Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0006411

Physical Location & Seq

Genomic Coordinates Reverse (-)

22454954 .. 22457581

Gene Structure 2628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g21150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2457 bp

ATGTCAGGGACCAACGTGATTTTAACGTACAAGCGAAAGCGGCAATCAAGAAAAGATCTTGTAGAGGGACTTGAGTGCCATGATGCTCTTTTTGTTGCTCCGAGTGATACTTCTCCATGTAGAGAAGACTTGCAAGTTCATTTGATTGAAGAGCGTTCAGCCAAAGGCGATAGCAGACTGGGGGATAAGAAACAAGTTAAAGTATCTGAGCCGAGACAATTGACAATTAATTCCCATAAATTTCTGACAAGTCTCAATGAGGGTCCCTCTGAAAGGGATGCATATGGATCGTCTTCTATGGACCTATCATTGGAGAATAAGTCAAGTCACCAGAAAGTTGGCTCGTCCTCAAATACTAATAGTGAAGCGTTGGTTGATGATAGTAATGTTGGAGGGAGGTTAGTTTGCAGATTGACAGGGAATGCCACTGAAATGACTACTGATTTTGTCCGACCAAAATCATCATCATCATCATTTGAAAGAAAAAGTGGCTCTAAATGTGTTGGTATATCACTAAGATTGAATGTATCAAACCTGGAAGACACTGATTCACTCTCTAAAAATAAGGTAGATAACTCATGTGGTGATTCAGCTGTGCAGACCAAGTCGACTGCCCCATTGATTACTTTCTGCCGAAGGAAAAAAAGAAGAAAGGATACAGATAAGTCTGATATACAAAGAAAATCTGTGCCTGTGGAAAACAATTGCTCATTGGTAACCAAATTGAGTAATTCTGTTGGTGCTAATGCCGCTTCATGTGACGAAACTTCCCCTGAAAACTGCTCAGTAAATCATGAGACAGATTTGAAGCACTCCATAGACGATGCTCAAGTTTCGTCAAGTGATGATCTTAAAGCGACAGAAATCCCTCGTTTAGGCAGATCACTTCCTTACTTGGACCTGTCTGTTATCCCAACTGATTCATGCGGCACCGTGGACTGCAATTTTGACTTAAACTTGAGTCCTGCTAAGCAATCTGACGCTGATGTGCCAAAAACTGTGGGGGACTCGTTGGATTCTACTAGCAGAAATCATGCCGCTGTATTACATAAACTGTCTCCTCCACAATTGTTGGCTGTGAGAACTGGAAGAGTGGAAACTCAAGCCTCACAATTACACAGAGATAGATTTGAATTTTTAGAAGTTGGTGCCAGAGGCAAAGATGATGATGATAAAGTTGGTTCTCTGATTTCTGAGGAATATACTTCCAAAAATAAATGTCTGCAGCTGTTTCCAGAAGAAAAAACCAGTGACATTTTTTGCCCTGTGATAACACATCCTGAGGTAGTTGCGTCTGTAGCTACAGAACGGAGAAAAGTTCTTCAGTTGGGAGGCCAACATGATCGATCAAAACAAGGATCTCCTATGTTTTTGGGTCCATCCTTAACCGAAAAACCTGTATTTGCAGGATGTGCTGCCAATACCTGCTTCAATACATCTCCCTTCTTGAACTCCATCATTGGAACAAGAGAATTCATCCGAGATGCAGCGCTCCAATCGTCTTCAAGCCGTTTATCATCAGTTTTGAGGCACAAGCTTATGCATGAGAGTGTAGTAAGCCAAGCAAAAGTTTTGAATGAAAAGGGTGGTTTTCATGACAAATATATGCCATATAATACCATGTGGTCTGAAGAAGAGTTGGATTTTCTATGGATGGGCGTGAGAAGATATGGACGGGACAATTGGAATGCTATGTTAAGGGATCCAAGATTGCACTTCTCACCATGGAGGGTGGAAAGGGACTTAGCTGAGCAGTGGGAAGAGGAACAATCAAAACTTTTTAGTGGCATTTGTGTTCCCCAATTGGGATGCAACTATTTCTCGGGTCCAAAAAGAGGAATATGGAAAGAAAATACAGCAGACATGACCCAAGTTTCACTTGGCGATGTTGATGCTTGTAGAGGAGGTGATGTCTCGAGGAGGCCACTATTCAAGTCCGCTTATACTTGCAACAATGGCAATGAAAACCACCGGAGGCCTCTTGGTTACACAAAGAGGACATCACGTTTTGAAATGGGAAGGGACACACATGAAGATGATGAATTTAGTATTCTAAATAGAAGTAGAAGAATTCGGAGGGGCGAGTTATTATCGACTGATGTCCCCACAACTTGCACTGGAGCACAGGGAAATTTGCCCCACTGGCTCAGAGAAGCTGTTGCTTCTCCACCCCCAAATGTGCCTTCAACTGTTTCATCAATTGCTCATTCAGACAGGTTGAATGTCACCTTTGCTGGTTTTGATCGTCGGGAATCACATTTGGCACCAAGGAATGAAATGAAGGTTACATGTGGTGGTTTAAGAGTAAATGCTCCTCTTTTCAACTACTCATCGGTAGGACTTGGGACGGGGAAACAGAGAAGGGATCATTCTCGTCGTGCCGGTAAACAAGAAGACGTAATTATTATAGCCAGCGATGGTTCTTCTGAAGAGACTATATCTGATGATCGTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

819

Amino Acids

90.68

Weight (kDa)

7.77

Isoelectric Point (pI)

56.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006411)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g00980 FvH4_6g00980 FvH4_6g00980
malus_domestica	MD04G1165900.v1.1 MD04G1239500.v1.1 MD12G1256600.v1.1
prunus_persica	Prupe.3G301900_v2.0.a1 Prupe.3G302000_v2.0.a1 Prupe.6G052100_v2.0.a1 Prupe.6G357400_v2.0.a1 Prupe.6G357700_v2.0.a1
pyrus_communis	pycom04g14760 pycom04g21150 pycom12g23530
rosa_chinensis	RchiOBHm_Chr3g0448441
rosa_laevigata	RLG00000025914
rosa_multiflora	Rmu_sc0003308.1_g000010 Rmu_sc0011979.1_g000002 Rmu_sc0024371.1_g000001 Rmu_sc0027902.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426630
rosa_rugosa	Rorug02G0612500
rosa_samantha	Rh3AG011900 Rh3BG011700 Rh3CG011400 Rh3DG012100
rosa_wichuraiana	Rw3G000920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1433
AccB1I	GGYRCC	3 cut(s)	929, 1148, 2263
AccI	GTMKAC	1 cut(s)	608
AciI	CCGC	5 cut(s)	40, 750, 927, 1038, 1938
AclWI	GGATC	5 cut(s)	295, 1366, 1697, 1710, 2373
AcsI	RAATTY	6 cut(s)	239, 1133, 1472, 2042, 2070, 2131
AcuI	CTGAAG	3 cut(s)	1307, 1650, 2448
AfaI	GTAC	1 cut(s)	29
AfeI	AGCGCT	1 cut(s)	1491
AfiI	CCNNNNNNNGG	5 cut(s)	273, 310, 875, 1805, 1835
AflIII	ACRYGT	1 cut(s)	2288
AjnI	CCWGG	1 cut(s)	534
AjuI	GAANNNNNNNTTGG	4 cut(s)	1412, 1444, 2167, 2199
AluBI	AGCT	6 cut(s)	593, 1228, 1301, 1537, 1748, 2156
AluI	AGCT	6 cut(s)	593, 1228, 1301, 1537, 1748, 2156
Alw21I	GWGCWC	1 cut(s)	2125
Alw26I	GTCTC	6 cut(s)	208, 257, 791, 1062, 1918, 2426
AlwI	GGATC	5 cut(s)	295, 1366, 1697, 1710, 2373
Ama87I	CYCGRG	2 cut(s)	1822, 1915
Aor51HI	AGCGCT	1 cut(s)	1491
AoxI	GGCC	3 cut(s)	1333, 1922, 1976
ApeKI	GCWGC	3 cut(s)	1225, 1415, 1487
ApoI	RAATTY	6 cut(s)	239, 1133, 1472, 2042, 2070, 2131
ArsI	GACNNNNNNTTYG	2 cut(s)	929, 961
