Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005776

Physical Location & Seq

Genomic Coordinates Forward (+)

22765251 .. 22768566

Gene Structure 3316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g22690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGTGGTGCACCCCAGTACTTATATCAACTCTCACATTCGGGACTGCACTTTTGTTGGGTGTACAACTCGATGCTGGGACAGTGTTCACAACCACAACCATCTTCAAAATTCTTCAGGAGCCAATCAGGGCATTCCCGCAATCTATGATATCAATTTCTCAAGCTATTATATCGCTTGGGAGGTTGGATCGATATATGAAGAGTAGGGAATTGGTGGAGGATTCGGTGGAGAGGGTAGAAGACTGCAATAGTAGGATTGCTGTTGAAGTTAAAGATGGCGCGTTTAGCTGGGACGATGAAAGCAATGAAGAGGCTTTGAAAAACATAAATATAAATGTTAATAAAGGTGAGCTAACGGCGATTGTAGGGACAGTGGGATCCGGAAAGTCTTCCCTTCTCGCCTCAATTCTTGGTGAGATGCACAAGTTATCGGGAACGGTACGAGTTTGCGGGAAAACTGCCTACGTGGCTCAAACGTCATGGATTCAAAACGGAACCATTGAAGAAAACATCCTATTTGGTATGCCAATGGACAGAGAGAGATACCGGGAAGTTGTCAGGGTTTGTTGCTTGGAAAAGGACATGGAAATGATGGAGTTTGGAGATCAAACTGAGATAGGAGAGCGTGGCATCAACCTAAGTGGTGGCCAGAAACAGAGGATACAACTTGCTCGTGCTGTGTATCAAAACTGTGACATATATCTTTTCGATGACGTCTTCAGTGCTGTTGATGCTCATACAGGGTCCGAAATATTTAAGGAATGTGTGAGGGGAGCGCTTAAAAACAAGACGGTTTTACTCGTAACTCATCAAGTGGACTTCTTGCATAATGTTGATCTTATTTTGGTCATGAGAGACGGGATGATAGTACAAGCAGGAAAGTATAACGATTTGCTAAATTCCGGCCTGGATTTCAAAGAGCTTGTTGCTGCCCATGAAACCTCCATGGAACTTGTAGAAATGAGTACTGCTGATCCCAGCAAAAGTTCCCCCGGACCTCAAATATCTCGGCAACTCTCTTCAAAACGTGGGGAAGCAAATGGTGAAAACAGCTCTTTGGACCAGCCAAAGTCTGATAAAGCGAGTTCTAAGCTCATCAAAGAAGAGGAGAAAGAAACCGGCAAAGTAAGCTTCCACATTTACAAAGTTTACTGCACGGAGGCTTACGGATGGGGTGGTGTGGTGGTAGTGTTGTCCTTGACTCTGATGTGGCAAGCATCTCAAATGTCAGGTGATTACTGGCTGTCGTATGAAACTGCAGCAAAGCGTGCAGCGTCATTCAAACCATCGGAGTTTATTATCGTCTATGCAATTATTGCTGGTGTCTCATTCATTGTGGTATTGATAAGAGCACTTGTCGTGATGTTTGTGGGGCTTAAAACAGCTCAGACATTTTTCAAGCAAATTCTTCATAGCATCCTGCATGCCCCCATGTCATTTTTCGATACTACACCTTCTGGAAGAATTCTGAGTAGGGCATCAACTGATCAGACGAACATCGATCTATTTCTTCCCTTCATAATGGGTATTACCATTGCCATGTACTTTACTGTGCTTGGTATCTTCATCATCGTATGCCAATATTCATGGCCGACTGTATTCTTGCTGATTCCGCTTGTTTGGCTTAATGTCTGGTACCGGGGTTACTATCTTGCATCATCTCGAGAGTTAACTCGACTTGATTCAATCACAAAAGCTCCTGTAATCCATCATTTCTCAGAAAGCATATCTGGGGTGATGACGATCCGCTCTTTCAGAATGCAAAGCTTGTTCTCCAAGGAAAACGTTAGACGAGTTAATGCCAACTTACGTATGGATTTCCACAACAATGGGTCCAATGAGTGGTTGGGTTTCCGTTTGGAGATGCTTGGGAGTTTACTTCTCTGTGTTTCCGCTATATTCATGATCTTGTTACCGAGCAGTATTATAAAGCCCGAGAATGTTGGTTTAACTCTCTCCTACGGATTGTCCCTTAATGGTGTGCTGTTTTGGGCCATATATTTGAGCTGCTTCGTTGAAAATAGGATGGTGTCAGTTGAGAGGATAAAACAGTTCACAAACATTCCATCAGAAGCAGCATGGAAGATTGTAGACCGTGTTCCTCCTCCAAATTGGCCTTCTCGTGGCAACGTTGAGCTCAAAGACTTGCAGGTCAGATATCGCCCAAATACACCTTTGGTTCTGAAAGGCATTAGTCTAAACATTTTCGGGGGTGAGAAGATTGGCGTTGTTGGTCGAACAGGAAGTGGGAAATCCACTTTAATCCAAGTGTTCTTTAGGCTGGTAGAACCTTCAGGAGGCAGAATTATCATCGATGGGATTGATATAACCACAATAGGGCTTCACGATCGATCAGGTCTAGCTTATCACATGGATCGATCATTCCTCAAGAACCTGTCCTTTTTGAAGGAACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0005886 GO:0005911 GO:0006810 GO:0006855 GO:0006950 GO:0008150 GO:0009414 GO:0009415 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009624 GO:0009628 GO:0009987 GO:0010035 GO:0010118 GO:0012505 GO:0015399 GO:0015405 GO:0015893 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0031090 GO:0042221 GO:0042493 GO:0042623 GO:0042626 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0055085 GO:0071944 GO:0098588 GO:0098805 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04071 ko04976 ko04977 ko05206 map01523 map01524 map02010 map04071 map04976 map04977 map05206

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

806

Amino Acids

89.94

Weight (kDa)

6.91

Isoelectric Point (pI)

33.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	106 - 239	3.9e-21	ABC transporter
ABC_membrane	PF00664	427 - 654	3.3e-31	ABC transporter transmembrane region
ABC_tran	PF00005	728 - 783	9.7e-11	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47800 AT3G62700
fragaria_vesca	FvH4_2g25570 FvH4_2g25570 FvH4_2g25570 FvH4_2g25570 FvH4_2g25570 FvH4_2g25570
malus_domestica	MD03G1286300.v1.1 MD11G1313300.v1.1 MD11G1313800.v1.1 MD11G1314300.v1.1
prunus_persica	Prupe.8G259800_v2.0.a1 Prupe.8G259800_v2.0.a1 Prupe.8G259800_v2.0.a1 Prupe.8G259800_v2.0.a1
pyrus_communis	pycom03g22680 pycom03g22690 pycom11g27270
rosa_chinensis	RchiOBHm_Chr6g0293781
rosa_laevigata	RLG00000011924
rosa_multiflora	Rmu_sc0005641.1_g000002
rosa_roxburghii	Rroxscaffold_7G00173910
rosa_rugosa	Rorug06G0238000
rosa_samantha	Rh6AG351300 Rh6BG358200 Rh6DG352000
rosa_wichuraiana	Rw6G030560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1928
