Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0004399

Physical Location & Seq

Genomic Coordinates Forward (+)

21537527 .. 21539298

Gene Structure 1772 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g19940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1731 bp

ATGTACATCAAAACACCAATTCTTCTATTTCTCGCCTTTGCATCCGTGTTCTTGAACGGCCTCAATGCTGCAAACCCGGGCTCAGATTCGCTGATCCTTGGCTGTGGCGCTGATAATGAGGCCAAAGATGCAGATGGGAGGAAATGGCAACCGGACAAGAAGTACATTGCCGATTCATCAAAGACAACCTCGGCACAAGCGCAGTTCCAGGACCCTGCTCTTCTTTCCGAGGTTCCATACATGAAAGCCAGGATTTTCACCGCGAATACCACGTACAAGTTGCCTGTGCAACCCAAGCAGCGCTACATGCTTAGACTTTATTTCTATCCAGCTGTGTATGGCAGCAACAACGCTGAGGGGTCCTATTTTTCGGTTGTCGCCAATGGCATCACTCTCTTGCAAAACTTTAGCGCTTCAATCACTTGCAGGGCCCTTACACAAGCTTATATCATGAGGGAGTATATGTTGGCATCCCTCAACAAGGATTCCCTAGAGGTCACCTTTTCGCCTTCCTCGGGGTTTGCATTTGTGAATGGAATTGAGCTGATTGGAGCCCCTGACATGTTTGGCGATGCTGCAATAGTCGGGTCTTCAGACCAGACTTTTGACGGCAAGAGTTCAAATTTGCAGACCATGTTTAGAGTGAATATTGGGGGGCAGTTTATTTCCCCAACCAATGACTCCGGCACGCTAACAAGGACATGGTACGATGACTTTGCTTATGTATATGGTGCACAACTTGGGGTCACCAACGAGGCCGCCAAGAACGTAAAAATTGACTACAAAGATATGCCACCGTACATTGCTCCCGTTGATATCTACAGGACCTCGAGATCAATGGGTGAGAAGAAGGACATCAACCTCGGTTATAATCTCACGTGGGTGTTCAACCAAGTCGATGCTAAATTCATGTACCTTGTGAGGTTACACTTTTGTGACTTTTACCTCACAAAAGCCAATCAAGTAGTGTTCACAATCTACATTAACAATCAAACCGCCGAGGCTGAAGCAGATGTGATCGGATGGACAGGGGGAAGGGGGGTGACTACATACAGAGATTATGTAGTAGTGGCCAATGAGGGTTTTAATGGTGACCTCTGGCTAGCTTTGCACCCTTCGAAGAAATCAAGTCCTCAGTTCTACGATTCACTCCTCAATGGGGTGGAGATATTCAAGCTCGAAGAGGGTAAAAACTTGGCAGGCCCTAATCCCAAGATTTCTGACATGTTGGCGAAGGACGAGCAAGAGAAGAGAAGCTTTCAAAGTCAGCAGCAGCAGCAGGAAGGAAGCGGTACCAACAAAGCTCACGTGATTGGCGGAGCCGCTGGAGGAGCTGCAGCCTTTGGCATTGTTGCTGCATTGTGCATTGCTGTGTACCAACGAAAGAAAAGGGCCCCGGGAAGTGATACACACACTACTAGCTGGCTACCAATCTACGGAAATTCCCATACCAGTGGCACCAAATCAACAATCTCAGGCAAGAGCAATGCTAGCACCCACTTGTCGTCAGCTGCTCAAGGCCGTTGTAGGCGTTTCACCTTCCCTGAGATGAAACATGCTACTAAGAATTTCGACGAGTCTAATGTCATTGGTGTTGGAGGATTCGGAAAGGTGTACAAGGGTGTCATCGATGGAGAAACAAAAGTGGCGATCGAGAGATCTAACCCACAATCAGAGCAAGGAGTTAACGAATTCCAGACCGAAATTGAGATGCTTTCAGAGCTGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0016324 GO:0030427 GO:0035838 GO:0042995 GO:0044425 GO:0044459 GO:0044463 GO:0044464 GO:0045177 GO:0051286 GO:0071944 GO:0090404 GO:0090406 GO:0098590 GO:0120025 GO:0120038

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

577

Amino Acids

63.26

Weight (kDa)

7.05

Isoelectric Point (pI)

