Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0006411

Physical Location & Seq

Genomic Coordinates Forward (+)

715714 .. 719433

Gene Structure 3720 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG011400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2700 bp

ATGTGGAAAAAGTGCAGCTGTTCTAGATTTGGAATTGCAACAAGGTTCATTTTGGAAGCTAAAATGTCTGGCAGCAAAGTGCTTTTAACATACAAGCGAAAGCGGCACTCAAGAAATGATCTTCTACAGGAAGATGGGTGTCATAATTCACCTTCTGACGCTGATGAGGATACTTATTTATCTAGGCCGGACATGCAAGTGCATTTGATTGATGAGAATGCATCAGAAGAATATGAAACAAAGACTACAGTATGCCGTCTATGTGTTGTATGCTGTGTCGGAGGTAACCTGACGCACTGTGATAAATGTCTTCAGTCTTATCATCTTGAATGCCTAGATAAGTCCCTCAAGCATACTGGTCATGGAACATTGCTAAGCTGTGGGTGTATTGCTGCTTCATTGGGTGATGATGGTAATGTGGGAAAGGGGGCAGTTAGCTTTGATGATAGTTCATTAAGGTTGAATTCATCAAACTTGGAAGAGACTGATTTGTTTGCTGAAATTAAGTTAGAGAACTCATGTGATGATCTGTCTGTACAAACCAAGTGGAAAACTCCATTACTTACTTTCCACCGGAGATATAAAAGAAAAAAAGATATGGATGGGTCTCACATACAAAGCAAATCACTGAATGTGGAAAATAACTGTTCAGTGATAACAGAATCAAAAAATTCTGCATGTGCCAAAACCACTTCATGTGAAGCAACTTCCCTTGAAAGCTTCTCACTAGATCATGGAGCAGATTTAAACCGCTGCAAAGAGGTTATTGATATTACATATTCTTATGCTGGACCGGCTCCTGGGTCTAAAATTTTGATGCGTGAAGAGAAGACAATGAATGAAGCTTTACAGCAAGCAGGAAAAGTTCCTGACCAAAGTGCTCAAACTTTGATGGATGTCAAAAAAGAGTCTGTGGATCATTTAGGAACCTCATTAAGTTGTGGTATGAACGATTCCTCTTCTGAAACTGTACCGTTGTGTACACAACCAGGAATAAATTCTCCGTTGGTAAAAGAGGAACCTCAAGTTTTGTCAAGTGATGATGATCATAAAGCAGCAGCAACCCTGCATTCGGGCAGATCCCTTCCTAATTTGAACCTGTCTGTGATCACCACTGATTCAAACAGTAGTACTATGGACTTGAATGTTGACTTAAATGTGAGTTCTCAAGAGCAACCTCTTCTTGCCGCGCCAAAAGCAACTCTGGACTCCTTCGAGTCTACTTGCAGAAGTCCTGCCACTGTCTTACATGAACCACCTCCTTCAGAAATAGTGGCCATAAAAAATGAGAGGATAGAAACTCAAGGTTCTCTGTTATGCAAAGATGCATTTGAGTTTTCAGAAGTTGGTGCCAGCTGTAAAGACTATGATCAAGTTACTCCTAACTTTGATTCAAAAAAAAAATGTCTGCAGTTATTTTCAGAAGAAAAAACCAGCGACATTTCCCACCCAGTGATAATCCAGCCTGAGGCGACTGCTTATATGGCCTCAGAGGAGAGAAAAATGCTCCAGTTGGGAAGCAACAATAATCAACCTAATCAAGGATCTCCACTGAATCTAGGTCTATCCTTACCAACTAAACCTTCAACTGCAGGATCTGCAACCAACGCCTGTTTCAATACATTTCCTTTCTTCAACTCCGTTACTGGAACCAGAGAATTTATCCAAGATGCAGCACTCCAATCTTCATCAAGCCATTTATCATCAGTTTTGAGATACAAGATGATGCATGATAGCATTGCAAGCCAAGCAAGAGCTTTGAATGAAATGGGCAGTGTCGATGACATATCTCAGTCACATAATACCATGTGGTCCGAAGAGGAGTTGGATTTCCTGTGGATAGGTGTGAGGAGATATGGACGGGACAATTGGAATGCTATGTTAACGGATCCGAGATTGCACTTCGCATCATGGAGGGTGGCAAGGGACTTAGCTATGCGGTGGAAAGAGGAACAGTCAAAACTTTTGAGTAGCATGTTTGGTCCACAAGTCAAGTATTCAAGAGCACAAGGCAGTTCTTTCTACCACAACAACTTGTTGGGTCCACAAACAGGATTCTGGCAACAAAACCCAGCAGATGAAACCCGACTCTCCCTTCGTGTTGTAGATTCTTGTAGAGGAGGTAATGTCTCGAGGAGGCCACTATTCAGATCAACTTATGTTTGCAACGATGGCCAGGAACACCTCCACAGGCCTCTTAGTTACCCGAAGAGGGTATCTCGTCGAAGGATCAAATATGATGAGGATGAATTTCGTAGTTCAAGTAGAAGTCGGAGTATGCTAAGGAGCAAGCTGTTGTCAACTGAACTTCCCTCAACTTGCAATATTGGAGTGAAGGGTAATATGCCCCAGTGGCTCCAAGAATCTGCTGTCGCTTCTCCTCCAAGTCTCAGGGCATCAATTCTGCCTTCAACCGCTTTATCTTTTGCGTTTGCCCATTCTGATACATTGAATGTTACCCCCCCTGATTTTGATCCCTCTGAATCACGTTGTGCAGAAAGGAAGGAAATGCAGTATGCATTTGGTGGTTCAAGAGAATATGACCTACAGCCATTAGTAAGTAGTGCTCCTCGTTGCAATTCAGGATTAAGACCTGAAATGGCTAAACCGGGAAGGGATTCTTCTCATGACGCTGGTAAACAAGATAATTTGATTGTTATAGACAGTGACGCTTCTTCTGAAGGGACCATATCCGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

899

Amino Acids

99.41

Weight (kDa)

5.84

Isoelectric Point (pI)

63.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006411)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g00980 FvH4_6g00980 FvH4_6g00980
malus_domestica	MD04G1165900.v1.1 MD04G1239500.v1.1 MD12G1256600.v1.1
prunus_persica	Prupe.3G301900_v2.0.a1 Prupe.3G302000_v2.0.a1 Prupe.6G052100_v2.0.a1 Prupe.6G357400_v2.0.a1 Prupe.6G357700_v2.0.a1
pyrus_communis	pycom04g14760 pycom04g21150 pycom12g23530
rosa_chinensis	RchiOBHm_Chr3g0448441
rosa_laevigata	RLG00000025914
rosa_multiflora	Rmu_sc0003308.1_g000010 Rmu_sc0011979.1_g000002 Rmu_sc0024371.1_g000001 Rmu_sc0027902.1_g000001
rosa_roxburghii	Rroxscaffold_6G00426630
rosa_rugosa	Rorug02G0612500
rosa_samantha	Rh3AG011900 Rh3BG011700 Rh3CG011400 Rh3DG012100
rosa_wichuraiana	Rw3G000920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1349
AccI	GTMKAC	1 cut(s)	1220
AccII	CGCG	1 cut(s)	1190
AciI	CCGC	5 cut(s)	103, 751, 1188, 1939, 2415
AclWI	GGATC	8 cut(s)	924, 1074, 1552, 1603, 1883, 1896, 2237, 2468
