MADS-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45660 AT2G45660 |
| fragaria_vesca | FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 FvH4_7g12700 |
| malus_domestica | MD02G1197400.v1.1 MD07G1123600.v1.1 |
| prunus_persica | Prupe.2G151200_v2.0.a1 Prupe.2G151200_v2.0.a1 |
| pyrus_communis | pycom02g16090 pycom07g11630 |
| rosa_chinensis | RchiOBHm_Chr1g0351691 |
| rosa_laevigata | RLG00000028389 |
| rosa_multiflora | Rmu_sc0001144.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00303610 |
| rosa_rugosa | Rorug01G0220700 |
| rosa_samantha | Rh1AG234700 Rh1BG205300 Rh1CG219400 Rh1DG232300 |
| rosa_wichuraiana | Rw1G020440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 387 |
| AclWI | GGATC | 1 cut(s) | 340 |
| AcsI | RAATTY | 1 cut(s) | 154 |
| AcuI | CTGAAG | 2 cut(s) | 200, 272 |
| AfaI | GTAC | 1 cut(s) | 556 |
| AgsI | TTSAA | 3 cut(s) | 296, 421, 505 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 570, 602 |
| AluBI | AGCT | 4 cut(s) | 90, 289, 467, 561 |
| AluI | AGCT | 4 cut(s) | 90, 289, 467, 561 |
| Alw21I | GWGCWC | 2 cut(s) | 92, 369 |
| Alw26I | GTCTC | 1 cut(s) | 566 |
| AlwI | GGATC | 1 cut(s) | 340 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 250 |
| AoxI | GGCC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 1 cut(s) | 244 |
| ApoI | RAATTY | 1 cut(s) | 154 |
| AspLEI | GCGC | 2 cut(s) | 58, 615 |
| AsuHPI | GGTGA | 1 cut(s) | 44 |
| BanII | GRGCYC | 2 cut(s) | 92, 403 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 371, 403 |
| Bbv12I | GWGCWC | 2 cut(s) | 92, 369 |
| BbvCI | CCTCAGC | 1 cut(s) | 110 |
| BbvI | GCAGC | 1 cut(s) | 256 |
| BceAI | ACGGC | 1 cut(s) | 323 |
| BcoDI | GTCTC | 1 cut(s) | 566 |
| BfaI | CTAG | 5 cut(s) | 222, 228, 267, 329, 616 |
| BfoI | RGCGCY | 1 cut(s) | 616 |
| BisI | GCNGC | 1 cut(s) | 245 |
| BlsI | GCNGC | 1 cut(s) | 246 |
| BmsI | GCATC | 2 cut(s) | 96, 256 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 131, 163 |
| Bpu10I | CCTNAGC | 1 cut(s) | 110 |
| Bse1I | ACTGG | 3 cut(s) | 216, 370, 486 |
| BseGI | GGATG | 1 cut(s) | 571 |
| BseMII | CTCAG | 4 cut(s) | 60, 101, 107, 431 |
| BseNI | ACTGG | 3 cut(s) | 216, 370, 486 |
| BseRI | GAGGAG | 1 cut(s) | 449 |
| BseXI | GCAGC | 1 cut(s) | 256 |
| BshFI | GGCC | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 2 cut(s) | 92, 369 |
| BsiSI | CCGG | 1 cut(s) | 596 |
| BsmAI | GTCTC | 1 cut(s) | 566 |
| BsnI | GGCC | 1 cut(s) | 82 |
| Bsp1286I | GDGCHC | 3 cut(s) | 92, 369, 403 |
| Bsp143I | GATC | 1 cut(s) | 332 |
| BspANI | GGCC | 1 cut(s) | 82 |
| BspCNI | CTCAG | 4 cut(s) | 59, 102, 106, 432 |