36.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	34 - 392	6.1e-30	Malectin-like domain
Malectin	PF11721	34 - 169	2.4e-08	Malectin domain
Malectin	PF11721	213 - 355	1.1e-08	Malectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04690 AT5G28680 AT5G28680
fragaria_vesca	FvH4_4g19690 FvH4_6g02670
malus_domestica	MD04G1226200.v1.1 MD12G1243300.v1.1 MD13G1154700.v1.1
prunus_persica	Prupe.1G117700_v2.0.a1 Prupe.6G345000_v2.0.a1
pyrus_communis	pycom04g19940 pycom13g13150
rosa_chinensis	RchiOBHm_Chr3g0450621 RchiOBHm_Chr4g0425141
rosa_laevigata	RLG00000007395 RLG00000025717
rosa_multiflora	Rmu_sc0000078.1_g000041 Rmu_ssc0000420.1_g000041
rosa_roxburghii	Rroxscaffold_5G00367230 Rroxscaffold_6G00428300
rosa_rugosa	Rorug02G0629100 Rorug04G0201800
rosa_samantha	Rh3AG029800 Rh3BG030200 Rh3CG029100 Rh3DG029900 Rh4AG258400 Rh4BG264200 Rh4CG275300 Rh4DG260300
rosa_wichuraiana	Rw3G002300 Rw4G022370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	870
Acc65I	GGTACC	1 cut(s)	1292
AccB1I	GGYRCC	2 cut(s)	1292, 1457
AccII	CGCG	1 cut(s)	263
AciI	CCGC	6 cut(s)	261, 759, 996, 1290, 1317, 1323
AclWI	GGATC	1 cut(s)	88
AcoI	YGGCCR	1 cut(s)	1071
AcsI	RAATTY	5 cut(s)	622, 905, 1441, 1567, 1691
AcuI	CTGAAG	2 cut(s)	576, 1026
AcvI	CACGTG	2 cut(s)	879, 1309
AfaI	GTAC	9 cut(s)	5, 164, 275, 707, 800, 914, 1294, 1376, 1616
AfeI	AGCGCT	2 cut(s)	302, 412
AfiI	CCNNNNNNNGG	4 cut(s)	481, 515, 1159, 1436
AflIII	ACRYGT	2 cut(s)	561, 1224
AgsI	TTSAA	6 cut(s)	55, 417, 621, 889, 1174, 1262
AjnI	CCWGG	2 cut(s)	207, 248
AleI	CACNNNNGTG	2 cut(s)	881, 933
Alw21I	GWGCWC	1 cut(s)	736
Alw44I	GTGCAC	1 cut(s)	732
AlwI	GGATC	1 cut(s)	88
Ama87I	CYCGRG	4 cut(s)	76, 514, 829, 1396
Aor51HI	AGCGCT	2 cut(s)	302, 412
AoxI	GGCC	8 cut(s)	58, 120, 429, 756, 1071, 1201, 1392, 1519
ApaI	GGGCCC	2 cut(s)	433, 1396
ApaLI	GTGCAC	1 cut(s)	732
ApoI	RAATTY	5 cut(s)	622, 905, 1441, 1567, 1691
ArsI	GACNNNNNNTTYG	2 cut(s)	587, 619
Asp718I	GGTACC	1 cut(s)	1292
AspLEI	GCGC	4 cut(s)	110, 202, 303, 413
AspS9I	GGNCC	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
AsuC2I	CCSGG	4 cut(s)	77, 78, 1397, 1398
AsuHPI	GGTGA	7 cut(s)	250, 490, 739, 854, 1054, 1103, 1528
AsuII	TTCGAA	1 cut(s)	1118
AsuNHI	GCTAGC	2 cut(s)	1102, 1490
AvaI	CYCGRG	4 cut(s)	76, 514, 829, 1396
AvaII	GGWCC	3 cut(s)	211, 360, 825
BaeGI	GKGCMC	3 cut(s)	433, 736, 1396
BalI	TGGCCA	1 cut(s)	1073
BanI	GGYRCC	2 cut(s)	1292, 1457