AasI	GACNNNNNNGTC	1 cut(s)	2150
AatII	GACGTC	1 cut(s)	717
Acc36I	ACCTGC	1 cut(s)	2140
Acc65I	GGTACC	1 cut(s)	1635
AccB1I	GGYRCC	1 cut(s)	1635
AccB7I	CCANNNNNTGG	1 cut(s)	1842
AccBSI	CCGCTC	1 cut(s)	1749
AccI	GTMKAC	1 cut(s)	2091
AccII	CGCG	1 cut(s)	281
AccIII	TCCGGA	1 cut(s)	380
AciI	CCGC	5 cut(s)	137, 450, 1613, 1747, 1893
AclI	AACGTT	2 cut(s)	1785, 2130
AclWI	GGATC	6 cut(s)	195, 372, 385, 968, 1738, 2382
AcoI	YGGCCR	2 cut(s)	646, 1589
AcsI	RAATTY	4 cut(s)	108, 898, 1404, 1464
AcuI	CTGAAG	3 cut(s)	98, 703, 2277
AcyI	GRCGYC	1 cut(s)	714
AfaI	GTAC	7 cut(s)	18, 63, 441, 870, 967, 1544, 1637
AfeI	AGCGCT	1 cut(s)	777
AfiI	CCNNNNNNNGG	4 cut(s)	1842, 2123, 2297, 2337
AjnI	CCWGG	1 cut(s)	906
AjuI	GAANNNNNNNTTGG	2 cut(s)	2101, 2133
Alw21I	GWGCWC	3 cut(s)	11, 1354, 2139
Alw26I	GTCTC	2 cut(s)	849, 1330
Alw44I	GTGCAC	1 cut(s)	7
AlwI	GGATC	6 cut(s)	195, 372, 385, 968, 1738, 2382
Ama87I	CYCGRG	2 cut(s)	1662, 1934
Aor13HI	TCCGGA	1 cut(s)	380
Aor51HI	AGCGCT	1 cut(s)	777
AoxI	GGCC	5 cut(s)	646, 904, 1589, 1992, 2114
ApaLI	GTGCAC	1 cut(s)	7
ApeKI	GCWGC	5 cut(s)	929, 1259, 1271, 2007, 2075
ApoI	RAATTY	4 cut(s)	108, 898, 1404, 1464
ArsI	GACNNNNNNTTYG	2 cut(s)	34, 66
Asp700I	GAANNNNTTC	1 cut(s)	388
Asp718I	GGTACC	1 cut(s)	1635
AspLEI	GCGC	2 cut(s)	281, 778
AspS9I	GGNCC	5 cut(s)	744, 995, 1060, 1833, 1992
AsuC2I	CCSGG	3 cut(s)	548, 993, 1640
AsuHPI	GGTGA	6 cut(s)	359, 425, 1055, 1244, 1747, 2225
AvaI	CYCGRG	2 cut(s)	1662, 1934
AvaII	GGWCC	4 cut(s)	744, 995, 1060, 1833
BaeGI	GKGCMC	1 cut(s)	11
BaeI	ACNNNNGTAYC	2 cut(s)	1627, 1660
BalI	TGGCCA	1 cut(s)	648
BamHI	GGATCC	1 cut(s)	377
BanI	GGYRCC	1 cut(s)	1635
BanII	GRGCYC	1 cut(s)	2139
BauI	CACGAG	2 cut(s)	672, 2121
BbsI	GAAGAC	3 cut(s)	246, 381, 709
Bbv12I	GWGCWC	3 cut(s)	11, 1354, 2139
BbvI	GCAGC	5 cut(s)	916, 1271, 1283, 1994, 2087
BccI	CCATC	9 cut(s)	107, 269, 586, 1164, 1294, 1716, 2020, 2074, 2309
BceAI	ACGGC	1 cut(s)	372
BciT130I	CCWGG	1 cut(s)	908
BciVI	GTATCC	1 cut(s)	654
BclI	TGATCA	1 cut(s)	1486
BcnI	CCSGG	3 cut(s)	548, 993, 1640
BcoDI	GTCTC	2 cut(s)	849, 1330
BfaI	CTAG	1 cut(s)	2360
BfmI	CTRYAG	1 cut(s)	1257
BfoI	RGCGCY	1 cut(s)	779
BfuAI	ACCTGC	1 cut(s)	2140
BfuI	GTATCC	1 cut(s)	654
BglI	GCCNNNNNGGC	1 cut(s)	467
