Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0011058

Physical Location & Seq

Genomic Coordinates Reverse (-)

14041061 .. 14043782

Gene Structure 2722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGCTTCGTACCAAAAACCCTTGTGGGAAAGTGTCAAACCAACTGTACTTGACCATGGATGATCTTGCCGATCAGTTTGGAATTGGTACCCTTCGTTTGACCACAAGACAAACGTTTCAGCTCCATGGGGTTCTGAAAAAGGATCTAAAGACTGTAATGAGTAGTATCATTAGAAGCATGGGTTCAACTCTTGGCGCCTGTGGCGATCTTAACAGAAATGTTCTTGCTCCTCCTGCTCCAATACAAAGAAAGGATTACCTTTGCGCACAGCAGACTGCAGAGAACATTGCAGCATTGCTGACTCCACAGTCTGGATTTTACTATGATGTGTGGGTGGATGGAGAGAAGTTCCTGACCGCAGAGCCTCCTGAAGTAACAAAGGCCCGCAATGATAATACTCATGGAACAAACTTCCCTGATTCACCCGAGCCCATTTATGGAACTCAGTTCTTGCCCAGGAAGTTTAAAGTTGCAGTTACGGTGCCAACAGACAACTCGGTGGATATTCTCACAAATGATATTGGGGTTGTGGTCGTTACTGATGATAACGGGGAGCCTCAAGGGTTCAACCTATATGTTGGTGGTGGTATGGGAAGGACACATAGGATGGAATCCACTTTTCCCCGTCTGGCTGAGCCATTGGGTTATGTCCCTAAAGAGGATATCCTATATGCCATTAAGGCTATAGTTGTTACACAACGTGAAAATGGGAGAAGAGATGATCGGAGGTATAGTAGAATGAAATATTTGATCAGCTCATGGGGGATTGAAAAGTTCAGAAGTGTAGTGGAACAGTATTACGGAAAGAAATTTGAGCCTTTCCGTGAGTTGCCGGAGTGGGAATTCAAAAGTCACTTGGGATGGCACAAGCAGGGTGATGGCAGTTATTATTGTGGGCTTCATGTCGATAATGGTCGGATTGGGGGAGTTATGAAGCAGGCATTAAGAGAGGTTATAGAAAAGTATAATTTGAGTATAAGGCTCACACCAAACCAGAACATCATATTATGTGATATTCGCAGTGCATGGAAGCGTCCCATCACCACAGTTCTTGCAAAAGCCGGGCTGCTGCATCCTAGGTTTGTAGACCCCCTCAACTTAACTGCCATGGCATGCCCAGCCTTCCCACTATGCCCACTGGCAATAACTGAAGCTGAACGAGGTATACCTGACATTCTTAAGCGGGTTCGAGCAGTATTTGAGAAGGTTGGTTTGAAGTACAATGAATCAGTAGTAATAAGGATTACTGGATGCCCTAATGGTTGTGCTAGGCCCTACATGGCTGAACTTGGACTAGTTGGTGATGGTCCAAATAGCTATCAGATCTGGCTTGGAGGAACACCCAATCAAACCTCAATCGCAAAATCCTTCATGAACAAGGTCAAGGTTCAAGACCTTGAAAAGGTTTTCGAACCTTTGTTTTATTACTGGAAACGTAAGCGACAATCTAAAGAGTCATTCGGCGACTTCACAAACCGCTTGGGATTTGAAAAACTTCAAGAGTTGGTTGACAAATGGGAAGGTCCAGAGGCTTCACCAGCACGTTACAACCTGAAACTTTTTGCTGATAAGGAGACGTATGAAGCTGTGGATAAGCTTGCAAAGCTGCAGAATAAGAATGCTCACCAGTTAGCAATGGAAGTTATTCGCAATTTTGTTGTTTCCCAGAAAAATGGGAAAAGCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005507 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006275 GO:0006323 GO:0006355 GO:0006790 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009295 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009889 GO:0009890 GO:0009892 GO:0009941 GO:0009987 GO:0010319 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016002 GO:0016020 GO:0016043 GO:0016491 GO:0016667 GO:0016673 GO:0019219 GO:0019222 GO:0019418 GO:0019419 GO:0019424 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031975 GO:0036385 GO:0042644 GO:0042646 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0046872 GO:0046914 GO:0048046 GO:0048519 GO:0048523 GO:0050311 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0055114 GO:0060255 GO:0065007 GO:0071103 GO:0071840 GO:0080090 GO:0097159 GO:1900160 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00920 ko01100 ko01120 map00920 map01100 map01120