AseI	ATTAAT	1 cut(s)	228
AspLEI	GCGC	1 cut(s)	1492
AspS9I	GGNCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
AsuHPI	GGTGA	5 cut(s)	320, 596, 1713, 1919, 2218
AvaI	CYCGRG	2 cut(s)	1822, 1915
AvaII	GGWCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
AxyI	CCTNAGG	1 cut(s)	1281
BamHI	GGATCC	1 cut(s)	1702
BanI	GGYRCC	3 cut(s)	929, 1148, 2263
BarI	GAAGNNNNNNTAC	2 cut(s)	640, 672
BbsI	GAAGAC	5 cut(s)	132, 285, 546, 1494, 2400
Bbv12I	GWGCWC	1 cut(s)	2125
BbvI	GCAGC	3 cut(s)	1237, 1402, 1499
BccI	CCATC	4 cut(s)	1387, 1463, 1648, 2411
BceAI	ACGGC	1 cut(s)	1494
BcgI	CGANNNNNNTGC	4 cut(s)	270, 304, 1874, 1908
BciT130I	CCWGG	1 cut(s)	536
BciVI	GTATCC	1 cut(s)	649
BcoDI	GTCTC	6 cut(s)	208, 257, 791, 1062, 1918, 2426
BfaI	CTAG	1 cut(s)	1023
BfmI	CTRYAG	3 cut(s)	1223, 1296, 1302
BfoI	RGCGCY	1 cut(s)	1493
BfuAI	ACCTGC	1 cut(s)	1433
BfuI	GTATCC	1 cut(s)	649
BglI	GCCNNNNNGGC	1 cut(s)	2143
BglII	AGATCT	1 cut(s)	55
BisI	GCNGC	7 cut(s)	41, 750, 928, 1038, 1226, 1416, 1488
BlpI	GCTNAGC	2 cut(s)	969, 1749
BlsI	GCNGC	7 cut(s)	42, 751, 929, 1039, 1227, 1417, 1489
Bme1390I	CCNGG	1 cut(s)	536
Bme18I	GGWCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
BmeT110I	CYCGRG	2 cut(s)	1822, 1915
BmgT120I	GGNCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
BmiI	GGNNCC	9 cut(s)	10, 264, 265, 931, 1150, 1377, 1704, 1827, 2265
BmrFI	CCNGG	1 cut(s)	536
BmrI	ACTGGG	1 cut(s)	188
BmsI	GCATC	6 cut(s)	73, 268, 814, 1474, 1799, 1882
BmuI	ACTGGG	1 cut(s)	188
BoxI	GACNNNNGTC	1 cut(s)	2099
BpiI	GAAGAC	5 cut(s)	132, 285, 546, 1494, 2400
BplI	GAGNNNNNCTC	2 cut(s)	251, 283
BpmI	CTGGAG	1 cut(s)	2139
Bpu1102I	GCTNAGC	2 cut(s)	969, 1749
BpuEI	CTTGAG	4 cut(s)	92, 813, 979, 1086
Bsa29I	ATCGAT	1 cut(s)	1345
BsaJI	CCNNGG	3 cut(s)	933, 1724, 2267
BsaWI	WCCGGW	1 cut(s)	1971
BsaXI	ACNNNNNCTCC	4 cut(s)	305, 335, 1896, 1926
Bsc4I	CCNNNNNNNGG	5 cut(s)	273, 310, 875, 1805, 1835
Bse118I	RCCGGY	1 cut(s)	2381
Bse1I	ACTGG	5 cut(s)	183, 1090, 1248, 2122, 2147
Bse21I	CCTNAGG	1 cut(s)	1281
Bse3DI	GCAATG	1 cut(s)	1966
BseBI	CCWGG	1 cut(s)	536
BseCI	ATCGAT	1 cut(s)	1345
BseDI	CCNNGG	3 cut(s)	933, 1724, 2267
BseGI	GGATG	7 cut(s)	283, 1276, 1379, 1415, 1476, 1659, 1814
BseLI	CCNNNNNNNGG	5 cut(s)	273, 310, 875, 1805, 1835
BseMI	GCAATG	1 cut(s)	1966
BseMII	CTCAG	6 cut(s)	198, 798, 1185, 1272, 1740, 2161
