Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0004399

Physical Location & Seq

Genomic Coordinates Reverse (-)

48738786 .. 48741417

Gene Structure 2632 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00428300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGTCCACCGGAACCAACATTGTTTTCTTTCTCGCTTTTGTGTCTGCCTTTCTAAGTTTTGGCCTGCAAGCGGCGAGCCCGGACTCGTTGATGCTCGGCTGTGGCTCAGAAAATGAAGCCACAGATGCAGACGGGCGAAAATGGTTACCAGACTCGAAGTTTGTTACTGCTTCGAATTCCGTTCAGGCCCAAGCTCAATACCAAGACCCTGCACTCAATTCCGAGATCCCATACATGAAGGCCAGGATCTTCACCTCAAATGCCACGTACAAGTTGCCGGCCAAATCTAAGCAAAGGTACTTCCTCAGGCTACATTTCTATCCTGCAAACTATGGCAGCCACAATGCCGAGCAGGCCTTTTTTTCGGTTATGGCAAATGGAGTCACATTGTTGAAGAATTTCAGCGTCTCAATCACTTGCAAGGCGACCACGCAAGCTTATATCATAAGAGAGTACTCCGTGGCTCCACTCACCAAGGATGATCTGGAACTCACATTTTCGGTCAACACAGGTTTTGCCTTTGTCAATGGCATTGAGTTTGTCCCCGCCCCAGATGACTTGTTCGACAAGGCTACGCTTGTTGGAAATCCGGATCAGTCCTTCGACAGCAAGAGCTCGAATTTGCAGACATTGTATAGGTTGAACGTCGGTGGGAGTTCCATTCCACCAACCAAGGACTCTGGCTCCTTAGGAAGGACTTGGTATGATGACAGTAGTTATCTATTTAGTGCTAATACTGGGGTCCCCAATCTGGCTGACAATAAGACGAAAATTGAGTACAAAGATATCCCAGACTATTCTGCTCCTGTTGATATTTACACCACCGCAAGATCAATGGGTCCTGATGGGAATGTAAATATAAATAACAACCTCACATGGATGTTCAACCAGGTTGATACCAAGTACATGTACATTGTGAGGCTACACTTTTGCGACAATAAAAACACCAAAGCGAATCAGATTGTATTCACCATTTACATTAACAACCAAACCGCGGAGCCTGTAGCCGATGTGATCGGATGGTCAGGAGGGATCGGAAAAGCTGTATACAGAGACTACGCGACAATACTTGATGAAAAGAGTGGTGGCGATCTTTGGCTAACTTTGCATCCTAATCAGGATACAAAACCACAGTACTATGATGCACTGCTCAACGGCGTGGAAATATTCAAGCTTGAAACTGGTAAAAGTTTGGCCGGTCCTAATCCCAAGCCTTCGGAAATGTTGGAAAAGAACGAGGAAGAGAAAAAGAAAAACTTTGAAAATCAAAAGGATAAGGAAACGGGTTCAAACAAAGCTCATGTGATTGGTGGAGCAGCAGGAGGAGCTGCAGCTGCTGGGATAGTGGCTGCATTGTGCATTGCTGTGTACCAAAGGAAGAAGCGAGTCCAAGGAACTGAATCACATACTAATAGCTGGCTTCCAATTTATGGCAACTCGCACACTAGTGGCACAAAATCCACAGGTTCGGGGAGGAGTAACGGTAGCAGACACCTATCGTCAGCTGCTCAAGGCCGGTGCAGGCGCTTCTCATTTGTTGAGATGAAACAGGCCACCAAGAATTTTGATGAGACTAATGTGATTGGTGTTGGAGGGTTTGGGAAGAGGTCTAACCCTCAATCCGAACAAGGAGTACACGAATTCCAGACCGAAATTGAGATGCTTTCGGAGTTGAGGCACAAGCATTTGGTTTCTCTCATTGGATTCTGTGAGGAAGACAATGAAATGTGCTTGGTTTATGACTACATGTCACGCGGCACACTTAGAGAGCACATTTACAAGGGCAACAAGACTCATTTGTCATGGAAGCAAAGGCTGGAGATTTGCATTGGAGCAGCTAAAGGACTTCACTACCTTCACACAGGGGCAAGATGGACAATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAGAATTGGGAGGCTAAGGTCTCTGATTTCGGGCTCTCGAAAACTGGCCCAGACTTGAACAAGGGTCACGTTAGCACAGTAGTGAAGGGTAGCTTTGGGTATTTGGATCCTGAATACTTCAAAAGACAACAACTGACTGAAAAATCTGATGTCTACTCCTTTGGGGTTGTCCTATTTGAGGTGTTGTGTGCAAGGCCTGCTCTAAATCCAAACCTTCCAAAAGAACAGGTTAGTCTAGCAGATTGGGCACTACATTGCCAAAAGAAAGGGATTCTAGAAGAAATCATTGACCCTCATTTGAAGGGCAAAGTGAACATGGAAAGCATCAATAAATTTGCAGACACAGCGGAGAAGTGCTTGTCTGAGTGCGGAGTTGATCGCCCGAGTTTGAATGACATCTTGTGGAACCTTGAGTTTGCTCTCCAGTTGCAGGAGGGGACAGATAGTGGGTCGACAGGATTGGCGACACGAACCCGATCCGACTCCGATGATGCTAGTTTGAGAAACCAGCACATGATGGCCATACATTACAGCAACCTCAGTCTTGGAAGTGAGAGTGAAATAGGGGAAGAACAACCACCACCATCATCCAATAACAACGAAGCCGCCCCCGATAATGATAGCGCAATCTTCTCGCAGATTGTCAATCCGACGGGTCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0016324 GO:0030427 GO:0035838 GO:0042995 GO:0044425 GO:0044459 GO:0044463 GO:0044464 GO:0045177 GO:0051286 GO:0071944 GO:0090404 GO:0090406 GO:0098590 GO:0120025 GO:0120038

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

860

Amino Acids

95.06

Weight (kDa)

6.0

Isoelectric Point (pI)

40.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin	PF11721	32 - 167	4.9e-09	Malectin domain
Malectin_like	PF12819	33 - 391	3.5e-33	Malectin-like domain
PK_Tyr_Ser-Thr	PF07714	540 - 723	3.6e-40	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	540 - 774	7.2e-38	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004399)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04690 AT5G28680 AT5G28680
fragaria_vesca	FvH4_4g19690 FvH4_6g02670
malus_domestica	MD04G1226200.v1.1 MD12G1243300.v1.1 MD13G1154700.v1.1
prunus_persica	Prupe.1G117700_v2.0.a1 Prupe.6G345000_v2.0.a1
pyrus_communis	pycom04g19940 pycom13g13150
rosa_chinensis	RchiOBHm_Chr3g0450621 RchiOBHm_Chr4g0425141
rosa_laevigata	RLG00000007395 RLG00000025717
rosa_multiflora	Rmu_sc0000078.1_g000041 Rmu_ssc0000420.1_g000041
rosa_roxburghii	Rroxscaffold_5G00367230 Rroxscaffold_6G00428300
rosa_rugosa	Rorug02G0629100 Rorug04G0201800
rosa_samantha	Rh3AG029800 Rh3BG030200 Rh3CG029100 Rh3DG029900 Rh4AG258400 Rh4BG264200 Rh4CG275300 Rh4DG260300
rosa_wichuraiana	Rw3G002300 Rw4G022370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1798
AccB7I	CCANNNNNTGG	1 cut(s)	1430
AccI	GTMKAC	3 cut(s)	1047, 2073, 2372
AccII	CGCG	3 cut(s)	995, 1061, 1755
AccIII	TCCGGA	1 cut(s)	589
AciI	CCGC	9 cut(s)	71, 546, 825, 993, 995, 1755, 2267, 2289, 2526
AclWI	GGATC	7 cut(s)	220, 254, 600, 1040, 2021, 2034, 2391
