Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004602

Physical Location & Seq

Genomic Coordinates Reverse (-)

11009904 .. 11012553

Gene Structure 2650 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g08380.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGCAGCAGCTAAAGTTTGTTCGGGAAGAACAGGAGCAAAGAGTACATGAAGCAGTTATGATGACATCAAGAGAGTCTGAGAAGGCACAGAGAAAGTTAGAAGAGAAGTTGAGAGAGACAAGTGAACAGCTTACACACTTGGTTGCTGAAAATACTAATTTGAACAGAGCCCTTCGAGCAAAAGACAAATTGATCGAAGATTTGAATAGACACAAGTCTCAAACTGATGCAGAATTCAGTGCACTAATGGTTAGACTGGATTCCACAGAAAAGGAAAATGCTTTTCTAAGATATGAATTTCACATGCTTGAGAAGGAACTTGAGATCCGAAGTGAGGAGATGGAATACAACCGTCAGTCAGCTGCAGAATCGCATAAACAACATTTGGAGAGTGTGAGGATAATCGCAAAGTTAGAACAAGAATGTCAGAGACTTCATCTCCTTATGCGAAAGCGGCTGCCAGGTCCTACTGCTTTGGTGAATATGAAGAGTGAGGTTCAAATGCTGGGAAGGGATCAGACCGAGATGAGAAGAAGAAAGCAGAATCCCACAAGGGATATGGTTGTAAAAGATGCCAACATGGGAAGTTCTCCTGAAATTTCAAATAAGAAGATGAGTCTCGTGATTGAGCAATTACGAGATTTGGAAGAAGAAAACAAAACTCTTAGAGAAATTTTAACAAAGAAAAACGCCGAACTCCTTTCTTCAAGGACCACATATTCTCGAACAGCTTCCAGATTGTCACAGGCTGAGACTCAGCTTGGAGAGCTTTCTAAATTCCAGAAATCTATGGAGTTGGTACCATATAATGACATTTCTCGATATTCAAGGTTTGACATTGGCAGCGATGATAGCTCGTCCGAATCTTGGGCTAGTGCTCTAATTTCAGAGTTGGAACATTTTAAAAACGAGAGACTTAAAAGTCCACAGGAATGTTCAGACATTAGCTTAATGGATGATTTTGTTGAGATGGAGAAATTGGCAATAGTTTCTGCTGGTAAAGCTCCCAACAATGGGCATCAACATTGTTTTACCGGTAGGGAGCTTGTACCGGTTGAAGTCAATTCCAACAGTGACAAGAGAAAGCACGGTGCGTCAAAAGATTCAAGGTCAGAGAATTCTTTTGACTGGCTTCAGGTCGTTTTAAAAGCAATGTTGGAGCAAAAGAATGTTTCGAAACGAAGTTTAGATGAGCTATTTGAGGACATCAAAATTGCCTTGGGTTACATAAATCCACCAACCGACAATGGACCTCGTAGAAGTGCAGTCTCAAGGCCTAATGCAGAATCTGATCCTGTAGATTCTTTTGGTGGAGCTTTGAGTATTGACACTTCAGTGGAAGATAGTGGCAGCCAACGTTGTCAAGATGCTTCAAGCATGAGGAATAAAATCAATAAGCAATTTGGTTGGCCTGAAGACCGACGAGATAATGGAGTGAAGGGTGCATCTGCGGAGCAGTTGTTGTGTCTGCCTTTAGTTGCTTCTTCAAATGAAACAAATGTTCCACTTCAATTGAATATGGTGCAGGATAAACTGCAAGAAGAAAACAGCAGATTGAAAGATGAACTAAAGAATATGGAAGCTAACCTGCAGTCAGCAACCGAAAAGAATAAAGCGTTGGTCATACAACTTCAGGAATCACAACAAAGAATTGAAAGCTTAATGACAGAAGTGGAGAGTCTGAAAGAATCAGAGGGGGTGATGGTAGACCAGATCGAAAATCAGAAGTCGATTAATGAAGATCTTGATACTCAACTGACTGTTGCCAAAGCAAAGTTGAAACAAGTCTTCCAGAAGTTTTCTTCTTTAGAAGTTGAATTGGAGGATAAACATAACTGTTGTGAAGATTTAGAAGCAACATGTCTTGAGCTTCAGCTCCAGCTACAAAGTGCTGAGAAGGAGACTCTAACGCATGGCATAAACCAAGACGAAAAACAATCCCCATCCGGATGGGAAATCACAACAGCTTCGGTGAAGCTGGCAGAGTGTCAAGAAACCATCCTAAACCTAGGAAAACAGATCAAGGCACTGACTACACCAAGGGAAGCACAACGTTTTGACAAGGTGTTCTCCACAACCAGCACTGCAGCCAACGCCACCAACAGTAACGTGAACAGGCGCTCTTCCCTGCTTGATCAAATGCTAGCTGAGGACAATCCCAAGTCTCCAAAAGATAATGAGACAACGGATGCAGATCTGCAGAAACCATCCCTTTTTCAGTCTGATAGTCACAATGCCTTGTCCACTCCTATCGCTCTGGTACATATGCCGGAAGGGAATCTAGGTTCAAGGGGTAAAGGTGGTAACAGCGCAGTTGGGAGTCTGGCTATTGTGCCGAGTAAGAAACAAGGAGGTTTTGGTTTGCTAAGGAGGCTACTGCTGCGAAGAAAGAAAGGAAGTACCAAGAAACCCCAATCCTTGGCGAAAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04530 map04530