BisI	GCNGC	5 cut(s)	930, 1260, 1272, 2008, 2076
BlsI	GCNGC	5 cut(s)	931, 1261, 1273, 2009, 2077
BmcAI	AGTACT	2 cut(s)	18, 967
Bme1390I	CCNGG	4 cut(s)	548, 908, 993, 1640
Bme18I	GGWCC	4 cut(s)	744, 995, 1060, 1833
BmeT110I	CYCGRG	2 cut(s)	1662, 1934
BmgT120I	GGNCC	5 cut(s)	744, 995, 1060, 1833, 1992
BmiI	GGNNCC	6 cut(s)	120, 379, 496, 745, 1637, 1834
BmrFI	CCNGG	4 cut(s)	548, 908, 993, 1640
BmrI	ACTGGG	1 cut(s)	8
BmsI	GCATC	9 cut(s)	61, 408, 639, 721, 1226, 1425, 1487, 1664, 1854
BmuI	ACTGGG	1 cut(s)	8
BpiI	GAAGAC	3 cut(s)	246, 381, 709
BpuEI	CTTGAG	2 cut(s)	144, 2372
BpuMI	CCSGG	3 cut(s)	548, 993, 1640
Bsa29I	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BsaAI	YACGTR	2 cut(s)	466, 1811
BsaBI	GATNNNNATC	1 cut(s)	1742
BsaHI	GRCGYC	1 cut(s)	714
BsaJI	CCNNGG	4 cut(s)	945, 991, 1639, 1776
BsaWI	WCCGGW	1 cut(s)	380
BsaXI	ACNNNNNCTCC	2 cut(s)	1681, 1711
Bsc4I	CCNNNNNNNGG	4 cut(s)	1842, 2123, 2297, 2337
Bse118I	RCCGGY	1 cut(s)	1118
Bse1I	ACTGG	2 cut(s)	14, 1244
Bse3DI	GCAATG	2 cut(s)	310, 1533
Bse8I	GATNNNNATC	1 cut(s)	1742
BseAI	TCCGGA	1 cut(s)	380
BseBI	CCWGG	1 cut(s)	908
BseCI	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BseDI	CCNNGG	4 cut(s)	945, 991, 1639, 1776
BseGI	GGATG	5 cut(s)	510, 867, 1175, 1416, 2031
BseJI	GATNNNNATC	1 cut(s)	1742
BseLI	CCNNNNNNNGG	4 cut(s)	1842, 2123, 2297, 2337
BseMI	GCAATG	2 cut(s)	310, 1533
BseMII	CTCAG	4 cut(s)	603, 1400, 1460, 1731
BseNI	ACTGG	2 cut(s)	14, 1244
BseRI	GAGGAG	2 cut(s)	1121, 2094
BseSI	GKGCMC	1 cut(s)	11
BseXI	GCAGC	5 cut(s)	916, 1271, 1283, 1994, 2087
BseYI	CCCAGC	3 cut(s)	74, 288, 977
BsgI	GTGCAG	3 cut(s)	30, 1138, 1290
Bsh1236I	CGCG	1 cut(s)	281
Bsh1285I	CGRYCG	1 cut(s)	2350
BshFI	GGCC	5 cut(s)	648, 906, 1591, 1994, 2116
BshNI	GGYRCC	1 cut(s)	1635
BshVI	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BsiEI	CGRYCG	1 cut(s)	2350
BsiHKAI	GWGCWC	3 cut(s)	11, 1354, 2139
BsiHKCI	CYCGRG	2 cut(s)	1662, 1934
BsiSI	CCGG	6 cut(s)	381, 547, 903, 993, 1119, 1639
BslFI	GGGAC	5 cut(s)	55, 91, 305, 382, 1954
BslI	CCNNNNNNNGG	4 cut(s)	1842, 2123, 2297, 2337
BsmAI	GTCTC	2 cut(s)	849, 1330
BsmBI	CGTCTC	1 cut(s)	849
BsmFI	GGGAC	5 cut(s)	55, 91, 305, 382, 1954
BsmI	GAATGC	2 cut(s)	131, 1764
