Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55840 AT5G55840 AT5G55840 |
| fragaria_vesca | FvH4_3g42930 |
| malus_domestica | MD03G1028500.v1.1 |
| prunus_persica | Prupe.6G024500_v2.0.a1 Prupe.6G024500_v2.0.a1 |
| pyrus_communis | pycom03g02310 |
| rosa_chinensis | RchiOBHm_Chr5g0076971 |
| rosa_laevigata | RLG00000036637 |
| rosa_multiflora | Rmu_sc0004655.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00005180 |
| rosa_rugosa | Rorug05G0449800 Rorug05G0449900 |
| rosa_samantha | Rh5AG504500 Rh5BG526200 Rh5CG550100 Rh5DG538400 |
| rosa_wichuraiana | Rw5G047180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 804, 1445, 3177 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2206 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2359 |
| AccI | GTMKAC | 5 cut(s) | 331, 581, 1328, 1861, 2171 |
| AccII | CGCG | 1 cut(s) | 138 |
| AciI | CCGC | 5 cut(s) | 461, 632, 725, 1294, 2536 |
| AclWI | GGATC | 3 cut(s) | 595, 1724, 2446 |
| AcoI | YGGCCR | 3 cut(s) | 2203, 2533, 2769 |
| AcsI | RAATTY | 4 cut(s) | 1105, 1888, 1907, 2731 |
| AcuI | CTGAAG | 2 cut(s) | 1233, 3116 |
| AcvI | CACGTG | 1 cut(s) | 2894 |
| AdeI | CACNNNGTG | 1 cut(s) | 2159 |
| AfaI | GTAC | 4 cut(s) | 589, 824, 904, 1958 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 107, 257, 2212, 2359, 2371, 3055 |
| AflII | CTTAAG | 1 cut(s) | 737 |
| AflIII | ACRYGT | 4 cut(s) | 1640, 1979, 3027, 3413 |
| AgeI | ACCGGT | 2 cut(s) | 250, 1616 |
| AjiI | CACGTC | 1 cut(s) | 3414 |
| AjnI | CCWGG | 3 cut(s) | 301, 1064, 1401 |
| Alw21I | GWGCWC | 1 cut(s) | 445 |
| Alw26I | GTCTC | 2 cut(s) | 1970, 2612 |
| AlwI | GGATC | 3 cut(s) | 595, 1724, 2446 |
| ApeKI | GCWGC | 8 cut(s) | 848, 1601, 2108, 2570, 2573, 3161, 3199, 3202 |
| ApoI | RAATTY | 4 cut(s) | 1105, 1888, 1907, 2731 |
| AseI | ATTAAT | 3 cut(s) | 1026, 1131, 2814 |
| AsiGI | ACCGGT | 2 cut(s) | 250, 1616 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 29, 2611 |
| AspLEI | GCGC | 2 cut(s) | 122, 3390 |
| AspS9I | GGNCC | 5 cut(s) | 422, 1399, 2362, 2416, 2457 |
| AsuC2I | CCSGG | 2 cut(s) | 2414, 2456 |
| AsuHPI | GGTGA | 3 cut(s) | 1092, 2797, 3281 |
| AvaII | GGWCC | 2 cut(s) | 1399, 2416 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1938, 1971 |
| BalI | TGGCCA | 1 cut(s) | 2771 |
| BanII | GRGCYC | 1 cut(s) | 1231 |
| BbrPI | CACGTG | 1 cut(s) | 2894 |
| Bbv12I | GWGCWC | 1 cut(s) | 445 |
| BbvI | GCAGC | 8 cut(s) | 860, 1613, 2095, 2557, 2585, 3148, 3186, 3189 |
| BceAI | ACGGC | 2 cut(s) | 30, 133 |
| BciT130I | CCWGG | 3 cut(s) | 303, 1066, 1403 |
