Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08820 |
| fragaria_vesca | FvH4_6g10271 |
| malus_domestica | MD04G1168200.v1.1 MD09G1180100.v1.1 |
| prunus_persica | Prupe.6G286400_v2.0.a1 |
| pyrus_communis | pycom04g01680 pycom04g14920 |
| rosa_chinensis | RchiOBHm_Chr3g0461021 |
| rosa_laevigata | RLG00000024957 |
| rosa_multiflora | Rmu_co8035226.1_g000001 Rmu_sc0000601.1_g000001 Rmu_sc0000601.1_g000002 |
| rosa_rugosa | Rorug03G0047900 |
| rosa_samantha | Rh3AG105200 Rh3BG109200 Rh3DG110900 |
| rosa_wichuraiana | Rw3G009010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2157 |
| AarI | CACCTGC | 1 cut(s) | 2014 |
| AatII | GACGTC | 1 cut(s) | 1808 |
| Acc36I | ACCTGC | 1 cut(s) | 2014 |
| AccII | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| AclWI | GGATC | 3 cut(s) | 1389, 1497, 2102 |
| AcoI | YGGCCR | 4 cut(s) | 12, 133, 1390, 1482 |
| AcsI | RAATTY | 2 cut(s) | 931, 1038 |
| AcuI | CTGAAG | 3 cut(s) | 422, 1964, 2106 |
| AcyI | GRCGYC | 1 cut(s) | 1805 |
| AfaI | GTAC | 4 cut(s) | 205, 1063, 1787, 2045 |
| AflIII | ACRYGT | 2 cut(s) | 1077, 1189 |
| AhlI | ACTAGT | 1 cut(s) | 458 |
| AjnI | CCWGG | 3 cut(s) | 135, 1674, 2149 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1617, 1649 |
| AleI | CACNNNNGTG | 1 cut(s) | 416 |
| Alw21I | GWGCWC | 3 cut(s) | 994, 1828, 1845 |
| Alw26I | GTCTC | 2 cut(s) | 44, 1895 |
| AlwI | GGATC | 3 cut(s) | 1389, 1497, 2102 |
| ApeKI | GCWGC | 4 cut(s) | 115, 1160, 1499, 1911 |
| ApoI | RAATTY | 2 cut(s) | 931, 1038 |
| AseI | ATTAAT | 1 cut(s) | 2016 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1256 |
| AspLEI | GCGC | 3 cut(s) | 168, 808, 1939 |
| AspS9I | GGNCC | 4 cut(s) | 189, 385, 904, 1102 |
| AsuC2I | CCSGG | 2 cut(s) | 260, 565 |
| AsuHPI | GGTGA | 3 cut(s) | 70, 206, 1603 |
| AsuNHI | GCTAGC | 1 cut(s) | 1013 |
| AvaII | GGWCC | 4 cut(s) | 189, 385, 904, 1102 |
| BaeGI | GKGCMC | 1 cut(s) | 1866 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 187, 220 |
| BalI | TGGCCA | 2 cut(s) | 14, 1484 |
| BanII | GRGCYC | 4 cut(s) | 231, 994, 1828, 1845 |
| BauI | CACGAG | 1 cut(s) | 1442 |
| BbsI | GAAGAC | 1 cut(s) | 2112 |
| Bbv12I | GWGCWC | 3 cut(s) | 994, 1828, 1845 |
| BbvI | GCAGC | 4 cut(s) | 102, 1172, 1511, 1923 |
| BccI | CCATC | 5 cut(s) | 619, 730, 815, 1749, 1891 |
| BceAI | ACGGC | 4 cut(s) | 539, 884, 1293, 1377 |
| BciT130I | CCWGG | 3 cut(s) | 137, 1676, 2151 |
| BciVI | GTATCC | 1 cut(s) | 1978 |
| BcnI | CCSGG | 2 cut(s) | 260, 565 |
| BcoDI | GTCTC | 2 cut(s) | 44, 1895 |
| BcuI | ACTAGT | 1 cut(s) | 458 |
| BfaI | CTAG | 6 cut(s) | 459, 981, 995, 1001, 1014, 1332 |
| BfmI | CTRYAG | 1 cut(s) | 1848 |
| BfuAI | ACCTGC | 1 cut(s) | 2014 |