AcoI	YGGCCR	3 cut(s)	279, 1194, 2439
AcsI	RAATTY	6 cut(s)	175, 397, 619, 1561, 1640, 2252
AfaI	GTAC	9 cut(s)	269, 299, 455, 779, 905, 911, 1136, 1370, 1635
AfiI	CCNNNNNNNGG	7 cut(s)	70, 693, 751, 994, 1430, 2098, 2350
AflIII	ACRYGT	2 cut(s)	906, 1746
AhdI	GACNNNNNGTC	1 cut(s)	1747
AhlI	ACTAGT	1 cut(s)	1445
AjnI	CCWGG	2 cut(s)	242, 888
AjuI	GAANNNNNNNTTGG	2 cut(s)	8, 40
AleI	CACNNNNGTG	2 cut(s)	1446, 2000
Alw21I	GWGCWC	2 cut(s)	617, 1773
Alw26I	GTCTC	4 cut(s)	412, 1047, 1565, 1945
AlwI	GGATC	7 cut(s)	220, 254, 600, 1040, 2021, 2034, 2391
AlwNI	CAGNNNCTG	1 cut(s)	1337
Ama87I	CYCGRG	1 cut(s)	2302
Aor13HI	TCCGGA	1 cut(s)	589
ApeKI	GCWGC	8 cut(s)	336, 1316, 1328, 1331, 1334, 1349, 1505, 1835
ApoI	RAATTY	6 cut(s)	175, 397, 619, 1561, 1640, 2252
ArsI	GACNNNNNNTTYG	2 cut(s)	143, 175
Asp700I	GAANNNNTTC	1 cut(s)	398
AspLEI	GCGC	2 cut(s)	1527, 2546
AspS9I	GGNCC	5 cut(s)	187, 742, 839, 1199, 1967
AsuC2I	CCSGG	1 cut(s)	80
AsuHPI	GGTGA	3 cut(s)	244, 463, 961
AsuII	TTCGAA	1 cut(s)	173
AvaI	CYCGRG	1 cut(s)	2302
AvaII	GGWCC	3 cut(s)	742, 839, 1199
AxyI	CCTNAGG	2 cut(s)	305, 688
BaeGI	GKGCMC	1 cut(s)	2170
BalI	TGGCCA	1 cut(s)	2441
BamHI	GGATCC	1 cut(s)	2026
BanII	GRGCYC	3 cut(s)	80, 617, 1956
BbsI	GAAGAC	1 cut(s)	1722
Bbv12I	GWGCWC	2 cut(s)	617, 1773
BbvI	GCAGC	8 cut(s)	348, 1315, 1321, 1328, 1336, 1343, 1492, 1847
BccI	CCATC	5 cut(s)	839, 1014, 1866, 2431, 2512
BceAI	ACGGC	1 cut(s)	1171
BcgI	CGANNNNNNTGC	2 cut(s)	2535, 2569
BciT130I	CCWGG	2 cut(s)	244, 890
BciVI	GTATCC	1 cut(s)	1114
BcnI	CCSGG	1 cut(s)	80
BcoDI	GTCTC	4 cut(s)	412, 1047, 1565, 1945
BcuI	ACTAGT	1 cut(s)	1445
BfaI	CTAG	4 cut(s)	1446, 2156, 2195, 2415
BfmI	CTRYAG	2 cut(s)	1002, 1329
BfoI	RGCGCY	1 cut(s)	1528
BfuI	GTATCC	1 cut(s)	1114
BglI	GCCNNNNNGGC	1 cut(s)	353
BmcAI	AGTACT	2 cut(s)	455, 1136
Bme1390I	CCNGG	3 cut(s)	80, 244, 890
Bme18I	GGWCC	3 cut(s)	742, 839, 1199
BmeRI	GACNNNNNGTC	1 cut(s)	1747
BmeT110I	CYCGRG	1 cut(s)	2302
BmgT120I	GGNCC	5 cut(s)	187, 742, 839, 1199, 1967
BmiI	GGNNCC	9 cut(s)	13, 465, 685, 743, 744, 840, 999, 2028, 2327
BmrFI	CCNGG	3 cut(s)	80, 244, 890
BmrI	ACTGGG	1 cut(s)	747
BmsI	GCATC	7 cut(s)	81, 115, 1117, 1132, 1650, 2253, 2401
BmuI	ACTGGG	1 cut(s)	747
BpiI	GAAGAC	1 cut(s)	1722
BpmI	CTGGAG	2 cut(s)	1838, 2327
Bpu10I	CCTNAGC	1 cut(s)	1935
Bpu14I	TTCGAA	1 cut(s)	173
