Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0009474

Physical Location & Seq

Genomic Coordinates Reverse (-)

5420159 .. 5421112

Gene Structure 954 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g06870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 954 bp

ATGGGTGAGGAGGTGAGGATGAGTGAGTACGAAGGAGCTGGCAGCGGCGGCGACAACGAGGCGCGGGTTTCAGAGTGGGAAGCGGGGCTGCCGAGCGCTGATGATTTGACTCCGCTATCCCAGCCGTTGATTCCGATCGAATTGGCCTCGGCCTTCAGCATCTCGCCGGAGCCCTGCCGCACGGCCGTCGACGTCAACCGCGCGTCGCATAAGATGGTCTCGACGCTCCGCGGCGGCGCCCACTCCCAGGGGTTCTCGTCATCGAACTACAAGTCGTTCGACGAGAACCGCAGCGACGACGTGGTGGAGCCGATGGTCGTAGAGGTGGACGAGAGCGGCGAGAGGTACGGATCCGATTCGAGAAAGTCGCGGAAGGTCGATTGCAGTGCGGAGGAGGCGGATTCGGCGCTGAGGACCGAGAATTTCTCGCCGGACGACACGTCAGCTCGGACGCTGAAGCGACCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTGGAGGTGGTGGCCCACCTGGGGATCAAGAACGCGGTGCCCAAGACGATTATGCAGCTGATGAACGTCGAGGGATTGACACGCGAAAACGTCGCCAGCCACCTGCAGAAGTACCGCCTCTACTTGAAGAGGATGCAGGGCTTATCCGGCGACGTGGGGTCCTCCTCGTCGGACAAGCTTTTCGCCACCACGCCGGTACCGCAAAGCTTACGCCACGAGTCTGGCGGCGGCGGCGGTGGCGCTGGGGGCTCGGGTCAGAGCCACGGAAATGGGCAGTTTTCGTTTCCGATGCCGTACCCGCCTGCCGGGATGATGCAGATGCCGGATCTCGGGATGAGCCACGGGCACGGGCACATGGGCATGCCCGGCGGTGGGTACCATGGGTTCGAGTCGCACCACTACAACATGGGTTCGATGGTTTCGTACCAACATGCTGGTTCGAATGACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009909 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

318

Amino Acids

34.16

Weight (kDa)

5.86

Isoelectric Point (pI)

