Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0009474

Physical Location & Seq

Genomic Coordinates Forward (+)

74768569 .. 74769507

Gene Structure 939 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG434900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGGAGAGGAGGTGAGGATGAGCGAGTACGAAGGAGGCGGCAGCGGCGGCGACGGCGACGAGGAGAGGGTTTCGGAGTGGGAGGCCGGGCTTCCGATCGCCGATGATCTGACGCCGCTGTCTCAGCCGTTGATTCCGATGGAGCTGGCGTCGGCGTTCAGTATCTCGCCGGAGCCGTGCCGCACGGTGGTGGACGTCAACCGCGCGTCGCAGAAGACGGTGTCGACGCTGCGTGGGGGAGCTCACTCGCAGGCGTATTCGTCGAACTACAAGTCGTTCGAGGAGAACAACAACCGCAGCGACGAGCCGATGGTGGTGGAGCTGGACGAGACGGAGCCGTACGGCGGCGGGGAAGGATCCGATTCGAGGAAATCGAGGAGGGTTGATAGCCCCGAGGAGGCGGATTCGGCGCTCCGGATCGAGAATTCCTCGGGCGGCGGAGACGACCCGTCGGGTCGGGCGGTCAAGCGGCCGAGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCCCACCTGGGGATCAAGAACGCGGTTCCCAAGACGATTATGCAGCTGATGAACGTGGAAGGATTGACGCGTGAGAATGTGGCCAGCCACTTGCAGAAGTACCGACTCTACTTGAAGAGGATGCAGGGCTTGTCCAACGAGGGCCCCTCCTCGTCCGACCCGCTTTTCGCCTCGACTCCGGTGCCGCAGAGTCTGCACGAGTCGGGTGGAAGCGGGCCGGGTCACAGACAGGGCCACATGCCCATTTCGATCCCCATGCCTTACCCGCCGGGCGCCATGATGGCTATGCCTGGTTACATGGGGATGTCCGGCGGGTACCATGGGTTCGAGTCGCATCCTTCGTATAACATGATGCAGCAGCAGAAGTATGGTTCCATGGTGTCATACCCACCACATGTTGCTCCTAATGAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0007623 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009909 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

312

Amino Acids

33.92

Weight (kDa)

5.41

Isoelectric Point (pI)