BpuEI	CTTGAG	2 cut(s)	1494, 2351
BpuMI	CCSGG	1 cut(s)	80
BsaAI	YACGTR	1 cut(s)	267
BsaI	GGTCTC	1 cut(s)	1945
BsaJI	CCNNGG	5 cut(s)	459, 474, 672, 993, 1390
BsaWI	WCCGGW	2 cut(s)	8, 589
BsaXI	ACNNNNNCTCC	4 cut(s)	668, 698, 1468, 1498
Bsc4I	CCNNNNNNNGG	7 cut(s)	70, 693, 751, 994, 1430, 2098, 2350
Bse118I	RCCGGY	3 cut(s)	277, 1196, 1515
Bse1I	ACTGG	4 cut(s)	742, 1186, 1969, 2344
Bse21I	CCTNAGG	2 cut(s)	305, 688
Bse3DI	GCAATG	2 cut(s)	1359, 2173
BseAI	TCCGGA	1 cut(s)	589
BseBI	CCWGG	2 cut(s)	244, 890
BseDI	CCNNGG	5 cut(s)	459, 474, 672, 993, 1390
BseGI	GGATG	6 cut(s)	484, 885, 1025, 1108, 1924, 2507
BseLI	CCNNNNNNNGG	7 cut(s)	70, 693, 751, 994, 1430, 2098, 2350
BseMI	GCAATG	2 cut(s)	1359, 2173
BseMII	CTCAG	4 cut(s)	120, 319, 2274, 2473
BseNI	ACTGG	4 cut(s)	742, 1186, 1969, 2344
BseRI	GAGGAG	2 cut(s)	1338, 1489
BseSI	GKGCMC	1 cut(s)	2170
BseXI	GCAGC	8 cut(s)	348, 1315, 1321, 1328, 1336, 1343, 1492, 1847
BseYI	CCCAGC	1 cut(s)	1337
BsgI	GTGCAG	2 cut(s)	195, 1540
Bsh1236I	CGCG	3 cut(s)	995, 1061, 1755
BsiHKAI	GWGCWC	2 cut(s)	617, 1773
BsiHKCI	CYCGRG	1 cut(s)	2302
BsiSI	CCGG	6 cut(s)	9, 80, 278, 590, 1197, 1516
BslFI	GGGAC	3 cut(s)	527, 728, 2371
BslI	CCNNNNNNNGG	7 cut(s)	70, 693, 751, 994, 1430, 2098, 2350
BsmAI	GTCTC	4 cut(s)	412, 1047, 1565, 1945
BsmBI	CGTCTC	1 cut(s)	412
BsmFI	GGGAC	3 cut(s)	527, 728, 2371
Bso31I	GGTCTC	1 cut(s)	1945
BsoBI	CYCGRG	1 cut(s)	2302
Bsp119I	TTCGAA	1 cut(s)	173
Bsp1286I	GDGCHC	5 cut(s)	80, 617, 1773, 1956, 2170
Bsp13I	TCCGGA	1 cut(s)	589
Bsp1407I	TGTACA	1 cut(s)	909
BspACI	CCGC	9 cut(s)	71, 546, 825, 993, 995, 1755, 2267, 2289, 2526
BspCNI	CTCAG	4 cut(s)	119, 318, 2275, 2472
BspEI	TCCGGA	1 cut(s)	589
BspFNI	CGCG	3 cut(s)	995, 1061, 1755
BspLI	GGNNCC	9 cut(s)	13, 465, 685, 743, 744, 840, 999, 2028, 2327
BspMAI	CTGCAG	1 cut(s)	1333
BspPI	GGATC	7 cut(s)	220, 254, 600, 1040, 2021, 2034, 2391
BspT104I	TTCGAA	1 cut(s)	173
BspTNI	GGTCTC	1 cut(s)	1945
BsrDI	GCAATG	2 cut(s)	1359, 2173
BsrFI	RCCGGY	3 cut(s)	277, 1196, 1515
BsrGI	TGTACA	1 cut(s)	909
BsrI	ACTGG	4 cut(s)	742, 1186, 1969, 2344
BssAI	RCCGGY	3 cut(s)	277, 1196, 1515
BssECI	CCNNGG	5 cut(s)	459, 474, 672, 993, 1390
BssNAI	GTATAC	1 cut(s)	1048
BssT1I	CCWWGG	3 cut(s)	474, 672, 1390
Bst1107I	GTATAC	1 cut(s)	1048
Bst2UI	CCWGG	2 cut(s)	244, 890
Bst4CI	ACNGT	4 cut(s)	713, 1134, 1484, 1999