| BciVI | GTATCC | 3 cut(s) | 2288, 2368, 2393 |
| BclI | TGATCA | 3 cut(s) | 865, 2578, 2968 |
| BcnI | CCSGG | 2 cut(s) | 2414, 2456 |
| BcoDI | GTCTC | 2 cut(s) | 1970, 2612 |
| BfaI | CTAG | 7 cut(s) | 18, 38, 366, 605, 747, 1086, 2180 |
| BfmI | CTRYAG | 2 cut(s) | 537, 2571 |
| BfrI | CTTAAG | 1 cut(s) | 737 |
| BfuI | GTATCC | 3 cut(s) | 2288, 2368, 2393 |
| Bme1390I | CCNGG | 5 cut(s) | 303, 1066, 1403, 2414, 2456 |
| Bme18I | GGWCC | 2 cut(s) | 1399, 2416 |
| BmgBI | CACGTC | 1 cut(s) | 3414 |
| BmgT120I | GGNCC | 5 cut(s) | 422, 1399, 2362, 2416, 2457 |
| BmiI | GGNNCC | 5 cut(s) | 112, 1660, 2351, 2364, 2417 |
| BmrFI | CCNGG | 5 cut(s) | 303, 1066, 1403, 2414, 2456 |
| BmsI | GCATC | 7 cut(s) | 138, 644, 1840, 2714, 2750, 2941, 3012 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2787 |
| BpuEI | CTTGAG | 1 cut(s) | 2284 |
| BpuMI | CCSGG | 2 cut(s) | 2414, 2456 |
| BsaAI | YACGTR | 2 cut(s) | 2061, 2894 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3307 |
| BsaJI | CCNNGG | 3 cut(s) | 1065, 1924, 2695 |
| BsaWI | WCCGGW | 4 cut(s) | 155, 250, 1616, 2516 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 107, 257, 2212, 2359, 2371, 3055 |
| Bse118I | RCCGGY | 3 cut(s) | 250, 1616, 2201 |
| Bse1I | ACTGG | 3 cut(s) | 2206, 2626, 3110 |
| Bse3DI | GCAATG | 3 cut(s) | 2284, 2898, 3369 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3307 |
| BseBI | CCWGG | 3 cut(s) | 303, 1066, 1403 |
| BseDI | CCNNGG | 3 cut(s) | 1065, 1924, 2695 |
| BseJI | GATNNNNATC | 1 cut(s) | 3307 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 107, 257, 2212, 2359, 2371, 3055 |
| BseMI | GCAATG | 3 cut(s) | 2284, 2898, 3369 |
| BseMII | CTCAG | 8 cut(s) | 76, 259, 683, 2274, 2607, 2778, 2895, 3059 |
| BseNI | ACTGG | 3 cut(s) | 2206, 2626, 3110 |
| BseXI | GCAGC | 8 cut(s) | 860, 1613, 2095, 2557, 2585, 3148, 3186, 3189 |
| BseYI | CCCAGC | 3 cut(s) | 1463, 1681, 2078 |
| BsgI | GTGCAG | 1 cut(s) | 1597 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| BshTI | ACCGGT | 2 cut(s) | 250, 1616 |
| BsiHKAI | GWGCWC | 1 cut(s) | 445 |
| BsiSI | CCGG | 8 cut(s) | 156, 251, 1617, 2202, 2413, 2455, 2460, 2517 |
| BslFI | GGGAC | 1 cut(s) | 2429 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 107, 257, 2212, 2359, 2371, 3055 |
| BsmAI | GTCTC | 2 cut(s) | 1970, 2612 |
| BsmFI | GGGAC | 1 cut(s) | 2429 |
| BsmI | GAATGC | 1 cut(s) | 1929 |
| Bsp1286I | GDGCHC | 2 cut(s) | 445, 1231 |
| Bsp1407I | TGTACA | 2 cut(s) | 902, 1956 |
| Bsp19I | CCATGG | 2 cut(s) | 1924, 2695 |
| Bsp68I | TCGCGA | 1 cut(s) | 138 |