Pfam Domains

Protein Families

FPP

Protein Analysis

811

Amino Acids

91.46

Weight (kDa)

5.88

Isoelectric Point (pI)

58.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19370 AT3G19370 AT3G19370
fragaria_vesca	FvH4_2g05731 FvH4_2g05731 FvH4_2g05731 FvH4_2g05731
malus_domestica	MD05G1084800.v1.1
prunus_persica	Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1
pyrus_communis	pycom05g08380
rosa_chinensis	RchiOBHm_Chr6g0256631
rosa_laevigata	RLG00000014748
rosa_multiflora	Rmu_co8155852.1_g000001 Rmu_sc0007004.1_g000002 Rmu_sc0034019.1_g000001 Rmu_sc0034020.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042850 Rroxscaffold_7G00209150
rosa_rugosa	Rorug05G0565100 Rorug05G0565200 Rorug05G0565300 Rorug05G0565300
rosa_samantha	Rh6AG083000 Rh6BG077600 Rh6CG072200 Rh6DG069400
rosa_wichuraiana	Rw6G007490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	921
Acc36I	ACCTGC	1 cut(s)	1596
Acc65I	GGTACC	1 cut(s)	799
AccB1I	GGYRCC	1 cut(s)	799
AccB7I	CCANNNNNTGG	1 cut(s)	2419
AccI	GTMKAC	1 cut(s)	1707
AccIII	TCCGGA	1 cut(s)	1946
AciI	CCGC	2 cut(s)	454, 1451
AclI	AACGTT	2 cut(s)	1357, 2053
AclWI	GGATC	3 cut(s)	319, 522, 1286
AcsI	RAATTY	6 cut(s)	233, 296, 597, 672, 776, 1117
AcuI	CTGAAG	5 cut(s)	1118, 1317, 1434, 1616, 1856
AfaI	GTAC	5 cut(s)	45, 801, 1050, 2262, 2401
AfiI	CCNNNNNNNGG	5 cut(s)	334, 867, 1013, 1014, 2419
AflIII	ACRYGT	1 cut(s)	1859
AgeI	ACCGGT	2 cut(s)	1034, 1051
AjnI	CCWGG	1 cut(s)	460
AjuI	GAANNNNNNNTTGG	2 cut(s)	1601, 1633
AleI	CACNNNNGTG	1 cut(s)	1334
AloI	GAACNNNNNNTCC	4 cut(s)	309, 341, 2269, 2301
Alw21I	GWGCWC	2 cut(s)	244, 880
Alw44I	GTGCAC	1 cut(s)	240
AlwI	GGATC	3 cut(s)	319, 522, 1286
AlwNI	CAGNNNCTG	1 cut(s)	1289
Aor13HI	TCCGGA	1 cut(s)	1946
AoxI	GGCC	2 cut(s)	1274, 1409
ApaLI	GTGCAC	1 cut(s)	240
ApeKI	GCWGC	8 cut(s)	4, 7, 362, 457, 843, 1350, 2087, 2380
ApoI	RAATTY	6 cut(s)	233, 296, 597, 672, 776, 1117
AseI	ATTAAT	1 cut(s)	1734
AsiGI	ACCGGT	2 cut(s)	1034, 1051