Bst6I	CTCTTC	2 cut(s)	1236, 1598
BstAPI	GCANNNNNTGC	1 cut(s)	2117
BstAUI	TGTACA	1 cut(s)	909
BstBAI	YACGTR	1 cut(s)	267
BstBI	TTCGAA	1 cut(s)	173
BstC8I	GCNNGC	9 cut(s)	65, 69, 76, 279, 354, 435, 1418, 1523, 2118
BstDEI	CTNAG	9 cut(s)	53, 106, 288, 305, 688, 1763, 1935, 2283, 2459
BstDSI	CCRYGG	2 cut(s)	459, 993
BstEII	GGTNACC	1 cut(s)	144
BstENI	CCTNNNNNAGG	2 cut(s)	691, 2096
BstF5I	GGATG	6 cut(s)	484, 885, 1025, 1108, 1924, 2507
BstFNI	CGCG	3 cut(s)	995, 1061, 1755
BstH2I	RGCGCY	1 cut(s)	1528
BstHHI	GCGC	2 cut(s)	1527, 2546
BstMAI	GTCTC	4 cut(s)	412, 1047, 1565, 1945
BstMWI	GCNNNNNNNGC	8 cut(s)	125, 353, 1105, 1325, 1334, 2117, 2165, 2264
BstNI	CCWGG	2 cut(s)	244, 890
BstNSI	RCATGY	2 cut(s)	910, 1750
BstPI	GGTNACC	1 cut(s)	144
BstSCI	CCNGG	3 cut(s)	78, 242, 888
BstSFI	CTRYAG	2 cut(s)	1002, 1329
BstSLI	GKGCMC	1 cut(s)	2170
BstUI	CGCG	3 cut(s)	995, 1061, 1755
BstV1I	GCAGC	8 cut(s)	348, 1315, 1321, 1328, 1336, 1343, 1492, 1847
BstV2I	GAAGAC	1 cut(s)	1722
BstX2I	RGATCY	3 cut(s)	225, 246, 2026
BstYI	RGATCY	3 cut(s)	225, 246, 2026
BstZ17I	GTATAC	1 cut(s)	1048
Bsu36I	CCTNAGG	2 cut(s)	305, 688
BsuI	GTATCC	1 cut(s)	1114
BtgI	CCRYGG	2 cut(s)	459, 993
BtsCI	GGATG	6 cut(s)	484, 885, 1025, 1108, 1924, 2507
BtsI	GCAGTG	1 cut(s)	1145
BtsIMutI	CAGTG	1 cut(s)	1145
Cac8I	GCNNGC	9 cut(s)	65, 69, 76, 279, 354, 435, 1418, 1523, 2118
CaiI	CAGNNNCTG	1 cut(s)	1337
CfoI	GCGC	2 cut(s)	1527, 2546
Cfr10I	RCCGGY	3 cut(s)	277, 1196, 1515
Cfr13I	GGNCC	5 cut(s)	187, 742, 839, 1199, 1967
Cfr42I	CCGCGG	1 cut(s)	996
CseI	GACGC	1 cut(s)	394
CsiI	ACCWGGT	1 cut(s)	888
Csp6I	GTAC	9 cut(s)	268, 298, 454, 778, 904, 910, 1135, 1369, 1634
CviAII	CATG	8 cut(s)	235, 876, 907, 1301, 1747, 1803, 2236, 2434
CviQI	GTAC	9 cut(s)	268, 298, 454, 778, 904, 910, 1135, 1369, 1634
DdeI	CTNAG	9 cut(s)	53, 106, 288, 305, 688, 1763, 1935, 2283, 2459
DrdI	GACNNNNNNGTC	1 cut(s)	1798
DriI	GACNNNNNGTC	1 cut(s)	1747
DseDI	GACNNNNNNGTC	1 cut(s)	1798
EaeI	YGGCCR	3 cut(s)	279, 1194, 2439
Eam1104I	CTCTTC	2 cut(s)	1236, 1598
Eam1105I	GACNNNNNGTC	1 cut(s)	1747
EarI	CTCTTC	2 cut(s)	1236, 1598
Ecl136II	GAGCTC	1 cut(s)	615
Eco130I	CCWWGG	3 cut(s)	474, 672, 1390
Eco147I	AGGCCT	2 cut(s)	356, 2116
Eco24I	GRGCYC	3 cut(s)	80, 617, 1956
Eco31I	GGTCTC	1 cut(s)	1945
Eco32I	GATATC	1 cut(s)	787
Eco47I	GGWCC	3 cut(s)	742, 839, 1199