Pfam Domains

Protein Families

NIR_SIR NIR_SIR_ferr

Protein Analysis

563

Amino Acids

63.53

Weight (kDa)

9.15

Isoelectric Point (pI)

38.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NIR_SIR_ferr	PF03460	1 - 55	2.4e-13	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	96 - 271	1.8e-42	Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr	PF03460	289 - 341	1.2e-12	Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR	PF01077	368 - 505	3.1e-11	Nitrite and sulphite reductase 4Fe-4S domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04590
fragaria_vesca	FvH4_3g28720 FvH4_3g28720 FvH4_3g28720 FvH4_3g28720
malus_domestica	MD03G1173800.v1.1 MD11G1192000.v1.1
prunus_persica	Prupe.4G250500_v2.0.a1
pyrus_communis	pycom03g13140 pycom11g16770
rosa_chinensis	RchiOBHm_Chr5g0052341
rosa_laevigata	RLG00000034823
rosa_multiflora	Rmu_sc0000968.1_g000009
rosa_roxburghii	Rroxscaffold_1G00028250
rosa_rugosa	Rorug05G0272600
rosa_samantha	Rh5AG345200 Rh5BG356300 Rh5CG381600 Rh5DG371400
rosa_wichuraiana	Rw5G032580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	307
Acc16I	TGCGCA	1 cut(s)	265
Acc65I	GGTACC	1 cut(s)	86
AccB1I	GGYRCC	3 cut(s)	86, 194, 481
AccB7I	CCANNNNNTGG	1 cut(s)	311
AccI	GTMKAC	2 cut(s)	1086, 1165
AciI	CCGC	4 cut(s)	357, 385, 1183, 1477
AclI	AACGTT	1 cut(s)	113
AclWI	GGATC	1 cut(s)	150
AcsI	RAATTY	2 cut(s)	809, 842
AcuI	CTGAAG	2 cut(s)	390, 1170
AcyI	GRCGYC	1 cut(s)	195
AdeI	CACNNNGTG	1 cut(s)	701
AfaI	GTAC	4 cut(s)	10, 47, 88, 1220
AfiI	CCNNNNNNNGG	4 cut(s)	311, 437, 658, 1402
AflII	CTTAAG	1 cut(s)	1178
AgsI	TTSAA	9 cut(s)	186, 568, 770, 847, 1216, 1391, 1400, 1490, 1499
AhlI	ACTAGT	1 cut(s)	1294
AjnI	CCWGG	1 cut(s)	455
AluBI	AGCT	7 cut(s)	121, 756, 1154, 1317, 1586, 1597, 1606
AluI	AGCT	7 cut(s)	121, 756, 1154, 1317, 1586, 1597, 1606
Alw26I	GTCTC	1 cut(s)	1568
AlwI	GGATC	1 cut(s)	150
Ama87I	CYCGRG	1 cut(s)	425
AoxI	GGCC	2 cut(s)	381, 1271
ApeKI	GCWGC	4 cut(s)	290, 1066, 1069, 1606
ApoI	RAATTY	2 cut(s)	809, 842
Asp700I	GAANNNNTTC	2 cut(s)	1494, 1644
Asp718I	GGTACC	1 cut(s)	86
AspA2I	CCTAGG	1 cut(s)	1076
AspLEI	GCGC	2 cut(s)	197, 266
