Lysosomal beta
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g32780 |
| pyrus_communis | pycom02g22120 pycom02g22160 pycom11g06830 |
| rosa_laevigata | RLG00000022033 RLG00000022035 RLG00000022037 RLG00000022039 RLG00000022041 RLG00000022043 RLG00000022045 RLG00000022047 RLG00000022048 RLG00000022050 RLG00000022061 RLG00000022081 |
| rosa_multiflora | Rmu_ssc0000252.1_g000030 |
| rosa_roxburghii | Rroxscaffold_1G00032230 Rroxscaffold_2G00080370 |
| rosa_samantha | Rh2BG641200 Rh2BG641300 Rh2DG652100 Rh2DG652200 |
| rosa_wichuraiana | Rw2G052260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 270 |
| AclI | AACGTT | 1 cut(s) | 84 |
| AclWI | GGATC | 4 cut(s) | 53, 105, 213, 278 |
| AcsI | RAATTY | 2 cut(s) | 47, 318 |
| AfaI | GTAC | 1 cut(s) | 103 |
| AgeI | ACCGGT | 1 cut(s) | 414 |
| AgsI | TTSAA | 2 cut(s) | 19, 256 |
| AjnI | CCWGG | 2 cut(s) | 69, 201 |
| AluBI | AGCT | 1 cut(s) | 193 |
| AluI | AGCT | 1 cut(s) | 193 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| AlwI | GGATC | 4 cut(s) | 53, 105, 213, 278 |
| ApoI | RAATTY | 2 cut(s) | 47, 318 |
| AseI | ATTAAT | 1 cut(s) | 54 |
| AsiGI | ACCGGT | 1 cut(s) | 414 |
| AspS9I | GGNCC | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| AvaII | GGWCC | 1 cut(s) | 28 |
| BccI | CCATC | 2 cut(s) | 251, 364 |
| BciT130I | CCWGG | 2 cut(s) | 71, 203 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BfaI | CTAG | 2 cut(s) | 182, 323 |
| Bme1390I | CCNGG | 2 cut(s) | 71, 203 |
| Bme18I | GGWCC | 1 cut(s) | 28 |
| BmgT120I | GGNCC | 1 cut(s) | 28 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 2 cut(s) | 71, 203 |
| BmsI | GCATC | 1 cut(s) | 100 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| BsaWI | WCCGGW | 1 cut(s) | 414 |
| Bse118I | RCCGGY | 2 cut(s) | 329, 414 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| BseBI | CCWGG | 2 cut(s) | 71, 203 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 375 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BshTI | ACCGGT | 1 cut(s) | 414 |
| BsiSI | CCGG | 2 cut(s) | 330, 415 |
| BslFI | GGGAC | 2 cut(s) | 14, 74 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| BsmFI | GGGAC | 2 cut(s) | 14, 74 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp143I | GATC | 4 cut(s) | 58, 97, 205, 283 |
| Bsp19I | CCATGG | 1 cut(s) | 144 |
| BspACI | CCGC | 1 cut(s) | 270 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspPI | GGATC | 4 cut(s) | 53, 105, 213, 278 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 2 cut(s) | 329, 414 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssAI | RCCGGY | 2 cut(s) | 329, 414 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 4 cut(s) | 58, 97, 205, 283 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst2UI | CCWGG | 2 cut(s) | 71, 203 |
| Bst6I | CTCTTC | 1 cut(s) | 303 |
| BstC8I | GCNNGC | 1 cut(s) | 331 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 375 |
| BstKTI | GATC | 4 cut(s) | 61, 100, 208, 286 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 4 cut(s) | 58, 97, 205, 283 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 227, 433 |
| BstNI | CCWGG | 2 cut(s) | 71, 203 |
| BstSCI | CCNGG | 2 cut(s) | 69, 201 |
| BstX2I | RGATCY | 1 cut(s) | 283 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 70, 366 |
| BstYI | RGATCY | 1 cut(s) | 283 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtgZI | GCGATG | 1 cut(s) | 417 |
| BtsCI | GGATG | 1 cut(s) | 375 |
| BtsIMutI | CAGTG | 1 cut(s) | 401 |
| Cac8I | GCNNGC | 1 cut(s) | 331 |
| Cfr10I | RCCGGY | 2 cut(s) | 329, 414 |
| Cfr13I | GGNCC | 1 cut(s) | 28 |
| CsiI | ACCWGGT | 1 cut(s) | 69 |
| Csp6I | GTAC | 1 cut(s) | 102 |
| CspAI | ACCGGT | 1 cut(s) | 414 |
| CviAII | CATG | 4 cut(s) | 25, 145, 338, 382 |
| CviJI | RGCY | 6 cut(s) | 170, 180, 193, 201, 230, 355 |
| CviKI_1 | RGCY | 6 cut(s) | 170, 180, 193, 201, 230, 355 |
| CviQI | GTAC | 1 cut(s) | 102 |
