Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0009479

Physical Location & Seq

Genomic Coordinates Forward (+)

17008566 .. 17011590

Gene Structure 3025 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g15780.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGCAGCAGCAGCCTCCGGTAGCGCCTCCACCACTTGCAAAACCCACCGCCTTATCGCCTCGCCGCTCCCAAAACCCTACTCCACCTCCTCCACCCAACTTCCCTTCAAGTTTACCTCCCGCGCCACCGCTGCCCCTACATCCATCTCCTGCAGTCTCACCCGGGATTCGGCCGCTCTTCAGATGGATGACAAGAACGATAACGGCGCCTTCCCGGTTCTTCCCCGGCCCGATTCGTTTGGCCGGTTCGGCAAGTATGGCGGGAAGTACGTCCCCGAGACCCTAATGCACGCGCTCGCTGAGCTCGAGGCCGCGTTTCACGCTCTCGCTAATGACGAAGAGTTTCAGAAAGAGTTGAATGGCATTTTGAAGGACTATGTTGGGAGGGAAACTCCTCTCTACTTTGCGGAGCGGCTAACTGAGCACTACAAACGCCCTAATGGTGAAGGGCCTCATGTTTACCTGAAGAGGGAAGATCTTAACCATACCGGGGCCCATAAGATCAACAATGCCGTTGCCCAAGCCTTGCTTGCTAAGAAATTGGGAAAGAAACGGATTATTGCTGAGACTGGAGCAGGACAACATGGTGTTGCCACTGCCACAGTTTGTGCTCGGTTTGGATTGCAGTGTATCATCTACATGGGTGCCCAAGATATGGAAAGGCAAGCCCTCAATGTTTTCAGAATGCGGCTTCTGGGGGCTGAGGTTAGACCAGTCCATTCTGGGACAGCAACATTGAAGGATGCTACTTCAGAAGCGATAAGGGACTGGGTGACTAATGTCGAGACAACTCATTATATTTTGGGCTCTGTTGCTGGCCCACATCCATACCCTATGATGGTTCGGGATTTCCACAAGGTGATTGGTAGAGAAACAAGAAAACAAGCACTGGAAAAGTGGGGAGGGAAGCCAGATGTGCTGGTAGCTTGTGTTGGTGGAGGTTCAAATGCCATGGGACTCTTCCATGAGTTTGTTGACGACAAAGATGTCCGGCTGATTGGGGTGGAGGCTGCAGGGTTTGGATTGGACAGTGGAAAGCATGCTGCAACTTTGACCAAAGGGGAAGTTGGGGTCTTGCATGGAGCAATGAGCTACTTGTTACAGGATGATGATGGACAAATTATTGAGCCTCATTCTATAAGTGCAGGCCTGGATTACCCTGGAGTTGGCCCGGAGCATAGTTTTCTGAAAGACATGGGGCGTGCTGAGTATTATAGCATTACTGATGAAGAAGCATTGGAAGCTTTTAAACGATTATCAAGACTGGAGGGGATAATTCCGGCTTTGGAGACATCTCATGCACTGGCTTACTTAGAGAAGTTGTGCCCTACGCTCCCCGACGGTGCCAAGGTCGTGCTTAACTGCAGTGGCAGAGGGGATAAGGATGTCCAAACCGCCATCAAGCACTTGAAGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004834 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009651 GO:0009683 GO:0009684 GO:0009850 GO:0009851 GO:0009941 GO:0009987 GO:0010817 GO:0016020 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019752 GO:0019904 GO:0031967 GO:0031975 GO:0032787 GO:0034641 GO:0034754 GO:0042401 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0072330 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00400 ko01100 ko01110 ko01130 ko01230 map00260 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PALP