BseNI	ACTGG	5 cut(s)	183, 1090, 1248, 2122, 2147
BseRI	GAGGAG	4 cut(s)	1050, 1917, 1933, 2304
BseXI	GCAGC	3 cut(s)	1237, 1402, 1499
BsgI	GTGCAG	1 cut(s)	617
BshFI	GGCC	3 cut(s)	1335, 1924, 1978
BshNI	GGYRCC	3 cut(s)	929, 1148, 2263
BshVI	ATCGAT	1 cut(s)	1345
BsiHKAI	GWGCWC	1 cut(s)	2125
BsiHKCI	CYCGRG	2 cut(s)	1822, 1915
BsiSI	CCGG	2 cut(s)	1972, 2382
BslFI	GGGAC	9 cut(s)	22, 81, 249, 1019, 1691, 1754, 2036, 2087, 2359
BslI	CCNNNNNNNGG	5 cut(s)	273, 310, 875, 1805, 1835
BsmAI	GTCTC	6 cut(s)	208, 257, 791, 1062, 1918, 2426
BsmFI	GGGAC	9 cut(s)	22, 81, 249, 1019, 1691, 1754, 2036, 2087, 2359
BsmI	GAATGC	2 cut(s)	427, 1693
BsnI	GGCC	3 cut(s)	1335, 1924, 1978
BsoBI	CYCGRG	2 cut(s)	1822, 1915
Bsp1286I	GDGCHC	1 cut(s)	2125
Bsp1720I	GCTNAGC	2 cut(s)	969, 1749
Bsp19I	CCATGG	1 cut(s)	1724
BspACI	CCGC	5 cut(s)	40, 750, 927, 1038, 1938
BspANI	GGCC	3 cut(s)	1335, 1924, 1978
BspCNI	CTCAG	6 cut(s)	199, 797, 1186, 1273, 1741, 2160
BspDI	ATCGAT	1 cut(s)	1345
BspHI	TCATGA	2 cut(s)	793, 1594
BspLI	GGNNCC	9 cut(s)	10, 264, 265, 931, 1150, 1377, 1704, 1827, 2265
BspMAI	CTGCAG	1 cut(s)	1227
BspMI	ACCTGC	1 cut(s)	1433
BspPI	GGATC	5 cut(s)	295, 1366, 1697, 1710, 2373
BspQI	GCTCTTC	1 cut(s)	144
BspT107I	GGYRCC	3 cut(s)	929, 1148, 2263
BsrDI	GCAATG	1 cut(s)	1966
BsrFI	RCCGGY	1 cut(s)	2381
BsrI	ACTGG	5 cut(s)	183, 1090, 1248, 2122, 2147
BssAI	RCCGGY	1 cut(s)	2381
BssECI	CCNNGG	3 cut(s)	933, 1724, 2267
BssT1I	CCWWGG	2 cut(s)	1724, 2267
Bst2UI	CCWGG	1 cut(s)	536
Bst4CI	ACNGT	4 cut(s)	934, 1000, 1056, 2191
Bst6I	CTCTTC	5 cut(s)	144, 1084, 1629, 1755, 2424
BstAPI	GCANNNNNTGC	1 cut(s)	1412
BstC8I	GCNNGC	1 cut(s)	2413
BstDEI	CTNAG	9 cut(s)	207, 515, 784, 969, 1194, 1281, 1744, 1749, 2147
BstDSI	CCRYGG	2 cut(s)	933, 1724
BstEII	GGTNACC	1 cut(s)	715
BstENI	CCTNNNNNAGG	2 cut(s)	271, 873
BstF5I	GGATG	7 cut(s)	283, 1276, 1379, 1415, 1476, 1659, 1814
BstH2I	RGCGCY	1 cut(s)	1493
BstHHI	GCGC	1 cut(s)	1492
BstMAI	GTCTC	6 cut(s)	208, 257, 791, 1062, 1918, 2426
BstMWI	GCNNNNNNNGC	6 cut(s)	40, 749, 1298, 1412, 1956, 2143
BstNI	CCWGG	1 cut(s)	536
BstNSI	RCATGY	1 cut(s)	2292
BstPAI	GACNNNNGTC	1 cut(s)	2099
BstPI	GGTNACC	1 cut(s)	715
BstSCI	CCNGG	1 cut(s)	534
BstSFI	CTRYAG	3 cut(s)	1223, 1296, 1302
BstV1I	GCAGC	3 cut(s)	1237, 1402, 1499
BstV2I	GAAGAC	5 cut(s)	132, 285, 546, 1494, 2400
BstX2I	RGATCY	3 cut(s)	55, 1358, 1702
