGGAGCTAGAGACCACCGGAAACCTTGTTCTCATGGATGGTGATGCTACTATTTGGACCTCCAACACTTCAGGCACCAGCGTTGAATTTGCATCCCTATTAGAATCTGGAAACTTCATCTTATACAATGAAGCCAACCGCCCTATGTGGCAGAGTTTCTCACATCCATCTGATACTCTCCTCCCAAACCAGCCTCTTTCGGTCTCTTTAGAGCTCACAACAGCTAAGTCACCCTCTCATGGTGGCTATTATGCTCTCAAAATGCTTCAGCAGCGCACTTCGTTAAGCCTTGCATTGACTTATAATATGCCAGAAAGTACTTACAATACCTCACCAGAATCTTACTATAACAACTCTTACTGGACTGGACCGGAGATATCAAATGTGACAGGAGATGTCATAGCGGTTTTGGATGAAGCAGGAAGCTTTGGAATTGTGTACGGTGAATCTTCAGATGGAGCTGTATATGTGTACAAGAATGATGGTGATGATGGAGTACTATCAGCAGCCTCTAACAAATCAAACAGATTGTCAGTTCTTCGGAGATTGACACTCGAAACTAATGGAAATTTGCGTTTGTATCGTTGGGATGATGATGTCAATGGGTCAAGGCAATGGGTGTCAGAGTGGGCTGCAGTTTCAACACCATGTGACATTTCTGGAATTTGTGGTAATGGAATTTGTACTTTAGATAGGACCAAGGCCAATGCTTCTTGCTCATGTCTGCCAGGGACTTATAAGGTGAATAGTGGAGGTCAATGTGATTCGAAGCAGGATTATCAACCTTCACAGTTTAGAATGTCCACGGTGCAGCAAACCAATTACTATTTGCCAAAATTTTCAGTCATAGCAAATTATAGTGACATTGAAAATGTATCAAAATGTGGAGATGTTTGCTTAGCTGATTGTGAATGTGTTGCTTCAGTTTACGGGCTTGATGATGAAAATGCTTACTGTTGGGTTTTGAGGAGCATGGAGTTTGGTGGCTTTCAGGACCCTGGCTCAACCTTGTTTGTCAAAATTAGGTCCAATGGCTCGGTGGTACCAGAGGGAGATACAAGAGGATCCGGGGATTCATCAGATGGGTCTAGTAGTAACAGAGAAAAGGTTTTGGTTATACCTATTGTTCTGAGCATGACTGTTCTTATAGCCCTCCTATGTCTCTTACTATATTACAATGTGCATAAGAGGAGATCCTTCAAGAGAGCCATGGAGAAGTCTTTAATCTTGTCTGGTGCTCCAATGAATTTTAGTTACCGTGATTTACAAGTTCGTACCTGGAATTTTTCACAGCTGCTTGGAACTGGGGGCTTTGGGAGTGTGTACAAGGGAAGCCTTGCAGATGGTACTTTGGTTGCAGTTAAAAAACTTGAAAGGGTTTTGCCCCATGGGGAGAAGGAGTTTATAACTGAAGTCAACACCATTGGCTCTATGCATCACATGAACTTGGTTCGGCTATGTGGCTACTGCTCCGAAGCTTCACAACGGCTTTTGGTTTATGAATTCATGAAAAATGGGTCATTGGACAAATGGATATTTCCCTCAAAATATTCTGGACATAGGTTGCTGGACTGGGAAACTCGCTTTAACATAGCAGTGGGAACTGCACAAGGGATTGCATATTTTCATGAGCAATGTCGAGATCGAATAATACACTGTGACATCAAGCCGGAAAATATTCTTATAGATGAAAATTTCTGTCCTAAAGTGTCTGACTTTGGACTAGCTAAGATGATGGGAAGAGAGCACTCACAGGTTGTTACCATGGTCAGAGGAACTAGAGGCTATTTGGCTCCAGAGTGGGTGAGTAACCGGCCTATAACTGTCAAGGCTGATGTTTATAGCTATGGCATGCTTCTCCTAGAGATCGTTGGTGGTCGAAGAAACCTTGACATGTCTTTTGATGTTGATGACTTCTTCTATCCTGGATGGGCTTTTAAGGAGATGACAAGTGGAGAGCCACTGAAAGTTGCAGATAGGAGACTAGAAGGAGCAGTGGAAGAAGAAGAACTCATAAGAGCCTTGCAAACCGCATTTTGGTGCATACAAGATGAGGTTTTCATGAGACCTACAATGGGGGAAGTGGTGAGGATGCTGGAAGGATCGGTCGAAATCAACATGCCACCAATGCCCCAGACAGTTTTGGAGTTAATTGATGAAGGCTTAGATCATGTGTACAGAGCCATGAGGAGAGAGTTCAACAACCACTTCAGCTCATTCACCATCAACACCCACCATTCATCTCAAGCTACATGCAGTTATTCCACAGTGTCCCCTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