AcoI	YGGCCR	2 cut(s)	1275, 2173
AcsI	RAATTY	6 cut(s)	463, 670, 810, 997, 1658, 2249
AcuI	CTGAAG	3 cut(s)	296, 1248, 2700
AdeI	CACNNNGTG	2 cut(s)	1453, 2492
AfaI	GTAC	4 cut(s)	537, 972, 982, 1132
AfiI	CCNNNNNNNGG	6 cut(s)	800, 1072, 1468, 1541, 2051, 2212
AjnI	CCWGG	3 cut(s)	799, 988, 2175
AjuI	GAANNNNNNNTTGG	4 cut(s)	1567, 1598, 1599, 1630
Alw21I	GWGCWC	3 cut(s)	883, 2008, 2569
Alw26I	GTCTC	4 cut(s)	476, 612, 2134, 2393
AlwI	GGATC	8 cut(s)	924, 1074, 1552, 1603, 1883, 1896, 2237, 2468
AlwNI	CAGNNNCTG	1 cut(s)	1598
Ama87I	CYCGRG	1 cut(s)	2131
AoxI	GGCC	6 cut(s)	185, 1275, 1485, 2138, 2173, 2192
ApeKI	GCWGC	7 cut(s)	15, 72, 392, 753, 1055, 1058, 1673
ApoI	RAATTY	6 cut(s)	463, 670, 810, 997, 1658, 2249
ArsI	GACNNNNNNTTYG	2 cut(s)	2079, 2111
Asp700I	GAANNNNTTC	2 cut(s)	997, 2617
AspLEI	GCGC	1 cut(s)	1192
AspS9I	GGNCC	5 cut(s)	791, 1812, 1982, 2042, 2685
AsuC2I	CCSGG	1 cut(s)	2610
AsuHPI	GGTGA	3 cut(s)	141, 416, 1102
AvaI	CYCGRG	1 cut(s)	2131
AvaII	GGWCC	5 cut(s)	791, 1812, 1982, 2042, 2685
AxyI	CCTNAGG	1 cut(s)	1467
BalI	TGGCCA	2 cut(s)	1277, 2175
BamHI	GGATCC	1 cut(s)	1888
BanI	GGYRCC	1 cut(s)	1349
BarI	GAAGNNNNNNTAC	2 cut(s)	379, 411
BbsI	GAAGAC	2 cut(s)	302, 836
Bbv12I	GWGCWC	3 cut(s)	883, 2008, 2569
BbvI	GCAGC	7 cut(s)	27, 84, 379, 740, 1067, 1070, 1685
BccI	CCATC	5 cut(s)	128, 404, 596, 886, 2165
BceAI	ACGGC	1 cut(s)	240
BciT130I	CCWGG	3 cut(s)	801, 990, 2177
BciVI	GTATCC	1 cut(s)	163
BclI	TGATCA	3 cut(s)	1045, 1107, 1369
BcnI	CCSGG	1 cut(s)	2610
BcoDI	GTCTC	4 cut(s)	476, 612, 2134, 2393
BfaI	CTAG	5 cut(s)	24, 183, 335, 728, 1559
BfmI	CTRYAG	5 cut(s)	125, 246, 1409, 1590, 2546
BfuI	GTATCC	1 cut(s)	163
BglI	GCCNNNNNGGC	1 cut(s)	2353
BisI	GCNGC	9 cut(s)	16, 73, 104, 393, 754, 1056, 1059, 1188, 1674
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	9 cut(s)	17, 74, 105, 394, 755, 1057, 1060, 1189, 1675
BmcAI	AGTACT	1 cut(s)	1132
Bme1390I	CCNGG	4 cut(s)	801, 990, 2177, 2610
Bme18I	GGWCC	5 cut(s)	791, 1812, 1982, 2042, 2685
BmeT110I	CYCGRG	1 cut(s)	2131