Protein Analysis

473

Amino Acids

51.18

Weight (kDa)

6.84

Isoelectric Point (pI)

27.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009479)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27070 AT5G54810
fragaria_vesca	FvH4_2g15220 FvH4_3g22100
malus_domestica	MD03G1208800.v1.1 MD11G1223500.v1.1
prunus_persica	Prupe.4G207900_v2.0.a1
pyrus_communis	pycom03g15780 pycom11g19710
rosa_chinensis	RchiOBHm_Chr5g0037911 RchiOBHm_Chr6g0277971
rosa_laevigata	RLG00000033822
rosa_multiflora	Rmu_sc0001474.1_g000007 Rmu_sc0005416.1_g000042
rosa_roxburghii	Rroxscaffold_1G00042990 Rroxscaffold_7G00190640
rosa_rugosa	Rorug05G0169100
rosa_samantha	Rh5AG257600 Rh6CG230100 Rh6DG220900
rosa_wichuraiana	Rw5G023880 Rw6G019520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	986
AccB1I	GGYRCC	3 cut(s)	206, 644, 1343
AccB7I	CCANNNNNTGG	1 cut(s)	655
AccBSI	CCGCTC	3 cut(s)	67, 176, 412
AccII	CGCG	3 cut(s)	123, 293, 314
AcoI	YGGCCR	2 cut(s)	171, 241
AcuI	CTGAAG	3 cut(s)	164, 485, 735
AcyI	GRCGYC	1 cut(s)	207
AdeI	CACNNNGTG	1 cut(s)	859
AfaI	GTAC	1 cut(s)	269
AfiI	CCNNNNNNNGG	6 cut(s)	169, 469, 490, 655, 838, 1166
AgsI	TTSAA	6 cut(s)	109, 358, 370, 739, 945, 1411
AjnI	CCWGG	2 cut(s)	1149, 1159
AluBI	AGCT	5 cut(s)	304, 926, 1092, 1244, 1414
AluI	AGCT	5 cut(s)	304, 926, 1092, 1244, 1414
Alw21I	GWGCWC	3 cut(s)	306, 426, 613
Alw26I	GTCTC	5 cut(s)	161, 272, 560, 779, 1283
Ama87I	CYCGRG	3 cut(s)	162, 275, 305
AoxI	GGCC	9 cut(s)	171, 227, 241, 309, 449, 492, 817, 1147, 1168
ApaI	GGGCCC	1 cut(s)	496
ApeKI	GCWGC	6 cut(s)	5, 8, 11, 131, 1010, 1043
Asp700I	GAANNNNTTC	1 cut(s)	342
AspLEI	GCGC	4 cut(s)	26, 125, 209, 295
AspS9I	GGNCC	6 cut(s)	228, 449, 492, 493, 818, 1169
AsuC2I	CCSGG	6 cut(s)	163, 164, 215, 226, 490, 1172
AsuHPI	GGTGA	4 cut(s)	151, 455, 784, 871
AvaI	CYCGRG	3 cut(s)	162, 275, 305
BaeGI	GKGCMC	3 cut(s)	496, 649, 1328
BanI	GGYRCC	3 cut(s)	206, 644, 1343
BanII	GRGCYC	3 cut(s)	306, 496, 809
Bbv12I	GWGCWC	3 cut(s)	306, 426, 613
BbvCI	CCTCAGC	1 cut(s)	702
BbvI	GCAGC	6 cut(s)	17, 20, 23, 118, 997, 1030
BccI	CCATC	5 cut(s)	152, 178, 832, 1106, 1406
BceAI	ACGGC	2 cut(s)	220, 497