| BfuI | GTATCC | 1 cut(s) | 1978 |
| BisI | GCNGC | 7 cut(s) | 116, 1161, 1500, 1663, 1912, 1940, 2053 |
| BlsI | GCNGC | 7 cut(s) | 117, 1162, 1501, 1664, 1913, 1941, 2054 |
| Bme1390I | CCNGG | 5 cut(s) | 137, 260, 565, 1676, 2151 |
| Bme18I | GGWCC | 4 cut(s) | 189, 385, 904, 1102 |
| BmgT120I | GGNCC | 4 cut(s) | 189, 385, 904, 1102 |
| BmiI | GGNNCC | 2 cut(s) | 1350, 1748 |
| BmrFI | CCNGG | 5 cut(s) | 137, 260, 565, 1676, 2151 |
| BmsI | GCATC | 5 cut(s) | 280, 884, 954, 2062, 2114 |
| BmtI | GCTAGC | 1 cut(s) | 1017 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1334 |
| BpiI | GAAGAC | 1 cut(s) | 2112 |
| BpuEI | CTTGAG | 1 cut(s) | 80 |
| BpuMI | CCSGG | 2 cut(s) | 260, 565 |
| BsaBI | GATNNNNATC | 1 cut(s) | 874 |
| BsaHI | GRCGYC | 1 cut(s) | 1805 |
| BsaI | GGTCTC | 1 cut(s) | 44 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1940, 1970 |
| Bse118I | RCCGGY | 2 cut(s) | 1502, 2006 |
| Bse1I | ACTGG | 1 cut(s) | 15 |
| Bse3DI | GCAATG | 1 cut(s) | 1593 |
| Bse8I | GATNNNNATC | 1 cut(s) | 874 |
| BseBI | CCWGG | 3 cut(s) | 137, 1676, 2151 |
| BseGI | GGATG | 7 cut(s) | 741, 969, 1134, 1283, 1376, 1414, 2185 |
| BseJI | GATNNNNATC | 1 cut(s) | 874 |
| BseMI | GCAATG | 1 cut(s) | 1593 |
| BseMII | CTCAG | 4 cut(s) | 519, 602, 638, 822 |
| BseNI | ACTGG | 1 cut(s) | 15 |
| BseSI | GKGCMC | 1 cut(s) | 1866 |
| BseXI | GCAGC | 4 cut(s) | 102, 1172, 1511, 1923 |
| BseYI | CCCAGC | 1 cut(s) | 578 |
| Bsh1236I | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| BsiHKAI | GWGCWC | 3 cut(s) | 994, 1828, 1845 |
| BsiSI | CCGG | 4 cut(s) | 259, 564, 1503, 2007 |
| BslFI | GGGAC | 3 cut(s) | 10, 1423, 2049 |
| BsmAI | GTCTC | 2 cut(s) | 44, 1895 |
| BsmFI | GGGAC | 3 cut(s) | 10, 1423, 2049 |
| BsmI | GAATGC | 2 cut(s) | 1162, 1967 |
| Bso31I | GGTCTC | 1 cut(s) | 44 |
| Bsp1286I | GDGCHC | 5 cut(s) | 231, 994, 1828, 1845, 1866 |
| Bsp143I | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| Bsp19I | CCATGG | 1 cut(s) | 954 |
| BspCNI | CTCAG | 4 cut(s) | 520, 603, 639, 823 |
| BspFNI | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| BspLI | GGNNCC | 2 cut(s) | 1350, 1748 |
| BspMAI | CTGCAG | 1 cut(s) | 1852 |
| BspMI | ACCTGC | 1 cut(s) | 2014 |
| BspOI | GCTAGC | 1 cut(s) | 1017 |
| BspPI | GGATC | 3 cut(s) | 1389, 1497, 2102 |
| BspTNI | GGTCTC | 1 cut(s) | 44 |
| BsrDI | GCAATG | 1 cut(s) | 1593 |
| BsrFI | RCCGGY | 2 cut(s) | 1502, 2006 |
| BsrI | ACTGG | 1 cut(s) | 15 |
| BssAI | RCCGGY | 2 cut(s) | 1502, 2006 |
| BssMI | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| BssNI | GRCGYC | 1 cut(s) | 1805 |
| BssSI | CACGAG | 1 cut(s) | 1442 |
| BssT1I | CCWWGG | 5 cut(s) | 9, 39, 954, 1105, 1485 |
| Bst2BI | CACGAG | 1 cut(s) | 1442 |