47.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	157 - 206	1.5e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59570 AT5G59570
fragaria_vesca	FvH4_3g36890
malus_domestica	MD03G1086800.v1.1 MD11G1095900.v1.1
prunus_persica	Prupe.6G071400_v2.0.a1 Prupe.6G071400_v2.0.a1 Prupe.6G071400_v2.0.a1
pyrus_communis	pycom03g06870 pycom11g08120
rosa_chinensis	RchiOBHm_Chr5g0066111
rosa_laevigata	RLG00000035843
rosa_multiflora	Rmu_co8136506.1_g000001 Rmu_sc0002406.1_g000009
rosa_roxburghii	Rroxscaffold_1G00014900
rosa_rugosa	Rorug05G0376400 Rorug05G0376400
rosa_samantha	Rh5AG434900 Rh5BG451200 Rh5CG473500 Rh5DG464800
rosa_wichuraiana	Rw5G040730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	612
AatII	GACGTC	1 cut(s)	195
Acc36I	ACCTGC	1 cut(s)	612
Acc65I	GGTACC	2 cut(s)	697, 876
AccB1I	GGYRCC	4 cut(s)	236, 538, 697, 876
AccBSI	CCGCTC	1 cut(s)	336
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
AclWI	GGATC	4 cut(s)	345, 358, 533, 834
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	1 cut(s)	421
AcuI	CTGAAG	2 cut(s)	139, 476
AcyI	GRCGYC	2 cut(s)	192, 237
AfaI	GTAC	7 cut(s)	29, 347, 614, 699, 797, 878, 926
AfeI	AGCGCT	1 cut(s)	97
AfiI	CCNNNNNNNGG	6 cut(s)	247, 522, 806, 830, 872, 873
AflIII	ACRYGT	1 cut(s)	438
AgsI	TTSAA	1 cut(s)	628
AhdI	GACNNNNNGTC	2 cut(s)	439, 658
AjiI	CACGTC	3 cut(s)	301, 441, 655
AjnI	CCWGG	2 cut(s)	246, 519
AluBI	AGCT	6 cut(s)	38, 446, 487, 559, 679, 708
AluI	AGCT	6 cut(s)	38, 446, 487, 559, 679, 708
Alw26I	GTCTC	1 cut(s)	223
AlwI	GGATC	4 cut(s)	345, 358, 533, 834
Ama87I	CYCGRG	2 cut(s)	751, 830
Aor51HI	AGCGCT	1 cut(s)	97
AoxI	GGCC	4 cut(s)	144, 150, 183, 513
ApeKI	GCWGC	6 cut(s)	42, 88, 291, 484, 487, 556
ApoI	RAATTY	1 cut(s)	421
ArsI	GACNNNNNNTTYG	4 cut(s)	257, 289, 665, 697
Asp718I	GGTACC	2 cut(s)	697, 876
AspLEI	GCGC	6 cut(s)	64, 98, 203, 239, 409, 743
AspS9I	GGNCC	4 cut(s)	414, 477, 514, 660
AsuC2I	CCSGG	2 cut(s)	808, 867
AsuHPI	GGTGA	2 cut(s)	17, 25
AsuII	TTCGAA	1 cut(s)	941
AvaI	CYCGRG	2 cut(s)	751, 830
AvaII	GGWCC	3 cut(s)	414, 477, 660
BaeGI	GKGCMC	3 cut(s)	543, 849, 855
BaeI	ACNNNNGTAYC	2 cut(s)	681, 714
BamHI	GGATCC	1 cut(s)	350
BanI	GGYRCC	4 cut(s)	236, 538, 697, 876
BanII	GRGCYC	2 cut(s)	174, 752
BauI	CACGAG	1 cut(s)	716
BbvCI	CCTCAGC	1 cut(s)	410
BbvI	GCAGC	6 cut(s)	54, 75, 303, 474, 496, 568
BccI	CCATC	3 cut(s)	208, 307, 910
BceAI	ACGGC	4 cut(s)	109, 170, 198, 778
BcgI	CGANNNNNNTGC	4 cut(s)	169, 203, 368, 402
BciT130I	CCWGG	2 cut(s)	248, 521