BanII	GRGCYC	4 cut(s)	83, 433, 556, 1396
BbrPI	CACGTG	2 cut(s)	879, 1309
BbsI	GAAGAC	1 cut(s)	582
Bbv12I	GWGCWC	1 cut(s)	736
BbvCI	CCTCAGC	1 cut(s)	354
BccI	CCATC	3 cut(s)	128, 1017, 1625
BceAI	ACGGC	3 cut(s)	73, 625, 1506
BcgI	CGANNNNNNTGC	2 cut(s)	698, 732
BciT130I	CCWGG	2 cut(s)	209, 250
BcnI	CCSGG	4 cut(s)	77, 78, 1397, 1398
BfaI	CTAG	4 cut(s)	491, 1103, 1419, 1491
BfmI	CTRYAG	2 cut(s)	820, 1335
BfoI	RGCGCY	3 cut(s)	111, 304, 414
BglII	AGATCT	1 cut(s)	1658
Bme1390I	CCNGG	6 cut(s)	77, 78, 209, 250, 1397, 1398
Bme18I	GGWCC	3 cut(s)	211, 360, 825
BmeT110I	CYCGRG	4 cut(s)	76, 514, 829, 1396
BmgT120I	GGNCC	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
BmrFI	CCNGG	6 cut(s)	77, 78, 209, 250, 1397, 1398
BmsI	GCATC	7 cut(s)	50, 118, 396, 479, 562, 889, 1701
BmtI	GCTAGC	2 cut(s)	1106, 1494
BpiI	GAAGAC	1 cut(s)	582
BpmI	CTGGAG	1 cut(s)	1347
Bpu10I	CCTNAGC	1 cut(s)	354
Bpu14I	TTCGAA	1 cut(s)	1118
BpuEI	CTTGAG	1 cut(s)	1500
BpuMI	CCSGG	4 cut(s)	77, 78, 1397, 1398
Bsa29I	ATCGAT	1 cut(s)	1629
BsaAI	YACGTR	3 cut(s)	273, 879, 1309
BsaJI	CCNNGG	9 cut(s)	76, 97, 189, 228, 513, 862, 999, 1395, 1396
BsaWI	WCCGGW	1 cut(s)	151
BsaXI	ACNNNNNCTCC	2 cut(s)	449, 479
Bsc4I	CCNNNNNNNGG	4 cut(s)	481, 515, 1159, 1436
Bse1I	ACTGG	1 cut(s)	1452
Bse3DI	GCAATG	4 cut(s)	165, 801, 1365, 1492
BseBI	CCWGG	2 cut(s)	209, 250
BseCI	ATCGAT	1 cut(s)	1629
BseDI	CCNNGG	9 cut(s)	76, 97, 189, 228, 513, 862, 999, 1395, 1396
BseGI	GGATG	3 cut(s)	41, 470, 1028
BseLI	CCNNNNNNNGG	4 cut(s)	481, 515, 1159, 1436
BseMI	GCAATG	4 cut(s)	165, 801, 1365, 1492
BseMII	CTCAG	6 cut(s)	96, 345, 1148, 1488, 1536, 1715
BseNI	ACTGG	1 cut(s)	1452
BseRI	GAGGAG	2 cut(s)	1142, 1344
BseSI	GKGCMC	3 cut(s)	433, 736, 1396
Bsh1236I	CGCG	1 cut(s)	263
Bsh1285I	CGRYCG	1 cut(s)	1653
BshFI	GGCC	8 cut(s)	60, 122, 431, 758, 1073, 1203, 1394, 1521
BshNI	GGYRCC	2 cut(s)	1292, 1457
BshVI	ATCGAT	1 cut(s)	1629
BsiEI	CGRYCG	1 cut(s)	1653
BsiHKAI	GWGCWC	1 cut(s)	736
BsiHKCI	CYCGRG	4 cut(s)	76, 514, 829, 1396
BsiSI	CCGG	4 cut(s)	77, 152, 684, 1397
BslI	CCNNNNNNNGG	4 cut(s)	481, 515, 1159, 1436
BsnI	GGCC	8 cut(s)	60, 122, 431, 758, 1073, 1203, 1394, 1521
BsoBI	CYCGRG	4 cut(s)	76, 514, 829, 1396
Bsp119I	TTCGAA	1 cut(s)	1118
Bsp120I	GGGCCC	2 cut(s)	429, 1392
Bsp1286I	GDGCHC	5 cut(s)	83, 433, 556, 736, 1396
Bsp1407I	TGTACA	2 cut(s)	3, 1614
Bsp143I	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