BciT130I	CCWGG	2 cut(s)	1151, 1161
BcnI	CCSGG	6 cut(s)	163, 164, 215, 226, 490, 1172
BcoDI	GTCTC	5 cut(s)	161, 272, 560, 779, 1283
BfmI	CTRYAG	3 cut(s)	151, 1011, 1363
BfoI	RGCGCY	2 cut(s)	27, 210
BglI	GCCNNNNNGGC	1 cut(s)	249
BglII	AGATCT	1 cut(s)	475
BlpI	GCTNAGC	1 cut(s)	300
Bme1390I	CCNGG	8 cut(s)	163, 164, 215, 226, 490, 1151, 1161, 1172
BmeT110I	CYCGRG	3 cut(s)	162, 275, 305
BmgT120I	GGNCC	6 cut(s)	228, 449, 492, 493, 818, 1169
BmiI	GGNNCC	5 cut(s)	208, 493, 494, 646, 1345
BmrFI	CCNGG	8 cut(s)	163, 164, 215, 226, 490, 1151, 1161, 1172
BmrI	ACTGGG	1 cut(s)	778
BmsI	GCATC	1 cut(s)	733
BmuI	ACTGGG	1 cut(s)	778
BoxI	GACNNNNGTC	1 cut(s)	779
BplI	GAGNNNNNCTC	2 cut(s)	376, 408
BpmI	CTGGAG	3 cut(s)	591, 1182, 1286
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu1102I	GCTNAGC	1 cut(s)	300
BpuMI	CCSGG	6 cut(s)	163, 164, 215, 226, 490, 1172
BsaHI	GRCGYC	1 cut(s)	207
BsaI	GGTCTC	1 cut(s)	272
BsaJI	CCNNGG	6 cut(s)	162, 224, 489, 951, 1159, 1347
BsaWI	WCCGGW	1 cut(s)	17
BsaXI	ACNNNNNCTCC	2 cut(s)	71, 101
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 469, 490, 655, 838, 1166
Bse118I	RCCGGY	1 cut(s)	243
Bse1I	ACTGG	6 cut(s)	574, 713, 773, 894, 1269, 1308
Bse3DI	GCAATG	1 cut(s)	1092
BseBI	CCWGG	2 cut(s)	1151, 1161
BseDI	CCNNGG	6 cut(s)	162, 224, 489, 951, 1159, 1347
BseGI	GGATG	6 cut(s)	140, 193, 748, 823, 1111, 1390
BseLI	CCNNNNNNNGG	6 cut(s)	169, 469, 490, 655, 838, 1166
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	5 cut(s)	291, 411, 555, 693, 1197
BseNI	ACTGG	6 cut(s)	574, 713, 773, 894, 1269, 1308
BseRI	GAGGAG	2 cut(s)	79, 384
BseSI	GKGCMC	3 cut(s)	496, 649, 1328
BseX3I	CGGCCG	1 cut(s)	171
BseXI	GCAGC	6 cut(s)	17, 20, 23, 118, 997, 1030
BsgI	GTGCAG	1 cut(s)	1164
Bsh1236I	CGCG	3 cut(s)	123, 293, 314
Bsh1285I	CGRYCG	1 cut(s)	174
BshFI	GGCC	9 cut(s)	173, 229, 243, 311, 451, 494, 819, 1149, 1170
BshNI	GGYRCC	3 cut(s)	206, 644, 1343
BsiEI	CGRYCG	1 cut(s)	174
BsiHKAI	GWGCWC	3 cut(s)	306, 426, 613
BsiHKCI	CYCGRG	3 cut(s)	162, 275, 305
BsiSI	CCGG	9 cut(s)	18, 163, 215, 226, 244, 489, 991, 1172, 1280
BslFI	GGGAC	4 cut(s)	257, 739, 779, 969
BslI	CCNNNNNNNGG	6 cut(s)	169, 469, 490, 655, 838, 1166
BsmAI	GTCTC	5 cut(s)	161, 272, 560, 779, 1283