| BspPI | GGATC | 1 cut(s) | 340 |
| BspQI | GCTCTTC | 1 cut(s) | 374 |
| BsrI | ACTGG | 3 cut(s) | 216, 370, 486 |
| BssMI | GATC | 1 cut(s) | 332 |
| Bst6I | CTCTTC | 2 cut(s) | 374, 520 |
| BstC8I | GCNNGC | 1 cut(s) | 186 |
| BstDEI | CTNAG | 4 cut(s) | 46, 93, 110, 440 |
| BstF5I | GGATG | 1 cut(s) | 571 |
| BstH2I | RGCGCY | 1 cut(s) | 616 |
| BstHHI | GCGC | 2 cut(s) | 58, 615 |
| BstKTI | GATC | 1 cut(s) | 335 |
| BstMAI | GTCTC | 1 cut(s) | 566 |
| BstMBI | GATC | 1 cut(s) | 332 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 253, 286 |
| BstNSI | RCATGY | 1 cut(s) | 188 |
| BstV1I | GCAGC | 1 cut(s) | 256 |
| BsuRI | GGCC | 1 cut(s) | 82 |
| BtgZI | GCGATG | 1 cut(s) | 119 |
| BtsCI | GGATG | 1 cut(s) | 571 |
| Cac8I | GCNNGC | 1 cut(s) | 186 |
| CaiI | CAGNNNCTG | 1 cut(s) | 250 |
| CfoI | GCGC | 2 cut(s) | 58, 615 |
| CseI | GACGC | 1 cut(s) | 373 |
| Csp6I | GTAC | 1 cut(s) | 555 |
| CviAII | CATG | 3 cut(s) | 185, 271, 336 |
| CviJI | RGCY | 6 cut(s) | 82, 90, 289, 401, 467, 561 |
| CviKI_1 | RGCY | 6 cut(s) | 82, 90, 289, 401, 467, 561 |
| CviQI | GTAC | 1 cut(s) | 555 |
| DdeI | CTNAG | 4 cut(s) | 46, 93, 110, 440 |
| DpnI | GATC | 1 cut(s) | 334 |
| DpnII | GATC | 1 cut(s) | 332 |
| Eam1104I | CTCTTC | 2 cut(s) | 374, 520 |
| EarI | CTCTTC | 2 cut(s) | 374, 520 |
| Ecl136II | GAGCTC | 1 cut(s) | 90 |
| Eco147I | AGGCCT | 1 cut(s) | 82 |
| Eco24I | GRGCYC | 2 cut(s) | 92, 403 |
| Eco53kI | GAGCTC | 1 cut(s) | 90 |
| Eco57I | CTGAAG | 2 cut(s) | 200, 272 |
| EcoICRI | GAGCTC | 1 cut(s) | 90 |
| EcoT38I | GRGCYC | 2 cut(s) | 92, 403 |
| FaeI | CATG | 3 cut(s) | 188, 274, 339 |
| FaiI | YATR | 6 cut(s) | 60, 186, 242, 272, 337, 495 |
| FatI | CATG | 3 cut(s) | 184, 270, 335 |
| FblI | GTMKAC | 1 cut(s) | 387 |
| Fnu4HI | GCNGC | 1 cut(s) | 245 |
| FokI | GGATG | 1 cut(s) | 578 |
| FriOI | GRGCYC | 2 cut(s) | 92, 403 |
| Fsp4HI | GCNGC | 1 cut(s) | 245 |
| FspBI | CTAG | 5 cut(s) | 222, 228, 267, 329, 616 |
| GlaI | GCGC | 2 cut(s) | 57, 614 |
| GluI | GCNGC | 1 cut(s) | 245 |
| HaeII | RGCGCY | 1 cut(s) | 616 |
| HaeIII | GGCC | 1 cut(s) | 82 |
| HapII | CCGG | 1 cut(s) | 596 |
| HgaI | GACGC | 1 cut(s) | 373 |
| HhaI | GCGC | 2 cut(s) | 58, 615 |
| Hin1II | CATG | 3 cut(s) | 188, 274, 339 |
| Hin6I | GCGC | 2 cut(s) | 56, 613 |
| HinP1I | GCGC | 2 cut(s) | 56, 613 |
| HinfI | GANTC | 3 cut(s) | 74, 325, 409 |
| HpaII | CCGG | 1 cut(s) | 596 |
| HphI | GGTGA | 1 cut(s) | 44 |
| Hpy166II | GTNNAC | 3 cut(s) | 19, 233, 388 |
| Hpy188I | TCNGA | 5 cut(s) | 49, 180, 252, 398, 565 |
| Hpy188III | TCNNGA | 3 cut(s) | 167, 293, 505 |