BstXI	CCANNNNNNTGG	1 cut(s)	338
BstYI	RGATCY	3 cut(s)	55, 1358, 1702
Bsu15I	ATCGAT	1 cut(s)	1345
Bsu36I	CCTNAGG	1 cut(s)	1281
BsuI	GTATCC	1 cut(s)	649
BsuRI	GGCC	3 cut(s)	1335, 1924, 1978
BsuTUI	ATCGAT	1 cut(s)	1345
BtgI	CCRYGG	2 cut(s)	933, 1724
BtgZI	GCGATG	2 cut(s)	1899, 2430
BtsCI	GGATG	7 cut(s)	283, 1276, 1379, 1415, 1476, 1659, 1814
BtsI	GCAGTG	1 cut(s)	1760
BtsIMutI	CAGTG	6 cut(s)	426, 543, 1255, 1760, 2115, 2140
BveI	ACCTGC	1 cut(s)	1433
Cac8I	GCNNGC	1 cut(s)	2413
CciI	TCATGA	2 cut(s)	793, 1594
CfoI	GCGC	1 cut(s)	1492
Cfr10I	RCCGGY	1 cut(s)	2381
Cfr13I	GGNCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
ClaI	ATCGAT	1 cut(s)	1345
CseI	GACGC	2 cut(s)	989, 1281
Csp6I	GTAC	1 cut(s)	28
CspCI	CAANNNNNGTGG	4 cut(s)	981, 1016, 1053, 1088
CviQI	GTAC	1 cut(s)	28
DdeI	CTNAG	9 cut(s)	207, 515, 784, 969, 1194, 1281, 1744, 1749, 2147
Eam1104I	CTCTTC	5 cut(s)	144, 1084, 1629, 1755, 2424
EarI	CTCTTC	5 cut(s)	144, 1084, 1629, 1755, 2424
Eco130I	CCWWGG	2 cut(s)	1724, 2267
Eco147I	AGGCCT	1 cut(s)	1978
Eco47I	GGWCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
Eco47III	AGCGCT	1 cut(s)	1491
Eco57I	CTGAAG	3 cut(s)	1307, 1650, 2448
Eco81I	CCTNAGG	1 cut(s)	1281
Eco88I	CYCGRG	2 cut(s)	1822, 1915
Eco91I	GGTNACC	1 cut(s)	715
EcoNI	CCTNNNNNAGG	2 cut(s)	271, 873
EcoO109I	RGGNCCY	1 cut(s)	263
EcoO65I	GGTNACC	1 cut(s)	715
EcoRI	GAATTC	2 cut(s)	1472, 2070
EcoRII	CCWGG	1 cut(s)	534
EcoT14I	CCWWGG	2 cut(s)	1724, 2267
EcoT22I	ATGCAT	2 cut(s)	283, 1545
ErhI	CCWWGG	2 cut(s)	1724, 2267
FalI	AAGNNNNNCTT	2 cut(s)	1863, 1895
FaqI	GGGAC	9 cut(s)	22, 81, 249, 1019, 1691, 1754, 2036, 2087, 2359
FauNDI	CATATG	1 cut(s)	283
FblI	GTMKAC	1 cut(s)	608
Fnu4HI	GCNGC	7 cut(s)	41, 750, 928, 1038, 1226, 1416, 1488
FokI	GGATG	7 cut(s)	290, 1263, 1366, 1422, 1463, 1666, 1821
Fsp4HI	GCNGC	7 cut(s)	41, 750, 928, 1038, 1226, 1416, 1488
FspBI	CTAG	1 cut(s)	1023
GlaI	GCGC	1 cut(s)	1491
GluI	GCNGC	7 cut(s)	41, 750, 928, 1038, 1226, 1416, 1488
GsuI	CTGGAG	1 cut(s)	2139
HaeII	RGCGCY	1 cut(s)	1493
HaeIII	GGCC	3 cut(s)	1335, 1924, 1978
HapII	CCGG	2 cut(s)	1972, 2382
HgaI	GACGC	2 cut(s)	989, 1281
HhaI	GCGC	1 cut(s)	1492
Hin6I	GCGC	1 cut(s)	1490
HinP1I	GCGC	1 cut(s)	1490
HincII	GTYRAC	1 cut(s)	609
HindII	GTYRAC	1 cut(s)	609
HindIII	AAGCTT	1 cut(s)	1535
HinfI	GANTC	7 cut(s)	548, 587, 920, 961, 1007, 1016, 2252
