pycom02g23710

Protein of unknown function (DUF667)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
21851818 .. 21852975
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g23710.3

Sequence Viewer

Length: 342 bp
ATGATTGTGAAGAATCTGAAGAAATATTTCACATTTGAGATTCAAATTCTGGATGACAAGAATGTCAGGCGACGTTTTCGAGCTTCCAATTTTCAAGCTGTAACTCGAGTGAAGCCGTATATCTGCACTATGCCGCTGAGGATGGATGATGGCTGGAATCAAATCCAGTTTAATCTGGCTGATTTTACCAGGAGAGCCTATGGAACAAACTATGTGGAGACACTGCGAGTTCAGGTTCATGCAAATTGCCGCCTGAGGAGGATATATTTCTCTGACCGCTTGTACTCTGAAGAGGAACTTCCTCCTGAGTTTAAGTTGTACCTCCCAATGCAGAAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.75

Weight (kDa)

9.77

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014497)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 62
AciI CCGC 3 cut(s) 134, 250, 277
AcsI RAATTY 1 cut(s) 45
AcuI CTGAAG 2 cut(s) 38, 309
AfaI GTAC 2 cut(s) 284, 320
AgsI TTSAA 2 cut(s) 44, 95
AjnI CCWGG 1 cut(s) 188
AluBI AGCT 2 cut(s) 83, 98
AluI AGCT 2 cut(s) 83, 98
Alw26I GTCTC 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 105
ApoI RAATTY 1 cut(s) 45
Asp700I GAANNNNTTC 1 cut(s) 26
AvaI CYCGRG 1 cut(s) 105
AxyI CCTNAGG 1 cut(s) 254
BbvCI CCTCAGC 1 cut(s) 137
BccI CCATC 2 cut(s) 136, 143
BceAI ACGGC 1 cut(s) 100
BciT130I CCWGG 1 cut(s) 190
BcoDI GTCTC 1 cut(s) 212
BisI GCNGC 2 cut(s) 134, 250
BlsI GCNGC 2 cut(s) 135, 251
Bme1390I CCNGG 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 190
Bpu10I CCTNAGC 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 166
Bse21I CCTNAGG 1 cut(s) 254
BseBI CCWGG 1 cut(s) 190
BseGI GGATG 3 cut(s) 58, 147, 151
BseMII CTCAG 3 cut(s) 128, 245, 297
BseNI ACTGG 1 cut(s) 166
BseRI GAGGAG 1 cut(s) 271
BsgI GTGCAG 1 cut(s) 109
BsiHKCI CYCGRG 1 cut(s) 105
BsmAI GTCTC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 105
BspACI CCGC 3 cut(s) 134, 250, 277
BspCNI CTCAG 3 cut(s) 129, 246, 298
BsrI ACTGG 1 cut(s) 166
Bst2UI CCWGG 1 cut(s) 190
Bst6I CTCTTC 1 cut(s) 285
BstDEI CTNAG 3 cut(s) 137, 254, 306
BstF5I GGATG 3 cut(s) 58, 147, 151
BstMAI GTCTC 1 cut(s) 212
BstNI CCWGG 1 cut(s) 190
BstSCI CCNGG 1 cut(s) 188
Bsu36I CCTNAGG 1 cut(s) 254
BtsCI GGATG 3 cut(s) 58, 147, 151
BtsI GCAGTG 1 cut(s) 221
BtsIMutI CAGTG 1 cut(s) 221
Csp6I GTAC 2 cut(s) 283, 319
CspCI CAANNNNNGTGG 2 cut(s) 195, 230
CviAII CATG 2 cut(s) 239, 339