AspS9I	GGNCC	4 cut(s)	382, 1272, 1307, 1523
AsuC2I	CCSGG	1 cut(s)	1063
AsuHPI	GGTGA	6 cut(s)	414, 887, 1033, 1313, 1527, 1616
AsuII	TTCGAA	1 cut(s)	1410
AvaI	CYCGRG	1 cut(s)	425
AvaII	GGWCC	2 cut(s)	1307, 1523
AvrII	CCTAGG	1 cut(s)	1076
BanI	GGYRCC	3 cut(s)	86, 194, 481
BanII	GRGCYC	1 cut(s)	432
BbvI	GCAGC	4 cut(s)	302, 1053, 1056, 1593
BccI	CCATC	6 cut(s)	332, 601, 855, 872, 1046, 1298
BciT130I	CCWGG	1 cut(s)	457
BclI	TGATCA	1 cut(s)	750
BcnI	CCSGG	1 cut(s)	1063
BcoDI	GTCTC	1 cut(s)	1568
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	3 cut(s)	1077, 1269, 1295
BfmI	CTRYAG	3 cut(s)	276, 684, 1607
BfoI	RGCGCY	1 cut(s)	198
BfrI	CTTAAG	1 cut(s)	1178
BglI	GCCNNNNNGGC	1 cut(s)	680
BglII	AGATCT	1 cut(s)	1323
BisI	GCNGC	4 cut(s)	291, 1067, 1070, 1607
BlnI	CCTAGG	1 cut(s)	1076
BlpI	GCTNAGC	1 cut(s)	633
BlsI	GCNGC	4 cut(s)	292, 1068, 1071, 1608
Bme1390I	CCNGG	2 cut(s)	457, 1063
Bme18I	GGWCC	2 cut(s)	1307, 1523
BmeT110I	CYCGRG	1 cut(s)	425
BmgT120I	GGNCC	4 cut(s)	382, 1272, 1307, 1523
BmiI	GGNNCC	4 cut(s)	88, 196, 483, 555
BmrFI	CCNGG	2 cut(s)	457, 1063
BmsI	GCATC	2 cut(s)	1081, 1241
Bpu1102I	GCTNAGC	1 cut(s)	633
Bpu14I	TTCGAA	1 cut(s)	1410
BpuEI	CTTGAG	1 cut(s)	543
BpuMI	CCSGG	1 cut(s)	1063
BsaHI	GRCGYC	1 cut(s)	195
BsaJI	CCNNGG	5 cut(s)	54, 124, 455, 1076, 1107
BsaXI	ACNNNNNCTCC	2 cut(s)	718, 748
Bsc4I	CCNNNNNNNGG	4 cut(s)	311, 437, 658, 1402
Bse1I	ACTGG	4 cut(s)	1143, 1252, 1433, 1627
Bse3DI	GCAATG	4 cut(s)	285, 293, 394, 1641
BseBI	CCWGG	1 cut(s)	457
BseDI	CCNNGG	5 cut(s)	54, 124, 455, 1076, 1107
BseGI	GGATG	6 cut(s)	64, 343, 612, 866, 1072, 1256
BseLI	CCNNNNNNNGG	4 cut(s)	311, 437, 658, 1402
BseMI	GCAATG	4 cut(s)	285, 293, 394, 1641
BseMII	CTCAG	2 cut(s)	458, 624
BseNI	ACTGG	4 cut(s)	1143, 1252, 1433, 1627
BseRI	GAGGAG	1 cut(s)	219
BseXI	GCAGC	4 cut(s)	302, 1053, 1056, 1593
BseYI	CCCAGC	1 cut(s)	1117
BshFI	GGCC	2 cut(s)	383, 1273
BshNI	GGYRCC	3 cut(s)	86, 194, 481
BsiHKCI	CYCGRG	1 cut(s)	425
BsiSI	CCGG	2 cut(s)	833, 1062
BslFI	GGGAC	2 cut(s)	635, 1020
BslI	CCNNNNNNNGG	4 cut(s)	311, 437, 658, 1402
BsmAI	GTCTC	1 cut(s)	1568
BsmBI	CGTCTC	1 cut(s)	1568
