Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08820 |
| fragaria_vesca | FvH4_6g10271 |
| malus_domestica | MD04G1168200.v1.1 MD09G1180100.v1.1 |
| prunus_persica | Prupe.6G286400_v2.0.a1 |
| pyrus_communis | pycom04g01680 pycom04g14920 |
| rosa_chinensis | RchiOBHm_Chr3g0461021 |
| rosa_laevigata | RLG00000024957 |
| rosa_multiflora | Rmu_co8035226.1_g000001 Rmu_sc0000601.1_g000001 Rmu_sc0000601.1_g000002 |
| rosa_rugosa | Rorug03G0047900 |
| rosa_samantha | Rh3AG105200 Rh3BG109200 Rh3DG110900 |
| rosa_wichuraiana | Rw3G009010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 155, 458 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 308 |
| AgsI | TTSAA | 2 cut(s) | 14, 53 |
| AhlI | ACTAGT | 1 cut(s) | 108 |
| AluBI | AGCT | 3 cut(s) | 228, 246, 480 |
| AluI | AGCT | 3 cut(s) | 228, 246, 480 |
| AoxI | GGCC | 1 cut(s) | 285 |
| AspLEI | GCGC | 2 cut(s) | 155, 458 |
| AsuC2I | CCSGG | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| BbsI | GAAGAC | 1 cut(s) | 81 |
| BccI | CCATC | 3 cut(s) | 269, 380, 465 |
| BceAI | ACGGC | 1 cut(s) | 189 |
| BcnI | CCSGG | 1 cut(s) | 215 |
| BcuI | ACTAGT | 1 cut(s) | 108 |
| BfaI | CTAG | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 1 cut(s) | 215 |
| BmrFI | CCNGG | 1 cut(s) | 215 |
| BmsI | GCATC | 1 cut(s) | 534 |
| BpiI | GAAGAC | 1 cut(s) | 81 |
| BpuMI | CCSGG | 1 cut(s) | 215 |
| BsaBI | GATNNNNATC | 1 cut(s) | 524 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bse8I | GATNNNNATC | 1 cut(s) | 524 |
| BseGI | GGATG | 1 cut(s) | 391 |
| BseJI | GATNNNNATC | 1 cut(s) | 524 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BseMII | CTCAG | 3 cut(s) | 169, 252, 472 |
| BseYI | CCCAGC | 1 cut(s) | 228 |
| Bsh1236I | CGCG | 2 cut(s) | 155, 458 |
| BshFI | GGCC | 1 cut(s) | 287 |
| BsiSI | CCGG | 1 cut(s) | 214 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BsnI | GGCC | 1 cut(s) | 287 |
| BspANI | GGCC | 1 cut(s) | 287 |
| BspCNI | CTCAG | 3 cut(s) | 170, 253, 473 |
| BspFNI | CGCG | 2 cut(s) | 155, 458 |
| BstDEI | CTNAG | 4 cut(s) | 178, 261, 297, 481 |
| BstF5I | GGATG | 1 cut(s) | 391 |
| BstFNI | CGCG | 2 cut(s) | 155, 458 |
| BstHHI | GCGC | 2 cut(s) | 155, 458 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstNSI | RCATGY | 1 cut(s) | 153 |
| BstSCI | CCNGG | 1 cut(s) | 213 |
| BstUI | CGCG | 2 cut(s) | 155, 458 |
| BstV2I | GAAGAC | 1 cut(s) | 81 |
| BsuRI | GGCC | 1 cut(s) | 287 |
| BtsCI | GGATG | 1 cut(s) | 391 |
| BtsI | GCAGTG | 1 cut(s) | 353 |
| BtsIMutI | CAGTG | 1 cut(s) | 353 |
| CfoI | GCGC | 2 cut(s) | 155, 458 |
| CseI | GACGC | 1 cut(s) | 447 |
| CviAII | CATG | 3 cut(s) | 150, 446, 509 |
| CviJI | RGCY | 8 cut(s) | 228, 246, 287, 301, 312, 408, 480, 536 |