B_lectin Pkinase S_locus_glycop

Protein Analysis

840

Amino Acids

93.55

Weight (kDa)

5.11

Isoelectric Point (pI)

35.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	64 - 151	1.5e-19	D-mannose binding lectin
S_locus_glycop	PF00954	251 - 324	1.4e-08	S-locus glycoprotein domain
Pkinase	PF00069	508 - 709	5e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	509 - 777	3.5e-39	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007255)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24080 AT5G24080 AT5G24080
fragaria_vesca	FvH4_7g30670 FvH4_7g30670
malus_domestica	MD01G1211900.v1.1 MD07G1282400.v1.1
prunus_persica	Prupe.2G304500_v2.0.a1 Prupe.2G304500_v2.0.a1
pyrus_communis	pycom01g22230 pycom07g25630 pycom07g25640
rosa_chinensis	RchiOBHm_Chr1g0379601
rosa_laevigata	RLG00000026391
rosa_multiflora	Rmu_co8451749.1_g000001 Rmu_sc0011286.1_g000005
rosa_roxburghii	Rroxscaffold_4G00280050
rosa_rugosa	Rorug01G0413200 Rorug01G0413300 Rorug01G0413400
rosa_samantha	Rh1AG436400 Rh1BG393400 Rh1CG406200 Rh1DG424300
rosa_wichuraiana	Rw1G038100

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	543, 978, 1646
Acc65I	GGTACC	1 cut(s)	1282
AccB1I	GGYRCC	3 cut(s)	56, 314, 1282
AccB7I	CCANNNNNTGG	1 cut(s)	198
AciI	CCGC	3 cut(s)	379, 644, 2271
AclWI	GGATC	4 cut(s)	1299, 1312, 1428, 2350
AcuI	CTGAAG	6 cut(s)	294, 491, 675, 1146, 1671, 2434
AdeI	CACNNNGTG	1 cut(s)	890
AfiI	CCNNNNNNNGG	4 cut(s)	198, 479, 2277, 2315
AflIII	ACRYGT	1 cut(s)	2133
AgsI	TTSAA	6 cut(s)	326, 882, 1109, 1441, 1613, 2440
AjiI	CACGTC	1 cut(s)	88
AjnI	CCWGG	6 cut(s)	178, 240, 967, 1237, 1517, 2164
AloI	GAACNNNNNNTCC	2 cut(s)	252, 284
Alw21I	GWGCWC	3 cut(s)	456, 1480, 1989
Alw26I	GTCTC	6 cut(s)	177, 245, 448, 1406, 2215, 2299
AlwI	GGATC	4 cut(s)	1299, 1312, 1428, 2350
AoxI	GGCC	3 cut(s)	3, 942, 2054
ApeKI	GCWGC	5 cut(s)	511, 746, 872, 1051, 1534
ArsI	GACNNNNNNTTYG	4 cut(s)	755, 787, 2123, 2155
Asp700I	GAANNNNTTC	1 cut(s)	1917
Asp718I	GGTACC	1 cut(s)	1282
AspLEI	GCGC	1 cut(s)	516