| Bst2UI | CCWGG | 3 cut(s) | 137, 1676, 2151 |
| Bst4CI | ACNGT | 2 cut(s) | 208, 308 |
| Bst6I | CTCTTC | 2 cut(s) | 914, 1539 |
| BstACI | GRCGYC | 1 cut(s) | 1805 |
| BstC8I | GCNNGC | 6 cut(s) | 102, 1015, 1268, 1482, 1590, 2008 |
| BstDEI | CTNAG | 4 cut(s) | 528, 611, 647, 831 |
| BstDSI | CCRYGG | 3 cut(s) | 900, 954, 1518 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 134 |
| BstF5I | GGATG | 7 cut(s) | 741, 969, 1134, 1283, 1376, 1414, 2185 |
| BstFNI | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| BstHHI | GCGC | 3 cut(s) | 168, 808, 1939 |
| BstKTI | GATC | 5 cut(s) | 1384, 1492, 1701, 1716, 2097 |
| BstMAI | GTCTC | 2 cut(s) | 44, 1895 |
| BstMBI | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 97, 668, 1662, 1668, 1789 |
| BstNI | CCWGG | 3 cut(s) | 137, 1676, 2151 |
| BstNSI | RCATGY | 4 cut(s) | 104, 503, 1081, 1193 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1334 |
| BstSCI | CCNGG | 5 cut(s) | 135, 258, 563, 1674, 2149 |
| BstSFI | CTRYAG | 1 cut(s) | 1848 |
| BstSLI | GKGCMC | 1 cut(s) | 1866 |
| BstUI | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| BstV1I | GCAGC | 4 cut(s) | 102, 1172, 1511, 1923 |
| BstV2I | GAAGAC | 1 cut(s) | 2112 |
| BstX2I | RGATCY | 2 cut(s) | 1381, 1489 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 46 |
| BstYI | RGATCY | 2 cut(s) | 1381, 1489 |
| BsuI | GTATCC | 1 cut(s) | 1978 |
| BtgI | CCRYGG | 3 cut(s) | 900, 954, 1518 |
| BtgZI | GCGATG | 1 cut(s) | 1178 |
| BtsCI | GGATG | 7 cut(s) | 741, 969, 1134, 1283, 1376, 1414, 2185 |
| BtsI | GCAGTG | 4 cut(s) | 65, 703, 1614, 1845 |
| BtsIMutI | CAGTG | 4 cut(s) | 65, 703, 1614, 1845 |
| BveI | ACCTGC | 1 cut(s) | 2014 |
| Cac8I | GCNNGC | 6 cut(s) | 102, 1015, 1268, 1482, 1590, 2008 |
| CfoI | GCGC | 3 cut(s) | 168, 808, 1939 |
| Cfr10I | RCCGGY | 2 cut(s) | 1502, 2006 |
| Cfr13I | GGNCC | 4 cut(s) | 189, 385, 904, 1102 |
| CseI | GACGC | 3 cut(s) | 797, 1807, 2122 |
| CsiI | ACCWGGT | 1 cut(s) | 2149 |
| Csp6I | GTAC | 4 cut(s) | 204, 1062, 1786, 2044 |
| CviQI | GTAC | 4 cut(s) | 204, 1062, 1786, 2044 |
| DdeI | CTNAG | 4 cut(s) | 528, 611, 647, 831 |
| DpnI | GATC | 5 cut(s) | 1383, 1491, 1700, 1715, 2096 |
| DpnII | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| DraI | TTTAAA | 1 cut(s) | 1123 |
| EaeI | YGGCCR | 4 cut(s) | 12, 133, 1390, 1482 |
| Eam1104I | CTCTTC | 2 cut(s) | 914, 1539 |
| EarI | CTCTTC | 2 cut(s) | 914, 1539 |
| EciI | GGCGGA | 2 cut(s) | 160, 202 |
| Ecl136II | GAGCTC | 3 cut(s) | 992, 1826, 1843 |
| Eco130I | CCWWGG | 5 cut(s) | 9, 39, 954, 1105, 1485 |
| Eco147I | AGGCCT | 2 cut(s) | 75, 637 |
| Eco24I | GRGCYC | 4 cut(s) | 231, 994, 1828, 1845 |
| Eco31I | GGTCTC | 1 cut(s) | 44 |