BsmFI	GGGAC	2 cut(s)	635, 1020
BsmI	GAATGC	1 cut(s)	1624
BsnI	GGCC	2 cut(s)	383, 1273
BsoBI	CYCGRG	1 cut(s)	425
Bsp119I	TTCGAA	1 cut(s)	1410
Bsp1286I	GDGCHC	1 cut(s)	432
Bsp143I	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
Bsp1720I	GCTNAGC	1 cut(s)	633
Bsp19I	CCATGG	3 cut(s)	54, 124, 1107
BspACI	CCGC	4 cut(s)	357, 385, 1183, 1477
BspANI	GGCC	2 cut(s)	383, 1273
BspCNI	CTCAG	2 cut(s)	457, 625
BspHI	TCATGA	1 cut(s)	1371
BspLI	GGNNCC	4 cut(s)	88, 196, 483, 555
BspMAI	CTGCAG	2 cut(s)	280, 1611
BspPI	GGATC	1 cut(s)	150
BspT104I	TTCGAA	1 cut(s)	1410
BspT107I	GGYRCC	3 cut(s)	86, 194, 481
BspTI	CTTAAG	1 cut(s)	1178
BsrDI	GCAATG	4 cut(s)	285, 293, 394, 1641
BsrI	ACTGG	4 cut(s)	1143, 1252, 1433, 1627
BssECI	CCNNGG	5 cut(s)	54, 124, 455, 1076, 1107
BssMI	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
BssNAI	GTATAC	1 cut(s)	1166
BssNI	GRCGYC	1 cut(s)	195
BssT1I	CCWWGG	4 cut(s)	54, 124, 1076, 1107
Bst1107I	GTATAC	1 cut(s)	1166
Bst2UI	CCWGG	1 cut(s)	457
Bst4CI	ACNGT	6 cut(s)	45, 154, 309, 481, 795, 1048
Bst6I	CTCTTC	1 cut(s)	709
BstACI	GRCGYC	1 cut(s)	195
BstAFI	CTTAAG	1 cut(s)	1178
BstBI	TTCGAA	1 cut(s)	1410
BstC8I	GCNNGC	4 cut(s)	385, 939, 1114, 1599
BstDEI	CTNAG	2 cut(s)	444, 633
BstDSI	CCRYGG	3 cut(s)	54, 124, 1107
BstENI	CCTNNNNNAGG	1 cut(s)	1400
BstF5I	GGATG	6 cut(s)	64, 343, 612, 866, 1072, 1256
BstH2I	RGCGCY	1 cut(s)	198
BstHHI	GCGC	2 cut(s)	197, 266
BstKTI	GATC	7 cut(s)	64, 73, 145, 208, 724, 753, 1326
BstMAI	GTCTC	1 cut(s)	1568
BstMBI	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
BstMWI	GCNNNNNNNGC	6 cut(s)	201, 233, 680, 1118, 1538, 1603
BstNI	CCWGG	1 cut(s)	457
BstNSI	RCATGY	1 cut(s)	1116
BstSCI	CCNGG	2 cut(s)	455, 1061
BstSFI	CTRYAG	3 cut(s)	276, 684, 1607
BstV1I	GCAGC	4 cut(s)	302, 1053, 1056, 1593
BstX2I	RGATCY	2 cut(s)	142, 1323
BstXI	CCANNNNNNTGG	1 cut(s)	1673
BstYI	RGATCY	2 cut(s)	142, 1323
BstZ17I	GTATAC	1 cut(s)	1166
BsuRI	GGCC	2 cut(s)	383, 1273
BtgI	CCRYGG	3 cut(s)	54, 124, 1107
BtsCI	GGATG	6 cut(s)	64, 343, 612, 866, 1072, 1256
BtsI	GCAGTG	1 cut(s)	1027
BtsIMutI	CAGTG	2 cut(s)	1027, 1136
Cac8I	GCNNGC	4 cut(s)	385, 939, 1114, 1599