BmgT120I	GGNCC	5 cut(s)	791, 1812, 1982, 2042, 2685
BmiI	GGNNCC	9 cut(s)	798, 928, 1020, 1351, 1651, 1890, 2043, 2357, 2686
BmrFI	CCNGG	4 cut(s)	801, 990, 2177, 2610
BmrI	ACTGGG	2 cut(s)	1445, 2344
BmsI	GCATC	7 cut(s)	230, 807, 1315, 1660, 1716, 1916, 2405
BmuI	ACTGGG	2 cut(s)	1445, 2344
BpiI	GAAGAC	2 cut(s)	302, 836
BplI	GAGNNNNNCTC	2 cut(s)	2203, 2235
BpmI	CTGGAG	1 cut(s)	1493
Bpu10I	CCTNAGC	1 cut(s)	2282
Bpu1102I	GCTNAGC	1 cut(s)	374
BpuEI	CTTGAG	5 cut(s)	94, 332, 1008, 1152, 1287
BpuMI	CCSGG	1 cut(s)	2610
BsaBI	GATNNNNATC	2 cut(s)	1044, 2472
BsaI	GGTCTC	1 cut(s)	612
BsaJI	CCNNGG	1 cut(s)	800
BsaWI	WCCGGW	1 cut(s)	573
BsaXI	ACNNNNNCTCC	2 cut(s)	2112, 2142
Bsc4I	CCNNNNNNNGG	6 cut(s)	800, 1072, 1468, 1541, 2051, 2212
Bse118I	RCCGGY	1 cut(s)	793
Bse1I	ACTGG	5 cut(s)	361, 1451, 1510, 1651, 2350
Bse21I	CCTNAGG	1 cut(s)	1467
Bse3DI	GCAATG	2 cut(s)	368, 1737
Bse8I	GATNNNNATC	2 cut(s)	1044, 2472
BseBI	CCWGG	3 cut(s)	801, 990, 2177
BseDI	CCNNGG	1 cut(s)	800
BseGI	GGATG	3 cut(s)	607, 901, 2251
BseJI	GATNNNNATC	2 cut(s)	1044, 2472
BseLI	CCNNNNNNNGG	6 cut(s)	800, 1072, 1468, 1541, 2051, 2212
BseMI	GCAATG	2 cut(s)	368, 1737
BseMII	CTCAG	4 cut(s)	1458, 1503, 1805, 2404
BseNI	ACTGG	5 cut(s)	361, 1451, 1510, 1651, 2350
BseRI	GAGGAG	7 cut(s)	1508, 1835, 1864, 2133, 2149, 2370, 2559
BseXI	GCAGC	7 cut(s)	27, 84, 379, 740, 1067, 1070, 1685
BseYI	CCCAGC	1 cut(s)	2071
BsgI	GTGCAG	2 cut(s)	34, 2514
Bsh1236I	CGCG	1 cut(s)	1190
BshFI	GGCC	6 cut(s)	187, 1277, 1487, 2140, 2175, 2194
BshNI	GGYRCC	1 cut(s)	1349
BsiHKAI	GWGCWC	3 cut(s)	883, 2008, 2569
BsiHKCI	CYCGRG	1 cut(s)	2131
BsiSI	CCGG	4 cut(s)	188, 574, 794, 2609
BslFI	GGGAC	3 cut(s)	328, 1877, 1940
BslI	CCNNNNNNNGG	6 cut(s)	800, 1072, 1468, 1541, 2051, 2212
BsmAI	GTCTC	4 cut(s)	476, 612, 2134, 2393
BsmFI	GGGAC	3 cut(s)	328, 1877, 1940
BsmI	GAATGC	4 cut(s)	223, 335, 1069, 1879
BsnI	GGCC	6 cut(s)	187, 1277, 1487, 2140, 2175, 2194
Bso31I	GGTCTC	1 cut(s)	612
BsoBI	CYCGRG	1 cut(s)	2131
Bsp1286I	GDGCHC	3 cut(s)	883, 2008, 2569
Bsp1407I	TGTACA	2 cut(s)	535, 980