AspS9I	GGNCC	5 cut(s)	297, 608, 936, 1234, 1266
AsuC2I	CCSGG	1 cut(s)	1309
AsuII	TTCGAA	1 cut(s)	1007
AvaII	GGWCC	5 cut(s)	297, 608, 936, 1234, 1266
BaeI	ACNNNNGTAYC	2 cut(s)	1578, 1611
BamHI	GGATCC	1 cut(s)	1304
BanI	GGYRCC	3 cut(s)	56, 314, 1282
BanII	GRGCYC	1 cut(s)	456
Bbv12I	GWGCWC	3 cut(s)	456, 1480, 1989
BbvI	GCAGC	5 cut(s)	523, 758, 859, 1063, 1521
BceAI	ACGGC	1 cut(s)	1742
BciT130I	CCWGG	6 cut(s)	180, 242, 969, 1239, 1519, 2166
BcnI	CCSGG	1 cut(s)	1309
BcoDI	GTCTC	6 cut(s)	177, 245, 448, 1406, 2215, 2299
BfaI	CTAG	9 cut(s)	9, 44, 248, 1329, 1964, 2019, 2102, 2225, 2517
BfmI	CTRYAG	1 cut(s)	873
BglI	GCCNNNNNGGC	1 cut(s)	65
BisI	GCNGC	5 cut(s)	512, 747, 873, 1052, 1535
BlpI	GCTNAGC	1 cut(s)	1138
BlsI	GCNGC	5 cut(s)	513, 748, 874, 1053, 1536
BmcAI	AGTACT	2 cut(s)	559, 738
Bme1390I	CCNGG	7 cut(s)	180, 242, 969, 1239, 1309, 1519, 2166
Bme18I	GGWCC	5 cut(s)	297, 608, 936, 1234, 1266
BmgBI	CACGTC	1 cut(s)	88
BmgT120I	GGNCC	5 cut(s)	297, 608, 936, 1234, 1266
BmiI	GGNNCC	6 cut(s)	58, 316, 1236, 1284, 1306, 2034
BmrFI	CCNGG	7 cut(s)	180, 242, 969, 1239, 1309, 1519, 2166
BmrI	ACTGGG	2 cut(s)	1554, 1822
BmsI	GCATC	4 cut(s)	274, 341, 1684, 2322
BmuI	ACTGGG	2 cut(s)	1554, 1822
BpmI	CTGGAG	2 cut(s)	263, 2019
Bpu1102I	GCTNAGC	1 cut(s)	1138
Bpu14I	TTCGAA	1 cut(s)	1007
BpuEI	CTTGAG	1 cut(s)	2469
BpuMI	CCSGG	1 cut(s)	1309
BsaI	GGTCTC	3 cut(s)	245, 448, 2299
BsaJI	CCNNGG	8 cut(s)	939, 968, 1044, 1237, 1308, 1449, 1627, 2004
BsaWI	WCCGGW	2 cut(s)	257, 610
BsaXI	ACNNNNNCTCC	2 cut(s)	1625, 1655
Bsc4I	CCNNNNNNNGG	4 cut(s)	198, 479, 2277, 2315
Bse118I	RCCGGY	1 cut(s)	2052
Bse1I	ACTGG	5 cut(s)	159, 605, 610, 1549, 1817
Bse3DI	GCAATG	2 cut(s)	860, 1880
BseBI	CCWGG	6 cut(s)	180, 242, 969, 1239, 1519, 2166
BseDI	CCNNGG	8 cut(s)	939, 968, 1044, 1237, 1308, 1449, 1627, 2004
BseGI	GGATG	8 cut(s)	139, 283, 332, 403, 658, 835, 2174, 2337
BseLI	CCNNNNNNNGG	4 cut(s)	198, 479, 2277, 2315
BseMI	GCAATG	2 cut(s)	860, 1880
BseMII	CTCAG	1 cut(s)	1361
BseNI	ACTGG	5 cut(s)	159, 605, 610, 1549, 1817
BseRI	GAGGAG	4 cut(s)	410, 1222, 1444, 2443
BseXI	GCAGC	5 cut(s)	523, 758, 859, 1063, 1521
BseYI	CCCAGC	1 cut(s)	47
BsgI	GTGCAG	2 cut(s)	1070, 1830