CciI	TCATGA	1 cut(s)	1371
CfoI	GCGC	2 cut(s)	197, 266
Cfr13I	GGNCC	4 cut(s)	382, 1272, 1307, 1523
CseI	GACGC	1 cut(s)	1022
Csp6I	GTAC	4 cut(s)	9, 46, 87, 1219
CspCI	CAANNNNNGTGG	2 cut(s)	1033, 1068
CviQI	GTAC	4 cut(s)	9, 46, 87, 1219
DdeI	CTNAG	2 cut(s)	444, 633
DinI	GGCGCC	1 cut(s)	196
DpnI	GATC	7 cut(s)	63, 72, 144, 207, 723, 752, 1325
DpnII	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
DraI	TTTAAA	1 cut(s)	466
DraIII	CACNNNGTG	1 cut(s)	701
DrdI	GACNNNNNNGTC	1 cut(s)	307
DseDI	GACNNNNNNGTC	1 cut(s)	307
Eam1104I	CTCTTC	1 cut(s)	709
EarI	CTCTTC	1 cut(s)	709
Eco130I	CCWWGG	4 cut(s)	54, 124, 1076, 1107
Eco24I	GRGCYC	1 cut(s)	432
Eco32I	GATATC	1 cut(s)	664
Eco47I	GGWCC	2 cut(s)	1307, 1523
Eco57I	CTGAAG	2 cut(s)	390, 1170
Eco88I	CYCGRG	1 cut(s)	425
EcoNI	CCTNNNNNAGG	1 cut(s)	1400
EcoO109I	RGGNCCY	1 cut(s)	1272
EcoRI	GAATTC	1 cut(s)	842
EcoRII	CCWGG	1 cut(s)	455
EcoRV	GATATC	1 cut(s)	664
EcoT14I	CCWWGG	4 cut(s)	54, 124, 1076, 1107
EcoT38I	GRGCYC	1 cut(s)	432
EgeI	GGCGCC	1 cut(s)	196
EheI	GGCGCC	1 cut(s)	196
ErhI	CCWWGG	4 cut(s)	54, 124, 1076, 1107
Esp3I	CGTCTC	1 cut(s)	1568
FaqI	GGGAC	2 cut(s)	635, 1020
FauI	CCCGC	2 cut(s)	392, 1176
FbaI	TGATCA	1 cut(s)	750
FblI	GTMKAC	2 cut(s)	1086, 1165
Fnu4HI	GCNGC	4 cut(s)	291, 1067, 1070, 1607
FokI	GGATG	6 cut(s)	71, 350, 619, 873, 1059, 1263
FriOI	GRGCYC	1 cut(s)	432
Fsp4HI	GCNGC	4 cut(s)	291, 1067, 1070, 1607
FspBI	CTAG	3 cut(s)	1077, 1269, 1295
FspI	TGCGCA	1 cut(s)	265
GlaI	GCGC	2 cut(s)	196, 265
GluI	GCNGC	4 cut(s)	291, 1067, 1070, 1607
GsaI	CCCAGC	1 cut(s)	1121
HaeII	RGCGCY	1 cut(s)	198
HaeIII	GGCC	2 cut(s)	383, 1273
HapII	CCGG	2 cut(s)	833, 1062
HgaI	GACGC	1 cut(s)	1022
HhaI	GCGC	2 cut(s)	197, 266
Hin1I	GRCGYC	1 cut(s)	195
Hin6I	GCGC	2 cut(s)	195, 264
HinP1I	GCGC	2 cut(s)	195, 264
HincII	GTYRAC	1 cut(s)	1510
HindII	GTYRAC	1 cut(s)	1510
HindIII	AAGCTT	1 cut(s)	1595
HinfI	GANTC	5 cut(s)	301, 419, 611, 1226, 1454
HpaII	CCGG	2 cut(s)	833, 1062
HphI	GGTGA	6 cut(s)	414, 887, 1033, 1313, 1527, 1616
Hpy166II	GTNNAC	3 cut(s)	1087, 1166, 1510
Hpy188I	TCNGA	5 cut(s)	135, 726, 779, 918, 1323
Hpy188III	TCNNGA	7 cut(s)	312, 352, 368, 1372, 1391, 1499, 1526