BsnI	GGCC	5 cut(s)	648, 906, 1591, 1994, 2116
BsoBI	CYCGRG	2 cut(s)	1662, 1934
Bsp1286I	GDGCHC	3 cut(s)	11, 1354, 2139
Bsp13I	TCCGGA	1 cut(s)	380
Bsp1407I	TGTACA	1 cut(s)	61
Bsp19I	CCATGG	1 cut(s)	945
BspACI	CCGC	5 cut(s)	137, 450, 1613, 1747, 1893
BspANI	GGCC	5 cut(s)	648, 906, 1591, 1994, 2116
BspCNI	CTCAG	4 cut(s)	604, 1399, 1461, 1730
BspDI	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BspEI	TCCGGA	1 cut(s)	380
BspFNI	CGCG	1 cut(s)	281
BspHI	TCATGA	2 cut(s)	849, 1902
BspLI	GGNNCC	6 cut(s)	120, 379, 496, 745, 1637, 1834
BspMAI	CTGCAG	1 cut(s)	1261
BspMI	ACCTGC	1 cut(s)	2140
BspPI	GGATC	6 cut(s)	195, 372, 385, 968, 1738, 2382
BspT107I	GGYRCC	1 cut(s)	1635
BsrBI	CCGCTC	1 cut(s)	1749
BsrDI	GCAATG	2 cut(s)	310, 1533
BsrFI	RCCGGY	1 cut(s)	1118
BsrGI	TGTACA	1 cut(s)	61
BsrI	ACTGG	2 cut(s)	14, 1244
BssAI	RCCGGY	1 cut(s)	1118
BssECI	CCNNGG	4 cut(s)	945, 991, 1639, 1776
BssNI	GRCGYC	1 cut(s)	714
BssSI	CACGAG	2 cut(s)	672, 2121
BssT1I	CCWWGG	2 cut(s)	945, 1776
Bst2BI	CACGAG	2 cut(s)	672, 2121
Bst2UI	CCWGG	1 cut(s)	908
Bst6I	CTCTTC	4 cut(s)	194, 303, 1024, 1098
BstACI	GRCGYC	1 cut(s)	714
BstAPI	GCANNNNNTGC	2 cut(s)	1268, 1316
BstAUI	TGTACA	1 cut(s)	61
BstBAI	YACGTR	2 cut(s)	466, 1811
BstC8I	GCNNGC	3 cut(s)	1215, 1269, 1425
BstDEI	CTNAG	6 cut(s)	612, 638, 1089, 1386, 1469, 1717
BstDSI	CCRYGG	1 cut(s)	945
BstENI	CCTNNNNNAGG	1 cut(s)	2295
BstF5I	GGATG	5 cut(s)	510, 867, 1175, 1416, 2031
BstFNI	CGCG	1 cut(s)	281
BstH2I	RGCGCY	1 cut(s)	779
BstHHI	GCGC	2 cut(s)	281, 778
BstMAI	GTCTC	2 cut(s)	849, 1330
BstMCI	CGRYCG	1 cut(s)	2350
BstMWI	GCNNNNNNNGC	8 cut(s)	285, 467, 731, 1128, 1268, 1316, 1612, 1621
BstNI	CCWGG	1 cut(s)	908
BstNSI	RCATGY	1 cut(s)	1427
BstSCI	CCNGG	4 cut(s)	546, 906, 991, 1638
BstSFI	CTRYAG	1 cut(s)	1257
BstSLI	GKGCMC	1 cut(s)	11
BstSNI	TACGTA	1 cut(s)	1811
BstUI	CGCG	1 cut(s)	281
BstV1I	GCAGC	5 cut(s)	916, 1271, 1283, 1994, 2087
BstV2I	GAAGAC	3 cut(s)	246, 381, 709
BstX2I	RGATCY	1 cut(s)	377
BstXI	CCANNNNNNTGG	1 cut(s)	1829
BstYI	RGATCY	1 cut(s)	377
Bsu15I	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BsuI	GTATCC	1 cut(s)	654
BsuRI	GGCC	5 cut(s)	648, 906, 1591, 1994, 2116
BsuTUI	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
BtgI	CCRYGG	1 cut(s)	945