| Eco47I | GGWCC | 4 cut(s) | 189, 385, 904, 1102 |
| Eco53kI | GAGCTC | 3 cut(s) | 992, 1826, 1843 |
| Eco57I | CTGAAG | 3 cut(s) | 422, 1964, 2106 |
| EcoICRI | GAGCTC | 3 cut(s) | 992, 1826, 1843 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 134 |
| EcoRII | CCWGG | 3 cut(s) | 135, 1674, 2149 |
| EcoT14I | CCWWGG | 5 cut(s) | 9, 39, 954, 1105, 1485 |
| EcoT22I | ATGCAT | 1 cut(s) | 877 |
| EcoT38I | GRGCYC | 4 cut(s) | 231, 994, 1828, 1845 |
| ErhI | CCWWGG | 5 cut(s) | 9, 39, 954, 1105, 1485 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 314, 346, 795, 827 |
| FaqI | GGGAC | 3 cut(s) | 10, 1423, 2049 |
| FauI | CCCGC | 1 cut(s) | 1390 |
| Fnu4HI | GCNGC | 7 cut(s) | 116, 1161, 1500, 1663, 1912, 1940, 2053 |
| FokI | GGATG | 7 cut(s) | 748, 976, 1141, 1290, 1383, 1421, 2192 |
| FriOI | GRGCYC | 4 cut(s) | 231, 994, 1828, 1845 |
| Fsp4HI | GCNGC | 7 cut(s) | 116, 1161, 1500, 1663, 1912, 1940, 2053 |
| FspBI | CTAG | 6 cut(s) | 459, 981, 995, 1001, 1014, 1332 |
| GlaI | GCGC | 3 cut(s) | 167, 807, 1938 |
| GluI | GCNGC | 7 cut(s) | 116, 1161, 1500, 1663, 1912, 1940, 2053 |
| GsaI | CCCAGC | 1 cut(s) | 582 |
| HapII | CCGG | 4 cut(s) | 259, 564, 1503, 2007 |
| HgaI | GACGC | 3 cut(s) | 797, 1807, 2122 |
| HhaI | GCGC | 3 cut(s) | 168, 808, 1939 |
| Hin1I | GRCGYC | 1 cut(s) | 1805 |
| Hin6I | GCGC | 3 cut(s) | 166, 806, 1937 |
| HinP1I | GCGC | 3 cut(s) | 166, 806, 1937 |
| HindIII | AAGCTT | 1 cut(s) | 1413 |
| HinfI | GANTC | 7 cut(s) | 300, 406, 862, 1737, 2168, 2174, 2195 |
| HpaII | CCGG | 4 cut(s) | 259, 564, 1503, 2007 |
| HphI | GGTGA | 3 cut(s) | 70, 206, 1603 |
| Hpy166II | GTNNAC | 2 cut(s) | 904, 1027 |
| Hpy188III | TCNNGA | 6 cut(s) | 244, 424, 981, 995, 1170, 1724 |
| Hpy8I | GTNNAC | 2 cut(s) | 904, 1027 |
| Hpy99I | CGWCG | 5 cut(s) | 1478, 1807, 1810, 1813, 1823 |
| HpyCH4III | ACNGT | 2 cut(s) | 208, 308 |
| HpyCH4IV | ACGT | 1 cut(s) | 1805 |
| HpyCH4V | TGCA | 8 cut(s) | 32, 293, 875, 922, 1160, 1850, 2023, 2162 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 97, 668, 1662, 1668, 1789 |
| HpyF3I | CTNAG | 4 cut(s) | 528, 611, 647, 831 |
| HpySE526I | ACGT | 1 cut(s) | 1805 |
| Hsp92I | GRCGYC | 1 cut(s) | 1805 |
| HspAI | GCGC | 3 cut(s) | 166, 806, 1937 |
| KroI | GCCGGC | 1 cut(s) | 2006 |
| KroNI | GCCGGC | 1 cut(s) | 2008 |
| Kzo9I | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| LmnI | GCTCC | 8 cut(s) | 173, 575, 989, 1095, 1354, 1558, 1823, 1831 |
| Lsp1109I | GCAGC | 4 cut(s) | 102, 1172, 1511, 1923 |
| LweI | GCATC | 5 cut(s) | 280, 884, 954, 2062, 2114 |
| MabI | ACCWGGT | 1 cut(s) | 2149 |
| MaeI | CTAG | 6 cut(s) | 459, 981, 995, 1001, 1014, 1332 |
| MaeII | ACGT | 1 cut(s) | 1805 |