56.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	160 - 209	2.1e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59570 AT5G59570
fragaria_vesca	FvH4_3g36890
malus_domestica	MD03G1086800.v1.1 MD11G1095900.v1.1
prunus_persica	Prupe.6G071400_v2.0.a1 Prupe.6G071400_v2.0.a1 Prupe.6G071400_v2.0.a1
pyrus_communis	pycom03g06870 pycom11g08120
rosa_chinensis	RchiOBHm_Chr5g0066111
rosa_laevigata	RLG00000035843
rosa_multiflora	Rmu_co8136506.1_g000001 Rmu_sc0002406.1_g000009
rosa_roxburghii	Rroxscaffold_1G00014900
rosa_rugosa	Rorug05G0376400 Rorug05G0376400
rosa_samantha	Rh5AG434900 Rh5BG451200 Rh5CG473500 Rh5DG464800
rosa_wichuraiana	Rw5G040730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	118
AatII	GACGTC	1 cut(s)	198
Acc65I	GGTACC	1 cut(s)	837
AccB1I	GGYRCC	3 cut(s)	703, 794, 837
AccI	GTMKAC	1 cut(s)	224
AccII	CGCG	4 cut(s)	204, 206, 545, 592
AccIII	TCCGGA	1 cut(s)	414
AclWI	GGATC	5 cut(s)	351, 364, 425, 542, 766
AcoI	YGGCCR	2 cut(s)	470, 603
AcsI	RAATTY	1 cut(s)	424
AcyI	GRCGYC	4 cut(s)	113, 149, 195, 795
AfaI	GTAC	4 cut(s)	29, 341, 623, 839
AfiI	CCNNNNNNNGG	5 cut(s)	187, 344, 366, 397, 531
AflIII	ACRYGT	2 cut(s)	590, 916
AgsI	TTSAA	1 cut(s)	637
AhdI	GACNNNNNGTC	1 cut(s)	448
AjiI	CACGTC	1 cut(s)	517
AjnI	CCWGG	2 cut(s)	528, 811
AleI	CACNNNNGTG	1 cut(s)	188
AluBI	AGCT	5 cut(s)	145, 242, 322, 496, 568
AluI	AGCT	5 cut(s)	145, 242, 322, 496, 568
Alw21I	GWGCWC	1 cut(s)	244
Alw26I	GTCTC	3 cut(s)	126, 323, 435
AlwI	GGATC	5 cut(s)	351, 364, 425, 542, 766
AlwNI	CAGNNNCTG	1 cut(s)	715
Ama87I	CYCGRG	2 cut(s)	392, 430
Aor13HI	TCCGGA	1 cut(s)	414
AoxI	GGCC	7 cut(s)	84, 470, 522, 603, 664, 737, 754
ApaI	GGGCCC	1 cut(s)	668
ApeKI	GCWGC	8 cut(s)	42, 229, 297, 493, 496, 565, 877, 880
ApoI	RAATTY	1 cut(s)	424
ArsI	GACNNNNNNTTYG	4 cut(s)	257, 289, 671, 703
Asp718I	GGTACC	1 cut(s)	837
AspLEI	GCGC	3 cut(s)	206, 412, 797
AspS9I	GGNCC	6 cut(s)	486, 523, 664, 665, 737, 754
AsuC2I	CCSGG	3 cut(s)	88, 741, 792
AsuHPI	GGTGA	1 cut(s)	25
AvaI	CYCGRG	2 cut(s)	392, 430
AvaII	GGWCC	1 cut(s)	486
BaeGI	GKGCMC	1 cut(s)	668
BalI	TGGCCA	1 cut(s)	605
BamHI	GGATCC	1 cut(s)	356
BanI	GGYRCC	3 cut(s)	703, 794, 837
BanII	GRGCYC	2 cut(s)	244, 668
BauI	CACGAG	1 cut(s)	719
BbsI	GAAGAC	1 cut(s)	221
Bbv12I	GWGCWC	1 cut(s)	244
BbvI	GCAGC	8 cut(s)	54, 216, 309, 483, 505, 577, 889, 892
BccI	CCATC	3 cut(s)	133, 304, 796
BceAI	ACGGC	5 cut(s)	70, 112, 160, 322, 358
BcgI	CGANNNNNNTGC	4 cut(s)	685, 719, 760, 794