| BspACI | CCGC | 5 cut(s) | 461, 632, 725, 1294, 2536 |
| BspCNI | CTCAG | 8 cut(s) | 75, 258, 682, 2273, 2608, 2779, 2896, 3060 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspLI | GGNNCC | 5 cut(s) | 112, 1660, 2351, 2364, 2417 |
| BspMAI | CTGCAG | 1 cut(s) | 2575 |
| BspPI | GGATC | 3 cut(s) | 595, 1724, 2446 |
| BspQI | GCTCTTC | 1 cut(s) | 167 |
| BspTI | CTTAAG | 1 cut(s) | 737 |
| BsrDI | GCAATG | 3 cut(s) | 2284, 2898, 3369 |
| BsrFI | RCCGGY | 3 cut(s) | 250, 1616, 2201 |
| BsrGI | TGTACA | 2 cut(s) | 902, 1956 |
| BsrI | ACTGG | 3 cut(s) | 2206, 2626, 3110 |
| BssAI | RCCGGY | 3 cut(s) | 250, 1616, 2201 |
| BssECI | CCNNGG | 3 cut(s) | 1065, 1924, 2695 |
| BssNAI | GTATAC | 4 cut(s) | 332, 1329, 1862, 2172 |
| BssT1I | CCWWGG | 2 cut(s) | 1924, 2695 |
| Bst1107I | GTATAC | 4 cut(s) | 332, 1329, 1862, 2172 |
| Bst2UI | CCWGG | 3 cut(s) | 303, 1066, 1403 |
| Bst4CI | ACNGT | 3 cut(s) | 579, 796, 1951 |
| Bst6I | CTCTTC | 3 cut(s) | 167, 2229, 3048 |
| BstAFI | CTTAAG | 1 cut(s) | 737 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 406 |
| BstAUI | TGTACA | 2 cut(s) | 902, 1956 |
| BstBAI | YACGTR | 2 cut(s) | 2061, 2894 |
| BstC8I | GCNNGC | 7 cut(s) | 136, 267, 666, 1254, 1513, 2275, 2928 |
| BstDEI | CTNAG | 9 cut(s) | 62, 245, 669, 2260, 2616, 2787, 2904, 3068, 3408 |
| BstDSI | CCRYGG | 2 cut(s) | 1924, 2695 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3053 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstHHI | GCGC | 2 cut(s) | 122, 3390 |
| BstMAI | GTCTC | 2 cut(s) | 1970, 2612 |
| BstNI | CCWGG | 3 cut(s) | 303, 1066, 1403 |
| BstSCI | CCNGG | 5 cut(s) | 301, 1064, 1401, 2412, 2454 |
| BstSFI | CTRYAG | 2 cut(s) | 537, 2571 |
| BstSNI | TACGTA | 1 cut(s) | 2061 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 8 cut(s) | 860, 1613, 2095, 2557, 2585, 3148, 3186, 3189 |
| BstZ17I | GTATAC | 4 cut(s) | 332, 1329, 1862, 2172 |
| BsuI | GTATCC | 3 cut(s) | 2288, 2368, 2393 |
| BtgI | CCRYGG | 2 cut(s) | 1924, 2695 |
| BtgZI | GCGATG | 2 cut(s) | 115, 3165 |
| BtrI | CACGTC | 1 cut(s) | 3414 |
| BtsIMutI | CAGTG | 5 cut(s) | 212, 445, 645, 1520, 3117 |
| BtuMI | TCGCGA | 1 cut(s) | 138 |
| Cac8I | GCNNGC | 7 cut(s) | 136, 267, 666, 1254, 1513, 2275, 2928 |
| CfoI | GCGC | 2 cut(s) | 122, 3390 |
| Cfr10I | RCCGGY | 3 cut(s) | 250, 1616, 2201 |
| Cfr13I | GGNCC | 5 cut(s) | 422, 1399, 2362, 2416, 2457 |
| CseI | GACGC | 1 cut(s) | 1694 |
| CsiI | ACCWGGT | 1 cut(s) | 301 |
| Csp6I | GTAC | 4 cut(s) | 588, 823, 903, 1957 |
| CspAI | ACCGGT | 2 cut(s) | 250, 1616 |
| CviQI | GTAC | 4 cut(s) | 588, 823, 903, 1957 |
