tryptophan synthase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27070 AT5G54810 |
| fragaria_vesca | FvH4_2g15220 FvH4_3g22100 |
| malus_domestica | MD03G1208800.v1.1 MD11G1223500.v1.1 |
| prunus_persica | Prupe.4G207900_v2.0.a1 |
| pyrus_communis | pycom03g15780 pycom11g19710 |
| rosa_chinensis | RchiOBHm_Chr5g0037911 RchiOBHm_Chr6g0277971 |
| rosa_laevigata | RLG00000033822 |
| rosa_multiflora | Rmu_sc0001474.1_g000007 Rmu_sc0005416.1_g000042 |
| rosa_roxburghii | Rroxscaffold_1G00042990 Rroxscaffold_7G00190640 |
| rosa_rugosa | Rorug05G0169100 |
| rosa_samantha | Rh5AG257600 Rh6CG230100 Rh6DG220900 |
| rosa_wichuraiana | Rw5G023880 Rw6G019520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 187 |
| AciI | CCGC | 1 cut(s) | 187 |
| AcsI | RAATTY | 1 cut(s) | 223 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AgsI | TTSAA | 1 cut(s) | 159 |
| AluBI | AGCT | 2 cut(s) | 155, 215 |
| AluI | AGCT | 2 cut(s) | 155, 215 |
| Alw21I | GWGCWC | 1 cut(s) | 17 |
| Alw26I | GTCTC | 4 cut(s) | 35, 72, 131, 303 |
| ApeKI | GCWGC | 1 cut(s) | 275 |
| ApoI | RAATTY | 1 cut(s) | 223 |
| AspLEI | GCGC | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 1 cut(s) | 17 |
| BbvI | GCAGC | 1 cut(s) | 262 |
| BccI | CCATC | 2 cut(s) | 113, 212 |
| BcoDI | GTCTC | 4 cut(s) | 35, 72, 131, 303 |
| BfoI | RGCGCY | 1 cut(s) | 202 |
| BisI | GCNGC | 1 cut(s) | 276 |
| BlsI | GCNGC | 1 cut(s) | 277 |
| BsaJI | CCNNGG | 1 cut(s) | 202 |
| BseDI | CCNNGG | 1 cut(s) | 202 |
| BseGI | GGATG | 1 cut(s) | 139 |
| BseMII | CTCAG | 2 cut(s) | 44, 219 |
| BseXI | GCAGC | 1 cut(s) | 262 |
| BsiHKAI | GWGCWC | 1 cut(s) | 17 |
| BsmAI | GTCTC | 4 cut(s) | 35, 72, 131, 303 |
| BsmBI | CGTCTC | 1 cut(s) | 303 |
| BsmI | GAATGC | 1 cut(s) | 30 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| BspACI | CCGC | 1 cut(s) | 187 |
| BspCNI | CTCAG | 2 cut(s) | 45, 220 |
| BsrBI | CCGCTC | 1 cut(s) | 187 |
| BssECI | CCNNGG | 1 cut(s) | 202 |
| BssT1I | CCWWGG | 1 cut(s) | 202 |
| Bst6I | CTCTTC | 1 cut(s) | 298 |
| BstC8I | GCNNGC | 1 cut(s) | 251 |
| BstDEI | CTNAG | 4 cut(s) | 53, 228, 257, 284 |
| BstF5I | GGATG | 1 cut(s) | 139 |
| BstH2I | RGCGCY | 1 cut(s) | 202 |
| BstHHI | GCGC | 1 cut(s) | 201 |
| BstMAI | GTCTC | 4 cut(s) | 35, 72, 131, 303 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 184 |
| BstV1I | GCAGC | 1 cut(s) | 262 |
| BtsCI | GGATG | 1 cut(s) | 139 |
| BtsI | GCAGTG | 1 cut(s) | 65 |
| BtsIMutI | CAGTG | 1 cut(s) | 65 |
| Cac8I | GCNNGC | 1 cut(s) | 251 |
| CfoI | GCGC | 1 cut(s) | 201 |
| CseI | GACGC | 1 cut(s) | 167 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviJI | RGCY | 3 cut(s) | 149, 155, 215 |
| CviKI_1 | RGCY | 3 cut(s) | 149, 155, 215 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 4 cut(s) | 53, 228, 257, 284 |
| Eam1104I | CTCTTC | 1 cut(s) | 298 |
| EarI | CTCTTC | 1 cut(s) | 298 |
| Eco130I | CCWWGG | 1 cut(s) | 202 |
| EcoRI | GAATTC | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 1 cut(s) | 202 |
| ErhI | CCWWGG | 1 cut(s) | 202 |
| Esp3I | CGTCTC | 1 cut(s) | 303 |
| FaiI | YATR | 6 cut(s) | 47, 144, 324, 350, 352, 354 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 277, 309 |
| FauI | CCCGC | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 1 cut(s) | 276 |
| FokI | GGATG | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 276 |
| GlaI | GCGC | 1 cut(s) | 200 |
| GluI | GCNGC | 1 cut(s) | 276 |
| HaeII | RGCGCY | 1 cut(s) | 202 |
| HgaI | GACGC | 1 cut(s) | 167 |
| HhaI | GCGC | 1 cut(s) | 201 |
| Hin6I | GCGC | 1 cut(s) | 199 |
| HinP1I | GCGC | 1 cut(s) | 199 |
| HindIII | AAGCTT | 1 cut(s) | 153 |
| HinfI | GANTC | 1 cut(s) | 362 |
| Hpy188I | TCNGA | 1 cut(s) | 229 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| HpyCH4V | TGCA | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 184 |
| HpyF3I | CTNAG | 4 cut(s) | 53, 228, 257, 284 |
| HspAI | GCGC | 1 cut(s) | 199 |
| LpnPI | CCDG | 4 cut(s) | 6, 120, 264, 318 |
| Lsp1109I | GCAGC | 1 cut(s) | 262 |
| MaeIII | GTNAC | 1 cut(s) | 368 |
| MbiI | CCGCTC | 1 cut(s) | 187 |
| MboII | GAAGA | 2 cut(s) | 104, 285 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 223, 243, 340 |
| MlyI | GAGTC | 1 cut(s) | 356 |
| MnlI | CCTC | 4 cut(s) | 48, 82, 124, 160 |
| MseI | TTAA | 2 cut(s) | 233, 339 |
| Mva1269I | GAATGC | 1 cut(s) | 30 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 184 |
| PctI | GAATGC | 1 cut(s) | 30 |
| PkrI | GCNGC | 1 cut(s) | 277 |
| PleI | GAGTC | 1 cut(s) | 356 |
| PpsI | GAGTC | 1 cut(s) | 356 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 2 cut(s) | 233, 339 |
| SatI | GCNGC | 1 cut(s) | 276 |
| SchI | GAGTC | 1 cut(s) | 356 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 4 cut(s) | 10, 157, 217, 290 |
| Sse9I | AATT | 3 cut(s) | 223, 243, 340 |
| SsiI | CCGC | 1 cut(s) | 187 |
| StyI | CCWWGG | 1 cut(s) | 202 |
| TasI | AATT | 3 cut(s) | 223, 243, 340 |
| Tru1I | TTAA | 2 cut(s) | 233, 339 |
| Tru9I | TTAA | 2 cut(s) | 233, 339 |
| TscAI | CASTG | 1 cut(s) | 65 |
| TseI | GCWGC | 1 cut(s) | 275 |
| TspDTI | ATGAA | 4 cut(s) | 159, 255, 306, 311 |
| TspRI | CASTG | 1 cut(s) | 65 |
| XapI | RAATTY | 1 cut(s) | 223 |