Eco53kI	GAGCTC	1 cut(s)	615
Eco81I	CCTNAGG	2 cut(s)	305, 688
Eco88I	CYCGRG	1 cut(s)	2302
Eco91I	GGTNACC	1 cut(s)	144
EcoICRI	GAGCTC	1 cut(s)	615
EcoNI	CCTNNNNNAGG	2 cut(s)	691, 2096
EcoO109I	RGGNCCY	2 cut(s)	742, 839
EcoO65I	GGTNACC	1 cut(s)	144
EcoRI	GAATTC	2 cut(s)	175, 1640
EcoRII	CCWGG	2 cut(s)	242, 888
EcoRV	GATATC	1 cut(s)	787
EcoT14I	CCWWGG	3 cut(s)	474, 672, 1390
EcoT38I	GRGCYC	3 cut(s)	80, 617, 1956
ErhI	CCWWGG	3 cut(s)	474, 672, 1390
Esp3I	CGTCTC	1 cut(s)	412
FaeI	CATG	8 cut(s)	238, 879, 910, 1304, 1750, 1806, 2239, 2437
FalI	AAGNNNNNCTT	4 cut(s)	1241, 1273, 1997, 2029
FaqI	GGGAC	3 cut(s)	527, 728, 2371
FatI	CATG	8 cut(s)	234, 875, 906, 1300, 1746, 1802, 2235, 2433
FauI	CCCGC	1 cut(s)	553
FblI	GTMKAC	3 cut(s)	1047, 2073, 2372
FokI	GGATG	6 cut(s)	491, 892, 1032, 1095, 1931, 2494
FriOI	GRGCYC	3 cut(s)	80, 617, 1956
FspBI	CTAG	4 cut(s)	1446, 2156, 2195, 2415
GlaI	GCGC	2 cut(s)	1526, 2545
GsaI	CCCAGC	1 cut(s)	1341
GsuI	CTGGAG	2 cut(s)	1838, 2327
HaeII	RGCGCY	1 cut(s)	1528
HapII	CCGG	6 cut(s)	9, 80, 278, 590, 1197, 1516
HgaI	GACGC	1 cut(s)	394
HhaI	GCGC	2 cut(s)	1527, 2546
Hin1II	CATG	8 cut(s)	238, 879, 910, 1304, 1750, 1806, 2239, 2437
Hin6I	GCGC	2 cut(s)	1525, 2544
HinP1I	GCGC	2 cut(s)	1525, 2544
HincII	GTYRAC	2 cut(s)	505, 2373
HindII	GTYRAC	2 cut(s)	505, 2373
HindIII	AAGCTT	2 cut(s)	435, 1172
HpaII	CCGG	6 cut(s)	9, 80, 278, 590, 1197, 1516
HphI	GGTGA	3 cut(s)	244, 463, 961
Hpy166II	GTNNAC	8 cut(s)	6, 505, 1048, 1369, 1636, 2074, 2233, 2373
Hpy188III	TCNNGA	9 cut(s)	485, 590, 842, 1026, 1118, 1645, 1957, 2030, 2195
Hpy8I	GTNNAC	8 cut(s)	6, 505, 1048, 1369, 1636, 2074, 2233, 2373
Hpy99I	CGWCG	2 cut(s)	650, 2575
HpyAV	CCTTC	8 cut(s)	232, 610, 687, 1224, 1865, 1999, 2144, 2215
HpyCH4III	ACNGT	4 cut(s)	713, 1134, 1484, 1999
HpyCH4IV	ACGT	3 cut(s)	266, 645, 1989
HpyF10VI	GCNNNNNNNGC	8 cut(s)	125, 353, 1105, 1325, 1334, 2117, 2165, 2264
HpyF3I	CTNAG	9 cut(s)	53, 106, 288, 305, 688, 1763, 1935, 2283, 2459
HpySE526I	ACGT	3 cut(s)	266, 645, 1989
Hsp92II	CATG	8 cut(s)	238, 879, 910, 1304, 1750, 1806, 2239, 2437
HspAI	GCGC	2 cut(s)	1525, 2544
KflI	GGGWCCC	1 cut(s)	742
Kpn2I	TCCGGA	1 cut(s)	589
KroI	GCCGGC	1 cut(s)	277
KroNI	GCCGGC	1 cut(s)	279
KspI	CCGCGG	1 cut(s)	996
LmnI	GCTCC	7 cut(s)	469, 689, 808, 997, 1313, 1325, 1832