BsmFI	GGGAC	4 cut(s)	257, 739, 779, 969
BsmI	GAATGC	1 cut(s)	690
BsnI	GGCC	9 cut(s)	173, 229, 243, 311, 451, 494, 819, 1149, 1170
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	3 cut(s)	162, 275, 305
Bsp120I	GGGCCC	1 cut(s)	492
Bsp1286I	GDGCHC	7 cut(s)	306, 426, 496, 613, 649, 809, 1328
Bsp143I	GATC	2 cut(s)	475, 501
Bsp1720I	GCTNAGC	1 cut(s)	300
Bsp19I	CCATGG	1 cut(s)	951
BspANI	GGCC	9 cut(s)	173, 229, 243, 311, 451, 494, 819, 1149, 1170
BspCNI	CTCAG	5 cut(s)	292, 412, 556, 694, 1198
BspFNI	CGCG	3 cut(s)	123, 293, 314
BspLI	GGNNCC	5 cut(s)	208, 493, 494, 646, 1345
BspMAI	CTGCAG	3 cut(s)	155, 1015, 1367
BspQI	GCTCTTC	1 cut(s)	183
BspT107I	GGYRCC	3 cut(s)	206, 644, 1343
BspTNI	GGTCTC	1 cut(s)	272
BsrBI	CCGCTC	3 cut(s)	67, 176, 412
BsrDI	GCAATG	1 cut(s)	1092
BsrFI	RCCGGY	1 cut(s)	243
BsrI	ACTGG	6 cut(s)	574, 713, 773, 894, 1269, 1308
BssAI	RCCGGY	1 cut(s)	243
BssECI	CCNNGG	6 cut(s)	162, 224, 489, 951, 1159, 1347
BssMI	GATC	2 cut(s)	475, 501
BssNI	GRCGYC	1 cut(s)	207
BssT1I	CCWWGG	2 cut(s)	951, 1347
Bst2UI	CCWGG	2 cut(s)	1151, 1161
Bst4CI	ACNGT	3 cut(s)	604, 1031, 1343
Bst6I	CTCTTC	4 cut(s)	183, 333, 461, 965
BstACI	GRCGYC	1 cut(s)	207
BstC8I	GCNNGC	8 cut(s)	291, 297, 531, 666, 817, 1041, 1147, 1203
BstDEI	CTNAG	7 cut(s)	300, 420, 534, 564, 702, 1206, 1312
BstDSI	CCRYGG	1 cut(s)	951
BstF5I	GGATG	6 cut(s)	140, 193, 748, 823, 1111, 1390
BstFNI	CGCG	3 cut(s)	123, 293, 314
BstH2I	RGCGCY	2 cut(s)	27, 210
BstHHI	GCGC	4 cut(s)	26, 125, 209, 295
BstKTI	GATC	2 cut(s)	478, 504
BstMAI	GTCTC	5 cut(s)	161, 272, 560, 779, 1283
BstMBI	GATC	2 cut(s)	475, 501
BstMCI	CGRYCG	1 cut(s)	174
BstNI	CCWGG	2 cut(s)	1151, 1161
BstNSI	RCATGY	1 cut(s)	1043
BstPAI	GACNNNNGTC	1 cut(s)	779
BstSCI	CCNGG	8 cut(s)	161, 162, 213, 224, 488, 1149, 1159, 1170
BstSFI	CTRYAG	3 cut(s)	151, 1011, 1363
BstSLI	GKGCMC	3 cut(s)	496, 649, 1328
BstUI	CGCG	3 cut(s)	123, 293, 314
BstV1I	GCAGC	6 cut(s)	17, 20, 23, 118, 997, 1030
BstX2I	RGATCY	1 cut(s)	475
BstYI	RGATCY	1 cut(s)	475
BstZI	CGGCCG	1 cut(s)	171
BsuRI	GGCC	9 cut(s)	173, 229, 243, 311, 451, 494, 819, 1149, 1170
BtgI	CCRYGG	1 cut(s)	951
BtsCI	GGATG	6 cut(s)	140, 193, 748, 823, 1111, 1390