| DpnI | GATC | 4 cut(s) | 60, 99, 207, 285 |
| DpnII | GATC | 4 cut(s) | 58, 97, 205, 283 |
| Eam1104I | CTCTTC | 1 cut(s) | 303 |
| EarI | CTCTTC | 1 cut(s) | 303 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 1 cut(s) | 28 |
| EcoRI | GAATTC | 1 cut(s) | 47 |
| EcoRII | CCWGG | 2 cut(s) | 69, 201 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 4 cut(s) | 28, 148, 341, 385 |
| FaiI | YATR | 9 cut(s) | 26, 42, 146, 210, 293, 339, 383, 409, 439 |
| FaqI | GGGAC | 2 cut(s) | 14, 74 |
| FatI | CATG | 4 cut(s) | 24, 144, 337, 381 |
| FauI | CCCGC | 1 cut(s) | 263 |
| FokI | GGATG | 1 cut(s) | 382 |
| FspBI | CTAG | 2 cut(s) | 182, 323 |
| HapII | CCGG | 2 cut(s) | 330, 415 |
| Hin1II | CATG | 4 cut(s) | 28, 148, 341, 385 |
| HinfI | GANTC | 2 cut(s) | 124, 391 |
| HpaII | CCGG | 2 cut(s) | 330, 415 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy166II | GTNNAC | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 1 cut(s) | 236 |
| Hpy188III | TCNNGA | 1 cut(s) | 76 |
| Hpy8I | GTNNAC | 1 cut(s) | 141 |
| HpyAV | CCTTC | 3 cut(s) | 13, 114, 301 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 1 cut(s) | 381 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 227, 433 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92II | CATG | 4 cut(s) | 28, 148, 341, 385 |
| KroI | GCCGGC | 1 cut(s) | 329 |
| KroNI | GCCGGC | 1 cut(s) | 331 |
| Kzo9I | GATC | 4 cut(s) | 58, 97, 205, 283 |
| LpnPI | CCDG | 7 cut(s) | 56, 83, 188, 215, 300, 343, 428 |
| LweI | GCATC | 1 cut(s) | 100 |
| MabI | ACCWGGT | 1 cut(s) | 69 |
| MaeI | CTAG | 2 cut(s) | 182, 323 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MalI | GATC | 4 cut(s) | 60, 99, 207, 285 |
| MboI | GATC | 4 cut(s) | 58, 97, 205, 283 |
| MboII | GAAGA | 2 cut(s) | 268, 290 |
| MfeI | CAATTG | 1 cut(s) | 376 |
| MflI | RGATCY | 1 cut(s) | 283 |
| MluCI | AATT | 4 cut(s) | 47, 318, 376, 404 |
| MnlI | CCTC | 2 cut(s) | 220, 306 |
| MroNI | GCCGGC | 1 cut(s) | 329 |
| MseI | TTAA | 3 cut(s) | 54, 66, 442 |
| MspI | CCGG | 2 cut(s) | 330, 415 |
| MspR9I | CCNGG | 2 cut(s) | 71, 203 |
| MunI | CAATTG | 1 cut(s) | 376 |
| MvaI | CCWGG | 2 cut(s) | 71, 203 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 227, 433 |
| NaeI | GCCGGC | 1 cut(s) | 331 |
| NcoI | CCATGG | 1 cut(s) | 144 |
| NdeII | GATC | 4 cut(s) | 58, 97, 205, 283 |
| NgoMIV | GCCGGC | 1 cut(s) | 329 |
| NlaIII | CATG | 4 cut(s) | 28, 148, 341, 385 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| PdiI | GCCGGC | 1 cut(s) | 331 |
| PfeI | GAWTC | 2 cut(s) | 124, 391 |
| PinAI | ACCGGT | 1 cut(s) | 414 |
| PshBI | ATTAAT | 1 cut(s) | 54 |
| Psp1406I | AACGTT | 1 cut(s) | 84 |
| Psp6I | CCWGG | 2 cut(s) | 69, 201 |
| PspGI | CCWGG | 2 cut(s) | 69, 201 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 1 cut(s) | 28 |
| PsuI | RGATCY | 1 cut(s) | 283 |
| RsaI | GTAC | 1 cut(s) | 103 |
| RsaNI | GTAC | 1 cut(s) | 102 |
| SaqAI | TTAA | 3 cut(s) | 54, 66, 442 |
| Sau3AI | GATC | 4 cut(s) | 58, 97, 205, 283 |
| Sau96I | GGNCC | 1 cut(s) | 28 |
| ScrFI | CCNGG | 2 cut(s) | 71, 203 |
| SetI | ASST | 6 cut(s) | 24, 72, 87, 195, 298, 312 |
| SexAI | ACCWGGT | 1 cut(s) | 69 |
| SfaNI | GCATC | 1 cut(s) | 100 |
| SinI | GGWCC | 1 cut(s) | 28 |
| Sse9I | AATT | 4 cut(s) | 47, 318, 376, 404 |
| SsiI | CCGC | 1 cut(s) | 270 |
| SspMI | CTAG | 2 cut(s) | 182, 323 |
| StyD4I | CCNGG | 2 cut(s) | 69, 201 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TasI | AATT | 4 cut(s) | 47, 318, 376, 404 |
| TfiI | GAWTC | 2 cut(s) | 124, 391 |
| Tru1I | TTAA | 3 cut(s) | 54, 66, 442 |
| Tru9I | TTAA | 3 cut(s) | 54, 66, 442 |
| TscAI | CASTG | 1 cut(s) | 401 |
| TspDTI | ATGAA | 2 cut(s) | 40, 420 |
| TspRI | CASTG | 1 cut(s) | 401 |
| VpaK11BI | GGWCC | 1 cut(s) | 28 |
| VspI | ATTAAT | 1 cut(s) | 54 |
| XapI | RAATTY | 2 cut(s) | 47, 318 |
| XspI | CTAG | 2 cut(s) | 182, 323 |