pycom02g11630

Maf-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0009805
Physical Location & Seq
Reverse (-)
8210827 .. 8215044
4218 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 747 bp
ATGACTGAAGAGGAAGTGAAGAGGCAGTATGAGATCCTTCTAGCGGACATAAACCGCATTGAGTCAGGAAAAGTTCCCCTTCCCAAGTATAGGAAAGTTGGAGAAAGCAACATCAGCAGTGAAGAAGAGAGGTTCGTCGCTAAATCCCGAATAAATGACAATCCCATCGCCAATCTAGCTTCTACGGTTGGATTAGCTTGTGAAAATTTGCAGCAATTTCTGATCTTTTTTGCGACAGATAATTCTCGGGTCGGCGTCGGCGGCGCGCCGGCAAATACTGGCGGAGATGGGACACCGGTTCACGGTCATGATGCCATTATTTCAAGGCTCCAAAGTGATAGACAATTGGATGGGGATGCTCCTGCAACATTGTTGGTTACCGCAGACACGGTGGTGGTGTATGAAGGGATAGTAAGGGAAAAACCATCCAGCAAGGAAGAAGCATGGAATTTTATCAAAGGCTATTCCGGCGGTCAAGCAGAAGTTATAGGATCTGTACTTGTAACCAACCTTAAAACCGGAAAAAGAAAGGGCGGTTGGCGCAGAGCGGAGGTTTATTTTCATGTCATACCAGAGGAGGTTATCCATAGCCTGATAGAGGAGGGAATTACACTCAATGTTGCTGGCGGTTTGATGCTGGAACATCCATTGATTTCTCCGTTTGTAGAAGCAGTGATAGGGACGACTGACACGGTTATGGGATTGCCTAAAGAACTTACAGAGAAACTCATTCAGGAAGCAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Maf

Protein Analysis

249

Amino Acids

26.94

Weight (kDa)

5.08

Isoelectric Point (pI)