Lsp1109I	GCAGC	8 cut(s)	348, 1315, 1321, 1328, 1336, 1343, 1492, 1847
LweI	GCATC	7 cut(s)	81, 115, 1117, 1132, 1650, 2253, 2401
MabI	ACCWGGT	1 cut(s)	888
MaeI	CTAG	4 cut(s)	1446, 2156, 2195, 2415
MaeII	ACGT	3 cut(s)	266, 645, 1989
MaeIII	GTNAC	6 cut(s)	144, 163, 382, 1478, 1749, 1985
MboII	GAAGA	9 cut(s)	241, 406, 1253, 1390, 1615, 1727, 2210, 2501, 2542
MflI	RGATCY	3 cut(s)	225, 246, 2026
MhlI	GDGCHC	5 cut(s)	80, 617, 1773, 1956, 2170
MlsI	TGGCCA	1 cut(s)	2441
MluNI	TGGCCA	1 cut(s)	2441
MlyI	GAGTC	7 cut(s)	77, 146, 390, 671, 1395, 1786, 2396
MmeI	TCCRAC	4 cut(s)	562, 1206, 1570, 2424
Mox20I	TGGCCA	1 cut(s)	2441
MroI	TCCGGA	1 cut(s)	589
MroNI	GCCGGC	1 cut(s)	277
MroXI	GAANNNNTTC	1 cut(s)	398
MscI	TGGCCA	1 cut(s)	2441
MseI	TTAA	1 cut(s)	981
MslI	CAYNNNNRTG	5 cut(s)	878, 1364, 1446, 1890, 2000
Msp20I	TGGCCA	1 cut(s)	2441
MspA1I	CMGCKG	4 cut(s)	995, 1334, 1505, 2267
MspI	CCGG	6 cut(s)	9, 80, 278, 590, 1197, 1516
MspR9I	CCNGG	3 cut(s)	80, 244, 890
MvaI	CCWGG	2 cut(s)	244, 890
MvnI	CGCG	3 cut(s)	995, 1061, 1755
MwoI	GCNNNNNNNGC	8 cut(s)	125, 353, 1105, 1325, 1334, 2117, 2165, 2264
NaeI	GCCGGC	1 cut(s)	279
NciI	CCSGG	1 cut(s)	80
NgoMIV	GCCGGC	1 cut(s)	277
NlaIII	CATG	8 cut(s)	238, 879, 910, 1304, 1750, 1806, 2239, 2437
NlaIV	GGNNCC	9 cut(s)	13, 465, 685, 743, 744, 840, 999, 2028, 2327
NmeAIII	GCCGAG	2 cut(s)	75, 373
NmuCI	GTSAC	3 cut(s)	382, 1749, 1985
NspI	RCATGY	2 cut(s)	910, 1750
NspV	TTCGAA	1 cut(s)	173
OliI	CACNNNNGTG	2 cut(s)	1446, 2000
PceI	AGGCCT	2 cut(s)	356, 2116
PciI	ACATGT	2 cut(s)	906, 1746
PdiI	GCCGGC	1 cut(s)	279
PdmI	GAANNNNTTC	1 cut(s)	398
PfeI	GAWTC	4 cut(s)	955, 1400, 1704, 2191
PflMI	CCANNNNNTGG	1 cut(s)	1430
PleI	GAGTC	7 cut(s)	77, 146, 389, 671, 1394, 1786, 2396
PpsI	GAGTC	7 cut(s)	77, 146, 389, 671, 1394, 1786, 2396
Ppu21I	YACGTR	1 cut(s)	267
PpuMI	RGGWCCY	2 cut(s)	742, 839
PscI	ACATGT	2 cut(s)	906, 1746
Psp124BI	GAGCTC	1 cut(s)	617
Psp5II	RGGWCCY	2 cut(s)	742, 839
Psp6I	CCWGG	2 cut(s)	242, 888
PspEI	GGTNACC	1 cut(s)	144
PspFI	CCCAGC	1 cut(s)	1337
PspGI	CCWGG	2 cut(s)	242, 888
PspN4I	GGNNCC	9 cut(s)	13, 465, 685, 743, 744, 840, 999, 2028, 2327
PspPI	GGNCC	5 cut(s)	187, 742, 839, 1199, 1967
PspPPI	RGGWCCY	2 cut(s)	742, 839
PsrI	GAACNNNNNNTAC	2 cut(s)	1617, 1649
PstI	CTGCAG	1 cut(s)	1333
PstNI	CAGNNNCTG	1 cut(s)	1337
PsuI	RGATCY	3 cut(s)	225, 246, 2026