Asp700I	GAANNNNTTC	1 cut(s)	730
Asp718I	GGTACC	1 cut(s)	799
AspA2I	CCTAGG	1 cut(s)	2008
AspLEI	GCGC	2 cut(s)	2121, 2312
AspS9I	GGNCC	3 cut(s)	464, 711, 1250
AsuHPI	GGTGA	3 cut(s)	490, 1711, 1984
AsuII	TTCGAA	1 cut(s)	1175
AsuNHI	GCTAGC	1 cut(s)	2143
AvaII	GGWCC	3 cut(s)	464, 711, 1250
AvrII	CCTAGG	1 cut(s)	2008
BaeGI	GKGCMC	1 cut(s)	244
BanI	GGYRCC	1 cut(s)	799
BanII	GRGCYC	1 cut(s)	172
BarI	GAAGNNNNNNTAC	2 cut(s)	1315, 1347
BauI	CACGAG	1 cut(s)	620
BbsI	GAAGAC	2 cut(s)	1422, 1780
Bbv12I	GWGCWC	2 cut(s)	244, 880
BbvCI	CCTCAGC	1 cut(s)	2148
BbvI	GCAGC	8 cut(s)	16, 19, 349, 444, 855, 1362, 2099, 2367
BccI	CCATC	7 cut(s)	334, 964, 1696, 1944, 1951, 2006, 2215
BciT130I	CCWGG	1 cut(s)	462
BclI	TGATCA	1 cut(s)	2134
BfaI	CTAG	4 cut(s)	873, 2009, 2144, 2282
BfmI	CTRYAG	5 cut(s)	363, 1296, 1589, 2085, 2198
BfoI	RGCGCY	1 cut(s)	2122
BfuAI	ACCTGC	1 cut(s)	1596
BglII	AGATCT	2 cut(s)	1741, 2194
BisI	GCNGC	9 cut(s)	5, 8, 363, 455, 458, 844, 1351, 2088, 2381
BlnI	CCTAGG	1 cut(s)	2008
BlsI	GCNGC	9 cut(s)	6, 9, 364, 456, 459, 845, 1352, 2089, 2382
Bme1390I	CCNGG	1 cut(s)	462
Bme18I	GGWCC	3 cut(s)	464, 711, 1250
BmgT120I	GGNCC	3 cut(s)	464, 711, 1250
BmiI	GGNNCC	1 cut(s)	801
BmrFI	CCNGG	1 cut(s)	462
BmsI	GCATC	6 cut(s)	217, 562, 1027, 1357, 1454, 2179
BmtI	GCTAGC	1 cut(s)	2147
BoxI	GACNNNNGTC	1 cut(s)	214
BpiI	GAAGAC	2 cut(s)	1422, 1780
BpmI	CTGGAG	1 cut(s)	1862
Bpu10I	CCTNAGC	2 cut(s)	2148, 2366
Bpu14I	TTCGAA	1 cut(s)	1175
BpuEI	CTTGAG	4 cut(s)	329, 341, 1255, 1886
BsaBI	GATNNNNATC	1 cut(s)	2193
BsaJI	CCNNGG	4 cut(s)	1218, 2008, 2039, 2418
BsaWI	WCCGGW	3 cut(s)	1034, 1051, 1946
BsaXI	ACNNNNNCTCC	4 cut(s)	423, 453, 1445, 1475
Bsc4I	CCNNNNNNNGG	5 cut(s)	334, 867, 1013, 1014, 2419
Bse118I	RCCGGY	2 cut(s)	1034, 1051
Bse1I	ACTGG	2 cut(s)	261, 1133
Bse3DI	GCAATG	1 cut(s)	1158
Bse8I	GATNNNNATC	1 cut(s)	2193
BseAI	TCCGGA	1 cut(s)	1946
BseBI	CCWGG	1 cut(s)	462
BseDI	CCNNGG	4 cut(s)	1218, 2008, 2039, 2418
BseGI	GGATG	6 cut(s)	961, 1943, 1955, 1998, 2194, 2207