BcnI	CCSGG	2 cut(s)	808, 867
BcoDI	GTCTC	1 cut(s)	223
BfmI	CTRYAG	1 cut(s)	605
BfoI	RGCGCY	4 cut(s)	99, 240, 410, 744
BfuAI	ACCTGC	1 cut(s)	612
Bme1390I	CCNGG	4 cut(s)	248, 521, 808, 867
Bme18I	GGWCC	3 cut(s)	414, 477, 660
BmeRI	GACNNNNNGTC	2 cut(s)	439, 658
BmeT110I	CYCGRG	2 cut(s)	751, 830
BmgBI	CACGTC	3 cut(s)	301, 441, 655
BmgT120I	GGNCC	4 cut(s)	414, 477, 514, 660
BmiI	GGNNCC	9 cut(s)	171, 238, 309, 352, 479, 540, 661, 699, 878
BmrFI	CCNGG	4 cut(s)	248, 521, 808, 867
BmsI	GCATC	5 cut(s)	168, 624, 780, 804, 810
BplI	GAGNNNNNCTC	2 cut(s)	410, 442
Bpu10I	CCTNAGC	1 cut(s)	410
Bpu14I	TTCGAA	1 cut(s)	941
BpuMI	CCSGG	2 cut(s)	808, 867
BsaBI	GATNNNNATC	1 cut(s)	134
BsaHI	GRCGYC	2 cut(s)	192, 237
BsaI	GGTCTC	1 cut(s)	223
BsaJI	CCNNGG	9 cut(s)	147, 229, 246, 247, 464, 520, 763, 841, 880
Bsc4I	CCNNNNNNNGG	6 cut(s)	247, 522, 806, 830, 872, 873
Bse118I	RCCGGY	1 cut(s)	694
Bse8I	GATNNNNATC	1 cut(s)	134
BseBI	CCWGG	2 cut(s)	248, 521
BseDI	CCNNGG	9 cut(s)	147, 229, 246, 247, 464, 520, 763, 841, 880
BseGI	GGATG	4 cut(s)	24, 639, 816, 840
BseJI	GATNNNNATC	1 cut(s)	134
BseLI	CCNNNNNNNGG	6 cut(s)	247, 522, 806, 830, 872, 873
BseMII	CTCAG	1 cut(s)	401
BseRI	GAGGAG	3 cut(s)	23, 407, 655
BseSI	GKGCMC	3 cut(s)	543, 849, 855
BseX3I	CGGCCG	1 cut(s)	183
BseXI	GCAGC	6 cut(s)	54, 75, 303, 474, 496, 568
BseYI	CCCAGC	2 cut(s)	120, 743
BsgI	GTGCAG	1 cut(s)	473
Bsh1236I	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
Bsh1285I	CGRYCG	3 cut(s)	138, 186, 464
BshFI	GGCC	4 cut(s)	146, 152, 185, 515
BshNI	GGYRCC	4 cut(s)	236, 538, 697, 876
BsiEI	CGRYCG	3 cut(s)	138, 186, 464
BsiHKCI	CYCGRG	2 cut(s)	751, 830
BsiSI	CCGG	7 cut(s)	167, 431, 648, 695, 807, 824, 867
BslI	CCNNNNNNNGG	6 cut(s)	247, 522, 806, 830, 872, 873
BsmAI	GTCTC	1 cut(s)	223
BsnI	GGCC	4 cut(s)	146, 152, 185, 515
Bso31I	GGTCTC	1 cut(s)	223
BsoBI	CYCGRG	2 cut(s)	751, 830
Bsp119I	TTCGAA	1 cut(s)	941
Bsp1286I	GDGCHC	5 cut(s)	174, 543, 752, 849, 855
Bsp143I	GATC	4 cut(s)	135, 350, 525, 826
Bsp19I	CCATGG	1 cut(s)	880
BspANI	GGCC	4 cut(s)	146, 152, 185, 515
BspCNI	CTCAG	1 cut(s)	402
BspFNI	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
BspLI	GGNNCC	9 cut(s)	171, 238, 309, 352, 479, 540, 661, 699, 878
BspMAI	CTGCAG	1 cut(s)	609
BspMI	ACCTGC	1 cut(s)	612
BspPI	GGATC	4 cut(s)	345, 358, 533, 834
BspT104I	TTCGAA	1 cut(s)	941
BspT107I	GGYRCC	4 cut(s)	236, 538, 697, 876
BspTNI	GGTCTC	1 cut(s)	223
BsrBI	CCGCTC	1 cut(s)	336
BsrFI	RCCGGY	1 cut(s)	694