BtsI	GCAGTG	3 cut(s)	594, 632, 1372
BtsIMutI	CAGTG	6 cut(s)	594, 632, 887, 1036, 1301, 1372
Cac8I	GCNNGC	8 cut(s)	291, 297, 531, 666, 817, 1041, 1147, 1203
CfoI	GCGC	4 cut(s)	26, 125, 209, 295
Cfr10I	RCCGGY	1 cut(s)	243
Cfr13I	GGNCC	6 cut(s)	228, 449, 492, 493, 818, 1169
Cfr9I	CCCGGG	1 cut(s)	162
Csp6I	GTAC	1 cut(s)	268
CviAII	CATG	9 cut(s)	455, 584, 640, 952, 965, 1040, 1079, 1195, 1298
CviQI	GTAC	1 cut(s)	268
DdeI	CTNAG	7 cut(s)	300, 420, 534, 564, 702, 1206, 1312
DinI	GGCGCC	1 cut(s)	208
DpnI	GATC	2 cut(s)	477, 503
DpnII	GATC	2 cut(s)	475, 501
DraI	TTTAAA	1 cut(s)	1249
DraIII	CACNNNGTG	1 cut(s)	859
DrdI	GACNNNNNNGTC	1 cut(s)	986
DseDI	GACNNNNNNGTC	1 cut(s)	986
EaeI	YGGCCR	2 cut(s)	171, 241
EagI	CGGCCG	1 cut(s)	171
Eam1104I	CTCTTC	4 cut(s)	183, 333, 461, 965
EarI	CTCTTC	4 cut(s)	183, 333, 461, 965
Ecl136II	GAGCTC	1 cut(s)	304
EclXI	CGGCCG	1 cut(s)	171
Eco130I	CCWWGG	2 cut(s)	951, 1347
Eco147I	AGGCCT	1 cut(s)	1149
Eco24I	GRGCYC	3 cut(s)	306, 496, 809
Eco31I	GGTCTC	1 cut(s)	272
Eco52I	CGGCCG	1 cut(s)	171
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	3 cut(s)	164, 485, 735
Eco88I	CYCGRG	3 cut(s)	162, 275, 305
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	449, 492
EcoRII	CCWGG	2 cut(s)	1149, 1159
EcoT14I	CCWWGG	2 cut(s)	951, 1347
EcoT38I	GRGCYC	3 cut(s)	306, 496, 809
EgeI	GGCGCC	1 cut(s)	208
EheI	GGCGCC	1 cut(s)	208
ErhI	CCWWGG	2 cut(s)	951, 1347
FaeI	CATG	9 cut(s)	458, 587, 643, 955, 968, 1043, 1082, 1198, 1301
FalI	AAGNNNNNCTT	2 cut(s)	513, 545
FaqI	GGGAC	4 cut(s)	257, 739, 779, 969
FatI	CATG	9 cut(s)	454, 583, 639, 951, 964, 1039, 1078, 1194, 1297
FauI	CCCGC	2 cut(s)	128, 254
FokI	GGATG	6 cut(s)	127, 200, 755, 810, 1118, 1397
FriOI	GRGCYC	3 cut(s)	306, 496, 809
GlaI	GCGC	4 cut(s)	25, 124, 208, 294
GsuI	CTGGAG	3 cut(s)	591, 1182, 1286
HaeII	RGCGCY	2 cut(s)	27, 210
HaeIII	GGCC	9 cut(s)	173, 229, 243, 311, 451, 494, 819, 1149, 1170
HapII	CCGG	9 cut(s)	18, 163, 215, 226, 244, 489, 991, 1172, 1280
HhaI	GCGC	4 cut(s)	26, 125, 209, 295
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	9 cut(s)	458, 587, 643, 955, 968, 1043, 1082, 1198, 1301
Hin6I	GCGC	4 cut(s)	24, 123, 207, 293
HinP1I	GCGC	4 cut(s)	24, 123, 207, 293
HincII	GTYRAC	1 cut(s)	976