HpaII	CCGG	2 cut(s)	1972, 2382
HphI	GGTGA	5 cut(s)	320, 596, 1713, 1919, 2218
Hpy166II	GTNNAC	3 cut(s)	609, 937, 2387
Hpy188III	TCNNGA	8 cut(s)	48, 794, 1235, 1280, 1447, 1595, 1915, 2249
Hpy8I	GTNNAC	3 cut(s)	609, 937, 2387
Hpy99I	CGWCG	2 cut(s)	2250, 2379
HpyAV	CCTTC	6 cut(s)	630, 1453, 2013, 2193, 2275, 2355
HpyCH4III	ACNGT	4 cut(s)	934, 1000, 1056, 2191
HpyCH4IV	ACGT	4 cut(s)	15, 26, 2005, 2397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	40, 749, 1298, 1412, 1956, 2143
HpyF3I	CTNAG	9 cut(s)	207, 515, 784, 969, 1194, 1281, 1744, 1749, 2147
HpySE526I	ACGT	4 cut(s)	15, 26, 2005, 2397
HspAI	GCGC	1 cut(s)	1490
KflI	GGGWCCC	1 cut(s)	263
LguI	GCTCTTC	1 cut(s)	144
LmnI	GCTCC	4 cut(s)	103, 1497, 2120, 2317
Lsp1109I	GCAGC	3 cut(s)	1237, 1402, 1499
LweI	GCATC	6 cut(s)	73, 268, 814, 1474, 1799, 1882
MaeI	CTAG	1 cut(s)	1023
MaeII	ACGT	4 cut(s)	15, 26, 2005, 2397
MaeIII	GTNAC	7 cut(s)	326, 715, 758, 1250, 1985, 2224, 2284
MfeI	CAATTG	6 cut(s)	218, 703, 1067, 1681, 1802, 2199
MflI	RGATCY	3 cut(s)	55, 1358, 1702
MhlI	GDGCHC	1 cut(s)	2125
MlyI	GAGTC	2 cut(s)	970, 1001
MmeI	TCCRAC	4 cut(s)	370, 475, 993, 1620
Mph1103I	ATGCAT	2 cut(s)	283, 1545
MseI	TTAA	8 cut(s)	23, 198, 228, 852, 953, 1385, 1697, 2300
MslI	CAYNNNNRTG	3 cut(s)	431, 1548, 2034
MspA1I	CMGCKG	3 cut(s)	593, 1040, 1228
MspI	CCGG	2 cut(s)	1972, 2382
MspR9I	CCNGG	1 cut(s)	536
MunI	CAATTG	6 cut(s)	218, 703, 1067, 1681, 1802, 2199
Mva1269I	GAATGC	2 cut(s)	427, 1693
MvaI	CCWGG	1 cut(s)	536
MwoI	GCNNNNNNNGC	6 cut(s)	40, 749, 1298, 1412, 1956, 2143
NcoI	CCATGG	1 cut(s)	1724
NdeI	CATATG	1 cut(s)	283
NlaIV	GGNNCC	9 cut(s)	10, 264, 265, 931, 1150, 1377, 1704, 1827, 2265
NmeAIII	GCCGAG	1 cut(s)	237
NmuCI	GTSAC	4 cut(s)	326, 758, 1250, 2224
NsiI	ATGCAT	2 cut(s)	283, 1545
NspI	RCATGY	1 cut(s)	2292
PaeR7I	CTCGAG	1 cut(s)	1915
PagI	TCATGA	2 cut(s)	793, 1594
PceI	AGGCCT	1 cut(s)	1978
PciI	ACATGT	1 cut(s)	2288
PciSI	GCTCTTC	1 cut(s)	144
PctI	GAATGC	2 cut(s)	427, 1693
PfeI	GAWTC	5 cut(s)	548, 587, 920, 1016, 2252
PflFI	GACNNNGTC	1 cut(s)	604
PkrI	GCNGC	7 cut(s)	42, 751, 929, 1039, 1227, 1417, 1489
PleI	GAGTC	2 cut(s)	969, 1001
PpsI	GAGTC	2 cut(s)	969, 1001
PpuMI	RGGWCCY	1 cut(s)	263
PscI	ACATGT	1 cut(s)	2288
PshAI	GACNNNNGTC	1 cut(s)	2099
PshBI	ATTAAT	1 cut(s)	228
Psp5II	RGGWCCY	1 cut(s)	263
Psp6I	CCWGG	1 cut(s)	534