BseJI	GATNNNNATC	1 cut(s)	2193
BseLI	CCNNNNNNNGG	5 cut(s)	334, 867, 1013, 1014, 2419
BseMI	GCAATG	1 cut(s)	1158
BseMII	CTCAG	5 cut(s)	69, 741, 770, 1884, 2139
BseNI	ACTGG	2 cut(s)	261, 1133
BseRI	GAGGAG	1 cut(s)	350
BseSI	GKGCMC	1 cut(s)	244
BseXI	GCAGC	8 cut(s)	16, 19, 349, 444, 855, 1362, 2099, 2367
BseYI	CCCAGC	1 cut(s)	505
BsgI	GTGCAG	2 cut(s)	1284, 1544
BshFI	GGCC	2 cut(s)	1276, 1411
BshNI	GGYRCC	1 cut(s)	799
BshTI	ACCGGT	2 cut(s)	1034, 1051
BsiHKAI	GWGCWC	2 cut(s)	244, 880
BsiSI	CCGG	4 cut(s)	1035, 1052, 1947, 2270
BslI	CCNNNNNNNGG	5 cut(s)	334, 867, 1013, 1014, 2419
BsnI	GGCC	2 cut(s)	1276, 1411
Bsp119I	TTCGAA	1 cut(s)	1175
Bsp1286I	GDGCHC	3 cut(s)	172, 244, 880
Bsp13I	TCCGGA	1 cut(s)	1946
Bsp143I	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
BspACI	CCGC	2 cut(s)	454, 1451
BspANI	GGCC	2 cut(s)	1276, 1411
BspCNI	CTCAG	5 cut(s)	70, 742, 769, 1885, 2140
BspEI	TCCGGA	1 cut(s)	1946
BspLI	GGNNCC	1 cut(s)	801
BspMAI	CTGCAG	4 cut(s)	367, 1593, 2089, 2202
BspMI	ACCTGC	1 cut(s)	1596
BspOI	GCTAGC	1 cut(s)	2147
BspPI	GGATC	3 cut(s)	319, 522, 1286
BspQI	GCTCTTC	1 cut(s)	2128
BspT104I	TTCGAA	1 cut(s)	1175
BspT107I	GGYRCC	1 cut(s)	799
BsrDI	GCAATG	1 cut(s)	1158
BsrFI	RCCGGY	2 cut(s)	1034, 1051
BsrI	ACTGG	2 cut(s)	261, 1133
BssAI	RCCGGY	2 cut(s)	1034, 1051
BssECI	CCNNGG	4 cut(s)	1218, 2008, 2039, 2418
BssMI	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
BssSI	CACGAG	1 cut(s)	620
BssT1I	CCWWGG	4 cut(s)	1218, 2008, 2039, 2418
Bst2BI	CACGAG	1 cut(s)	620
Bst2UI	CCWGG	1 cut(s)	462
Bst4CI	ACNGT	6 cut(s)	353, 1073, 1091, 1762, 1838, 2105
Bst6I	CTCTTC	3 cut(s)	96, 482, 2128
BstBI	TTCGAA	1 cut(s)	1175
BstC8I	GCNNGC	2 cut(s)	1980, 2145
BstDEI	CTNAG	8 cut(s)	78, 287, 665, 750, 756, 1893, 2148, 2366
BstF5I	GGATG	6 cut(s)	961, 1943, 1955, 1998, 2194, 2207
BstH2I	RGCGCY	1 cut(s)	2122
BstHHI	GCGC	2 cut(s)	2121, 2312
BstKTI	GATC	9 cut(s)	195, 327, 517, 1294, 1716, 1744, 2022, 2137, 2197