Bsp1720I	GCTNAGC	1 cut(s)	374
BspACI	CCGC	5 cut(s)	103, 751, 1188, 1939, 2415
BspANI	GGCC	6 cut(s)	187, 1277, 1487, 2140, 2175, 2194
BspCNI	CTCAG	4 cut(s)	1459, 1502, 1804, 2403
BspFNI	CGCG	1 cut(s)	1190
BspHI	TCATGA	1 cut(s)	2626
BspLI	GGNNCC	9 cut(s)	798, 928, 1020, 1351, 1651, 1890, 2043, 2357, 2686
BspMAI	CTGCAG	2 cut(s)	1413, 1594
BspPI	GGATC	8 cut(s)	924, 1074, 1552, 1603, 1883, 1896, 2237, 2468
BspT107I	GGYRCC	1 cut(s)	1349
BspTNI	GGTCTC	1 cut(s)	612
BsrDI	GCAATG	2 cut(s)	368, 1737
BsrFI	RCCGGY	1 cut(s)	793
BsrGI	TGTACA	2 cut(s)	535, 980
BsrI	ACTGG	5 cut(s)	361, 1451, 1510, 1651, 2350
BssAI	RCCGGY	1 cut(s)	793
BssECI	CCNNGG	1 cut(s)	800
Bst2UI	CCWGG	3 cut(s)	801, 990, 2177
Bst4CI	ACNGT	9 cut(s)	250, 299, 647, 970, 975, 1127, 1243, 1956, 2666
Bst6I	CTCTTC	6 cut(s)	474, 819, 964, 1185, 1812, 2204
BstAPI	GCANNNNNTGC	1 cut(s)	1598
BstAUI	TGTACA	2 cut(s)	535, 980
BstC8I	GCNNGC	4 cut(s)	855, 1354, 1744, 2291
BstDEI	CTNAG	8 cut(s)	374, 1467, 1489, 1791, 1930, 2198, 2282, 2390
BstEII	GGTNACC	1 cut(s)	284
BstENI	CCTNNNNNAGG	1 cut(s)	1539
BstF5I	GGATG	3 cut(s)	607, 901, 2251
BstFNI	CGCG	1 cut(s)	1190
BstHHI	GCGC	1 cut(s)	1192
BstMAI	GTCTC	4 cut(s)	476, 612, 2134, 2393
BstNI	CCWGG	3 cut(s)	801, 990, 2177
BstNSI	RCATGY	3 cut(s)	196, 681, 1978
BstPI	GGTNACC	1 cut(s)	284
BstSCI	CCNGG	4 cut(s)	799, 988, 2175, 2608
BstSFI	CTRYAG	5 cut(s)	125, 246, 1409, 1590, 2546
BstUI	CGCG	1 cut(s)	1190
BstV1I	GCAGC	7 cut(s)	27, 84, 379, 740, 1067, 1070, 1685
BstV2I	GAAGAC	2 cut(s)	302, 836
BstX2I	RGATCY	4 cut(s)	1079, 1544, 1595, 1888
BstYI	RGATCY	4 cut(s)	1079, 1544, 1595, 1888
Bsu36I	CCTNAGG	1 cut(s)	1467
BsuI	GTATCC	1 cut(s)	163
BsuRI	GGCC	6 cut(s)	187, 1277, 1487, 2140, 2175, 2194
BtsCI	GGATG	3 cut(s)	607, 901, 2251
BtsI	GCAGTG	1 cut(s)	1780
Cac8I	GCNNGC	4 cut(s)	855, 1354, 1744, 2291
CaiI	CAGNNNCTG	1 cut(s)	1598
CciI	TCATGA	1 cut(s)	2626
CfoI	GCGC	1 cut(s)	1192
Cfr10I	RCCGGY	1 cut(s)	793
Cfr13I	GGNCC	5 cut(s)	791, 1812, 1982, 2042, 2685
CseI	GACGC	4 cut(s)	167, 301, 2639, 2678
Csp6I	GTAC	4 cut(s)	536, 971, 981, 1131