BciT130I	CCWGG	2 cut(s)	530, 813
BcnI	CCSGG	3 cut(s)	88, 741, 792
BcoDI	GTCTC	3 cut(s)	126, 323, 435
BfoI	RGCGCY	2 cut(s)	413, 798
BglI	GCCNNNNNGGC	1 cut(s)	803
Bme1390I	CCNGG	5 cut(s)	88, 530, 741, 792, 813
Bme18I	GGWCC	1 cut(s)	486
BmeRI	GACNNNNNGTC	1 cut(s)	448
BmeT110I	CYCGRG	2 cut(s)	392, 430
BmgBI	CACGTC	1 cut(s)	517
BmgT120I	GGNCC	6 cut(s)	486, 523, 664, 665, 737, 754
BmrFI	CCNGG	5 cut(s)	88, 530, 741, 792, 813
BmsI	GCATC	3 cut(s)	633, 864, 865
BpiI	GAAGAC	1 cut(s)	221
BplI	GAGNNNNNCTC	4 cut(s)	413, 445, 653, 685
BpuMI	CCSGG	3 cut(s)	88, 741, 792
BsaHI	GRCGYC	4 cut(s)	113, 149, 195, 795
BsaJI	CCNNGG	6 cut(s)	393, 429, 473, 529, 841, 897
BsaWI	WCCGGW	2 cut(s)	414, 700
BsaXI	ACNNNNNCTCC	3 cut(s)	27, 134, 164
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 344, 366, 397, 531
BseAI	TCCGGA	1 cut(s)	414
BseBI	CCWGG	2 cut(s)	530, 813
BseDI	CCNNGG	6 cut(s)	393, 429, 473, 529, 841, 897
BseGI	GGATG	4 cut(s)	24, 648, 831, 856
BseLI	CCNNNNNNNGG	5 cut(s)	187, 344, 366, 397, 531
BseMII	CTCAG	1 cut(s)	137
BseRI	GAGGAG	6 cut(s)	23, 77, 296, 391, 410, 661
BseSI	GKGCMC	1 cut(s)	668
BseX3I	CGGCCG	1 cut(s)	470
BseXI	GCAGC	8 cut(s)	54, 216, 309, 483, 505, 577, 889, 892
BsgI	GTGCAG	2 cut(s)	482, 701
Bsh1236I	CGCG	4 cut(s)	204, 206, 545, 592
Bsh1285I	CGRYCG	2 cut(s)	99, 473
BshFI	GGCC	7 cut(s)	86, 472, 524, 605, 666, 739, 756
BshNI	GGYRCC	3 cut(s)	703, 794, 837
BsiEI	CGRYCG	2 cut(s)	99, 473
BsiHKAI	GWGCWC	1 cut(s)	244
BsiHKCI	CYCGRG	2 cut(s)	392, 430
BsiSI	CCGG	7 cut(s)	87, 170, 415, 701, 740, 791, 831
BsiWI	CGTACG	1 cut(s)	339
BslI	CCNNNNNNNGG	5 cut(s)	187, 344, 366, 397, 531
BsmAI	GTCTC	3 cut(s)	126, 323, 435
BsmBI	CGTCTC	2 cut(s)	323, 435
BsnI	GGCC	7 cut(s)	86, 472, 524, 605, 666, 739, 756
BsoBI	CYCGRG	2 cut(s)	392, 430
Bsp120I	GGGCCC	1 cut(s)	664
Bsp1286I	GDGCHC	2 cut(s)	244, 668
Bsp13I	TCCGGA	1 cut(s)	414
Bsp143I	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
Bsp19I	CCATGG	2 cut(s)	841, 897
BspANI	GGCC	7 cut(s)	86, 472, 524, 605, 666, 739, 756
BspCNI	CTCAG	1 cut(s)	136
BspEI	TCCGGA	1 cut(s)	414
BspFNI	CGCG	4 cut(s)	204, 206, 545, 592
BspPI	GGATC	5 cut(s)	351, 364, 425, 542, 766
BspT107I	GGYRCC	3 cut(s)	703, 794, 837
BssECI	CCNNGG	6 cut(s)	393, 429, 473, 529, 841, 897
BssMI	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
BssNI	GRCGYC	4 cut(s)	113, 149, 195, 795
BssSI	CACGAG	1 cut(s)	719
BssT1I	CCWWGG	2 cut(s)	841, 897
Bst2BI	CACGAG	1 cut(s)	719