BspACI	CCGC	6 cut(s)	261, 759, 996, 1290, 1317, 1323
BspANI	GGCC	8 cut(s)	60, 122, 431, 758, 1073, 1203, 1394, 1521
BspCNI	CTCAG	6 cut(s)	95, 346, 1147, 1487, 1537, 1716
BspDI	ATCGAT	1 cut(s)	1629
BspFNI	CGCG	1 cut(s)	263
BspHI	TCATGA	1 cut(s)	450
BspMAI	CTGCAG	1 cut(s)	1339
BspOI	GCTAGC	2 cut(s)	1106, 1494
BspPI	GGATC	1 cut(s)	88
BspQI	GCTCTTC	1 cut(s)	225
BspT104I	TTCGAA	1 cut(s)	1118
BspT107I	GGYRCC	2 cut(s)	1292, 1457
BsrDI	GCAATG	4 cut(s)	165, 801, 1365, 1492
BsrGI	TGTACA	2 cut(s)	3, 1614
BsrI	ACTGG	1 cut(s)	1452
BssECI	CCNNGG	9 cut(s)	76, 97, 189, 228, 513, 862, 999, 1395, 1396
BssMI	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
BssT1I	CCWWGG	1 cut(s)	97
Bst2UI	CCWGG	2 cut(s)	209, 250
Bst4CI	ACNGT	1 cut(s)	798
Bst6I	CTCTTC	3 cut(s)	225, 1176, 1244
BstAUI	TGTACA	2 cut(s)	3, 1614
BstBAI	YACGTR	3 cut(s)	273, 879, 1309
BstBI	TTCGAA	1 cut(s)	1118
BstC8I	GCNNGC	5 cut(s)	689, 1104, 1201, 1424, 1492
BstDEI	CTNAG	8 cut(s)	82, 311, 354, 1134, 1474, 1545, 1563, 1724
BstEII	GGTNACC	3 cut(s)	496, 745, 1091
BstENI	CCTNNNNNAGG	1 cut(s)	479
BstF5I	GGATG	3 cut(s)	41, 470, 1028
BstFNI	CGCG	1 cut(s)	263
BstH2I	RGCGCY	3 cut(s)	111, 304, 414
BstHHI	GCGC	4 cut(s)	110, 202, 303, 413
BstKTI	GATC	5 cut(s)	96, 836, 1020, 1653, 1661
BstMBI	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
BstMCI	CGRYCG	1 cut(s)	1653
BstMWI	GCNNNNNNNGC	8 cut(s)	128, 295, 307, 1108, 1276, 1331, 1491, 1720
BstNI	CCWGG	2 cut(s)	209, 250
BstNSI	RCATGY	4 cut(s)	310, 565, 1228, 1559
BstPI	GGTNACC	3 cut(s)	496, 745, 1091
BstSCI	CCNGG	6 cut(s)	75, 76, 207, 248, 1395, 1396
BstSFI	CTRYAG	2 cut(s)	820, 1335
BstSLI	GKGCMC	3 cut(s)	433, 736, 1396
BstUI	CGCG	1 cut(s)	263
BstV2I	GAAGAC	1 cut(s)	582
BstX2I	RGATCY	1 cut(s)	1658
BstXI	CCANNNNNNTGG	1 cut(s)	1454
BstYI	RGATCY	1 cut(s)	1658
Bsu15I	ATCGAT	1 cut(s)	1629
BsuRI	GGCC	8 cut(s)	60, 122, 431, 758, 1073, 1203, 1394, 1521
BsuTUI	ATCGAT	1 cut(s)	1629
BtgZI	GCGATG	1 cut(s)	585
BtsCI	GGATG	3 cut(s)	41, 470, 1028
BtsIMutI	CAGTG	1 cut(s)	1459
Cac8I	GCNNGC	5 cut(s)	689, 1104, 1201, 1424, 1492
CciI	TCATGA	1 cut(s)	450
CfoI	GCGC	4 cut(s)	110, 202, 303, 413
Cfr13I	GGNCC	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
Cfr9I	CCCGGG	2 cut(s)	76, 1396
ClaI	ATCGAT	1 cut(s)	1629
Csp6I	GTAC	9 cut(s)	4, 163, 274, 706, 799, 913, 1293, 1375, 1615
CviAII	CATG	9 cut(s)	241, 307, 451, 562, 634, 702, 910, 1225, 1556