BssAI	RCCGGY	1 cut(s)	694
BssECI	CCNNGG	9 cut(s)	147, 229, 246, 247, 464, 520, 763, 841, 880
BssMI	GATC	4 cut(s)	135, 350, 525, 826
BssNI	GRCGYC	2 cut(s)	192, 237
BssSI	CACGAG	1 cut(s)	716
BssT1I	CCWWGG	1 cut(s)	880
Bst2BI	CACGAG	1 cut(s)	716
Bst2UI	CCWGG	2 cut(s)	248, 521
Bst6I	CTCTTC	1 cut(s)	623
BstACI	GRCGYC	2 cut(s)	192, 237
BstBI	TTCGAA	1 cut(s)	941
BstC8I	GCNNGC	4 cut(s)	40, 598, 804, 863
BstDEI	CTNAG	1 cut(s)	410
BstDSI	CCRYGG	5 cut(s)	229, 464, 763, 841, 880
BstF5I	GGATG	4 cut(s)	24, 639, 816, 840
BstFNI	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
BstH2I	RGCGCY	4 cut(s)	99, 240, 410, 744
BstHHI	GCGC	6 cut(s)	64, 98, 203, 239, 409, 743
BstKTI	GATC	4 cut(s)	138, 353, 528, 829
BstMAI	GTCTC	1 cut(s)	223
BstMBI	GATC	4 cut(s)	135, 350, 525, 826
BstMCI	CGRYCG	3 cut(s)	138, 186, 464
BstNI	CCWGG	2 cut(s)	248, 521
BstNSI	RCATGY	2 cut(s)	865, 935
BstSCI	CCNGG	4 cut(s)	246, 519, 806, 865
BstSFI	CTRYAG	1 cut(s)	605
BstSLI	GKGCMC	3 cut(s)	543, 849, 855
BstUI	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
BstV1I	GCAGC	6 cut(s)	54, 75, 303, 474, 496, 568
BstX2I	RGATCY	2 cut(s)	350, 826
BstXI	CCANNNNNNTGG	3 cut(s)	722, 770, 935
BstYI	RGATCY	2 cut(s)	350, 826
BstZI	CGGCCG	1 cut(s)	183
BsuRI	GGCC	4 cut(s)	146, 152, 185, 515
BtgI	CCRYGG	5 cut(s)	229, 464, 763, 841, 880
BtrI	CACGTC	3 cut(s)	301, 441, 655
BtsCI	GGATG	4 cut(s)	24, 639, 816, 840
BtsI	GCAGTG	1 cut(s)	391
BtsIMutI	CAGTG	1 cut(s)	391
BveI	ACCTGC	1 cut(s)	612
Cac8I	GCNNGC	4 cut(s)	40, 598, 804, 863
CfoI	GCGC	6 cut(s)	64, 98, 203, 239, 409, 743
Cfr10I	RCCGGY	1 cut(s)	694
Cfr13I	GGNCC	4 cut(s)	414, 477, 514, 660
Cfr42I	CCGCGG	2 cut(s)	232, 467
CseI	GACGC	3 cut(s)	192, 232, 460
Csp6I	GTAC	7 cut(s)	28, 346, 613, 698, 796, 877, 925
CviAII	CATG	5 cut(s)	856, 862, 881, 907, 932
CviQI	GTAC	7 cut(s)	28, 346, 613, 698, 796, 877, 925
DdeI	CTNAG	1 cut(s)	410
DinI	GGCGCC	1 cut(s)	238
DpnI	GATC	4 cut(s)	137, 352, 527, 828
DpnII	GATC	4 cut(s)	135, 350, 525, 826
DriI	GACNNNNNGTC	2 cut(s)	439, 658
EaeI	YGGCCR	1 cut(s)	183
EagI	CGGCCG	1 cut(s)	183
Eam1104I	CTCTTC	1 cut(s)	623
Eam1105I	GACNNNNNGTC	2 cut(s)	439, 658
EarI	CTCTTC	1 cut(s)	623
EciI	GGCGGA	1 cut(s)	413
EclXI	CGGCCG	1 cut(s)	183
Eco130I	CCWWGG	1 cut(s)	880
Eco24I	GRGCYC	2 cut(s)	174, 752
Eco31I	GGTCTC	1 cut(s)	223
Eco47I	GGWCC	3 cut(s)	414, 477, 660
Eco47III	AGCGCT	1 cut(s)	97
Eco52I	CGGCCG	1 cut(s)	183
Eco57I	CTGAAG	2 cut(s)	139, 476
Eco88I	CYCGRG	2 cut(s)	751, 830
EcoO109I	RGGNCCY	1 cut(s)	660