| MaeIII | GTNAC | 2 cut(s) | 791, 1574 |
| MalI | GATC | 5 cut(s) | 1383, 1491, 1700, 1715, 2096 |
| MboI | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| MfeI | CAATTG | 1 cut(s) | 392 |
| MflI | RGATCY | 2 cut(s) | 1381, 1489 |
| MhlI | GDGCHC | 5 cut(s) | 231, 994, 1828, 1845, 1866 |
| MlsI | TGGCCA | 2 cut(s) | 14, 1484 |
| MluCI | AATT | 8 cut(s) | 33, 392, 715, 931, 1018, 1038, 1854, 2183 |
| MluNI | TGGCCA | 2 cut(s) | 14, 1484 |
| MmeI | TCCRAC | 7 cut(s) | 600, 1386, 1476, 1538, 1801, 1866, 1938 |
| Mox20I | TGGCCA | 2 cut(s) | 14, 1484 |
| Mph1103I | ATGCAT | 1 cut(s) | 877 |
| MroNI | GCCGGC | 1 cut(s) | 2006 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1256 |
| MscI | TGGCCA | 2 cut(s) | 14, 1484 |
| MseI | TTAA | 3 cut(s) | 1122, 1752, 2016 |
| MslI | CAYNNNNRTG | 3 cut(s) | 416, 1259, 1765 |
| Msp20I | TGGCCA | 2 cut(s) | 14, 1484 |
| MspA1I | CMGCKG | 1 cut(s) | 1942 |
| MspI | CCGG | 4 cut(s) | 259, 564, 1503, 2007 |
| MspR9I | CCNGG | 5 cut(s) | 137, 260, 565, 1676, 2151 |
| MunI | CAATTG | 1 cut(s) | 392 |
| Mva1269I | GAATGC | 2 cut(s) | 1162, 1967 |
| MvaI | CCWGG | 3 cut(s) | 137, 1676, 2151 |
| MvnI | CGCG | 5 cut(s) | 808, 1466, 1656, 1937, 2116 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 97, 668, 1662, 1668, 1789 |
| NaeI | GCCGGC | 1 cut(s) | 2008 |
| NciI | CCSGG | 2 cut(s) | 260, 565 |
| NcoI | CCATGG | 1 cut(s) | 954 |
| NdeII | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| NgoMIV | GCCGGC | 1 cut(s) | 2006 |
| NheI | GCTAGC | 1 cut(s) | 1013 |
| NlaIV | GGNNCC | 2 cut(s) | 1350, 1748 |
| NmeAIII | GCCGAG | 3 cut(s) | 91, 105, 111 |
| NmuCI | GTSAC | 1 cut(s) | 1574 |
| NsiI | ATGCAT | 1 cut(s) | 877 |
| NspI | RCATGY | 4 cut(s) | 104, 503, 1081, 1193 |
| OliI | CACNNNNGTG | 1 cut(s) | 416 |
| PaeI | GCATGC | 1 cut(s) | 104 |
| PaqCI | CACCTGC | 1 cut(s) | 2014 |
| PceI | AGGCCT | 2 cut(s) | 75, 637 |
| PciI | ACATGT | 2 cut(s) | 1077, 1189 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 204, 1449, 1470, 1533 |
| PctI | GAATGC | 2 cut(s) | 1162, 1967 |
| PdiI | GCCGGC | 1 cut(s) | 2008 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1256 |
| PfeI | GAWTC | 6 cut(s) | 300, 406, 862, 1737, 2168, 2174 |
| PflFI | GACNNNGTC | 2 cut(s) | 1807, 2116 |
| PkrI | GCNGC | 7 cut(s) | 117, 1162, 1501, 1664, 1913, 1941, 2054 |
| PscI | ACATGT | 2 cut(s) | 1077, 1189 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1334 |
| PshBI | ATTAAT | 1 cut(s) | 2016 |
| PsiI | TTATAA | 1 cut(s) | 2157 |
| Psp124BI | GAGCTC | 3 cut(s) | 994, 1828, 1845 |
| Psp6I | CCWGG | 3 cut(s) | 135, 1674, 2149 |
| PspFI | CCCAGC | 1 cut(s) | 578 |
| PspGI | CCWGG | 3 cut(s) | 135, 1674, 2149 |