CviQI	GTAC	9 cut(s)	4, 163, 274, 706, 799, 913, 1293, 1375, 1615
DdeI	CTNAG	8 cut(s)	82, 311, 354, 1134, 1474, 1545, 1563, 1724
DpnI	GATC	5 cut(s)	95, 835, 1019, 1652, 1660
DpnII	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
EaeI	YGGCCR	1 cut(s)	1071
Eam1104I	CTCTTC	3 cut(s)	225, 1176, 1244
EarI	CTCTTC	3 cut(s)	225, 1176, 1244
EciI	GGCGGA	1 cut(s)	1332
Eco130I	CCWWGG	1 cut(s)	97
Eco24I	GRGCYC	4 cut(s)	83, 433, 556, 1396
Eco32I	GATATC	1 cut(s)	817
Eco47I	GGWCC	3 cut(s)	211, 360, 825
Eco47III	AGCGCT	2 cut(s)	302, 412
Eco57I	CTGAAG	2 cut(s)	576, 1026
Eco72I	CACGTG	2 cut(s)	879, 1309
Eco88I	CYCGRG	4 cut(s)	76, 514, 829, 1396
Eco91I	GGTNACC	3 cut(s)	496, 745, 1091
EcoNI	CCTNNNNNAGG	1 cut(s)	479
EcoO109I	RGGNCCY	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
EcoO65I	GGTNACC	3 cut(s)	496, 745, 1091
EcoRI	GAATTC	1 cut(s)	1691
EcoRII	CCWGG	2 cut(s)	207, 248
EcoRV	GATATC	1 cut(s)	817
EcoT14I	CCWWGG	1 cut(s)	97
EcoT38I	GRGCYC	4 cut(s)	83, 433, 556, 1396
ErhI	CCWWGG	1 cut(s)	97
FaeI	CATG	9 cut(s)	244, 310, 454, 565, 637, 705, 913, 1228, 1559
FalI	AAGNNNNNCTT	2 cut(s)	1241, 1273
FatI	CATG	9 cut(s)	240, 306, 450, 561, 633, 701, 909, 1224, 1555
FokI	GGATG	3 cut(s)	28, 457, 1035
FriOI	GRGCYC	4 cut(s)	83, 433, 556, 1396
FspBI	CTAG	4 cut(s)	491, 1103, 1419, 1491
GlaI	GCGC	4 cut(s)	109, 201, 302, 412
GsuI	CTGGAG	1 cut(s)	1347
HaeII	RGCGCY	3 cut(s)	111, 304, 414
HaeIII	GGCC	8 cut(s)	60, 122, 431, 758, 1073, 1203, 1394, 1521
HapII	CCGG	4 cut(s)	77, 152, 684, 1397
HhaI	GCGC	4 cut(s)	110, 202, 303, 413
Hin1II	CATG	9 cut(s)	244, 310, 454, 565, 637, 705, 913, 1228, 1559
Hin6I	GCGC	4 cut(s)	108, 200, 301, 411
HinP1I	GCGC	4 cut(s)	108, 200, 301, 411
HincII	GTYRAC	1 cut(s)	1687
HindII	GTYRAC	1 cut(s)	1687
HindIII	AAGCTT	2 cut(s)	441, 1255
HinfI	GANTC	7 cut(s)	86, 173, 485, 680, 1145, 1577, 1602
HpaI	GTTAAC	1 cut(s)	1687
HpaII	CCGG	4 cut(s)	77, 152, 684, 1397
HphI	GGTGA	7 cut(s)	250, 490, 739, 854, 1054, 1103, 1528
Hpy166II	GTNNAC	5 cut(s)	734, 972, 1375, 1615, 1687
Hpy188I	TCNGA	8 cut(s)	85, 229, 595, 1022, 1222, 1607, 1675, 1720
Hpy188III	TCNNGA	5 cut(s)	52, 451, 831, 1654, 1696
Hpy8I	GTNNAC	5 cut(s)	734, 972, 1375, 1615, 1687
Hpy99I	CGWCG	1 cut(s)	1577
HpyAV	CCTTC	7 cut(s)	519, 844, 1029, 1125, 1228, 1277, 1549
HpyCH4III	ACNGT	1 cut(s)	798
HpyCH4IV	ACGT	4 cut(s)	272, 768, 878, 1308
HpyF10VI	GCNNNNNNNGC	8 cut(s)	128, 295, 307, 1108, 1276, 1331, 1491, 1720