Hpy8I	GTNNAC	3 cut(s)	1087, 1166, 1510
HpyAV	CCTTC	6 cut(s)	101, 588, 1132, 1198, 1378, 1514
HpyCH4III	ACNGT	6 cut(s)	45, 154, 309, 481, 795, 1048
HpyCH4IV	ACGT	5 cut(s)	113, 700, 1435, 1543, 1577
HpyCH4V	TGCA	8 cut(s)	278, 290, 473, 1025, 1055, 1072, 1601, 1609
HpyF10VI	GCNNNNNNNGC	6 cut(s)	201, 233, 680, 1118, 1538, 1603
HpyF3I	CTNAG	2 cut(s)	444, 633
HpySE526I	ACGT	5 cut(s)	113, 700, 1435, 1543, 1577
Hsp92I	GRCGYC	1 cut(s)	195
HspAI	GCGC	2 cut(s)	195, 264
KasI	GGCGCC	1 cut(s)	194
KpnI	GGTACC	1 cut(s)	90
Ksp22I	TGATCA	1 cut(s)	750
Kzo9I	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
LmnI	GCTCC	4 cut(s)	126, 232, 241, 553
Lsp1109I	GCAGC	4 cut(s)	302, 1053, 1056, 1593
LweI	GCATC	2 cut(s)	1081, 1241
MaeI	CTAG	3 cut(s)	1077, 1269, 1295
MaeII	ACGT	5 cut(s)	113, 700, 1435, 1543, 1577
MaeIII	GTNAC	6 cut(s)	373, 475, 535, 691, 851, 1544
MalI	GATC	7 cut(s)	63, 72, 144, 207, 723, 752, 1325
MboI	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
MboII	GAAGA	1 cut(s)	726
MflI	RGATCY	2 cut(s)	142, 1323
MhlI	GDGCHC	1 cut(s)	432
MluCI	AATT	5 cut(s)	81, 809, 842, 967, 1651
Mly113I	GGCGCC	1 cut(s)	195
MlyI	GAGTC	2 cut(s)	295, 1463
MmeI	TCCRAC	1 cut(s)	896
MroXI	GAANNNNTTC	2 cut(s)	1494, 1644
MseI	TTAA	6 cut(s)	210, 465, 678, 944, 1100, 1179
MspCI	CTTAAG	1 cut(s)	1178
MspI	CCGG	2 cut(s)	833, 1062
MspR9I	CCNGG	2 cut(s)	457, 1063
Mva1269I	GAATGC	1 cut(s)	1624
MvaI	CCWGG	1 cut(s)	457
MwoI	GCNNNNNNNGC	6 cut(s)	201, 233, 680, 1118, 1538, 1603
NarI	GGCGCC	1 cut(s)	195
NciI	CCSGG	1 cut(s)	1063
NcoI	CCATGG	3 cut(s)	54, 124, 1107
NdeII	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
NlaIV	GGNNCC	4 cut(s)	88, 196, 483, 555
NmuCI	GTSAC	1 cut(s)	851
NsbI	TGCGCA	1 cut(s)	265
NspI	RCATGY	1 cut(s)	1116
NspV	TTCGAA	1 cut(s)	1410
PaeI	GCATGC	1 cut(s)	1116
PagI	TCATGA	1 cut(s)	1371
PctI	GAATGC	1 cut(s)	1624
PdmI	GAANNNNTTC	2 cut(s)	1494, 1644
PfeI	GAWTC	3 cut(s)	419, 611, 1226
PflMI	CCANNNNNTGG	1 cut(s)	311
PkrI	GCNGC	4 cut(s)	292, 1068, 1071, 1608
PleI	GAGTC	2 cut(s)	295, 1462
PluTI	GGCGCC	1 cut(s)	198
PpsI	GAGTC	2 cut(s)	295, 1462