| Hpy8I | GTNNAC | 3 cut(s) | 19, 233, 388 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyCH4IV | ACGT | 1 cut(s) | 393 |
| HpyCH4V | TGCA | 4 cut(s) | 160, 244, 339, 347 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 253, 286 |
| HpyF3I | CTNAG | 4 cut(s) | 46, 93, 110, 440 |
| HpySE526I | ACGT | 1 cut(s) | 393 |
| Hsp92II | CATG | 3 cut(s) | 188, 274, 339 |
| HspAI | GCGC | 2 cut(s) | 56, 613 |
| Kzo9I | GATC | 1 cut(s) | 332 |
| LguI | GCTCTTC | 1 cut(s) | 374 |
| LpnPI | CCDG | 7 cut(s) | 150, 180, 229, 383, 398, 467, 609 |
| Lsp1109I | GCAGC | 1 cut(s) | 256 |
| LweI | GCATC | 2 cut(s) | 96, 256 |
| MaeI | CTAG | 5 cut(s) | 222, 228, 267, 329, 616 |
| MaeII | ACGT | 1 cut(s) | 393 |
| MalI | GATC | 1 cut(s) | 334 |
| MboI | GATC | 1 cut(s) | 332 |
| MboII | GAAGA | 3 cut(s) | 120, 391, 537 |
| MhlI | GDGCHC | 3 cut(s) | 92, 369, 403 |
| MluCI | AATT | 3 cut(s) | 154, 350, 578 |
| MlyI | GAGTC | 2 cut(s) | 83, 334 |
| MmeI | TCCRAC | 1 cut(s) | 354 |
| MnlI | CCTC | 7 cut(s) | 30, 46, 105, 130, 133, 470, 603 |
| MspA1I | CMGCKG | 1 cut(s) | 467 |
| MspI | CCGG | 1 cut(s) | 596 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 253, 286 |
| NdeII | GATC | 1 cut(s) | 332 |
| NlaIII | CATG | 3 cut(s) | 188, 274, 339 |
| NspI | RCATGY | 1 cut(s) | 188 |
| PaeI | GCATGC | 1 cut(s) | 188 |
| PceI | AGGCCT | 1 cut(s) | 82 |
| PciSI | GCTCTTC | 1 cut(s) | 374 |
| PfeI | GAWTC | 1 cut(s) | 409 |
| PkrI | GCNGC | 1 cut(s) | 246 |
| PleI | GAGTC | 2 cut(s) | 82, 333 |
| PpsI | GAGTC | 2 cut(s) | 82, 333 |
| Psp124BI | GAGCTC | 1 cut(s) | 92 |
| PstNI | CAGNNNCTG | 1 cut(s) | 250 |
| PvuII | CAGCTG | 1 cut(s) | 467 |
| RsaI | GTAC | 1 cut(s) | 556 |
| RsaNI | GTAC | 1 cut(s) | 555 |
| SacI | GAGCTC | 1 cut(s) | 92 |
| SapI | GCTCTTC | 1 cut(s) | 374 |
| SatI | GCNGC | 1 cut(s) | 245 |
| Sau3AI | GATC | 1 cut(s) | 332 |
| SchI | GAGTC | 2 cut(s) | 83, 334 |
| SduI | GDGCHC | 3 cut(s) | 92, 369, 403 |
| SetI | ASST | 7 cut(s) | 92, 116, 291, 396, 417, 469, 563 |
| SfaNI | GCATC | 2 cut(s) | 96, 256 |
| SphI | GCATGC | 1 cut(s) | 188 |
| Sse9I | AATT | 3 cut(s) | 154, 350, 578 |
| SseBI | AGGCCT | 1 cut(s) | 82 |
| SspMI | CTAG | 5 cut(s) | 222, 228, 267, 329, 616 |
| SstI | GAGCTC | 1 cut(s) | 92 |
| StuI | AGGCCT | 1 cut(s) | 82 |
| TaiI | ACGT | 1 cut(s) | 396 |
| TasI | AATT | 3 cut(s) | 154, 350, 578 |
| TatI | WGTACW | 1 cut(s) | 554 |
| TfiI | GAWTC | 1 cut(s) | 409 |
| TseI | GCWGC | 1 cut(s) | 244 |
| TspDTI | ATGAA | 3 cut(s) | 290, 561, 574 |
| XapI | RAATTY | 1 cut(s) | 154 |
| XceI | RCATGY | 1 cut(s) | 188 |
| XmiI | GTMKAC | 1 cut(s) | 387 |
| XspI | CTAG | 5 cut(s) | 222, 228, 267, 329, 616 |