BstMBI	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
BstMWI	GCNNNNNNNGC	8 cut(s)	176, 454, 766, 852, 1001, 2093, 2371, 2380
BstNI	CCWGG	1 cut(s)	462
BstNSI	RCATGY	2 cut(s)	307, 1863
BstPAI	GACNNNNGTC	1 cut(s)	214
BstSCI	CCNGG	1 cut(s)	460
BstSFI	CTRYAG	5 cut(s)	363, 1296, 1589, 2085, 2198
BstSLI	GKGCMC	1 cut(s)	244
BstV1I	GCAGC	8 cut(s)	16, 19, 349, 444, 855, 1362, 2099, 2367
BstV2I	GAAGAC	2 cut(s)	1422, 1780
BstX2I	RGATCY	3 cut(s)	324, 1741, 2194
BstXI	CCANNNNNNTGG	1 cut(s)	1950
BstYI	RGATCY	3 cut(s)	324, 1741, 2194
BsuRI	GGCC	2 cut(s)	1276, 1411
BtgZI	GCGATG	1 cut(s)	861
BtsCI	GGATG	6 cut(s)	961, 1943, 1955, 1998, 2194, 2207
BtsI	GCAGTG	1 cut(s)	2082
BtsIMutI	CAGTG	5 cut(s)	244, 1078, 1341, 2027, 2082
BveI	ACCTGC	1 cut(s)	1596
Cac8I	GCNNGC	2 cut(s)	1980, 2145
CaiI	CAGNNNCTG	1 cut(s)	1289
CfoI	GCGC	2 cut(s)	2121, 2312
Cfr10I	RCCGGY	2 cut(s)	1034, 1051
Cfr13I	GGNCC	3 cut(s)	464, 711, 1250
CseI	GACGC	1 cut(s)	1083
Csp6I	GTAC	5 cut(s)	44, 800, 1049, 2261, 2400
CspAI	ACCGGT	2 cut(s)	1034, 1051
CspCI	CAANNNNNGTGG	2 cut(s)	1494, 1529
CviAII	CATG	6 cut(s)	47, 304, 580, 1378, 1860, 1913
CviQI	GTAC	5 cut(s)	44, 800, 1049, 2261, 2400
DdeI	CTNAG	8 cut(s)	78, 287, 665, 750, 756, 1893, 2148, 2366
DpnI	GATC	9 cut(s)	194, 326, 516, 1293, 1715, 1743, 2021, 2136, 2196
DpnII	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
DraI	TTTAAA	2 cut(s)	904, 1146
DrdI	GACNNNNNNGTC	1 cut(s)	921
DseDI	GACNNNNNNGTC	1 cut(s)	921
Eam1104I	CTCTTC	3 cut(s)	96, 482, 2128
EarI	CTCTTC	3 cut(s)	96, 482, 2128
Eco130I	CCWWGG	4 cut(s)	1218, 2008, 2039, 2418
Eco147I	AGGCCT	1 cut(s)	1276
Eco24I	GRGCYC	1 cut(s)	172
Eco47I	GGWCC	3 cut(s)	464, 711, 1250
Eco57I	CTGAAG	5 cut(s)	1118, 1317, 1434, 1616, 1856
EcoO109I	RGGNCCY	1 cut(s)	464
EcoRI	GAATTC	2 cut(s)	233, 1117
EcoRII	CCWGG	1 cut(s)	460
EcoT14I	CCWWGG	4 cut(s)	1218, 2008, 2039, 2418
EcoT38I	GRGCYC	1 cut(s)	172
ErhI	CCWWGG	4 cut(s)	1218, 2008, 2039, 2418
FaeI	CATG	6 cut(s)	50, 307, 583, 1381, 1863, 1916