Bst2UI	CCWGG	2 cut(s)	530, 813
Bst4CI	ACNGT	2 cut(s)	187, 220
Bst6I	CTCTTC	1 cut(s)	632
BstACI	GRCGYC	4 cut(s)	113, 149, 195, 795
BstAPI	GCANNNNNTGC	1 cut(s)	715
BstC8I	GCNNGC	4 cut(s)	147, 252, 607, 737
BstDEI	CTNAG	1 cut(s)	123
BstDSI	CCRYGG	2 cut(s)	841, 897
BstF5I	GGATG	4 cut(s)	24, 648, 831, 856
BstFNI	CGCG	4 cut(s)	204, 206, 545, 592
BstH2I	RGCGCY	2 cut(s)	413, 798
BstHHI	GCGC	3 cut(s)	206, 412, 797
BstKTI	GATC	6 cut(s)	99, 109, 359, 420, 537, 774
BstMAI	GTCTC	3 cut(s)	126, 323, 435
BstMBI	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
BstMCI	CGRYCG	2 cut(s)	99, 473
BstNI	CCWGG	2 cut(s)	530, 813
BstNSI	RCATGY	2 cut(s)	763, 920
BstSCI	CCNGG	5 cut(s)	86, 528, 739, 790, 811
BstSLI	GKGCMC	1 cut(s)	668
BstUI	CGCG	4 cut(s)	204, 206, 545, 592
BstV1I	GCAGC	8 cut(s)	54, 216, 309, 483, 505, 577, 889, 892
BstV2I	GAAGAC	1 cut(s)	221
BstX2I	RGATCY	1 cut(s)	356
BstYI	RGATCY	1 cut(s)	356
BstZI	CGGCCG	1 cut(s)	470
BsuRI	GGCC	7 cut(s)	86, 472, 524, 605, 666, 739, 756
BtgI	CCRYGG	2 cut(s)	841, 897
BtrI	CACGTC	1 cut(s)	517
BtsCI	GGATG	4 cut(s)	24, 648, 831, 856
Cac8I	GCNNGC	4 cut(s)	147, 252, 607, 737
CaiI	CAGNNNCTG	1 cut(s)	715
CfoI	GCGC	3 cut(s)	206, 412, 797
Cfr13I	GGNCC	6 cut(s)	486, 523, 664, 665, 737, 754
CseI	GACGC	5 cut(s)	121, 138, 195, 235, 598
Csp6I	GTAC	4 cut(s)	28, 340, 622, 838
CviAII	CATG	8 cut(s)	760, 778, 799, 820, 842, 871, 898, 917
CviQI	GTAC	4 cut(s)	28, 340, 622, 838
DdeI	CTNAG	1 cut(s)	123
DinI	GGCGCC	1 cut(s)	796
DpnI	GATC	6 cut(s)	98, 108, 358, 419, 536, 773
DpnII	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
DrdI	GACNNNNNNGTC	1 cut(s)	118
DriI	GACNNNNNGTC	1 cut(s)	448
DseDI	GACNNNNNNGTC	1 cut(s)	118
EaeI	YGGCCR	2 cut(s)	470, 603
EagI	CGGCCG	1 cut(s)	470
Eam1104I	CTCTTC	1 cut(s)	632
Eam1105I	GACNNNNNGTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	632
EciI	GGCGGA	2 cut(s)	416, 453
Ecl136II	GAGCTC	1 cut(s)	242
EclXI	CGGCCG	1 cut(s)	470
Eco130I	CCWWGG	2 cut(s)	841, 897
Eco24I	GRGCYC	2 cut(s)	244, 668
Eco47I	GGWCC	1 cut(s)	486
Eco52I	CGGCCG	1 cut(s)	470
Eco53kI	GAGCTC	1 cut(s)	242
Eco88I	CYCGRG	2 cut(s)	392, 430
EcoICRI	GAGCTC	1 cut(s)	242
EcoO109I	RGGNCCY	2 cut(s)	664, 665
EcoRI	GAATTC	1 cut(s)	424
EcoRII	CCWGG	2 cut(s)	528, 811
EcoT14I	CCWWGG	2 cut(s)	841, 897
EcoT38I	GRGCYC	2 cut(s)	244, 668
EgeI	GGCGCC	1 cut(s)	796
EheI	GGCGCC	1 cut(s)	796
ErhI	CCWWGG	2 cut(s)	841, 897
Esp3I	CGTCTC	2 cut(s)	323, 435
FaeI	CATG	8 cut(s)	763, 781, 802, 823, 845, 874, 901, 920