HpyF3I	CTNAG	8 cut(s)	82, 311, 354, 1134, 1474, 1545, 1563, 1724
HpySE526I	ACGT	4 cut(s)	272, 768, 878, 1308
Hsp92II	CATG	9 cut(s)	244, 310, 454, 565, 637, 705, 913, 1228, 1559
HspAI	GCGC	4 cut(s)	108, 200, 301, 411
KpnI	GGTACC	1 cut(s)	1296
KspAI	GTTAAC	1 cut(s)	1687
Kzo9I	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
LguI	GCTCTTC	1 cut(s)	225
LmnI	GCTCC	4 cut(s)	551, 811, 1319, 1331
LweI	GCATC	7 cut(s)	50, 118, 396, 479, 562, 889, 1701
MaeI	CTAG	4 cut(s)	491, 1103, 1419, 1491
MaeII	ACGT	4 cut(s)	272, 768, 878, 1308
MaeIII	GTNAC	6 cut(s)	496, 745, 924, 935, 1042, 1091
MalI	GATC	5 cut(s)	95, 835, 1019, 1652, 1660
MboI	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
MboII	GAAGA	7 cut(s)	14, 212, 582, 859, 1132, 1193, 1261
MflI	RGATCY	1 cut(s)	1658
MhlI	GDGCHC	5 cut(s)	83, 433, 556, 736, 1396
MlsI	TGGCCA	1 cut(s)	1073
MluCI	AATT	9 cut(s)	18, 537, 622, 774, 905, 1441, 1567, 1691, 1704
MluNI	TGGCCA	1 cut(s)	1073
MlyI	GAGTC	2 cut(s)	674, 1586
MmeI	TCCRAC	1 cut(s)	1576
Mox20I	TGGCCA	1 cut(s)	1073
MscI	TGGCCA	1 cut(s)	1073
MseI	TTAA	3 cut(s)	984, 1086, 1686
MslI	CAYNNNNRTG	4 cut(s)	881, 933, 1370, 1452
Msp20I	TGGCCA	1 cut(s)	1073
MspA1I	CMGCKG	3 cut(s)	332, 1325, 1511
MspI	CCGG	4 cut(s)	77, 152, 684, 1397
MspR9I	CCNGG	6 cut(s)	77, 78, 209, 250, 1397, 1398
MvaI	CCWGG	2 cut(s)	209, 250
MvnI	CGCG	1 cut(s)	263
MwoI	GCNNNNNNNGC	8 cut(s)	128, 295, 307, 1108, 1276, 1331, 1491, 1720
NciI	CCSGG	4 cut(s)	77, 78, 1397, 1398
NdeII	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
NheI	GCTAGC	2 cut(s)	1102, 1490
NlaIII	CATG	9 cut(s)	244, 310, 454, 565, 637, 705, 913, 1228, 1559
NmeAIII	GCCGAG	2 cut(s)	170, 1024
NmuCI	GTSAC	5 cut(s)	496, 745, 935, 1042, 1091
NspI	RCATGY	4 cut(s)	310, 565, 1228, 1559
NspV	TTCGAA	1 cut(s)	1118
OliI	CACNNNNGTG	2 cut(s)	881, 933
PaeR7I	CTCGAG	1 cut(s)	829
PagI	TCATGA	1 cut(s)	450
PciI	ACATGT	2 cut(s)	561, 1224
PciSI	GCTCTTC	1 cut(s)	225
PfeI	GAWTC	5 cut(s)	86, 173, 485, 1145, 1602
PfoI	TCCNGGA	1 cut(s)	207
Ple19I	CGATCG	1 cut(s)	1653
PleI	GAGTC	2 cut(s)	674, 1585
PmaCI	CACGTG	2 cut(s)	879, 1309
PmlI	CACGTG	2 cut(s)	879, 1309
PpsI	GAGTC	2 cut(s)	674, 1585
Ppu21I	YACGTR	3 cut(s)	273, 879, 1309
PpuMI	RGGWCCY	3 cut(s)	211, 360, 825
PscI	ACATGT	2 cut(s)	561, 1224
PsiI	TTATAA	1 cut(s)	870
Psp5II	RGGWCCY	3 cut(s)	211, 360, 825
Psp6I	CCWGG	2 cut(s)	207, 248
PspCI	CACGTG	2 cut(s)	879, 1309