CspCI	CAANNNNNGTGG	2 cut(s)	527, 562
CviQI	GTAC	4 cut(s)	536, 971, 981, 1131
DdeI	CTNAG	8 cut(s)	374, 1467, 1489, 1791, 1930, 2198, 2282, 2390
DraI	TTTAAA	1 cut(s)	747
DraIII	CACNNNGTG	2 cut(s)	1453, 2492
EaeI	YGGCCR	2 cut(s)	1275, 2173
Eam1104I	CTCTTC	6 cut(s)	474, 819, 964, 1185, 1812, 2204
EarI	CTCTTC	6 cut(s)	474, 819, 964, 1185, 1812, 2204
Eco147I	AGGCCT	1 cut(s)	2194
Eco31I	GGTCTC	1 cut(s)	612
Eco47I	GGWCC	5 cut(s)	791, 1812, 1982, 2042, 2685
Eco57I	CTGAAG	3 cut(s)	296, 1248, 2700
Eco81I	CCTNAGG	1 cut(s)	1467
Eco88I	CYCGRG	1 cut(s)	2131
Eco91I	GGTNACC	1 cut(s)	284
EcoNI	CCTNNNNNAGG	1 cut(s)	1539
EcoO65I	GGTNACC	1 cut(s)	284
EcoRI	GAATTC	1 cut(s)	463
EcoRII	CCWGG	3 cut(s)	799, 988, 2175
EcoT22I	ATGCAT	4 cut(s)	223, 1330, 1731, 2521
FalI	AAGNNNNNCTT	2 cut(s)	2605, 2637
FaqI	GGGAC	3 cut(s)	328, 1877, 1940
FbaI	TGATCA	3 cut(s)	1045, 1107, 1369
FblI	GTMKAC	1 cut(s)	1220
Fnu4HI	GCNGC	9 cut(s)	16, 73, 104, 393, 754, 1056, 1059, 1188, 1674
FokI	GGATG	3 cut(s)	614, 908, 2258
Fsp4HI	GCNGC	9 cut(s)	16, 73, 104, 393, 754, 1056, 1059, 1188, 1674
FspBI	CTAG	5 cut(s)	24, 183, 335, 728, 1559
GlaI	GCGC	1 cut(s)	1191
GluI	GCNGC	9 cut(s)	16, 73, 104, 393, 754, 1056, 1059, 1188, 1674
GsaI	CCCAGC	1 cut(s)	2075
GsuI	CTGGAG	1 cut(s)	1493
HaeIII	GGCC	6 cut(s)	187, 1277, 1487, 2140, 2175, 2194
HapII	CCGG	4 cut(s)	188, 574, 794, 2609
HgaI	GACGC	4 cut(s)	167, 301, 2639, 2678
HhaI	GCGC	1 cut(s)	1192
Hin6I	GCGC	1 cut(s)	1190
HinP1I	GCGC	1 cut(s)	1190
HincII	GTYRAC	3 cut(s)	1150, 1884, 2301
HindII	GTYRAC	3 cut(s)	1150, 1884, 2301
HindIII	AAGCTT	2 cut(s)	718, 843
HpaI	GTTAAC	1 cut(s)	1884
HpaII	CCGG	4 cut(s)	188, 574, 794, 2609
HphI	GGTGA	3 cut(s)	141, 416, 1102
Hpy166II	GTNNAC	9 cut(s)	981, 983, 1150, 1221, 1884, 1985, 2045, 2301, 2639
Hpy8I	GTNNAC	9 cut(s)	981, 983, 1150, 1221, 1884, 1985, 2045, 2301, 2639
Hpy99I	CGWCG	1 cut(s)	2226
HpyCH4III	ACNGT	9 cut(s)	250, 299, 647, 970, 975, 1127, 1243, 1956, 2666
HpyCH4IV	ACGT	1 cut(s)	2488
HpyF3I	CTNAG	8 cut(s)	374, 1467, 1489, 1791, 1930, 2198, 2282, 2390