PspEI	GGTNACC	1 cut(s)	715
PspGI	CCWGG	1 cut(s)	534
PspN4I	GGNNCC	9 cut(s)	10, 264, 265, 931, 1150, 1377, 1704, 1827, 2265
PspPI	GGNCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
PspPPI	RGGWCCY	1 cut(s)	263
PstI	CTGCAG	1 cut(s)	1227
PsuI	RGATCY	3 cut(s)	55, 1358, 1702
PsyI	GACNNNGTC	1 cut(s)	604
PvuII	CAGCTG	2 cut(s)	593, 1228
RsaI	GTAC	1 cut(s)	29
RsaNI	GTAC	1 cut(s)	28
RseI	CAYNNNNRTG	3 cut(s)	431, 1548, 2034
SalI	GTCGAC	1 cut(s)	607
SapI	GCTCTTC	1 cut(s)	144
SaqAI	TTAA	8 cut(s)	23, 198, 228, 852, 953, 1385, 1697, 2300
SatI	GCNGC	7 cut(s)	41, 750, 928, 1038, 1226, 1416, 1488
Sau96I	GGNCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
SchI	GAGTC	2 cut(s)	970, 1001
ScrFI	CCNGG	1 cut(s)	536
SduI	GDGCHC	1 cut(s)	2125
SfaNI	GCATC	6 cut(s)	73, 268, 814, 1474, 1799, 1882
SfcI	CTRYAG	3 cut(s)	1223, 1296, 1302
Sfr274I	CTCGAG	1 cut(s)	1915
SinI	GGWCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
SlaI	CTCGAG	1 cut(s)	1915
SmiMI	CAYNNNNRTG	3 cut(s)	431, 1548, 2034
SmlI	CTYRAG	5 cut(s)	71, 828, 958, 1101, 1915
SmoI	CTYRAG	5 cut(s)	71, 828, 958, 1101, 1915
SseBI	AGGCCT	1 cut(s)	1978
SsiI	CCGC	5 cut(s)	40, 750, 927, 1038, 1938
SspMI	CTAG	1 cut(s)	1023
StuI	AGGCCT	1 cut(s)	1978
StyD4I	CCNGG	1 cut(s)	534
StyI	CCWWGG	2 cut(s)	1724, 2267
TaaI	ACNGT	4 cut(s)	934, 1000, 1056, 2191
TaiI	ACGT	4 cut(s)	18, 29, 2008, 2400
TaqI	TCGA	4 cut(s)	608, 1345, 1916, 2093
TauI	GCSGC	4 cut(s)	43, 752, 930, 1040
TfiI	GAWTC	5 cut(s)	548, 587, 920, 1016, 2252
Tru1I	TTAA	8 cut(s)	23, 198, 228, 852, 953, 1385, 1697, 2300
Tru9I	TTAA	8 cut(s)	23, 198, 228, 852, 953, 1385, 1697, 2300
TscAI	CASTG	6 cut(s)	433, 550, 1255, 1760, 2122, 2147
TseFI	GTSAC	4 cut(s)	326, 758, 1250, 2224
TseI	GCWGC	3 cut(s)	1225, 1415, 1487
Tsp45I	GTSAC	4 cut(s)	326, 758, 1250, 2224
TspGWI	ACGGA	1 cut(s)	1324
TspRI	CASTG	6 cut(s)	433, 550, 1255, 1760, 2122, 2147
Tth111I	GACNNNGTC	1 cut(s)	604
VpaK11BI	GGWCC	6 cut(s)	9, 263, 301, 898, 1376, 1826
VspI	ATTAAT	1 cut(s)	228
XagI	CCTNNNNNAGG	2 cut(s)	271, 873
XapI	RAATTY	6 cut(s)	239, 1133, 1472, 2042, 2070, 2131
XceI	RCATGY	1 cut(s)	2292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1877
XhoI	CTCGAG	1 cut(s)	1915
XmiI	GTMKAC	1 cut(s)	608
XspI	CTAG	1 cut(s)	1023
Zsp2I	ATGCAT	2 cut(s)	283, 1545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.