| DdeI | CTNAG | 9 cut(s) | 62, 245, 669, 2260, 2616, 2787, 2904, 3068, 3408 |
| DraIII | CACNNNGTG | 1 cut(s) | 2159 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2206 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2206 |
| EaeI | YGGCCR | 3 cut(s) | 2203, 2533, 2769 |
| Eam1104I | CTCTTC | 3 cut(s) | 167, 2229, 3048 |
| EarI | CTCTTC | 3 cut(s) | 167, 2229, 3048 |
| Eco105I | TACGTA | 1 cut(s) | 2061 |
| Eco130I | CCWWGG | 2 cut(s) | 1924, 2695 |
| Eco147I | AGGCCT | 2 cut(s) | 2639, 3135 |
| Eco24I | GRGCYC | 1 cut(s) | 1231 |
| Eco32I | GATATC | 1 cut(s) | 3309 |
| Eco47I | GGWCC | 2 cut(s) | 1399, 2416 |
| Eco57I | CTGAAG | 2 cut(s) | 1233, 3116 |
| Eco72I | CACGTG | 1 cut(s) | 2894 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3053 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2416 |
| EcoRII | CCWGG | 3 cut(s) | 301, 1064, 1401 |
| EcoRV | GATATC | 1 cut(s) | 3309 |
| EcoT14I | CCWWGG | 2 cut(s) | 1924, 2695 |
| EcoT38I | GRGCYC | 1 cut(s) | 1231 |
| ErhI | CCWWGG | 2 cut(s) | 1924, 2695 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 648, 680, 720, 752, 1500, 1532, 3033, 3065 |
| FaqI | GGGAC | 1 cut(s) | 2429 |
| FauI | CCCGC | 1 cut(s) | 468 |
| FauNDI | CATATG | 3 cut(s) | 1710, 1852, 1936 |
| FbaI | TGATCA | 3 cut(s) | 865, 2578, 2968 |
| FblI | GTMKAC | 5 cut(s) | 331, 581, 1328, 1861, 2171 |
| FriOI | GRGCYC | 1 cut(s) | 1231 |
| FspBI | CTAG | 7 cut(s) | 18, 38, 366, 605, 747, 1086, 2180 |
| GlaI | GCGC | 2 cut(s) | 121, 3389 |
| GsaI | CCCAGC | 3 cut(s) | 1467, 1685, 2082 |
| HapII | CCGG | 8 cut(s) | 156, 251, 1617, 2202, 2413, 2455, 2460, 2517 |
| HgaI | GACGC | 1 cut(s) | 1694 |
| HhaI | GCGC | 2 cut(s) | 122, 3390 |
| Hin6I | GCGC | 2 cut(s) | 120, 3388 |
| HinP1I | GCGC | 2 cut(s) | 120, 3388 |
| HincII | GTYRAC | 2 cut(s) | 615, 2586 |
| HindII | GTYRAC | 2 cut(s) | 615, 2586 |
| HindIII | AAGCTT | 4 cut(s) | 734, 1154, 1164, 3098 |
| HinfI | GANTC | 6 cut(s) | 103, 325, 377, 1414, 2513, 3422 |
| HpaI | GTTAAC | 1 cut(s) | 2586 |
| HpaII | CCGG | 8 cut(s) | 156, 251, 1617, 2202, 2413, 2455, 2460, 2517 |
| HphI | GGTGA | 3 cut(s) | 1092, 2797, 3281 |
| Hpy99I | CGWCG | 1 cut(s) | 119 |
| HpyCH4III | ACNGT | 3 cut(s) | 579, 796, 1951 |
| HpyCH4IV | ACGT | 4 cut(s) | 2060, 2893, 3210, 3413 |
| HpyF3I | CTNAG | 9 cut(s) | 62, 245, 669, 2260, 2616, 2787, 2904, 3068, 3408 |
| HpySE526I | ACGT | 4 cut(s) | 2060, 2893, 3210, 3413 |
| HspAI | GCGC | 2 cut(s) | 120, 3388 |
| Ksp22I | TGATCA | 3 cut(s) | 865, 2578, 2968 |
| KspAI | GTTAAC | 1 cut(s) | 2586 |