BtsCI	GGATG	5 cut(s)	510, 867, 1175, 1416, 2031
BtsIMutI	CAGTG	3 cut(s)	87, 378, 727
BveI	ACCTGC	1 cut(s)	2140
Cac8I	GCNNGC	3 cut(s)	1215, 1269, 1425
CciI	TCATGA	2 cut(s)	849, 1902
CfoI	GCGC	2 cut(s)	281, 778
Cfr10I	RCCGGY	1 cut(s)	1118
Cfr13I	GGNCC	5 cut(s)	744, 995, 1060, 1833, 1992
ClaI	ATCGAT	5 cut(s)	190, 1500, 2313, 2350, 2377
CseI	GACGC	1 cut(s)	1263
Csp6I	GTAC	7 cut(s)	17, 62, 440, 869, 966, 1543, 1636
CspCI	CAANNNNNGTGG	2 cut(s)	622, 657
CviQI	GTAC	7 cut(s)	17, 62, 440, 869, 966, 1543, 1636
DdeI	CTNAG	6 cut(s)	612, 638, 1089, 1386, 1469, 1717
DrdI	GACNNNNNNGTC	1 cut(s)	2150
DseDI	GACNNNNNNGTC	1 cut(s)	2150
EaeI	YGGCCR	2 cut(s)	646, 1589
Eam1104I	CTCTTC	4 cut(s)	194, 303, 1024, 1098
EarI	CTCTTC	4 cut(s)	194, 303, 1024, 1098
Ecl136II	GAGCTC	1 cut(s)	2137
Eco105I	TACGTA	1 cut(s)	1811
Eco130I	CCWWGG	2 cut(s)	945, 1776
Eco24I	GRGCYC	1 cut(s)	2139
Eco32I	GATATC	2 cut(s)	150, 2159
Eco47I	GGWCC	4 cut(s)	744, 995, 1060, 1833
Eco47III	AGCGCT	1 cut(s)	777
Eco53kI	GAGCTC	1 cut(s)	2137
Eco57I	CTGAAG	3 cut(s)	98, 703, 2277
Eco88I	CYCGRG	2 cut(s)	1662, 1934
EcoICRI	GAGCTC	1 cut(s)	2137
EcoNI	CCTNNNNNAGG	1 cut(s)	2295
EcoRI	GAATTC	1 cut(s)	1464
EcoRII	CCWGG	1 cut(s)	906
EcoRV	GATATC	2 cut(s)	150, 2159
EcoT14I	CCWWGG	2 cut(s)	945, 1776
EcoT38I	GRGCYC	1 cut(s)	2139
ErhI	CCWWGG	2 cut(s)	945, 1776
Esp3I	CGTCTC	1 cut(s)	849
FaqI	GGGAC	5 cut(s)	55, 91, 305, 382, 1954
FauI	CCCGC	2 cut(s)	144, 443
FbaI	TGATCA	1 cut(s)	1486
FblI	GTMKAC	1 cut(s)	2091
Fnu4HI	GCNGC	5 cut(s)	930, 1260, 1272, 2008, 2076
FokI	GGATG	5 cut(s)	497, 874, 1182, 1403, 2038
FriOI	GRGCYC	1 cut(s)	2139
Fsp4HI	GCNGC	5 cut(s)	930, 1260, 1272, 2008, 2076
FspBI	CTAG	1 cut(s)	2360
GlaI	GCGC	2 cut(s)	280, 777
GluI	GCNGC	5 cut(s)	930, 1260, 1272, 2008, 2076
GsaI	CCCAGC	3 cut(s)	78, 292, 981
HaeII	RGCGCY	1 cut(s)	779
HaeIII	GGCC	5 cut(s)	648, 906, 1591, 1994, 2116
HapII	CCGG	6 cut(s)	381, 547, 903, 993, 1119, 1639
HgaI	GACGC	1 cut(s)	1263
HhaI	GCGC	2 cut(s)	281, 778
Hin1I	GRCGYC	1 cut(s)	714
Hin6I	GCGC	2 cut(s)	279, 776
HinP1I	GCGC	2 cut(s)	279, 776
HincII	GTYRAC	1 cut(s)	1671
HindII	GTYRAC	1 cut(s)	1671
HindIII	AAGCTT	2 cut(s)	1129, 1765
HinfI	GANTC	5 cut(s)	221, 484, 1201, 1609, 1682
HpaI	GTTAAC	1 cut(s)	1671
