pycom04g09770

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
12501482 .. 12502380
899 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g09770.2

Sequence Viewer

Length: 285 bp
ATGGAGAAGCTCAAGAACTCTACAATCTTCACCACCTGCCTTTTTCTCTTCCTCCTTGCCAAACCTTGCTTTTCTAAAGTAGGTGGATCGGATTTGATGGATGCTGAGGTTTATGAGATTGATTATAGAGGTCCGGAAACACACTCATCAGTTCCACCGCCTCATCATTATCATGGGAAGAAGCCTAAGCTTTTGATTCACAAAGAAAACGCCATGGCAACCCCAAAACCTGAGAGCATTAAAGGTGCAAAGATGGGAAGAAAGGTGAAGAAAGTGCATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

95

Amino Acids

10.59

Weight (kDa)

9.42

Isoelectric Point (pI)

24.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 44
Acc36I ACCTGC 1 cut(s) 44
AccIII TCCGGA 1 cut(s) 133
AciI CCGC 1 cut(s) 158
AclWI GGATC 1 cut(s) 94
AluBI AGCT 2 cut(s) 10, 190
AluI AGCT 2 cut(s) 10, 190
AlwI GGATC 1 cut(s) 94
Aor13HI TCCGGA 1 cut(s) 133
AspS9I GGNCC 1 cut(s) 131
AsuHPI GGTGA 2 cut(s) 22, 277
AvaII GGWCC 1 cut(s) 131
BbvCI CCTCAGC 1 cut(s) 105
BccI CCATC 2 cut(s) 91, 247
BfuAI ACCTGC 1 cut(s) 44
Bme18I GGWCC 1 cut(s) 131
BmgT120I GGNCC 1 cut(s) 131
BmsI GCATC 1 cut(s) 91
Bpu10I CCTNAGC 2 cut(s) 105, 186
BsaJI CCNNGG 1 cut(s) 213
BsaWI WCCGGW 1 cut(s) 133
BseAI TCCGGA 1 cut(s) 133
BseDI CCNNGG 1 cut(s) 213
BseGI GGATG 1 cut(s) 106
BseMII CTCAG 2 cut(s) 96, 222
BsiSI CCGG 1 cut(s) 134
Bsp13I TCCGGA 1 cut(s) 133
Bsp143I GATC 1 cut(s) 86
Bsp19I CCATGG 1 cut(s) 213
BspACI CCGC 1 cut(s) 158
BspCNI CTCAG 2 cut(s) 97, 223
BspEI TCCGGA 1 cut(s) 133
BspMI ACCTGC 1 cut(s) 44
BspPI GGATC 1 cut(s) 94
BssECI CCNNGG 1 cut(s) 213
BssMI GATC 1 cut(s) 86
BssT1I CCWWGG 1 cut(s) 213
Bst6I CTCTTC 1 cut(s) 53
BstDEI CTNAG 3 cut(s) 105, 186, 231
BstDSI CCRYGG 1 cut(s) 213
BstF5I GGATG 1 cut(s) 106
BstKTI GATC 1 cut(s) 89
BstMBI GATC 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 213
BtsCI GGATG 1 cut(s) 106
BveI ACCTGC 1 cut(s) 44
Cfr13I GGNCC 1 cut(s) 131
CviAII CATG 3 cut(s) 173, 214, 278
CviJI RGCY 3 cut(s) 10, 184, 190
CviKI_1 RGCY 3 cut(s) 10, 184, 190
DdeI CTNAG 3 cut(s) 105, 186, 231
DpnI GATC 1 cut(s) 88
DpnII GATC 1 cut(s) 86
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 213
Eco47I GGWCC 1 cut(s) 131
EcoT14I CCWWGG 1 cut(s) 213
ErhI CCWWGG 1 cut(s) 213
FaeI CATG 3 cut(s) 176, 217, 281
FaiI YATR 5 cut(s) 114, 126, 174, 215, 279
FatI CATG 3 cut(s) 172, 213, 277
FokI GGATG 1 cut(s) 113
HapII CCGG 1 cut(s) 134
Hin1II CATG 3 cut(s) 176, 217, 281
HindIII AAGCTT 1 cut(s) 188
HinfI GANTC 1 cut(s) 196
HpaII CCGG 1 cut(s) 134
HphI GGTGA 2 cut(s) 22, 277
Hpy188I TCNGA 1 cut(s) 91
Hpy188III TCNNGA 2 cut(s) 13, 134
HpyCH4V TGCA 2 cut(s) 248, 277
HpyF3I CTNAG 3 cut(s) 105, 186, 231
Hsp92II CATG 3 cut(s) 176, 217, 281
Kpn2I TCCGGA 1 cut(s) 133
Kzo9I GATC 1 cut(s) 86
LpnPI CCDG 3 cut(s) 49, 147, 243
LweI GCATC 1 cut(s) 91
MalI GATC 1 cut(s) 88
MboI GATC 1 cut(s) 86
MboII GAAGA 5 cut(s) 19, 40, 190, 270, 280
MnlI CCTC 4 cut(s) 62, 100, 122, 171
MroI TCCGGA 1 cut(s) 133
MseI TTAA 1 cut(s) 240
MslI CAYNNNNRTG 1 cut(s) 171
MspI CCGG 1 cut(s) 134
NcoI CCATGG 1 cut(s) 213
NdeII GATC 1 cut(s) 86
NlaIII CATG 3 cut(s) 176, 217, 281
PaqCI CACCTGC 1 cut(s) 44
PfeI GAWTC 1 cut(s) 196
PspPI GGNCC 1 cut(s) 131
RseI CAYNNNNRTG 1 cut(s) 171
SaqAI TTAA 1 cut(s) 240
Sau3AI GATC 1 cut(s) 86
Sau96I GGNCC 1 cut(s) 131
SfaNI GCATC 1 cut(s) 91
SgeI CNNG 8 cut(s) 25, 48, 68, 78, 146, 185, 226, 242
SinI GGWCC 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 171
SmlI CTYRAG 1 cut(s) 11
SmoI CTYRAG 1 cut(s) 11
SsiI CCGC 1 cut(s) 158
StyI CCWWGG 1 cut(s) 213
TfiI GAWTC 1 cut(s) 196
Tru1I TTAA 1 cut(s) 240
Tru9I TTAA 1 cut(s) 240
VpaK11BI GGWCC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.