| LguI | GCTCTTC | 1 cut(s) | 167 |
| LmnI | GCTCC | 4 cut(s) | 110, 790, 2349, 2846 |
| Lsp1109I | GCAGC | 8 cut(s) | 860, 1613, 2095, 2557, 2585, 3148, 3186, 3189 |
| LweI | GCATC | 7 cut(s) | 138, 644, 1840, 2714, 2750, 2941, 3012 |
| MabI | ACCWGGT | 1 cut(s) | 301 |
| MaeI | CTAG | 7 cut(s) | 18, 38, 366, 605, 747, 1086, 2180 |
| MaeII | ACGT | 4 cut(s) | 2060, 2893, 3210, 3413 |
| MfeI | CAATTG | 1 cut(s) | 817 |
| MhlI | GDGCHC | 2 cut(s) | 445, 1231 |
| MlsI | TGGCCA | 1 cut(s) | 2771 |
| MluNI | TGGCCA | 1 cut(s) | 2771 |
| MlyI | GAGTC | 2 cut(s) | 319, 2522 |
| MmeI | TCCRAC | 3 cut(s) | 2069, 2505, 3020 |
| Mox20I | TGGCCA | 1 cut(s) | 2771 |
| MroXI | GAANNNNTTC | 2 cut(s) | 29, 2611 |
| MscI | TGGCCA | 1 cut(s) | 2771 |
| MslI | CAYNNNNRTG | 2 cut(s) | 640, 2663 |
| Msp20I | TGGCCA | 1 cut(s) | 2771 |
| MspA1I | CMGCKG | 1 cut(s) | 2576 |
| MspCI | CTTAAG | 1 cut(s) | 737 |
| MspI | CCGG | 8 cut(s) | 156, 251, 1617, 2202, 2413, 2455, 2460, 2517 |
| MspR9I | CCNGG | 5 cut(s) | 303, 1066, 1403, 2414, 2456 |
| MunI | CAATTG | 1 cut(s) | 817 |
| Mva1269I | GAATGC | 1 cut(s) | 1929 |
| MvaI | CCWGG | 3 cut(s) | 303, 1066, 1403 |
| MvnI | CGCG | 1 cut(s) | 138 |
| NciI | CCSGG | 2 cut(s) | 2414, 2456 |
| NcoI | CCATGG | 2 cut(s) | 1924, 2695 |
| NdeI | CATATG | 3 cut(s) | 1710, 1852, 1936 |
| NlaIV | GGNNCC | 5 cut(s) | 112, 1660, 2351, 2364, 2417 |
| NmuCI | GTSAC | 5 cut(s) | 210, 340, 2884, 2894, 3211 |
| NruI | TCGCGA | 1 cut(s) | 138 |
| PaeI | GCATGC | 1 cut(s) | 1256 |
| PceI | AGGCCT | 2 cut(s) | 2639, 3135 |
| PciI | ACATGT | 3 cut(s) | 1640, 1979, 3027 |
| PciSI | GCTCTTC | 1 cut(s) | 167 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 20 |
| PctI | GAATGC | 1 cut(s) | 1929 |
| PdmI | GAANNNNTTC | 2 cut(s) | 29, 2611 |
| PfeI | GAWTC | 4 cut(s) | 103, 377, 1414, 3422 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2359 |
| PfoI | TCCNGGA | 1 cut(s) | 1401 |
| PinAI | ACCGGT | 2 cut(s) | 250, 1616 |
| PleI | GAGTC | 2 cut(s) | 319, 2521 |
| PmaCI | CACGTG | 1 cut(s) | 2894 |
| PmlI | CACGTG | 1 cut(s) | 2894 |
| PpsI | GAGTC | 2 cut(s) | 319, 2521 |
| Ppu21I | YACGTR | 2 cut(s) | 2061, 2894 |
| PpuMI | RGGWCCY | 1 cut(s) | 2416 |
| PscI | ACATGT | 3 cut(s) | 1640, 1979, 3027 |
| PshBI | ATTAAT | 3 cut(s) | 1026, 1131, 2814 |
| PsiI | TTATAA | 3 cut(s) | 804, 1445, 3177 |
| Psp5II | RGGWCCY | 1 cut(s) | 2416 |
| Psp6I | CCWGG | 3 cut(s) | 301, 1064, 1401 |
| PspCI | CACGTG | 1 cut(s) | 2894 |
| PspFI | CCCAGC | 3 cut(s) | 1463, 1681, 2078 |
| PspGI | CCWGG | 3 cut(s) | 301, 1064, 1401 |