45.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Maf PF02545 120 - 246 5.9e-24 Maf-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009805)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G25500 AT5G66550 AT5G66550 AT5G66550 AT5G66550
fragaria_vesca FvH4_1g13260 FvH4_1g13260
malus_domestica MD02G1147000.v1.1
prunus_persica Prupe.7G155200_v2.0.a1
pyrus_communis pycom02g11630
rosa_chinensis RchiOBHm_Chr2g0101501
rosa_laevigata RLG00000017083
rosa_multiflora Rmu_sc0006153.1_g000022
rosa_roxburghii Rroxscaffold_2G00141290
rosa_rugosa Rorug02G0098000 Rorug02G0098100
rosa_samantha Rh2AG147400 Rh2BG152600 Rh2CG153400 Rh2DG152800
rosa_wichuraiana Rw2G011480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 548
AccII CGCG 1 cut(s) 266
AciI CCGC 9 cut(s) 44, 55, 261, 282, 381, 471, 534, 548, 627
AclWI GGATC 2 cut(s) 28, 499
AcsI RAATTY 2 cut(s) 205, 448
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 255
AfaI GTAC 1 cut(s) 498
AfiI CCNNNNNNNGG 4 cut(s) 43, 90, 302, 598
AgeI ACCGGT 1 cut(s) 295
AgsI TTSAA 1 cut(s) 324
AjuI GAANNNNNNNTTGG 2 cut(s) 520, 552
AleI CACNNNNGTG 1 cut(s) 392
AluBI AGCT 2 cut(s) 179, 197
AluI AGCT 2 cut(s) 179, 197
AlwI GGATC 2 cut(s) 28, 499
Ama87I CYCGRG 1 cut(s) 246
ApeKI GCWGC 1 cut(s) 211
ApoI RAATTY 2 cut(s) 205, 448
AscI GGCGCGCC 1 cut(s) 264
AsiGI ACCGGT 1 cut(s) 295
AspLEI GCGC 3 cut(s) 266, 268, 543
AvaI CYCGRG 1 cut(s) 246
BbvI GCAGC 1 cut(s) 223
BccI CCATC 4 cut(s) 173, 281, 344, 433
BfaI CTAG 2 cut(s) 41, 176
BisI GCNGC 2 cut(s) 212, 262
BlsI GCNGC 2 cut(s) 213, 263
BmeT110I CYCGRG 1 cut(s) 246
BmiI GGNNCC 1 cut(s) 329
BmsI GCATC 3 cut(s) 301, 346, 624
BsaHI GRCGYC 1 cut(s) 255
BsaWI WCCGGW 2 cut(s) 295, 518
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 90, 302, 598
Bse118I RCCGGY 2 cut(s) 268, 295
Bse1I ACTGG 1 cut(s) 283
BseGI GGATG 4 cut(s) 355, 361, 425, 643
BseLI CCNNNNNNNGG 4 cut(s) 43, 90, 302, 598
BseNI ACTGG 1 cut(s) 283
BsePI GCGCGC 1 cut(s) 264
BseRI GAGGAG 2 cut(s) 590, 614
BseXI GCAGC 1 cut(s) 223
Bsh1236I CGCG 1 cut(s) 266
BshTI ACCGGT 1 cut(s) 295
BsiHKCI CYCGRG 1 cut(s) 246
BsiSI CCGG 4 cut(s) 269, 296, 468, 519
BslFI GGGAC 2 cut(s) 304, 694
BslI CCNNNNNNNGG 4 cut(s) 43, 90, 302, 598
BsmFI GGGAC 2 cut(s) 304, 694
BsoBI CYCGRG 1 cut(s) 246
Bsp143I GATC 3 cut(s) 33, 222, 491
BspACI CCGC 9 cut(s) 44, 55, 261, 282, 381, 471, 534, 548, 627
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 1 cut(s) 307
BspLI GGNNCC 1 cut(s) 329
BspPI GGATC 2 cut(s) 28, 499
BsrBI CCGCTC 1 cut(s) 548
BsrFI RCCGGY 2 cut(s) 268, 295
BsrI ACTGG 1 cut(s) 283
BssAI RCCGGY 2 cut(s) 268, 295
BssHII GCGCGC 1 cut(s) 264
BssMI GATC 3 cut(s) 33, 222, 491
BssNI GRCGYC 1 cut(s) 255
Bst4CI ACNGT 4 cut(s) 187, 305, 391, 694
Bst6I CTCTTC 3 cut(s) 3, 14, 120
BstACI GRCGYC 1 cut(s) 255
BstC8I GCNNGC 3 cut(s) 266, 270, 625
BstEII GGTNACC 1 cut(s) 376
BstENI CCTNNNNNAGG 1 cut(s) 596
BstF5I GGATG 4 cut(s) 355, 361, 425, 643
BstFNI CGCG 1 cut(s) 266
BstHHI GCGC 3 cut(s) 266, 268, 543
BstKTI GATC 3 cut(s) 36, 225, 494
BstMBI GATC 3 cut(s) 33, 222, 491
BstMWI GCNNNNNNNGC 5 cut(s) 114, 176, 261, 468, 540
BstPI GGTNACC 1 cut(s) 376
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 1 cut(s) 223
BstX2I RGATCY 2 cut(s) 33, 491
BstYI RGATCY 2 cut(s) 33, 491
BtgZI GCGATG 1 cut(s) 151
BtsCI GGATG 4 cut(s) 355, 361, 425, 643
BtsI GCAGTG 2 cut(s) 124, 678
BtsIMutI CAGTG 2 cut(s) 124, 678
Cac8I GCNNGC 3 cut(s) 266, 270, 625
CciI TCATGA 1 cut(s) 307
CfoI GCGC 3 cut(s) 266, 268, 543
Cfr10I RCCGGY 2 cut(s) 268, 295
CseI GACGC 1 cut(s) 244
Csp6I GTAC 1 cut(s) 497
CspAI ACCGGT 1 cut(s) 295
CviAII CATG 3 cut(s) 308, 444, 563
CviJI RGCY 5 cut(s) 179, 197, 328, 462, 591