EcoRII	CCWGG	2 cut(s)	246, 519
EcoT14I	CCWWGG	1 cut(s)	880
EcoT38I	GRGCYC	2 cut(s)	174, 752
EgeI	GGCGCC	1 cut(s)	238
EheI	GGCGCC	1 cut(s)	238
ErhI	CCWWGG	1 cut(s)	880
FaeI	CATG	5 cut(s)	859, 865, 884, 910, 935
FaiI	YATR	7 cut(s)	210, 554, 857, 863, 882, 908, 933
FatI	CATG	5 cut(s)	855, 861, 880, 906, 931
FauI	CCCGC	4 cut(s)	57, 76, 489, 807
FblI	GTMKAC	1 cut(s)	189
FokI	GGATG	4 cut(s)	31, 646, 823, 847
FriOI	GRGCYC	2 cut(s)	174, 752
GlaI	GCGC	6 cut(s)	63, 97, 202, 238, 408, 742
GsaI	CCCAGC	2 cut(s)	124, 747
HaeII	RGCGCY	4 cut(s)	99, 240, 410, 744
HaeIII	GGCC	4 cut(s)	146, 152, 185, 515
HapII	CCGG	7 cut(s)	167, 431, 648, 695, 807, 824, 867
HgaI	GACGC	3 cut(s)	192, 232, 460
HhaI	GCGC	6 cut(s)	64, 98, 203, 239, 409, 743
Hin1I	GRCGYC	2 cut(s)	192, 237
Hin1II	CATG	5 cut(s)	859, 865, 884, 910, 935
Hin6I	GCGC	6 cut(s)	62, 96, 201, 237, 407, 741
HinP1I	GCGC	6 cut(s)	62, 96, 201, 237, 407, 741
HincII	GTYRAC	2 cut(s)	190, 196
HindII	GTYRAC	2 cut(s)	190, 196
HindIII	AAGCTT	2 cut(s)	677, 706
HinfI	GANTC	6 cut(s)	109, 130, 356, 401, 719, 890
HpaII	CCGG	7 cut(s)	167, 431, 648, 695, 807, 824, 867
HphI	GGTGA	2 cut(s)	17, 25
Hpy166II	GTNNAC	4 cut(s)	190, 196, 328, 477
Hpy188I	TCNGA	7 cut(s)	73, 135, 355, 450, 673, 759, 789
Hpy188III	TCNNGA	4 cut(s)	220, 360, 529, 832
Hpy8I	GTNNAC	4 cut(s)	190, 196, 328, 477
HpyAV	CCTTC	3 cut(s)	26, 163, 367
HpyCH4IV	ACGT	6 cut(s)	192, 300, 440, 567, 591, 654
HpyCH4V	TGCA	6 cut(s)	384, 490, 556, 607, 637, 817
HpyF3I	CTNAG	1 cut(s)	410
HpySE526I	ACGT	6 cut(s)	192, 300, 440, 567, 591, 654
Hsp92I	GRCGYC	2 cut(s)	192, 237
Hsp92II	CATG	5 cut(s)	859, 865, 884, 910, 935
HspAI	GCGC	6 cut(s)	62, 96, 201, 237, 407, 741
KasI	GGCGCC	1 cut(s)	236
KpnI	GGTACC	2 cut(s)	701, 880
KspI	CCGCGG	2 cut(s)	232, 467
Kzo9I	GATC	4 cut(s)	135, 350, 525, 826
LmnI	GCTCC	4 cut(s)	35, 169, 231, 307
Lsp1109I	GCAGC	6 cut(s)	54, 75, 303, 474, 496, 568
LweI	GCATC	5 cut(s)	168, 624, 780, 804, 810
MaeII	ACGT	6 cut(s)	192, 300, 440, 567, 591, 654
MalI	GATC	4 cut(s)	137, 352, 527, 828
MbiI	CCGCTC	1 cut(s)	336
MboI	GATC	4 cut(s)	135, 350, 525, 826
MboII	GAAGA	1 cut(s)	640
MflI	RGATCY	2 cut(s)	350, 826
MhlI	GDGCHC	5 cut(s)	174, 543, 752, 849, 855
MluCI	AATT	2 cut(s)	140, 421
Mly113I	GGCGCC	1 cut(s)	237
MlyI	GAGTC	3 cut(s)	103, 728, 899
MmeI	TCCRAC	1 cut(s)	651
MslI	CAYNNNNRTG	2 cut(s)	768, 860
MspA1I	CMGCKG	5 cut(s)	45, 231, 466, 487, 559
MspI	CCGG	7 cut(s)	167, 431, 648, 695, 807, 824, 867