CviJI RGCY 6 cut(s) 83, 98, 115, 153, 179, 197
CviKI_1 RGCY 6 cut(s) 83, 98, 115, 153, 179, 197
CviQI GTAC 2 cut(s) 283, 319
DdeI CTNAG 3 cut(s) 137, 254, 306
DrdI GACNNNNNNGTC 1 cut(s) 62
DseDI GACNNNNNNGTC 1 cut(s) 62
Eam1104I CTCTTC 1 cut(s) 285
EarI CTCTTC 1 cut(s) 285
Eco57I CTGAAG 2 cut(s) 38, 309
Eco81I CCTNAGG 1 cut(s) 254
Eco88I CYCGRG 1 cut(s) 105
EcoRII CCWGG 1 cut(s) 188
FaeI CATG 2 cut(s) 242, 342
FaiI YATR 7 cut(s) 120, 131, 201, 213, 240, 265, 340
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FatI CATG 2 cut(s) 238, 338
Fnu4HI GCNGC 2 cut(s) 134, 250
FokI GGATG 3 cut(s) 65, 154, 158
Fsp4HI GCNGC 2 cut(s) 134, 250
GluI GCNGC 2 cut(s) 134, 250
Hin1II CATG 2 cut(s) 242, 342
HinfI GANTC 3 cut(s) 13, 40, 157
Hpy188I TCNGA 3 cut(s) 18, 274, 289
Hpy188III TCNNGA 2 cut(s) 50, 305
Hpy99I CGWCG 1 cut(s) 75
HpyCH4IV ACGT 1 cut(s) 73
HpyCH4V TGCA 3 cut(s) 126, 242, 331
HpyF3I CTNAG 3 cut(s) 137, 254, 306
HpySE526I ACGT 1 cut(s) 73
Hsp92II CATG 2 cut(s) 242, 342
MaeII ACGT 1 cut(s) 73
MaeIII GTNAC 1 cut(s) 100
MboII GAAGA 3 cut(s) 22, 31, 302
MluCI AATT 3 cut(s) 45, 88, 244
MnlI CCTC 6 cut(s) 132, 249, 252, 286, 312, 332
MroXI GAANNNNTTC 1 cut(s) 26
MseI TTAA 2 cut(s) 171, 312
MspA1I CMGCKG 1 cut(s) 136
MspR9I CCNGG 1 cut(s) 190
MvaI CCWGG 1 cut(s) 190
NlaIII CATG 2 cut(s) 242, 342
PaeR7I CTCGAG 1 cut(s) 105
PdmI GAANNNNTTC 1 cut(s) 26
PfeI GAWTC 3 cut(s) 13, 40, 157
PkrI GCNGC 2 cut(s) 135, 251
Psp6I CCWGG 1 cut(s) 188
PspGI CCWGG 1 cut(s) 188
PspXI VCTCGAGB 1 cut(s) 105
RsaI GTAC 2 cut(s) 284, 320
RsaNI GTAC 2 cut(s) 283, 319
SaqAI TTAA 2 cut(s) 171, 312
SatI GCNGC 2 cut(s) 134, 250
ScrFI CCNGG 1 cut(s) 190
SetI ASST 5 cut(s) 76, 85, 100, 237, 324
Sfr274I CTCGAG 1 cut(s) 105
SlaI CTCGAG 1 cut(s) 105
SmlI CTYRAG 1 cut(s) 105
SmoI CTYRAG 1 cut(s) 105
Sse9I AATT 3 cut(s) 45, 88, 244
SsiI CCGC 3 cut(s) 134, 250, 277
SspI AATATT 1 cut(s) 26
StyD4I CCNGG 1 cut(s) 188
TaiI ACGT 1 cut(s) 76
TaqI TCGA 2 cut(s) 79, 106
TasI AATT 3 cut(s) 45, 88, 244
TatI WGTACW 1 cut(s) 282
TauI GCSGC 2 cut(s) 136, 252
TfiI GAWTC 3 cut(s) 13, 40, 157
Tru1I TTAA 2 cut(s) 171, 312
Tru9I TTAA 2 cut(s) 171, 312
TscAI CASTG 1 cut(s) 228
TspDTI ATGAA 1 cut(s) 227
TspRI CASTG 1 cut(s) 228
XapI RAATTY 1 cut(s) 45
XhoI CTCGAG 1 cut(s) 105
XmnI GAANNNNTTC 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.