FatI	CATG	8 cut(s)	759, 777, 798, 819, 841, 870, 897, 916
FauI	CCCGC	6 cut(s)	341, 498, 690, 728, 795, 827
FblI	GTMKAC	1 cut(s)	224
FokI	GGATG	4 cut(s)	31, 655, 838, 843
FriOI	GRGCYC	2 cut(s)	244, 668
GlaI	GCGC	3 cut(s)	205, 411, 796
HaeII	RGCGCY	2 cut(s)	413, 798
HaeIII	GGCC	7 cut(s)	86, 472, 524, 605, 666, 739, 756
HapII	CCGG	7 cut(s)	87, 170, 415, 701, 740, 791, 831
HgaI	GACGC	5 cut(s)	121, 138, 195, 235, 598
HhaI	GCGC	3 cut(s)	206, 412, 797
Hin1I	GRCGYC	4 cut(s)	113, 149, 195, 795
Hin1II	CATG	8 cut(s)	763, 781, 802, 823, 845, 874, 901, 920
Hin6I	GCGC	3 cut(s)	204, 410, 795
HinP1I	GCGC	3 cut(s)	204, 410, 795
HincII	GTYRAC	2 cut(s)	199, 225
HindII	GTYRAC	2 cut(s)	199, 225
HinfI	GANTC	8 cut(s)	133, 362, 404, 627, 697, 712, 722, 851
HpaII	CCGG	7 cut(s)	87, 170, 415, 701, 740, 791, 831
HphI	GGTGA	1 cut(s)	25
Hpy166II	GTNNAC	5 cut(s)	193, 199, 225, 486, 514
Hpy188I	TCNGA	6 cut(s)	76, 96, 111, 138, 361, 679
Hpy188III	TCNNGA	3 cut(s)	415, 421, 538
Hpy8I	GTNNAC	5 cut(s)	193, 199, 225, 486, 514
Hpy99I	CGWCG	8 cut(s)	56, 62, 154, 211, 229, 265, 305, 454
HpyAV	CCTTC	4 cut(s)	26, 347, 575, 870
HpyCH4III	ACNGT	2 cut(s)	187, 220
HpyCH4IV	ACGT	3 cut(s)	195, 516, 576
HpyCH4V	TGCA	6 cut(s)	499, 565, 616, 646, 718, 877
HpyF3I	CTNAG	1 cut(s)	123
HpySE526I	ACGT	3 cut(s)	195, 516, 576
Hsp92I	GRCGYC	4 cut(s)	113, 149, 195, 795
Hsp92II	CATG	8 cut(s)	763, 781, 802, 823, 845, 874, 901, 920
HspAI	GCGC	3 cut(s)	204, 410, 795
KasI	GGCGCC	1 cut(s)	794
Kpn2I	TCCGGA	1 cut(s)	414
KpnI	GGTACC	1 cut(s)	841
Kzo9I	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
LmnI	GCTCC	7 cut(s)	142, 172, 239, 319, 334, 417, 928
Lsp1109I	GCAGC	8 cut(s)	54, 216, 309, 483, 505, 577, 889, 892
LweI	GCATC	3 cut(s)	633, 864, 865
MaeII	ACGT	3 cut(s)	195, 516, 576
MaeIII	GTNAC	2 cut(s)	743, 815
MalI	GATC	6 cut(s)	98, 108, 358, 419, 536, 773
MboI	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
MboII	GAAGA	2 cut(s)	226, 649
MflI	RGATCY	1 cut(s)	356
MhlI	GDGCHC	2 cut(s)	244, 668
MlsI	TGGCCA	1 cut(s)	605
MluCI	AATT	1 cut(s)	424
MluI	ACGCGT	1 cut(s)	590
MluNI	TGGCCA	1 cut(s)	605
Mly113I	GGCGCC	1 cut(s)	795
MlyI	GAGTC	5 cut(s)	621, 691, 721, 731, 860
MmeI	TCCRAC	2 cut(s)	681, 702
Mox20I	TGGCCA	1 cut(s)	605
MroI	TCCGGA	1 cut(s)	414
MscI	TGGCCA	1 cut(s)	605
MslI	CAYNNNNRTG	2 cut(s)	188, 824
Msp20I	TGGCCA	1 cut(s)	605
MspA1I	CMGCKG	4 cut(s)	45, 118, 496, 568
MspI	CCGG	7 cut(s)	87, 170, 415, 701, 740, 791, 831