PspEI	GGTNACC	3 cut(s)	496, 745, 1091
PspGI	CCWGG	2 cut(s)	207, 248
PspOMI	GGGCCC	2 cut(s)	429, 1392
PspPI	GGNCC	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
PspPPI	RGGWCCY	3 cut(s)	211, 360, 825
PstI	CTGCAG	1 cut(s)	1339
PsuI	RGATCY	1 cut(s)	1658
PvuI	CGATCG	1 cut(s)	1653
PvuII	CAGCTG	2 cut(s)	332, 1511
RsaI	GTAC	9 cut(s)	5, 164, 275, 707, 800, 914, 1294, 1376, 1616
RsaNI	GTAC	9 cut(s)	4, 163, 274, 706, 799, 913, 1293, 1375, 1615
RseI	CAYNNNNRTG	4 cut(s)	881, 933, 1370, 1452
SapI	GCTCTTC	1 cut(s)	225
SaqAI	TTAA	3 cut(s)	984, 1086, 1686
Sau3AI	GATC	5 cut(s)	93, 833, 1017, 1650, 1658
Sau96I	GGNCC	8 cut(s)	211, 360, 429, 430, 825, 1202, 1392, 1393
SchI	GAGTC	2 cut(s)	674, 1586
ScrFI	CCNGG	6 cut(s)	77, 78, 209, 250, 1397, 1398
SduI	GDGCHC	5 cut(s)	83, 433, 556, 736, 1396
SfaNI	GCATC	7 cut(s)	50, 118, 396, 479, 562, 889, 1701
SfcI	CTRYAG	2 cut(s)	820, 1335
Sfr274I	CTCGAG	1 cut(s)	829
SfuI	TTCGAA	1 cut(s)	1118
SinI	GGWCC	3 cut(s)	211, 360, 825
SlaI	CTCGAG	1 cut(s)	829
SmaI	CCCGGG	2 cut(s)	78, 1398
SmiMI	CAYNNNNRTG	4 cut(s)	881, 933, 1370, 1452
SmlI	CTYRAG	2 cut(s)	829, 1515
SmoI	CTYRAG	2 cut(s)	829, 1515
Sse9I	AATT	9 cut(s)	18, 537, 622, 774, 905, 1441, 1567, 1691, 1704
SsiI	CCGC	6 cut(s)	261, 759, 996, 1290, 1317, 1323
SspI	AATATT	1 cut(s)	649
SspMI	CTAG	4 cut(s)	491, 1103, 1419, 1491
StyD4I	CCNGG	6 cut(s)	75, 76, 207, 248, 1395, 1396
StyI	CCWWGG	1 cut(s)	97
TaaI	ACNGT	1 cut(s)	798
TaiI	ACGT	4 cut(s)	275, 771, 881, 1311
TaqI	TCGA	7 cut(s)	830, 897, 1118, 1179, 1572, 1629, 1653
TaqII	GACCGA	1 cut(s)	1715
TasI	AATT	9 cut(s)	18, 537, 622, 774, 905, 1441, 1567, 1691, 1704
TatI	WGTACW	3 cut(s)	3, 162, 1614
TauI	GCSGC	2 cut(s)	761, 1325
TfiI	GAWTC	5 cut(s)	86, 173, 485, 1145, 1602
Tru1I	TTAA	3 cut(s)	984, 1086, 1686
Tru9I	TTAA	3 cut(s)	984, 1086, 1686
TscAI	CASTG	1 cut(s)	1459
TseFI	GTSAC	5 cut(s)	496, 745, 935, 1042, 1091
Tsp45I	GTSAC	5 cut(s)	496, 745, 935, 1042, 1091
TspDTI	ATGAA	4 cut(s)	165, 257, 898, 1565
TspGWI	ACGGA	2 cut(s)	34, 1452
TspMI	CCCGGG	2 cut(s)	76, 1396
TspRI	CASTG	1 cut(s)	1459
VneI	GTGCAC	1 cut(s)	732
VpaK11BI	GGWCC	3 cut(s)	211, 360, 825
XagI	CCTNNNNNAGG	1 cut(s)	479
XapI	RAATTY	5 cut(s)	622, 905, 1441, 1567, 1691
XceI	RCATGY	4 cut(s)	310, 565, 1228, 1559
XhoI	CTCGAG	1 cut(s)	829
XmaI	CCCGGG	2 cut(s)	76, 1396
XspI	CTAG	4 cut(s)	491, 1103, 1419, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.