HpySE526I	ACGT	1 cut(s)	2488
HspAI	GCGC	1 cut(s)	1190
Ksp22I	TGATCA	3 cut(s)	1045, 1107, 1369
KspAI	GTTAAC	1 cut(s)	1884
LmnI	GCTCC	6 cut(s)	737, 802, 1512, 2286, 2361, 2572
Lsp1109I	GCAGC	7 cut(s)	27, 84, 379, 740, 1067, 1070, 1685
LweI	GCATC	7 cut(s)	230, 807, 1315, 1660, 1716, 1916, 2405
MaeI	CTAG	5 cut(s)	24, 183, 335, 728, 1559
MaeII	ACGT	1 cut(s)	2488
MaeIII	GTNAC	7 cut(s)	284, 1375, 1642, 1794, 2201, 2455, 2666
MfeI	CAATTG	1 cut(s)	1867
MflI	RGATCY	4 cut(s)	1079, 1544, 1595, 1888
MhlI	GDGCHC	3 cut(s)	883, 2008, 2569
MlsI	TGGCCA	2 cut(s)	1277, 2175
MluNI	TGGCCA	2 cut(s)	1277, 2175
MlyI	GAGTC	4 cut(s)	917, 1202, 1226, 2082
MmeI	TCCRAC	3 cut(s)	259, 1806, 2252
Mox20I	TGGCCA	2 cut(s)	1277, 2175
Mph1103I	ATGCAT	4 cut(s)	223, 1330, 1731, 2521
MroXI	GAANNNNTTC	2 cut(s)	997, 2617
MscI	TGGCCA	2 cut(s)	1277, 2175
MseI	TTAA	9 cut(s)	86, 455, 504, 746, 935, 1154, 1883, 2588, 2698
MslI	CAYNNNNRTG	1 cut(s)	197
Msp20I	TGGCCA	2 cut(s)	1277, 2175
MspA1I	CMGCKG	3 cut(s)	18, 753, 1356
MspI	CCGG	4 cut(s)	188, 574, 794, 2609
MspR9I	CCNGG	4 cut(s)	801, 990, 2177, 2610
MunI	CAATTG	1 cut(s)	1867
Mva1269I	GAATGC	4 cut(s)	223, 335, 1069, 1879
MvaI	CCWGG	3 cut(s)	801, 990, 2177
MvnI	CGCG	1 cut(s)	1190
NciI	CCSGG	1 cut(s)	2610
NlaIV	GGNNCC	9 cut(s)	798, 928, 1020, 1351, 1651, 1890, 2043, 2357, 2686
NmuCI	GTSAC	2 cut(s)	1794, 2666
NsiI	ATGCAT	4 cut(s)	223, 1330, 1731, 2521
NspI	RCATGY	3 cut(s)	196, 681, 1978
PaeR7I	CTCGAG	1 cut(s)	2131
PagI	TCATGA	1 cut(s)	2626
PceI	AGGCCT	1 cut(s)	2194
PctI	GAATGC	4 cut(s)	223, 335, 1069, 1879
PdmI	GAANNNNTTC	2 cut(s)	997, 2617
PkrI	GCNGC	9 cut(s)	17, 74, 105, 394, 755, 1057, 1060, 1189, 1675
PleI	GAGTC	4 cut(s)	916, 1202, 1225, 2082
PpsI	GAGTC	4 cut(s)	916, 1202, 1225, 2082
Psp6I	CCWGG	3 cut(s)	799, 988, 2175
PspEI	GGTNACC	1 cut(s)	284
PspFI	CCCAGC	1 cut(s)	2071
PspGI	CCWGG	3 cut(s)	799, 988, 2175
PspN4I	GGNNCC	9 cut(s)	798, 928, 1020, 1351, 1651, 1890, 2043, 2357, 2686
PspPI	GGNCC	5 cut(s)	791, 1812, 1982, 2042, 2685
PstI	CTGCAG	2 cut(s)	1413, 1594
PstNI	CAGNNNCTG	1 cut(s)	1598