HindII	GTYRAC	1 cut(s)	976
HindIII	AAGCTT	2 cut(s)	1242, 1412
HinfI	GANTC	3 cut(s)	167, 233, 957
HpaII	CCGG	9 cut(s)	18, 163, 215, 226, 244, 489, 991, 1172, 1280
HphI	GGTGA	4 cut(s)	151, 455, 784, 871
Hpy166II	GTNNAC	3 cut(s)	114, 460, 976
Hpy188I	TCNGA	5 cut(s)	183, 348, 683, 754, 1188
Hpy188III	TCNNGA	3 cut(s)	784, 845, 1260
Hpy8I	GTNNAC	3 cut(s)	114, 460, 976
Hpy99I	CGWCG	1 cut(s)	1343
HpyAV	CCTTC	5 cut(s)	115, 220, 364, 440, 733
HpyCH4III	ACNGT	3 cut(s)	604, 1031, 1343
HpyCH4IV	ACGT	1 cut(s)	270
HpyF3I	CTNAG	7 cut(s)	300, 420, 534, 564, 702, 1206, 1312
HpySE526I	ACGT	1 cut(s)	270
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	9 cut(s)	458, 587, 643, 955, 968, 1043, 1082, 1198, 1301
HspAI	GCGC	4 cut(s)	24, 123, 207, 293
KasI	GGCGCC	1 cut(s)	206
Kzo9I	GATC	2 cut(s)	475, 501
LguI	GCTCTTC	1 cut(s)	183
LmnI	GCTCC	6 cut(s)	72, 409, 572, 1082, 1174, 1338
Lsp1109I	GCAGC	6 cut(s)	17, 20, 23, 118, 997, 1030
LweI	GCATC	1 cut(s)	733
MaeII	ACGT	1 cut(s)	270
MaeIII	GTNAC	2 cut(s)	772, 1098
MalI	GATC	2 cut(s)	477, 503
MbiI	CCGCTC	3 cut(s)	67, 176, 412
MboI	GATC	2 cut(s)	475, 501
MboII	GAAGA	7 cut(s)	170, 212, 350, 478, 485, 952, 1241
MflI	RGATCY	1 cut(s)	475
MhlI	GDGCHC	7 cut(s)	306, 426, 496, 613, 649, 809, 1328
MluCI	AATT	3 cut(s)	539, 1119, 1275
Mly113I	GGCGCC	1 cut(s)	207
MlyI	GAGTC	1 cut(s)	951
MroXI	GAANNNNTTC	1 cut(s)	342
MseI	TTAA	3 cut(s)	480, 1248, 1359
MslI	CAYNNNNRTG	1 cut(s)	638
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	9 cut(s)	18, 163, 215, 226, 244, 489, 991, 1172, 1280
MspR9I	CCNGG	8 cut(s)	163, 164, 215, 226, 490, 1151, 1161, 1172
Mva1269I	GAATGC	1 cut(s)	690
MvaI	CCWGG	2 cut(s)	1151, 1161
MvnI	CGCG	3 cut(s)	123, 293, 314
NarI	GGCGCC	1 cut(s)	207
NciI	CCSGG	6 cut(s)	163, 164, 215, 226, 490, 1172
NcoI	CCATGG	1 cut(s)	951
NdeII	GATC	2 cut(s)	475, 501
NlaIII	CATG	9 cut(s)	458, 587, 643, 955, 968, 1043, 1082, 1198, 1301
NlaIV	GGNNCC	5 cut(s)	208, 493, 494, 646, 1345
NmuCI	GTSAC	1 cut(s)	772
NspI	RCATGY	1 cut(s)	1043
PaeI	GCATGC	1 cut(s)	1043
PaeR7I	CTCGAG	1 cut(s)	305
PceI	AGGCCT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	183
PcsI	WCGNNNNNNNCGW	2 cut(s)	303, 333
PctI	GAATGC	1 cut(s)	690