PvuII	CAGCTG	2 cut(s)	1334, 1505
RsaI	GTAC	9 cut(s)	269, 299, 455, 779, 905, 911, 1136, 1370, 1635
RsaNI	GTAC	9 cut(s)	268, 298, 454, 778, 904, 910, 1135, 1369, 1634
RseI	CAYNNNNRTG	5 cut(s)	878, 1364, 1446, 1890, 2000
SacI	GAGCTC	1 cut(s)	617
SacII	CCGCGG	1 cut(s)	996
SalI	GTCGAC	1 cut(s)	2371
SaqAI	TTAA	1 cut(s)	981
Sau96I	GGNCC	5 cut(s)	187, 742, 839, 1199, 1967
ScaI	AGTACT	2 cut(s)	455, 1136
SchI	GAGTC	7 cut(s)	77, 146, 390, 671, 1395, 1786, 2396
ScrFI	CCNGG	3 cut(s)	80, 244, 890
SduI	GDGCHC	5 cut(s)	80, 617, 1773, 1956, 2170
SexAI	ACCWGGT	1 cut(s)	888
SfaNI	GCATC	7 cut(s)	81, 115, 1117, 1132, 1650, 2253, 2401
SfcI	CTRYAG	2 cut(s)	1002, 1329
Sfr303I	CCGCGG	1 cut(s)	996
SfuI	TTCGAA	1 cut(s)	173
SgrBI	CCGCGG	1 cut(s)	996
SinI	GGWCC	3 cut(s)	742, 839, 1199
SmiMI	CAYNNNNRTG	5 cut(s)	878, 1364, 1446, 1890, 2000
SmlI	CTYRAG	2 cut(s)	1509, 2330
SmoI	CTYRAG	2 cut(s)	1509, 2330
SpeI	ACTAGT	1 cut(s)	1445
SseBI	AGGCCT	2 cut(s)	356, 2116
SsiI	CCGC	9 cut(s)	71, 546, 825, 993, 995, 1755, 2267, 2289, 2526
SspI	AATATT	1 cut(s)	1167
SspMI	CTAG	4 cut(s)	1446, 2156, 2195, 2415
SstI	GAGCTC	1 cut(s)	617
StuI	AGGCCT	2 cut(s)	356, 2116
StyD4I	CCNGG	3 cut(s)	78, 242, 888
StyI	CCWWGG	3 cut(s)	474, 672, 1390
TaaI	ACNGT	4 cut(s)	713, 1134, 1484, 1999
TaiI	ACGT	3 cut(s)	269, 648, 1992
TaqI	TCGA	8 cut(s)	155, 173, 564, 603, 617, 1958, 2372, 2578
TaqII	GACCGA	2 cut(s)	490, 1664
TatI	WGTACW	6 cut(s)	453, 777, 903, 909, 1134, 1633
TauI	GCSGC	3 cut(s)	74, 1758, 2528
TfiI	GAWTC	4 cut(s)	955, 1400, 1704, 2191
Tru1I	TTAA	1 cut(s)	981
Tru9I	TTAA	1 cut(s)	981
TscAI	CASTG	1 cut(s)	1152
TseFI	GTSAC	3 cut(s)	382, 1749, 1985
TseI	GCWGC	8 cut(s)	336, 1316, 1328, 1331, 1334, 1349, 1505, 1835
Tsp45I	GTSAC	3 cut(s)	382, 1749, 1985
TspDTI	ATGAA	6 cut(s)	129, 251, 1089, 1559, 1737, 1874
TspGWI	ACGGA	2 cut(s)	169, 448
TspRI	CASTG	1 cut(s)	1152
Van91I	CCANNNNNTGG	1 cut(s)	1430
VpaK11BI	GGWCC	3 cut(s)	742, 839, 1199
XagI	CCTNNNNNAGG	2 cut(s)	691, 2096
XapI	RAATTY	6 cut(s)	175, 397, 619, 1561, 1640, 2252
XbaI	TCTAGA	1 cut(s)	2194
XceI	RCATGY	2 cut(s)	910, 1750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	481
XmiI	GTMKAC	3 cut(s)	1047, 2073, 2372
XmnI	GAANNNNTTC	1 cut(s)	398
XspI	CTAG	4 cut(s)	1446, 2156, 2195, 2415
ZrmI	AGTACT	2 cut(s)	455, 1136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.