PsuI	RGATCY	4 cut(s)	1079, 1544, 1595, 1888
PvuII	CAGCTG	2 cut(s)	18, 1356
RsaI	GTAC	4 cut(s)	537, 972, 982, 1132
RsaNI	GTAC	4 cut(s)	536, 971, 981, 1131
RseI	CAYNNNNRTG	1 cut(s)	197
SaqAI	TTAA	9 cut(s)	86, 455, 504, 746, 935, 1154, 1883, 2588, 2698
SatI	GCNGC	9 cut(s)	16, 73, 104, 393, 754, 1056, 1059, 1188, 1674
Sau96I	GGNCC	5 cut(s)	791, 1812, 1982, 2042, 2685
ScaI	AGTACT	1 cut(s)	1132
SchI	GAGTC	4 cut(s)	917, 1202, 1226, 2082
ScrFI	CCNGG	4 cut(s)	801, 990, 2177, 2610
SduI	GDGCHC	3 cut(s)	883, 2008, 2569
SfaNI	GCATC	7 cut(s)	230, 807, 1315, 1660, 1716, 1916, 2405
SfcI	CTRYAG	5 cut(s)	125, 246, 1409, 1590, 2546
Sfr274I	CTCGAG	1 cut(s)	2131
SinI	GGWCC	5 cut(s)	791, 1812, 1982, 2042, 2685
SlaI	CTCGAG	1 cut(s)	2131
SmiMI	CAYNNNNRTG	1 cut(s)	197
SmlI	CTYRAG	6 cut(s)	109, 347, 1023, 1167, 1302, 2131
SmoI	CTYRAG	6 cut(s)	109, 347, 1023, 1167, 1302, 2131
SseBI	AGGCCT	1 cut(s)	2194
SsiI	CCGC	5 cut(s)	103, 751, 1188, 1939, 2415
SspI	AATATT	1 cut(s)	2326
SspMI	CTAG	5 cut(s)	24, 183, 335, 728, 1559
StuI	AGGCCT	1 cut(s)	2194
StyD4I	CCNGG	4 cut(s)	799, 988, 2175, 2608
TaaI	ACNGT	9 cut(s)	250, 299, 647, 970, 975, 1127, 1243, 1956, 2666
TaiI	ACGT	1 cut(s)	2491
TaqI	TCGA	4 cut(s)	1215, 1779, 2132, 2224
TatI	WGTACW	3 cut(s)	535, 980, 1130
TauI	GCSGC	2 cut(s)	106, 1190
Tru1I	TTAA	9 cut(s)	86, 455, 504, 746, 935, 1154, 1883, 2588, 2698
Tru9I	TTAA	9 cut(s)	86, 455, 504, 746, 935, 1154, 1883, 2588, 2698
TseFI	GTSAC	2 cut(s)	1794, 2666
TseI	GCWGC	7 cut(s)	15, 72, 392, 753, 1055, 1058, 1673
Tsp45I	GTSAC	2 cut(s)	1794, 2666
TspGWI	ACGGA	3 cut(s)	993, 1630, 1901
VpaK11BI	GGWCC	5 cut(s)	791, 1812, 1982, 2042, 2685
XagI	CCTNNNNNAGG	1 cut(s)	1539
XapI	RAATTY	6 cut(s)	463, 670, 810, 997, 1658, 2249
XbaI	TCTAGA	1 cut(s)	23
XceI	RCATGY	3 cut(s)	196, 681, 1978
XhoI	CTCGAG	1 cut(s)	2131
XmiI	GTMKAC	1 cut(s)	1220
XmnI	GAANNNNTTC	2 cut(s)	997, 2617
XspI	CTAG	5 cut(s)	24, 183, 335, 728, 1559
ZrmI	AGTACT	1 cut(s)	1132
Zsp2I	ATGCAT	4 cut(s)	223, 1330, 1731, 2521

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.