MspR9I	CCNGG	4 cut(s)	248, 521, 808, 867
MvaI	CCWGG	2 cut(s)	248, 521
MvnI	CGCG	8 cut(s)	64, 201, 203, 231, 370, 466, 536, 585
NarI	GGCGCC	1 cut(s)	237
NciI	CCSGG	2 cut(s)	808, 867
NcoI	CCATGG	1 cut(s)	880
NdeII	GATC	4 cut(s)	135, 350, 525, 826
NlaIII	CATG	5 cut(s)	859, 865, 884, 910, 935
NlaIV	GGNNCC	9 cut(s)	171, 238, 309, 352, 479, 540, 661, 699, 878
NmeAIII	GCCGAG	2 cut(s)	117, 128
NspI	RCATGY	2 cut(s)	865, 935
NspV	TTCGAA	1 cut(s)	941
PaeI	GCATGC	1 cut(s)	865
PaqCI	CACCTGC	1 cut(s)	612
PasI	CCCWGGG	1 cut(s)	247
PcsI	WCGNNNNNNNCGW	2 cut(s)	336, 920
PfeI	GAWTC	3 cut(s)	130, 356, 401
Ple19I	CGATCG	1 cut(s)	138
PleI	GAGTC	3 cut(s)	103, 727, 898
PluTI	GGCGCC	1 cut(s)	240
PpsI	GAGTC	3 cut(s)	103, 727, 898
PpuMI	RGGWCCY	1 cut(s)	660
Psp5II	RGGWCCY	1 cut(s)	660
Psp6I	CCWGG	2 cut(s)	246, 519
PspFI	CCCAGC	2 cut(s)	120, 743
PspGI	CCWGG	2 cut(s)	246, 519
PspN4I	GGNNCC	9 cut(s)	171, 238, 309, 352, 479, 540, 661, 699, 878
PspPI	GGNCC	4 cut(s)	414, 477, 514, 660
PspPPI	RGGWCCY	1 cut(s)	660
PsrI	GAACNNNNNNTAC	2 cut(s)	869, 901
PstI	CTGCAG	1 cut(s)	609
PsuI	RGATCY	2 cut(s)	350, 826
PvuI	CGATCG	1 cut(s)	138
PvuII	CAGCTG	2 cut(s)	487, 559
RsaI	GTAC	7 cut(s)	29, 347, 614, 699, 797, 878, 926
RsaNI	GTAC	7 cut(s)	28, 346, 613, 698, 796, 877, 925
RseI	CAYNNNNRTG	2 cut(s)	768, 860
SacII	CCGCGG	2 cut(s)	232, 467
SalI	GTCGAC	1 cut(s)	188
Sau3AI	GATC	4 cut(s)	135, 350, 525, 826
Sau96I	GGNCC	4 cut(s)	414, 477, 514, 660
SchI	GAGTC	3 cut(s)	103, 728, 899
ScrFI	CCNGG	4 cut(s)	248, 521, 808, 867
SduI	GDGCHC	5 cut(s)	174, 543, 752, 849, 855
SfaNI	GCATC	5 cut(s)	168, 624, 780, 804, 810
SfcI	CTRYAG	1 cut(s)	605
SfoI	GGCGCC	1 cut(s)	238
Sfr303I	CCGCGG	2 cut(s)	232, 467
SfuI	TTCGAA	1 cut(s)	941
SgrBI	CCGCGG	2 cut(s)	232, 467
SgrDI	CGTCGACG	1 cut(s)	188
SinI	GGWCC	3 cut(s)	414, 477, 660
SmiMI	CAYNNNNRTG	2 cut(s)	768, 860
SphI	GCATGC	1 cut(s)	865
Sse9I	AATT	2 cut(s)	140, 421
SspDI	GGCGCC	1 cut(s)	236
StyD4I	CCNGG	4 cut(s)	246, 519, 806, 865
StyI	CCWWGG	1 cut(s)	880
TaiI	ACGT	6 cut(s)	195, 303, 443, 570, 594, 657
TaqII	GACCGA	1 cut(s)	431
TasI	AATT	2 cut(s)	140, 421
TfiI	GAWTC	3 cut(s)	130, 356, 401
TscAI	CASTG	1 cut(s)	391
TseI	GCWGC	6 cut(s)	42, 88, 291, 484, 487, 556
TspDTI	ATGAA	1 cut(s)	578
TspGWI	ACGGA	2 cut(s)	363, 780
TspRI	CASTG	1 cut(s)	391
VpaK11BI	GGWCC	3 cut(s)	414, 477, 660
XapI	RAATTY	1 cut(s)	421
XceI	RCATGY	2 cut(s)	865, 935
XmiI	GTMKAC	1 cut(s)	189
ZraI	GACGTC	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.