Psp1406I	AACGTT	1 cut(s)	113
Psp6I	CCWGG	1 cut(s)	455
PspFI	CCCAGC	1 cut(s)	1117
PspGI	CCWGG	1 cut(s)	455
PspN4I	GGNNCC	4 cut(s)	88, 196, 483, 555
PspPI	GGNCC	4 cut(s)	382, 1272, 1307, 1523
PsrI	GAACNNNNNNTAC	2 cut(s)	1149, 1181
PstI	CTGCAG	2 cut(s)	280, 1611
PsuI	RGATCY	2 cut(s)	142, 1323
RsaI	GTAC	4 cut(s)	10, 47, 88, 1220
RsaNI	GTAC	4 cut(s)	9, 46, 87, 1219
SaqAI	TTAA	6 cut(s)	210, 465, 678, 944, 1100, 1179
SatI	GCNGC	4 cut(s)	291, 1067, 1070, 1607
Sau3AI	GATC	7 cut(s)	61, 70, 142, 205, 721, 750, 1323
Sau96I	GGNCC	4 cut(s)	382, 1272, 1307, 1523
SchI	GAGTC	2 cut(s)	295, 1463
ScrFI	CCNGG	2 cut(s)	457, 1063
SduI	GDGCHC	1 cut(s)	432
SfaNI	GCATC	2 cut(s)	1081, 1241
SfcI	CTRYAG	3 cut(s)	276, 684, 1607
SfoI	GGCGCC	1 cut(s)	196
SfuI	TTCGAA	1 cut(s)	1410
SinI	GGWCC	2 cut(s)	1307, 1523
SmlI	CTYRAG	2 cut(s)	558, 1178
SmoI	CTYRAG	2 cut(s)	558, 1178
SpeI	ACTAGT	1 cut(s)	1294
SphI	GCATGC	1 cut(s)	1116
Sse9I	AATT	5 cut(s)	81, 809, 842, 967, 1651
SsiI	CCGC	4 cut(s)	357, 385, 1183, 1477
SspDI	GGCGCC	1 cut(s)	194
SspI	AATATT	1 cut(s)	746
SspMI	CTAG	3 cut(s)	1077, 1269, 1295
StyD4I	CCNGG	2 cut(s)	455, 1061
StyI	CCWWGG	4 cut(s)	54, 124, 1076, 1107
TaaI	ACNGT	6 cut(s)	45, 154, 309, 481, 795, 1048
TaiI	ACGT	5 cut(s)	116, 703, 1438, 1546, 1580
TaqI	TCGA	3 cut(s)	906, 1189, 1410
TasI	AATT	5 cut(s)	81, 809, 842, 967, 1651
TatI	WGTACW	2 cut(s)	45, 1218
TfiI	GAWTC	3 cut(s)	419, 611, 1226
Tru1I	TTAA	6 cut(s)	210, 465, 678, 944, 1100, 1179
Tru9I	TTAA	6 cut(s)	210, 465, 678, 944, 1100, 1179
TscAI	CASTG	2 cut(s)	1027, 1143
TseFI	GTSAC	1 cut(s)	851
TseI	GCWGC	4 cut(s)	290, 1066, 1069, 1606
Tsp45I	GTSAC	1 cut(s)	851
TspDTI	ATGAA	7 cut(s)	755, 890, 947, 1239, 1360, 1388, 1596
TspGWI	ACGGA	2 cut(s)	812, 816
TspRI	CASTG	2 cut(s)	1027, 1143
Van91I	CCANNNNNTGG	1 cut(s)	311
Vha464I	CTTAAG	1 cut(s)	1178
VpaK11BI	GGWCC	2 cut(s)	1307, 1523
XagI	CCTNNNNNAGG	1 cut(s)	1400
XapI	RAATTY	2 cut(s)	809, 842
XceI	RCATGY	1 cut(s)	1116
XmaJI	CCTAGG	1 cut(s)	1076
XmiI	GTMKAC	2 cut(s)	1086, 1165
XmnI	GAANNNNTTC	2 cut(s)	1494, 1644
XspI	CTAG	3 cut(s)	1077, 1269, 1295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.