Bsh1285I	CGRYCG	1 cut(s)	2349
BshFI	GGCC	3 cut(s)	5, 944, 2056
BshNI	GGYRCC	3 cut(s)	56, 314, 1282
BsiEI	CGRYCG	1 cut(s)	2349
BsiHKAI	GWGCWC	3 cut(s)	456, 1480, 1989
BsiSI	CCGG	5 cut(s)	258, 611, 1308, 1910, 2053
BslFI	GGGAC	2 cut(s)	985, 2497
BslI	CCNNNNNNNGG	4 cut(s)	198, 479, 2277, 2315
BsmAI	GTCTC	6 cut(s)	177, 245, 448, 1406, 2215, 2299
BsmFI	GGGAC	2 cut(s)	985, 2497
BsnI	GGCC	3 cut(s)	5, 944, 2056
Bso31I	GGTCTC	3 cut(s)	245, 448, 2299
Bsp119I	TTCGAA	1 cut(s)	1007
Bsp1286I	GDGCHC	3 cut(s)	456, 1480, 1989
Bsp1407I	TGTACA	3 cut(s)	711, 1563, 2415
Bsp143I	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
Bsp1720I	GCTNAGC	1 cut(s)	1138
Bsp19I	CCATGG	3 cut(s)	1449, 1627, 2004
BspACI	CCGC	3 cut(s)	379, 644, 2271
BspANI	GGCC	3 cut(s)	5, 944, 2056
BspCNI	CTCAG	1 cut(s)	1362
BspHI	TCATGA	3 cut(s)	1746, 1867, 2301
BspLI	GGNNCC	6 cut(s)	58, 316, 1236, 1284, 1306, 2034
BspMAI	CTGCAG	1 cut(s)	877
BspPI	GGATC	4 cut(s)	1299, 1312, 1428, 2350
BspT104I	TTCGAA	1 cut(s)	1007
BspT107I	GGYRCC	3 cut(s)	56, 314, 1282
BspTNI	GGTCTC	3 cut(s)	245, 448, 2299
BsrDI	GCAATG	2 cut(s)	860, 1880
BsrFI	RCCGGY	1 cut(s)	2052
BsrGI	TGTACA	3 cut(s)	711, 1563, 2415
BsrI	ACTGG	5 cut(s)	159, 605, 610, 1549, 1817
BssAI	RCCGGY	1 cut(s)	2052
BssECI	CCNNGG	8 cut(s)	939, 968, 1044, 1237, 1308, 1449, 1627, 2004
BssMI	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
BssT1I	CCWWGG	4 cut(s)	939, 1449, 1627, 2004
Bst2UI	CCWGG	6 cut(s)	180, 242, 969, 1239, 1519, 2166
Bst6I	CTCTTC	2 cut(s)	132, 1975
BstAUI	TGTACA	3 cut(s)	711, 1563, 2415
BstBI	TTCGAA	1 cut(s)	1007
BstC8I	GCNNGC	2 cut(s)	61, 2093
BstDEI	CTNAG	5 cut(s)	465, 1138, 1370, 1968, 2404
BstDSI	CCRYGG	4 cut(s)	1044, 1449, 1627, 2004
BstF5I	GGATG	8 cut(s)	139, 283, 332, 403, 658, 835, 2174, 2337
BstHHI	GCGC	1 cut(s)	516
BstKTI	GATC	6 cut(s)	1307, 1436, 1885, 2109, 2345, 2410
BstMAI	GTCTC	6 cut(s)	177, 245, 448, 1406, 2215, 2299
BstMBI	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
BstMCI	CGRYCG	1 cut(s)	2349
BstMWI	GCNNNNNNNGC	3 cut(s)	65, 511, 2368
BstNI	CCWGG	6 cut(s)	180, 242, 969, 1239, 1519, 2166
BstNSI	RCATGY	4 cut(s)	2095, 2137, 2362, 2496
BstSCI	CCNGG	7 cut(s)	178, 240, 967, 1237, 1307, 1517, 2164
