Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08820 |
| fragaria_vesca | FvH4_6g10271 |
| malus_domestica | MD04G1168200.v1.1 MD09G1180100.v1.1 |
| prunus_persica | Prupe.6G286400_v2.0.a1 |
| pyrus_communis | pycom04g01680 pycom04g14920 |
| rosa_chinensis | RchiOBHm_Chr3g0461021 |
| rosa_laevigata | RLG00000024957 |
| rosa_multiflora | Rmu_co8035226.1_g000001 Rmu_sc0000601.1_g000001 Rmu_sc0000601.1_g000002 |
| rosa_rugosa | Rorug03G0047900 |
| rosa_samantha | Rh3AG105200 Rh3BG109200 Rh3DG110900 |
| rosa_wichuraiana | Rw3G009010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 113 |
| AciI | CCGC | 1 cut(s) | 281 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AfaI | GTAC | 2 cut(s) | 239, 257 |
| AflIII | ACRYGT | 1 cut(s) | 275 |
| AgsI | TTSAA | 1 cut(s) | 245 |
| AluBI | AGCT | 2 cut(s) | 248, 266 |
| AluI | AGCT | 2 cut(s) | 248, 266 |
| AsuC2I | CCSGG | 1 cut(s) | 100 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| BccI | CCATC | 1 cut(s) | 288 |
| BceAI | ACGGC | 1 cut(s) | 209 |
| BcnI | CCSGG | 1 cut(s) | 100 |
| BisI | GCNGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 1 cut(s) | 283 |
| Bme1390I | CCNGG | 1 cut(s) | 100 |
| BmrFI | CCNGG | 1 cut(s) | 100 |
| BmsI | GCATC | 1 cut(s) | 37 |
| BpuMI | CCSGG | 1 cut(s) | 100 |
| BsaAI | YACGTR | 1 cut(s) | 276 |
| Bse118I | RCCGGY | 1 cut(s) | 252 |
| Bsh1285I | CGRYCG | 1 cut(s) | 53 |
| BsiEI | CGRYCG | 1 cut(s) | 53 |
| BsiSI | CCGG | 3 cut(s) | 99, 197, 253 |
| Bsp143I | GATC | 1 cut(s) | 50 |
| BspACI | CCGC | 1 cut(s) | 281 |
| BsrFI | RCCGGY | 1 cut(s) | 252 |
| BssAI | RCCGGY | 1 cut(s) | 252 |
| BssMI | GATC | 1 cut(s) | 50 |
| BstBAI | YACGTR | 1 cut(s) | 276 |
| BstC8I | GCNNGC | 1 cut(s) | 250 |
| BstKTI | GATC | 1 cut(s) | 53 |
| BstMBI | GATC | 1 cut(s) | 50 |
| BstMCI | CGRYCG | 1 cut(s) | 53 |
| BstNSI | RCATGY | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 250 |
| Cfr10I | RCCGGY | 1 cut(s) | 252 |
| Csp6I | GTAC | 2 cut(s) | 238, 256 |
| CviAII | CATG | 1 cut(s) | 170 |
| CviJI | RGCY | 3 cut(s) | 248, 266, 284 |
| CviKI_1 | RGCY | 3 cut(s) | 248, 266, 284 |
| CviQI | GTAC | 2 cut(s) | 238, 256 |
| DpnI | GATC | 1 cut(s) | 52 |
| DpnII | GATC | 1 cut(s) | 50 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 113 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 113 |
| FaeI | CATG | 1 cut(s) | 173 |
| FaiI | YATR | 5 cut(s) | 81, 120, 147, 171, 177 |
| FatI | CATG | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 1 cut(s) | 282 |
| Fsp4HI | GCNGC | 1 cut(s) | 282 |
| GluI | GCNGC | 1 cut(s) | 282 |
| HapII | CCGG | 3 cut(s) | 99, 197, 253 |
| Hin1II | CATG | 1 cut(s) | 173 |
| HinfI | GANTC | 1 cut(s) | 4 |
| HpaII | CCGG | 3 cut(s) | 99, 197, 253 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 3 cut(s) | 33, 55, 72 |
| Hpy188III | TCNNGA | 1 cut(s) | 8 |
| HpyCH4IV | ACGT | 2 cut(s) | 75, 275 |
| HpyCH4V | TGCA | 3 cut(s) | 28, 149, 173 |
| HpySE526I | ACGT | 2 cut(s) | 75, 275 |
| Hsp92II | CATG | 1 cut(s) | 173 |
| Kzo9I | GATC | 1 cut(s) | 50 |
| LpnPI | CCDG | 5 cut(s) | 21, 112, 142, 210, 266 |
| LweI | GCATC | 1 cut(s) | 37 |
| MaeII | ACGT | 2 cut(s) | 75, 275 |
| MalI | GATC | 1 cut(s) | 52 |
| MboI | GATC | 1 cut(s) | 50 |
| MfeI | CAATTG | 1 cut(s) | 62 |
| MluCI | AATT | 1 cut(s) | 62 |
| MmeI | TCCRAC | 1 cut(s) | 269 |
| MnlI | CCTC | 2 cut(s) | 10, 39 |
| MseI | TTAA | 1 cut(s) | 123 |
| MspI | CCGG | 3 cut(s) | 99, 197, 253 |
| MspR9I | CCNGG | 1 cut(s) | 100 |
| MunI | CAATTG | 1 cut(s) | 62 |
| NciI | CCSGG | 1 cut(s) | 100 |
| NdeII | GATC | 1 cut(s) | 50 |
| NlaIII | CATG | 1 cut(s) | 173 |
| NspI | RCATGY | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| PkrI | GCNGC | 1 cut(s) | 283 |
| Ple19I | CGATCG | 1 cut(s) | 53 |
| Ppu21I | YACGTR | 1 cut(s) | 276 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| PvuI | CGATCG | 1 cut(s) | 53 |
| RsaI | GTAC | 2 cut(s) | 239, 257 |
| RsaNI | GTAC | 2 cut(s) | 238, 256 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| SatI | GCNGC | 1 cut(s) | 282 |
| Sau3AI | GATC | 1 cut(s) | 50 |
| ScrFI | CCNGG | 1 cut(s) | 100 |
| SetI | ASST | 6 cut(s) | 21, 78, 131, 250, 268, 278 |
| SfaNI | GCATC | 1 cut(s) | 37 |
| Sse9I | AATT | 1 cut(s) | 62 |
| SsiI | CCGC | 1 cut(s) | 281 |
| StyD4I | CCNGG | 1 cut(s) | 98 |
| TaiI | ACGT | 2 cut(s) | 78, 278 |
| TaqI | TCGA | 1 cut(s) | 105 |
| TasI | AATT | 1 cut(s) | 62 |
| TauI | GCSGC | 1 cut(s) | 284 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| TspDTI | ATGAA | 3 cut(s) | 17, 68, 204 |
| XceI | RCATGY | 1 cut(s) | 173 |