HpaII	CCGG	6 cut(s)	381, 547, 903, 993, 1119, 1639
HphI	GGTGA	6 cut(s)	359, 425, 1055, 1244, 1747, 2225
Hpy166II	GTNNAC	9 cut(s)	9, 62, 87, 817, 1150, 1671, 1877, 2055, 2092
Hpy8I	GTNNAC	9 cut(s)	9, 62, 87, 817, 1150, 1671, 1877, 2055, 2092
HpyAV	CCTTC	6 cut(s)	404, 1464, 1525, 2127, 2301, 2401
HpyCH4IV	ACGT	7 cut(s)	465, 476, 714, 1027, 1785, 1810, 2130
HpyF10VI	GCNNNNNNNGC	8 cut(s)	285, 467, 731, 1128, 1268, 1316, 1612, 1621
HpyF3I	CTNAG	6 cut(s)	612, 638, 1089, 1386, 1469, 1717
HpySE526I	ACGT	7 cut(s)	465, 476, 714, 1027, 1785, 1810, 2130
Hsp92I	GRCGYC	1 cut(s)	714
HspAI	GCGC	2 cut(s)	279, 776
Kpn2I	TCCGGA	1 cut(s)	380
KpnI	GGTACC	1 cut(s)	1639
Ksp22I	TGATCA	1 cut(s)	1486
KspAI	GTTAAC	1 cut(s)	1671
LmnI	GCTCC	3 cut(s)	118, 773, 1702
Lsp1109I	GCAGC	5 cut(s)	916, 1271, 1283, 1994, 2087
LweI	GCATC	9 cut(s)	61, 408, 639, 721, 1226, 1425, 1487, 1664, 1854
MaeI	CTAG	1 cut(s)	2360
MaeII	ACGT	7 cut(s)	465, 476, 714, 1027, 1785, 1810, 2130
MaeIII	GTNAC	4 cut(s)	692, 802, 1643, 1911
MbiI	CCGCTC	1 cut(s)	1749
MflI	RGATCY	1 cut(s)	377
MhlI	GDGCHC	3 cut(s)	11, 1354, 2139
MlsI	TGGCCA	1 cut(s)	648
MluNI	TGGCCA	1 cut(s)	648
MlyI	GAGTC	1 cut(s)	1195
MmeI	TCCRAC	1 cut(s)	165
Mox20I	TGGCCA	1 cut(s)	648
MroI	TCCGGA	1 cut(s)	380
MroXI	GAANNNNTTC	1 cut(s)	388
MscI	TGGCCA	1 cut(s)	648
MslI	CAYNNNNRTG	3 cut(s)	587, 1538, 1827
Msp20I	TGGCCA	1 cut(s)	648
MspI	CCGG	6 cut(s)	381, 547, 903, 993, 1119, 1639
MspR9I	CCNGG	4 cut(s)	548, 908, 993, 1640
Mva1269I	GAATGC	2 cut(s)	131, 1764
MvaI	CCWGG	1 cut(s)	908
MvnI	CGCG	1 cut(s)	281
MwoI	GCNNNNNNNGC	8 cut(s)	285, 467, 731, 1128, 1268, 1316, 1612, 1621
NciI	CCSGG	3 cut(s)	548, 993, 1640
NcoI	CCATGG	1 cut(s)	945
NlaIV	GGNNCC	6 cut(s)	120, 379, 496, 745, 1637, 1834
NmeAIII	GCCGAG	1 cut(s)	988
NmuCI	GTSAC	1 cut(s)	692
NspI	RCATGY	1 cut(s)	1427
PaeI	GCATGC	1 cut(s)	1427
PaeR7I	CTCGAG	1 cut(s)	1662
PagI	TCATGA	2 cut(s)	849, 1902
PctI	GAATGC	2 cut(s)	131, 1764
PdmI	GAANNNNTTC	1 cut(s)	388
PfeI	GAWTC	4 cut(s)	221, 484, 1609, 1682
PflMI	CCANNNNNTGG	1 cut(s)	1842
PkrI	GCNGC	5 cut(s)	931, 1261, 1273, 2009, 2077
Ple19I	CGATCG	1 cut(s)	2350
PleI	GAGTC	1 cut(s)	1195
PpsI	GAGTC	1 cut(s)	1195
Ppu21I	YACGTR	2 cut(s)	466, 1811