BstSFI	CTRYAG	1 cut(s)	873
BstV1I	GCAGC	5 cut(s)	523, 758, 859, 1063, 1521
BstX2I	RGATCY	2 cut(s)	1304, 1433
BstYI	RGATCY	2 cut(s)	1304, 1433
BsuRI	GGCC	3 cut(s)	5, 944, 2056
BtgI	CCRYGG	4 cut(s)	1044, 1449, 1627, 2004
BtrI	CACGTC	1 cut(s)	88
BtsCI	GGATG	8 cut(s)	139, 283, 332, 403, 658, 835, 2174, 2337
BtsI	GCAGTG	2 cut(s)	1842, 2241
BtsIMutI	CAGTG	5 cut(s)	1842, 1894, 2201, 2241, 2514
Cac8I	GCNNGC	2 cut(s)	61, 2093
CciI	TCATGA	3 cut(s)	1746, 1867, 2301
CfoI	GCGC	1 cut(s)	516
Cfr10I	RCCGGY	1 cut(s)	2052
Cfr13I	GGNCC	5 cut(s)	297, 608, 936, 1234, 1266
DdeI	CTNAG	5 cut(s)	465, 1138, 1370, 1968, 2404
DpnI	GATC	6 cut(s)	1306, 1435, 1884, 2108, 2344, 2409
DpnII	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
DraIII	CACNNNGTG	1 cut(s)	890
Eam1104I	CTCTTC	2 cut(s)	132, 1975
EarI	CTCTTC	2 cut(s)	132, 1975
Ecl136II	GAGCTC	1 cut(s)	454
Eco130I	CCWWGG	4 cut(s)	939, 1449, 1627, 2004
Eco24I	GRGCYC	1 cut(s)	456
Eco31I	GGTCTC	3 cut(s)	245, 448, 2299
Eco32I	GATATC	2 cut(s)	149, 618
Eco47I	GGWCC	5 cut(s)	297, 608, 936, 1234, 1266
Eco53kI	GAGCTC	1 cut(s)	454
Eco57I	CTGAAG	6 cut(s)	294, 491, 675, 1146, 1671, 2434
EcoICRI	GAGCTC	1 cut(s)	454
EcoO109I	RGGNCCY	1 cut(s)	1234
EcoRI	GAATTC	1 cut(s)	1742
EcoRII	CCWGG	6 cut(s)	178, 240, 967, 1237, 1517, 2164
EcoRV	GATATC	2 cut(s)	149, 618
EcoT14I	CCWWGG	4 cut(s)	939, 1449, 1627, 2004
EcoT22I	ATGCAT	1 cut(s)	1677
EcoT38I	GRGCYC	1 cut(s)	456
ErhI	CCWWGG	4 cut(s)	939, 1449, 1627, 2004
FaqI	GGGAC	2 cut(s)	985, 2497
Fnu4HI	GCNGC	5 cut(s)	512, 747, 873, 1052, 1535
FokI	GGATG	8 cut(s)	146, 290, 319, 390, 665, 842, 2181, 2344
FriOI	GRGCYC	1 cut(s)	456
Fsp4HI	GCNGC	5 cut(s)	512, 747, 873, 1052, 1535
FspBI	CTAG	9 cut(s)	9, 44, 248, 1329, 1964, 2019, 2102, 2225, 2517
GlaI	GCGC	1 cut(s)	515
GluI	GCNGC	5 cut(s)	512, 747, 873, 1052, 1535
GsaI	CCCAGC	1 cut(s)	51
GsuI	CTGGAG	2 cut(s)	263, 2019
HaeIII	GGCC	3 cut(s)	5, 944, 2056
HapII	CCGG	5 cut(s)	258, 611, 1308, 1910, 2053
HhaI	GCGC	1 cut(s)	516
Hin6I	GCGC	1 cut(s)	514
HinP1I	GCGC	1 cut(s)	514
HincII	GTYRAC	1 cut(s)	1657
HindII	GTYRAC	1 cut(s)	1657
HindIII	AAGCTT	2 cut(s)	664, 1716
HinfI	GANTC	5 cut(s)	344, 578, 686, 1004, 1313