CviKI_1 RGCY 5 cut(s) 179, 197, 328, 462, 591
CviQI GTAC 1 cut(s) 497
DpnI GATC 3 cut(s) 35, 224, 493
DpnII GATC 3 cut(s) 33, 222, 491
Eam1104I CTCTTC 3 cut(s) 3, 14, 120
EarI CTCTTC 3 cut(s) 3, 14, 120
EciI GGCGGA 1 cut(s) 297
Eco57I CTGAAG 1 cut(s) 27
Eco88I CYCGRG 1 cut(s) 246
Eco91I GGTNACC 1 cut(s) 376
EcoNI CCTNNNNNAGG 1 cut(s) 596
EcoO65I GGTNACC 1 cut(s) 376
FaeI CATG 3 cut(s) 311, 447, 566
FalI AAGNNNNNCTT 2 cut(s) 63, 95
FaqI GGGAC 2 cut(s) 304, 694
FatI CATG 3 cut(s) 307, 443, 562
Fnu4HI GCNGC 2 cut(s) 212, 262
FokI GGATG 4 cut(s) 362, 368, 412, 630
Fsp4HI GCNGC 2 cut(s) 212, 262
FspBI CTAG 2 cut(s) 41, 176
GlaI GCGC 3 cut(s) 265, 267, 542
GluI GCNGC 2 cut(s) 212, 262
HapII CCGG 4 cut(s) 269, 296, 468, 519
HgaI GACGC 1 cut(s) 244
HhaI GCGC 3 cut(s) 266, 268, 543
Hin1I GRCGYC 1 cut(s) 255
Hin1II CATG 3 cut(s) 311, 447, 566
Hin6I GCGC 3 cut(s) 264, 266, 541
HinP1I GCGC 3 cut(s) 264, 266, 541
HinfI GANTC 1 cut(s) 62
HpaII CCGG 4 cut(s) 269, 296, 468, 519
Hpy166II GTNNAC 1 cut(s) 301
Hpy188I TCNGA 1 cut(s) 222
Hpy188III TCNNGA 4 cut(s) 66, 147, 308, 734
Hpy8I GTNNAC 1 cut(s) 301
Hpy99I CGWCG 2 cut(s) 140, 260
HpyAV CCTTC 3 cut(s) 47, 89, 398
HpyCH4III ACNGT 4 cut(s) 187, 305, 391, 694
HpyCH4V TGCA 2 cut(s) 211, 365
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 176, 261, 468, 540
Hsp92I GRCGYC 1 cut(s) 255
Hsp92II CATG 3 cut(s) 311, 447, 566
HspAI GCGC 3 cut(s) 264, 266, 541
KroI GCCGGC 1 cut(s) 268
KroNI GCCGGC 1 cut(s) 270
Kzo9I GATC 3 cut(s) 33, 222, 491
LmnI GCTCC 2 cut(s) 333, 364
Lsp1109I GCAGC 1 cut(s) 223
LweI GCATC 3 cut(s) 301, 346, 624
MaeI CTAG 2 cut(s) 41, 176
MaeIII GTNAC 2 cut(s) 376, 502
MalI GATC 3 cut(s) 35, 224, 493
MbiI CCGCTC 1 cut(s) 548
MboI GATC 3 cut(s) 33, 222, 491
MboII GAAGA 5 cut(s) 20, 31, 134, 137, 449
MfeI CAATTG 1 cut(s) 344
MflI RGATCY 2 cut(s) 33, 491
MluCI AATT 6 cut(s) 205, 215, 241, 344, 448, 606
MlyI GAGTC 1 cut(s) 71
MmeI TCCRAC 2 cut(s) 79, 169
MnlI CCTC 8 cut(s) 4, 15, 123, 544, 568, 571, 592, 595
MroNI GCCGGC 1 cut(s) 268
MseI TTAA 1 cut(s) 513
MslI CAYNNNNRTG 3 cut(s) 306, 392, 695
MspI CCGG 4 cut(s) 269, 296, 468, 519
MunI CAATTG 1 cut(s) 344
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 5 cut(s) 114, 176, 261, 468, 540
NaeI GCCGGC 1 cut(s) 270
NdeII GATC 3 cut(s) 33, 222, 491
NgoMIV GCCGGC 1 cut(s) 268
NlaIII CATG 3 cut(s) 311, 447, 566
NlaIV GGNNCC 1 cut(s) 329
OliI CACNNNNGTG 1 cut(s) 392
PagI TCATGA 1 cut(s) 307
PalAI GGCGCGCC 1 cut(s) 264
PauI GCGCGC 1 cut(s) 264
PdiI GCCGGC 1 cut(s) 270
PinAI ACCGGT 1 cut(s) 295
PkrI GCNGC 2 cut(s) 213, 263
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
PspEI GGTNACC 1 cut(s) 376
PspN4I GGNNCC 1 cut(s) 329
PsuI RGATCY 2 cut(s) 33, 491
PteI GCGCGC 1 cut(s) 264
RsaI GTAC 1 cut(s) 498
RsaNI GTAC 1 cut(s) 497
RseI CAYNNNNRTG 3 cut(s) 306, 392, 695
SaqAI TTAA 1 cut(s) 513
SatI GCNGC 2 cut(s) 212, 262
Sau3AI GATC 3 cut(s) 33, 222, 491
SchI GAGTC 1 cut(s) 71
SetI ASST 6 cut(s) 134, 181, 199, 513, 555, 582
SfaNI GCATC 3 cut(s) 301, 346, 624
SgsI GGCGCGCC 1 cut(s) 264
SmiMI CAYNNNNRTG 3 cut(s) 306, 392, 695
Sse9I AATT 6 cut(s) 205, 215, 241, 344, 448, 606
SsiI CCGC 9 cut(s) 44, 55, 261, 282, 381, 471, 534, 548, 627
SspMI CTAG 2 cut(s) 41, 176
TaaI ACNGT 4 cut(s) 187, 305, 391, 694
TasI AATT 6 cut(s) 205, 215, 241, 344, 448, 606
TatI WGTACW 1 cut(s) 496
TauI GCSGC 1 cut(s) 264
Tru1I TTAA 1 cut(s) 513
Tru9I TTAA 1 cut(s) 513
TscAI CASTG 2 cut(s) 124, 678
TseI GCWGC 1 cut(s) 211
TspDTI ATGAA 2 cut(s) 417, 551
TspGWI ACGGA 1 cut(s) 648
TspRI CASTG 2 cut(s) 124, 678
XagI CCTNNNNNAGG 1 cut(s) 596
XapI RAATTY 2 cut(s) 205, 448
XspI CTAG 2 cut(s) 41, 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.