PsiI	TTATAA	1 cut(s)	1928
Psp124BI	GAGCTC	1 cut(s)	2139
Psp1406I	AACGTT	2 cut(s)	1785, 2130
Psp6I	CCWGG	1 cut(s)	906
PspFI	CCCAGC	3 cut(s)	74, 288, 977
PspGI	CCWGG	1 cut(s)	906
PspN4I	GGNNCC	6 cut(s)	120, 379, 496, 745, 1637, 1834
PspPI	GGNCC	5 cut(s)	744, 995, 1060, 1833, 1992
PsrI	GAACNNNNNNTAC	2 cut(s)	2082, 2114
PstI	CTGCAG	1 cut(s)	1261
PsuI	RGATCY	1 cut(s)	377
PvuI	CGATCG	1 cut(s)	2350
RsaI	GTAC	7 cut(s)	18, 63, 441, 870, 967, 1544, 1637
RsaNI	GTAC	7 cut(s)	17, 62, 440, 869, 966, 1543, 1636
RseI	CAYNNNNRTG	3 cut(s)	587, 1538, 1827
SacI	GAGCTC	1 cut(s)	2139
SatI	GCNGC	5 cut(s)	930, 1260, 1272, 2008, 2076
Sau96I	GGNCC	5 cut(s)	744, 995, 1060, 1833, 1992
ScaI	AGTACT	2 cut(s)	18, 967
SchI	GAGTC	1 cut(s)	1195
ScrFI	CCNGG	4 cut(s)	548, 908, 993, 1640
SduI	GDGCHC	3 cut(s)	11, 1354, 2139
SfaNI	GCATC	9 cut(s)	61, 408, 639, 721, 1226, 1425, 1487, 1664, 1854
SfcI	CTRYAG	1 cut(s)	1257
Sfr274I	CTCGAG	1 cut(s)	1662
SinI	GGWCC	4 cut(s)	744, 995, 1060, 1833
SlaI	CTCGAG	1 cut(s)	1662
SmiMI	CAYNNNNRTG	3 cut(s)	587, 1538, 1827
SmlI	CTYRAG	3 cut(s)	159, 1662, 2387
SmoI	CTYRAG	3 cut(s)	159, 1662, 2387
SnaBI	TACGTA	1 cut(s)	1811
SphI	GCATGC	1 cut(s)	1427
SsiI	CCGC	5 cut(s)	137, 450, 1613, 1747, 1893
SspI	AATATT	2 cut(s)	753, 1583
SspMI	CTAG	1 cut(s)	2360
SstI	GAGCTC	1 cut(s)	2139
StyD4I	CCNGG	4 cut(s)	546, 906, 991, 1638
StyI	CCWWGG	2 cut(s)	945, 1776
TaiI	ACGT	7 cut(s)	468, 479, 717, 1030, 1788, 1813, 2133
TatI	WGTACW	5 cut(s)	16, 61, 868, 965, 1542
TfiI	GAWTC	4 cut(s)	221, 484, 1609, 1682
TscAI	CASTG	3 cut(s)	87, 378, 727
TseFI	GTSAC	1 cut(s)	692
TseI	GCWGC	5 cut(s)	929, 1259, 1271, 2007, 2075
Tsp45I	GTSAC	1 cut(s)	692
TspGWI	ACGGA	5 cut(s)	507, 1172, 1182, 1844, 1977
TspRI	CASTG	3 cut(s)	87, 378, 727
Van91I	CCANNNNNTGG	1 cut(s)	1842
VneI	GTGCAC	1 cut(s)	7
VpaK11BI	GGWCC	4 cut(s)	744, 995, 1060, 1833
XagI	CCTNNNNNAGG	1 cut(s)	2295
XapI	RAATTY	4 cut(s)	108, 898, 1404, 1464
XceI	RCATGY	1 cut(s)	1427
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1810, 1843
XhoI	CTCGAG	1 cut(s)	1662
XmiI	GTMKAC	1 cut(s)	2091
XmnI	GAANNNNTTC	1 cut(s)	388
XspI	CTAG	1 cut(s)	2360
ZraI	GACGTC	1 cut(s)	715
ZrmI	AGTACT	2 cut(s)	18, 967

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.