MspR9I	CCNGG	5 cut(s)	88, 530, 741, 792, 813
MvaI	CCWGG	2 cut(s)	530, 813
MvnI	CGCG	4 cut(s)	204, 206, 545, 592
NarI	GGCGCC	1 cut(s)	795
NciI	CCSGG	3 cut(s)	88, 741, 792
NcoI	CCATGG	2 cut(s)	841, 897
NdeII	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
NlaIII	CATG	8 cut(s)	763, 781, 802, 823, 845, 874, 901, 920
NmeAIII	GCCGAG	1 cut(s)	498
NmuCI	GTSAC	1 cut(s)	743
NspI	RCATGY	2 cut(s)	763, 920
OliI	CACNNNNGTG	1 cut(s)	188
PciI	ACATGT	1 cut(s)	916
PcsI	WCGNNNNNNNCGW	3 cut(s)	173, 371, 860
PfeI	GAWTC	3 cut(s)	133, 362, 404
Pfl23II	CGTACG	1 cut(s)	339
PflFI	GACNNNGTC	1 cut(s)	220
Ple19I	CGATCG	1 cut(s)	99
PleI	GAGTC	5 cut(s)	621, 691, 720, 730, 859
PluTI	GGCGCC	1 cut(s)	798
PpsI	GAGTC	5 cut(s)	621, 691, 720, 730, 859
PscI	ACATGT	1 cut(s)	916
Psp124BI	GAGCTC	1 cut(s)	244
Psp6I	CCWGG	2 cut(s)	528, 811
PspGI	CCWGG	2 cut(s)	528, 811
PspLI	CGTACG	1 cut(s)	339
PspOMI	GGGCCC	1 cut(s)	664
PspPI	GGNCC	6 cut(s)	486, 523, 664, 665, 737, 754
PsrI	GAACNNNNNNTAC	2 cut(s)	830, 862
PstNI	CAGNNNCTG	1 cut(s)	715
PsuI	RGATCY	1 cut(s)	356
PsyI	GACNNNGTC	1 cut(s)	220
PvuI	CGATCG	1 cut(s)	99
PvuII	CAGCTG	2 cut(s)	496, 568
RsaI	GTAC	4 cut(s)	29, 341, 623, 839
RsaNI	GTAC	4 cut(s)	28, 340, 622, 838
RseI	CAYNNNNRTG	2 cut(s)	188, 824
SacI	GAGCTC	1 cut(s)	244
SalI	GTCGAC	1 cut(s)	223
Sau3AI	GATC	6 cut(s)	96, 106, 356, 417, 534, 771
Sau96I	GGNCC	6 cut(s)	486, 523, 664, 665, 737, 754
SchI	GAGTC	5 cut(s)	621, 691, 721, 731, 860
ScrFI	CCNGG	5 cut(s)	88, 530, 741, 792, 813
SduI	GDGCHC	2 cut(s)	244, 668
SfaNI	GCATC	3 cut(s)	633, 864, 865
SfoI	GGCGCC	1 cut(s)	796
SinI	GGWCC	1 cut(s)	486
SmiMI	CAYNNNNRTG	2 cut(s)	188, 824
Sse9I	AATT	1 cut(s)	424
SspDI	GGCGCC	1 cut(s)	794
SstI	GAGCTC	1 cut(s)	244
StyD4I	CCNGG	5 cut(s)	86, 528, 739, 790, 811
StyI	CCWWGG	2 cut(s)	841, 897
TaaI	ACNGT	2 cut(s)	187, 220
TaiI	ACGT	3 cut(s)	198, 519, 579
TaqI	TCGA	9 cut(s)	224, 263, 279, 365, 374, 420, 695, 770, 849
TasI	AATT	1 cut(s)	424
TauI	GCSGC	9 cut(s)	42, 48, 51, 118, 183, 348, 438, 472, 709
TfiI	GAWTC	3 cut(s)	133, 362, 404
TseFI	GTSAC	1 cut(s)	743
TseI	GCWGC	8 cut(s)	42, 229, 297, 493, 496, 565, 877, 880
Tsp45I	GTSAC	1 cut(s)	743
TspDTI	ATGAA	1 cut(s)	587
TspGWI	ACGGA	1 cut(s)	347
Tth111I	GACNNNGTC	1 cut(s)	220
VpaK11BI	GGWCC	1 cut(s)	486
XapI	RAATTY	1 cut(s)	424
XceI	RCATGY	2 cut(s)	763, 920
XmiI	GTMKAC	1 cut(s)	224
ZraI	GACGTC	1 cut(s)	196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.