HpaII	CCGG	5 cut(s)	258, 611, 1308, 1910, 2053
Hpy166II	GTNNAC	7 cut(s)	679, 712, 1044, 1168, 1564, 1657, 2416
Hpy8I	GTNNAC	7 cut(s)	679, 712, 1044, 1168, 1564, 1657, 2416
HpyAV	CCTTC	6 cut(s)	1035, 1447, 1630, 2222, 2333, 2393
HpyCH4IV	ACGT	1 cut(s)	87
HpyF10VI	GCNNNNNNNGC	3 cut(s)	65, 511, 2368
HpyF3I	CTNAG	5 cut(s)	465, 1138, 1370, 1968, 2404
HpySE526I	ACGT	1 cut(s)	87
HspAI	GCGC	1 cut(s)	514
KpnI	GGTACC	1 cut(s)	1286
Kzo9I	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
LmnI	GCTCC	7 cut(s)	244, 698, 1209, 1483, 1715, 2038, 2231
Lsp1109I	GCAGC	5 cut(s)	523, 758, 859, 1063, 1521
LweI	GCATC	4 cut(s)	274, 341, 1684, 2322
MaeI	CTAG	9 cut(s)	9, 44, 248, 1329, 1964, 2019, 2102, 2225, 2517
MaeII	ACGT	1 cut(s)	87
MalI	GATC	6 cut(s)	1306, 1435, 1884, 2108, 2344, 2409
MboI	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
MflI	RGATCY	2 cut(s)	1304, 1433
MhlI	GDGCHC	3 cut(s)	456, 1480, 1989
MmeI	TCCRAC	1 cut(s)	327
Mph1103I	ATGCAT	1 cut(s)	1677
MroXI	GAANNNNTTC	1 cut(s)	1917
MseI	TTAA	6 cut(s)	524, 1463, 1602, 1827, 2178, 2390
MslI	CAYNNNNRTG	2 cut(s)	1835, 2278
MspA1I	CMGCKG	1 cut(s)	1534
MspI	CCGG	5 cut(s)	258, 611, 1308, 1910, 2053
MspR9I	CCNGG	7 cut(s)	180, 242, 969, 1239, 1309, 1519, 2166
MvaI	CCWGG	6 cut(s)	180, 242, 969, 1239, 1519, 2166
MwoI	GCNNNNNNNGC	3 cut(s)	65, 511, 2368
NciI	CCSGG	1 cut(s)	1309
NcoI	CCATGG	3 cut(s)	1449, 1627, 2004
NdeII	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
NlaIV	GGNNCC	6 cut(s)	58, 316, 1236, 1284, 1306, 2034
NmuCI	GTSAC	6 cut(s)	223, 468, 625, 890, 1100, 1898
NsiI	ATGCAT	1 cut(s)	1677
NspI	RCATGY	4 cut(s)	2095, 2137, 2362, 2496
NspV	TTCGAA	1 cut(s)	1007
PaeI	GCATGC	1 cut(s)	2095
PagI	TCATGA	3 cut(s)	1746, 1867, 2301
PciI	ACATGT	1 cut(s)	2133
PdmI	GAANNNNTTC	1 cut(s)	1917
PfeI	GAWTC	5 cut(s)	344, 578, 686, 1004, 1313
PflMI	CCANNNNNTGG	1 cut(s)	198
PfoI	TCCNGGA	3 cut(s)	178, 240, 2164
PkrI	GCNGC	5 cut(s)	513, 748, 874, 1053, 1536
PpuMI	RGGWCCY	1 cut(s)	1234
PscI	ACATGT	1 cut(s)	2133
PsiI	TTATAA	3 cut(s)	543, 978, 1646
Psp124BI	GAGCTC	1 cut(s)	456
Psp5II	RGGWCCY	1 cut(s)	1234
Psp6I	CCWGG	6 cut(s)	178, 240, 967, 1237, 1517, 2164
PspFI	CCCAGC	1 cut(s)	47