| PspN4I | GGNNCC | 2 cut(s) | 1350, 1748 |
| PspPI | GGNCC | 4 cut(s) | 189, 385, 904, 1102 |
| PstI | CTGCAG | 1 cut(s) | 1852 |
| PsuI | RGATCY | 2 cut(s) | 1381, 1489 |
| PsyI | GACNNNGTC | 2 cut(s) | 1807, 2116 |
| RsaI | GTAC | 4 cut(s) | 205, 1063, 1787, 2045 |
| RsaNI | GTAC | 4 cut(s) | 204, 1062, 1786, 2044 |
| RseI | CAYNNNNRTG | 3 cut(s) | 416, 1259, 1765 |
| SacI | GAGCTC | 3 cut(s) | 994, 1828, 1845 |
| SaqAI | TTAA | 3 cut(s) | 1122, 1752, 2016 |
| SatI | GCNGC | 7 cut(s) | 116, 1161, 1500, 1663, 1912, 1940, 2053 |
| Sau3AI | GATC | 5 cut(s) | 1381, 1489, 1698, 1713, 2094 |
| Sau96I | GGNCC | 4 cut(s) | 189, 385, 904, 1102 |
| ScrFI | CCNGG | 5 cut(s) | 137, 260, 565, 1676, 2151 |
| SduI | GDGCHC | 5 cut(s) | 231, 994, 1828, 1845, 1866 |
| SexAI | ACCWGGT | 1 cut(s) | 2149 |
| SfaNI | GCATC | 5 cut(s) | 280, 884, 954, 2062, 2114 |
| SfcI | CTRYAG | 1 cut(s) | 1848 |
| SinI | GGWCC | 4 cut(s) | 189, 385, 904, 1102 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 416, 1259, 1765 |
| SmlI | CTYRAG | 1 cut(s) | 95 |
| SmoI | CTYRAG | 1 cut(s) | 95 |
| SpeI | ACTAGT | 1 cut(s) | 458 |
| SphI | GCATGC | 1 cut(s) | 104 |
| Sse9I | AATT | 8 cut(s) | 33, 392, 715, 931, 1018, 1038, 1854, 2183 |
| SseBI | AGGCCT | 2 cut(s) | 75, 637 |
| SspMI | CTAG | 6 cut(s) | 459, 981, 995, 1001, 1014, 1332 |
| SstI | GAGCTC | 3 cut(s) | 994, 1828, 1845 |
| StuI | AGGCCT | 2 cut(s) | 75, 637 |
| StyD4I | CCNGG | 5 cut(s) | 135, 258, 563, 1674, 2149 |
| StyI | CCWWGG | 5 cut(s) | 9, 39, 954, 1105, 1485 |
| TaaI | ACNGT | 2 cut(s) | 208, 308 |
| TaiI | ACGT | 1 cut(s) | 1808 |
| TasI | AATT | 8 cut(s) | 33, 392, 715, 931, 1018, 1038, 1854, 2183 |
| TatI | WGTACW | 1 cut(s) | 2043 |
| TauI | GCSGC | 3 cut(s) | 1665, 1942, 2055 |
| TfiI | GAWTC | 6 cut(s) | 300, 406, 862, 1737, 2168, 2174 |
| Tru1I | TTAA | 3 cut(s) | 1122, 1752, 2016 |
| Tru9I | TTAA | 3 cut(s) | 1122, 1752, 2016 |
| TscAI | CASTG | 4 cut(s) | 65, 703, 1621, 1852 |
| TseFI | GTSAC | 1 cut(s) | 1574 |
| TseI | GCWGC | 4 cut(s) | 115, 1160, 1499, 1911 |
| Tsp45I | GTSAC | 1 cut(s) | 1574 |
| TspGWI | ACGGA | 3 cut(s) | 740, 1200, 1535 |
| TspRI | CASTG | 4 cut(s) | 65, 703, 1621, 1852 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1807, 2116 |
| VpaK11BI | GGWCC | 4 cut(s) | 189, 385, 904, 1102 |
| VspI | ATTAAT | 1 cut(s) | 2016 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 134 |
| XapI | RAATTY | 2 cut(s) | 931, 1038 |
| XbaI | TCTAGA | 2 cut(s) | 980, 994 |
| XceI | RCATGY | 4 cut(s) | 104, 503, 1081, 1193 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1256 |
| XspI | CTAG | 6 cut(s) | 459, 981, 995, 1001, 1014, 1332 |
| ZraI | GACGTC | 1 cut(s) | 1806 |
| Zsp2I | ATGCAT | 1 cut(s) | 877 |