FatI	CATG	6 cut(s)	46, 303, 579, 1377, 1859, 1912
FauNDI	CATATG	1 cut(s)	2265
FbaI	TGATCA	1 cut(s)	2134
FblI	GTMKAC	1 cut(s)	1707
Fnu4HI	GCNGC	9 cut(s)	5, 8, 363, 455, 458, 844, 1351, 2088, 2381
FokI	GGATG	6 cut(s)	968, 1930, 1962, 1985, 2194, 2201
FriOI	GRGCYC	1 cut(s)	172
Fsp4HI	GCNGC	9 cut(s)	5, 8, 363, 455, 458, 844, 1351, 2088, 2381
FspBI	CTAG	4 cut(s)	873, 2009, 2144, 2282
GlaI	GCGC	2 cut(s)	2120, 2311
GluI	GCNGC	9 cut(s)	5, 8, 363, 455, 458, 844, 1351, 2088, 2381
GsaI	CCCAGC	1 cut(s)	509
GsuI	CTGGAG	1 cut(s)	1862
HaeII	RGCGCY	1 cut(s)	2122
HaeIII	GGCC	2 cut(s)	1276, 1411
HapII	CCGG	4 cut(s)	1035, 1052, 1947, 2270
HgaI	GACGC	1 cut(s)	1083
HhaI	GCGC	2 cut(s)	2121, 2312
Hin1II	CATG	6 cut(s)	50, 307, 583, 1381, 1863, 1916
Hin6I	GCGC	2 cut(s)	2119, 2310
HinP1I	GCGC	2 cut(s)	2119, 2310
HindIII	AAGCTT	1 cut(s)	1657
HpaII	CCGG	4 cut(s)	1035, 1052, 1947, 2270
HphI	GGTGA	3 cut(s)	490, 1711, 1984
Hpy166II	GTNNAC	6 cut(s)	125, 242, 926, 1708, 2113, 2244
Hpy8I	GTNNAC	6 cut(s)	125, 242, 926, 1708, 2113, 2244
Hpy99I	CGWCG	1 cut(s)	1425
HpyAV	CCTTC	7 cut(s)	76, 182, 307, 504, 1432, 1891, 2267
HpyCH4III	ACNGT	6 cut(s)	353, 1073, 1091, 1762, 1838, 2105
HpyCH4IV	ACGT	3 cut(s)	1357, 2053, 2109
HpyF10VI	GCNNNNNNNGC	8 cut(s)	176, 454, 766, 852, 1001, 2093, 2371, 2380
HpyF3I	CTNAG	8 cut(s)	78, 287, 665, 750, 756, 1893, 2148, 2366
HpySE526I	ACGT	3 cut(s)	1357, 2053, 2109
Hsp92II	CATG	6 cut(s)	50, 307, 583, 1381, 1863, 1916
HspAI	GCGC	2 cut(s)	2119, 2310
Kpn2I	TCCGGA	1 cut(s)	1946
KpnI	GGTACC	1 cut(s)	803
Ksp22I	TGATCA	1 cut(s)	2134
Kzo9I	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
LguI	GCTCTTC	1 cut(s)	2128
LmnI	GCTCC	7 cut(s)	34, 1009, 1042, 1159, 1313, 1453, 1881
Lsp1109I	GCAGC	8 cut(s)	16, 19, 349, 444, 855, 1362, 2099, 2367
LweI	GCATC	6 cut(s)	217, 562, 1027, 1357, 1454, 2179
MaeI	CTAG	4 cut(s)	873, 2009, 2144, 2282
MaeII	ACGT	3 cut(s)	1357, 2053, 2109
MaeIII	GTNAC	6 cut(s)	741, 1073, 1223, 2105, 2228, 2303