| PspN4I | GGNNCC | 5 cut(s) | 112, 1660, 2351, 2364, 2417 |
| PspPI | GGNCC | 5 cut(s) | 422, 1399, 2362, 2416, 2457 |
| PspPPI | RGGWCCY | 1 cut(s) | 2416 |
| PstI | CTGCAG | 1 cut(s) | 2575 |
| PvuII | CAGCTG | 1 cut(s) | 2576 |
| RruI | TCGCGA | 1 cut(s) | 138 |
| RsaI | GTAC | 4 cut(s) | 589, 824, 904, 1958 |
| RsaNI | GTAC | 4 cut(s) | 588, 823, 903, 1957 |
| RseI | CAYNNNNRTG | 2 cut(s) | 640, 2663 |
| SapI | GCTCTTC | 1 cut(s) | 167 |
| Sau96I | GGNCC | 5 cut(s) | 422, 1399, 2362, 2416, 2457 |
| SchI | GAGTC | 2 cut(s) | 319, 2522 |
| ScrFI | CCNGG | 5 cut(s) | 303, 1066, 1403, 2414, 2456 |
| SduI | GDGCHC | 2 cut(s) | 445, 1231 |
| SexAI | ACCWGGT | 1 cut(s) | 301 |
| SfaNI | GCATC | 7 cut(s) | 138, 644, 1840, 2714, 2750, 2941, 3012 |
| SfcI | CTRYAG | 2 cut(s) | 537, 2571 |
| SinI | GGWCC | 2 cut(s) | 1399, 2416 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 640, 2663 |
| SmlI | CTYRAG | 2 cut(s) | 737, 2299 |
| SmoI | CTYRAG | 2 cut(s) | 737, 2299 |
| SnaBI | TACGTA | 1 cut(s) | 2061 |
| SphI | GCATGC | 1 cut(s) | 1256 |
| SseBI | AGGCCT | 2 cut(s) | 2639, 3135 |
| SsiI | CCGC | 5 cut(s) | 461, 632, 725, 1294, 2536 |
| SspI | AATATT | 1 cut(s) | 2386 |
| SspMI | CTAG | 7 cut(s) | 18, 38, 366, 605, 747, 1086, 2180 |
| StuI | AGGCCT | 2 cut(s) | 2639, 3135 |
| StyD4I | CCNGG | 5 cut(s) | 301, 1064, 1401, 2412, 2454 |
| StyI | CCWWGG | 2 cut(s) | 1924, 2695 |
| TaaI | ACNGT | 3 cut(s) | 579, 796, 1951 |
| TaiI | ACGT | 4 cut(s) | 2063, 2896, 3213, 3416 |
| TaqI | TCGA | 5 cut(s) | 361, 1749, 2405, 2729, 3264 |
| TaqII | GACCGA | 1 cut(s) | 1712 |
| TatI | WGTACW | 3 cut(s) | 587, 902, 1956 |
| TauI | GCSGC | 2 cut(s) | 635, 2538 |
| TfiI | GAWTC | 4 cut(s) | 103, 377, 1414, 3422 |
| TscAI | CASTG | 5 cut(s) | 219, 445, 645, 1527, 3117 |
| TseFI | GTSAC | 5 cut(s) | 210, 340, 2884, 2894, 3211 |
| TseI | GCWGC | 8 cut(s) | 848, 1601, 2108, 2570, 2573, 3161, 3199, 3202 |
| Tsp45I | GTSAC | 5 cut(s) | 210, 340, 2884, 2894, 3211 |
| TspGWI | ACGGA | 1 cut(s) | 1785 |
| TspRI | CASTG | 5 cut(s) | 219, 445, 645, 1527, 3117 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2359 |
| Vha464I | CTTAAG | 1 cut(s) | 737 |
| VpaK11BI | GGWCC | 2 cut(s) | 1399, 2416 |
| VspI | ATTAAT | 3 cut(s) | 1026, 1131, 2814 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3053 |
| XapI | RAATTY | 4 cut(s) | 1105, 1888, 1907, 2731 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 391 |
| XmiI | GTMKAC | 5 cut(s) | 331, 581, 1328, 1861, 2171 |
| XmnI | GAANNNNTTC | 2 cut(s) | 29, 2611 |
| XspI | CTAG | 7 cut(s) | 18, 38, 366, 605, 747, 1086, 2180 |