PdmI	GAANNNNTTC	1 cut(s)	342
PfeI	GAWTC	2 cut(s)	167, 233
PflMI	CCANNNNNTGG	1 cut(s)	655
PleI	GAGTC	1 cut(s)	951
PluTI	GGCGCC	1 cut(s)	210
PpsI	GAGTC	1 cut(s)	951
PshAI	GACNNNNGTC	1 cut(s)	779
Psp124BI	GAGCTC	1 cut(s)	306
Psp6I	CCWGG	2 cut(s)	1149, 1159
PspGI	CCWGG	2 cut(s)	1149, 1159
PspN4I	GGNNCC	5 cut(s)	208, 493, 494, 646, 1345
PspOMI	GGGCCC	1 cut(s)	492
PspPI	GGNCC	6 cut(s)	228, 449, 492, 493, 818, 1169
PspXI	VCTCGAGB	1 cut(s)	305
PstI	CTGCAG	3 cut(s)	155, 1015, 1367
PsuI	RGATCY	1 cut(s)	475
RsaI	GTAC	1 cut(s)	269
RsaNI	GTAC	1 cut(s)	268
RseI	CAYNNNNRTG	1 cut(s)	638
SacI	GAGCTC	1 cut(s)	306
SapI	GCTCTTC	1 cut(s)	183
SaqAI	TTAA	3 cut(s)	480, 1248, 1359
Sau3AI	GATC	2 cut(s)	475, 501
Sau96I	GGNCC	6 cut(s)	228, 449, 492, 493, 818, 1169
SchI	GAGTC	1 cut(s)	951
ScrFI	CCNGG	8 cut(s)	163, 164, 215, 226, 490, 1151, 1161, 1172
SduI	GDGCHC	7 cut(s)	306, 426, 496, 613, 649, 809, 1328
SfaNI	GCATC	1 cut(s)	733
SfcI	CTRYAG	3 cut(s)	151, 1011, 1363
SfoI	GGCGCC	1 cut(s)	208
Sfr274I	CTCGAG	1 cut(s)	305
SlaI	CTCGAG	1 cut(s)	305
SmaI	CCCGGG	1 cut(s)	164
SmiMI	CAYNNNNRTG	1 cut(s)	638
SmlI	CTYRAG	1 cut(s)	305
SmoI	CTYRAG	1 cut(s)	305
SphI	GCATGC	1 cut(s)	1043
Sse9I	AATT	3 cut(s)	539, 1119, 1275
SseBI	AGGCCT	1 cut(s)	1149
SspDI	GGCGCC	1 cut(s)	206
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	1149
StyD4I	CCNGG	8 cut(s)	161, 162, 213, 224, 488, 1149, 1159, 1170
StyI	CCWWGG	2 cut(s)	951, 1347
TaaI	ACNGT	3 cut(s)	604, 1031, 1343
TaiI	ACGT	1 cut(s)	273
TaqI	TCGA	2 cut(s)	306, 783
TasI	AATT	3 cut(s)	539, 1119, 1275
TauI	GCSGC	5 cut(s)	67, 176, 314, 415, 691
TfiI	GAWTC	2 cut(s)	167, 233
Tru1I	TTAA	3 cut(s)	480, 1248, 1359
Tru9I	TTAA	3 cut(s)	480, 1248, 1359
TscAI	CASTG	6 cut(s)	601, 632, 894, 1036, 1308, 1372
TseFI	GTSAC	1 cut(s)	772
TseI	GCWGC	6 cut(s)	5, 8, 11, 131, 1010, 1043
Tsp45I	GTSAC	1 cut(s)	772
TspDTI	ATGAA	1 cut(s)	1242
TspGWI	ACGGA	1 cut(s)	568
TspMI	CCCGGG	1 cut(s)	162
TspRI	CASTG	6 cut(s)	601, 632, 894, 1036, 1308, 1372
Van91I	CCANNNNNTGG	1 cut(s)	655
XceI	RCATGY	1 cut(s)	1043
XcmI	CCANNNNNNNNNTGG	1 cut(s)	860
XhoI	CTCGAG	1 cut(s)	305
XmaI	CCCGGG	1 cut(s)	162
XmnI	GAANNNNTTC	1 cut(s)	342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.