PspGI	CCWGG	6 cut(s)	178, 240, 967, 1237, 1517, 2164
PspN4I	GGNNCC	6 cut(s)	58, 316, 1236, 1284, 1306, 2034
PspPI	GGNCC	5 cut(s)	297, 608, 936, 1234, 1266
PspPPI	RGGWCCY	1 cut(s)	1234
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	2 cut(s)	1304, 1433
PvuII	CAGCTG	1 cut(s)	1534
RseI	CAYNNNNRTG	2 cut(s)	1835, 2278
SacI	GAGCTC	1 cut(s)	456
SaqAI	TTAA	6 cut(s)	524, 1463, 1602, 1827, 2178, 2390
SatI	GCNGC	5 cut(s)	512, 747, 873, 1052, 1535
Sau3AI	GATC	6 cut(s)	1304, 1433, 1882, 2106, 2342, 2407
Sau96I	GGNCC	5 cut(s)	297, 608, 936, 1234, 1266
ScaI	AGTACT	2 cut(s)	559, 738
ScrFI	CCNGG	7 cut(s)	180, 242, 969, 1239, 1309, 1519, 2166
SduI	GDGCHC	3 cut(s)	456, 1480, 1989
SfaNI	GCATC	4 cut(s)	274, 341, 1684, 2322
SfcI	CTRYAG	1 cut(s)	873
SfuI	TTCGAA	1 cut(s)	1007
SinI	GGWCC	5 cut(s)	297, 608, 936, 1234, 1266
SmiMI	CAYNNNNRTG	2 cut(s)	1835, 2278
SmlI	CTYRAG	1 cut(s)	2484
SmoI	CTYRAG	1 cut(s)	2484
SphI	GCATGC	1 cut(s)	2095
SsiI	CCGC	3 cut(s)	379, 644, 2271
SspI	AATATT	2 cut(s)	1790, 1918
SspMI	CTAG	9 cut(s)	9, 44, 248, 1329, 1964, 2019, 2102, 2225, 2517
SstI	GAGCTC	1 cut(s)	456
StyD4I	CCNGG	7 cut(s)	178, 240, 967, 1237, 1307, 1517, 2164
StyI	CCWWGG	4 cut(s)	939, 1449, 1627, 2004
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	6 cut(s)	795, 1007, 1879, 1885, 2119, 2349
TaqII	GACCGA	2 cut(s)	430, 2335
TatI	WGTACW	6 cut(s)	557, 711, 736, 923, 1563, 2415
TfiI	GAWTC	5 cut(s)	344, 578, 686, 1004, 1313
Tru1I	TTAA	6 cut(s)	524, 1463, 1602, 1827, 2178, 2390
Tru9I	TTAA	6 cut(s)	524, 1463, 1602, 1827, 2178, 2390
TscAI	CASTG	5 cut(s)	1842, 1901, 2208, 2241, 2514
TseFI	GTSAC	6 cut(s)	223, 468, 625, 890, 1100, 1898
TseI	GCWGC	5 cut(s)	511, 746, 872, 1051, 1534
Tsp45I	GTSAC	6 cut(s)	223, 468, 625, 890, 1100, 1898
TspRI	CASTG	5 cut(s)	1842, 1901, 2208, 2241, 2514
Van91I	CCANNNNNTGG	1 cut(s)	198
VpaK11BI	GGWCC	5 cut(s)	297, 608, 936, 1234, 1266
XceI	RCATGY	4 cut(s)	2095, 2137, 2362, 2496
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1276
XmnI	GAANNNNTTC	1 cut(s)	1917
XspI	CTAG	9 cut(s)	9, 44, 248, 1329, 1964, 2019, 2102, 2225, 2517
ZrmI	AGTACT	2 cut(s)	559, 738
Zsp2I	ATGCAT	1 cut(s)	1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.