MalI	GATC	9 cut(s)	194, 326, 516, 1293, 1715, 1743, 2021, 2136, 2196
MboI	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
MfeI	CAATTG	1 cut(s)	1511
MflI	RGATCY	3 cut(s)	324, 1741, 2194
MhlI	GDGCHC	3 cut(s)	172, 244, 880
MlyI	GAGTC	6 cut(s)	83, 625, 748, 1687, 1897, 2329
MmeI	TCCRAC	3 cut(s)	873, 1092, 1137
MroI	TCCGGA	1 cut(s)	1946
MroXI	GAANNNNTTC	1 cut(s)	730
MseI	TTAA	7 cut(s)	677, 903, 918, 950, 1145, 1661, 1734
MslI	CAYNNNNRTG	3 cut(s)	931, 1334, 1948
MspA1I	CMGCKG	1 cut(s)	362
MspI	CCGG	4 cut(s)	1035, 1052, 1947, 2270
MspR9I	CCNGG	1 cut(s)	462
MunI	CAATTG	1 cut(s)	1511
MvaI	CCWGG	1 cut(s)	462
MwoI	GCNNNNNNNGC	8 cut(s)	176, 454, 766, 852, 1001, 2093, 2371, 2380
NdeI	CATATG	1 cut(s)	2265
NdeII	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
NheI	GCTAGC	1 cut(s)	2143
NlaIII	CATG	6 cut(s)	50, 307, 583, 1381, 1863, 1916
NlaIV	GGNNCC	1 cut(s)	801
NmeAIII	GCCGAG	1 cut(s)	2361
NmuCI	GTSAC	3 cut(s)	741, 1073, 2228
NspI	RCATGY	2 cut(s)	307, 1863
NspV	TTCGAA	1 cut(s)	1175
OliI	CACNNNNGTG	1 cut(s)	1334
PceI	AGGCCT	1 cut(s)	1276
PciI	ACATGT	1 cut(s)	1859
PciSI	GCTCTTC	1 cut(s)	2128
PdmI	GAANNNNTTC	1 cut(s)	730
PflMI	CCANNNNNTGG	1 cut(s)	2419
PinAI	ACCGGT	2 cut(s)	1034, 1051
PkrI	GCNGC	9 cut(s)	6, 9, 364, 456, 459, 845, 1352, 2089, 2382
PleI	GAGTC	6 cut(s)	82, 624, 748, 1686, 1897, 2328
PpsI	GAGTC	6 cut(s)	82, 624, 748, 1686, 1897, 2328
PpuMI	RGGWCCY	1 cut(s)	464
PscI	ACATGT	1 cut(s)	1859
PshAI	GACNNNNGTC	1 cut(s)	214
PshBI	ATTAAT	1 cut(s)	1734
Psp1406I	AACGTT	2 cut(s)	1357, 2053
Psp5II	RGGWCCY	1 cut(s)	464
Psp6I	CCWGG	1 cut(s)	460
PspFI	CCCAGC	1 cut(s)	505
PspGI	CCWGG	1 cut(s)	460
PspN4I	GGNNCC	1 cut(s)	801
PspPI	GGNCC	3 cut(s)	464, 711, 1250
PspPPI	RGGWCCY	1 cut(s)	464
PstI	CTGCAG	4 cut(s)	367, 1593, 2089, 2202
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	3 cut(s)	324, 1741, 2194
PvuII	CAGCTG	1 cut(s)	362
RsaI	GTAC	5 cut(s)	45, 801, 1050, 2262, 2401
RsaNI	GTAC	5 cut(s)	44, 800, 1049, 2261, 2400