| CviKI_1 | RGCY | 8 cut(s) | 228, 246, 287, 301, 312, 408, 480, 536 |
| DdeI | CTNAG | 4 cut(s) | 178, 261, 297, 481 |
| Eco147I | AGGCCT | 1 cut(s) | 287 |
| EcoT22I | ATGCAT | 1 cut(s) | 527 |
| FaeI | CATG | 3 cut(s) | 153, 449, 512 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 445, 477 |
| FatI | CATG | 3 cut(s) | 149, 445, 508 |
| FokI | GGATG | 1 cut(s) | 398 |
| FspBI | CTAG | 1 cut(s) | 109 |
| GlaI | GCGC | 2 cut(s) | 154, 457 |
| GsaI | CCCAGC | 1 cut(s) | 232 |
| HaeIII | GGCC | 1 cut(s) | 287 |
| HapII | CCGG | 1 cut(s) | 214 |
| HgaI | GACGC | 1 cut(s) | 447 |
| HhaI | GCGC | 2 cut(s) | 155, 458 |
| Hin1II | CATG | 3 cut(s) | 153, 449, 512 |
| Hin6I | GCGC | 2 cut(s) | 153, 456 |
| HinP1I | GCGC | 2 cut(s) | 153, 456 |
| HinfI | GANTC | 2 cut(s) | 56, 512 |
| HpaII | CCGG | 1 cut(s) | 214 |
| HphI | GGTGA | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 1 cut(s) | 262 |
| HpyAV | CCTTC | 2 cut(s) | 8, 479 |
| HpyCH4V | TGCA | 2 cut(s) | 41, 525 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 4 cut(s) | 178, 261, 297, 481 |
| Hsp92II | CATG | 3 cut(s) | 153, 449, 512 |
| HspAI | GCGC | 2 cut(s) | 153, 456 |
| LmnI | GCTCC | 1 cut(s) | 225 |
| LpnPI | CCDG | 5 cut(s) | 190, 214, 227, 301, 501 |
| LweI | GCATC | 1 cut(s) | 534 |
| MaeI | CTAG | 1 cut(s) | 109 |
| MaeIII | GTNAC | 1 cut(s) | 441 |
| MboII | GAAGA | 3 cut(s) | 65, 86, 194 |
| MfeI | CAATTG | 1 cut(s) | 42 |
| MluCI | AATT | 2 cut(s) | 42, 365 |
| MmeI | TCCRAC | 1 cut(s) | 250 |
| MnlI | CCTC | 5 cut(s) | 19, 256, 277, 385, 422 |
| Mph1103I | ATGCAT | 1 cut(s) | 527 |
| MspI | CCGG | 1 cut(s) | 214 |
| MspR9I | CCNGG | 1 cut(s) | 215 |
| MunI | CAATTG | 1 cut(s) | 42 |
| MvnI | CGCG | 2 cut(s) | 155, 458 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NciI | CCSGG | 1 cut(s) | 215 |
| NlaIII | CATG | 3 cut(s) | 153, 449, 512 |
| NsiI | ATGCAT | 1 cut(s) | 527 |
| NspI | RCATGY | 1 cut(s) | 153 |
| PceI | AGGCCT | 1 cut(s) | 287 |
| PfeI | GAWTC | 2 cut(s) | 56, 512 |
| PspFI | CCCAGC | 1 cut(s) | 228 |
| ScrFI | CCNGG | 1 cut(s) | 215 |
| SetI | ASST | 6 cut(s) | 163, 230, 248, 267, 414, 482 |
| SfaNI | GCATC | 1 cut(s) | 534 |
| SpeI | ACTAGT | 1 cut(s) | 108 |
| Sse9I | AATT | 2 cut(s) | 42, 365 |
| SseBI | AGGCCT | 1 cut(s) | 287 |
| SspMI | CTAG | 1 cut(s) | 109 |
| StuI | AGGCCT | 1 cut(s) | 287 |
| StyD4I | CCNGG | 1 cut(s) | 213 |
| TaqI | TCGA | 2 cut(s) | 166, 528 |
| TasI | AATT | 2 cut(s) | 42, 365 |
| TfiI | GAWTC | 2 cut(s) | 56, 512 |
| TscAI | CASTG | 1 cut(s) | 353 |
| TspDTI | ATGAA | 1 cut(s) | 48 |
| TspGWI | ACGGA | 1 cut(s) | 390 |
| TspRI | CASTG | 1 cut(s) | 353 |
| XceI | RCATGY | 1 cut(s) | 153 |
| XspI | CTAG | 1 cut(s) | 109 |
| Zsp2I | ATGCAT | 1 cut(s) | 527 |