RseI	CAYNNNNRTG	3 cut(s)	931, 1334, 1948
SapI	GCTCTTC	1 cut(s)	2128
SaqAI	TTAA	7 cut(s)	677, 903, 918, 950, 1145, 1661, 1734
SatI	GCNGC	9 cut(s)	5, 8, 363, 455, 458, 844, 1351, 2088, 2381
Sau3AI	GATC	9 cut(s)	192, 324, 514, 1291, 1713, 1741, 2019, 2134, 2194
Sau96I	GGNCC	3 cut(s)	464, 711, 1250
SchI	GAGTC	6 cut(s)	83, 625, 748, 1687, 1897, 2329
ScrFI	CCNGG	1 cut(s)	462
SduI	GDGCHC	3 cut(s)	172, 244, 880
SfaNI	GCATC	6 cut(s)	217, 562, 1027, 1357, 1454, 2179
SfcI	CTRYAG	5 cut(s)	363, 1296, 1589, 2085, 2198
SfuI	TTCGAA	1 cut(s)	1175
SinI	GGWCC	3 cut(s)	464, 711, 1250
SmiMI	CAYNNNNRTG	3 cut(s)	931, 1334, 1948
SmlI	CTYRAG	4 cut(s)	308, 320, 1270, 1865
SmoI	CTYRAG	4 cut(s)	308, 320, 1270, 1865
SseBI	AGGCCT	1 cut(s)	1276
SsiI	CCGC	2 cut(s)	454, 1451
SspMI	CTAG	4 cut(s)	873, 2009, 2144, 2282
StuI	AGGCCT	1 cut(s)	1276
StyD4I	CCNGG	1 cut(s)	460
StyI	CCWWGG	4 cut(s)	1218, 2008, 2039, 2418
TaaI	ACNGT	6 cut(s)	353, 1073, 1091, 1762, 1838, 2105
TaiI	ACGT	3 cut(s)	1360, 2056, 2112
TaqI	TCGA	7 cut(s)	175, 195, 724, 820, 1175, 1716, 1730
TaqII	GACCGA	2 cut(s)	536, 1434
TatI	WGTACW	1 cut(s)	43
TauI	GCSGC	1 cut(s)	457
Tru1I	TTAA	7 cut(s)	677, 903, 918, 950, 1145, 1661, 1734
Tru9I	TTAA	7 cut(s)	677, 903, 918, 950, 1145, 1661, 1734
TscAI	CASTG	5 cut(s)	244, 1078, 1341, 2034, 2089
TseFI	GTSAC	3 cut(s)	741, 1073, 2228
TseI	GCWGC	8 cut(s)	4, 7, 362, 457, 843, 1350, 2087, 2380
Tsp45I	GTSAC	3 cut(s)	741, 1073, 2228
TspDTI	ATGAA	7 cut(s)	63, 309, 425, 500, 1506, 1578, 1752
TspGWI	ACGGA	1 cut(s)	2201
TspRI	CASTG	5 cut(s)	244, 1078, 1341, 2034, 2089
Van91I	CCANNNNNTGG	1 cut(s)	2419
VneI	GTGCAC	1 cut(s)	240
VpaK11BI	GGWCC	3 cut(s)	464, 711, 1250
VspI	ATTAAT	1 cut(s)	1734
XapI	RAATTY	6 cut(s)	233, 296, 597, 672, 776, 1117
XceI	RCATGY	2 cut(s)	307, 1863
XcmI	CCANNNNNNNNNTGG	1 cut(s)	556
XmaJI	CCTAGG	1 cut(s)	2008
XmiI	GTMKAC	1 cut(s)	1707
XmnI	GAANNNNTTC	1 cut(s)	730
XspI	CTAG	4 cut(s)	873, 2009, 2144, 2282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.