Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004602

Physical Location & Seq

Genomic Coordinates Reverse (-)

57110997 .. 57114237

Gene Structure 3241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014748

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2565 bp

ATGGACCACAAGGGTTGGCTTTGGAGGAAGAAGTCTTCGGAGAAGACAATTGTTTCAACTAACAGACTTGCCATTCCTTTAAGAACAATTGAAGAAGAGGTACAAGCATATCCAGCTGAGAAAGGAAATGACGCAGAGAGACCAGGGAAAAATCTAAATGAGAAGTTAGCTTCGGTCCTCCTTGACTCTAATGTTAAAGAAGAAGGCATACCAGGAGATTTGGTACCAAAGCAAGAACTAGATGAAGCTTTGAGGCAGGGAATAGCTGCAAATGAAAGATCAATTCATTCAGATGATGCATTGAAAGAATGCATGGAACAATTAATTTTTGTTCGGGAAGAACAGGAGCAAAGAATACATGATGCTGTTATGATGACGTCAAGAGAGTACGAGAAGTCTCAGAAAAAATTAGAAGCTAAGTTGCGAGAGACAAGTGAACAGGTTACAAACTTAGCTGTTGAAAATACGAATCTGACCAGGGTCCTTCGAGCAAAAGAGAAGTTGATGGAAGATTTACGCAGACAGAAGTCTCAAACAGATGCAGAATTTAGTGCACTGATGGCTAGACTGGATTCCACAGAAAAAGAAAATGCCTTCTTAAGATATGAATTTCACATGCTCGAGAAGGAACTCGAGATTCGTAGTGAGGAGATGGAGTACAACCGTCGGTCTGCTGAAGAATCACACAAACAGCATTTGGAGAGTATGATGAGAATCACAGAGTTGGAGCAAGAATGTCAAAGACTTCATCATCTTCTGCGAAAACGGCTGCCAGGTCCTGTTTCGATGAATATGAAGAATGAAGCTAAAATGATGGGGAGGGATCAGAAAGAGATGAGACGAAGGAAGCTTGATCCTTCTAGAGATATGATCGTAAGAGATGCCAACATGGGAAACTCTCCTGAAATACCAAATAAGAATATGAGTTTCATGATTGAGCAGTTACATAATATGGAAGAAGAAAACAAAGTTCTTAGAGATATTTTAACCAGGAAAAACTCTGAGCTCCTTTCATCGAGGAACATGCATTCTCAAATAGCTTCCAGATTGTCTCAGGCTGAGAAATCTATGGAGCTGGCACGATGCAGTCCTATCCCAAATGATGTTTCTCGATCTTCAAGGTATGACATTTGCAGCGATGATGGGATGAGTTCCTCCGAATCTTGGGCTGGTGCATTACTGTCAGAGTTGGAACATTTTAAAAGTGGGAGGCTTAAAAGTCCACAGCAGCACAAAGAAATGGAGGTTTCAGACATGAGATTAATGGATGATTTTGTTGAGATGGAGAAATTGGCAATAGTTTCTGCGGATATTCCTCCTAAAAATGCCCAAAATCTTCGTTTTAATGGTAAGGACCTGGTACGAGTTGAAGTTCAATCTAGCTTGAGTGACATAAGAAAGTACGGCGAGTCCAGAGATGTAGTACCTGAGAATTCTTTTGACTGGCTTCAGATTGTTTTAAAAGCAATGTTGGAGCAAAAGAATATTTCAAAACGAAGTCTAGATGAGCTATTTGAGGACATCAAAATTGCTTTGGGTTACCTAAAACAGCCAACTGAGCATGAGGCTAGTAAAACAGCAGAATCTCAAGAGAAGTCATTGTGTCTTGCTCTAGTTGCTTCCTCAAATGAAAACAAGGTTGGTGATAAACTACAAGAAGAAAACAGCAGATTAAAAGATGAACTGAAGAATATGGAATCTGCAAAGAATGAAATGGAAGCTAGGCTACATTCAGCAACTGAAAAGAATGAAGCGTTGATGGTACAACTTCAGGAATCACAGCAAAGCCTTGGAACCTTACATACAGAACTGGAGAGTCTGAAAGAAGCAGAGGGGATGATCGAAGACCAGCTCGAAAATCAGAAATCAATTAATGAAGATCTCGATACCCAGCTAACTATTGCCAAAGCAAAGTTAAATGAAGTCTTCCAGAAGTTCTCGTCTTTAGAAGTAGAATTGGAGGATAAACATAACTGCTTTGAAGAACTAGAAGCAACATGTCTTGAGCTCCAACTCCAGCAAGAAAGTGCTGCAAAGACGGAAACTCCGGAGTATGGCATAAGCAAAGAGGAAAAACAGTCCCAACCTGGATGGGAAATCACAACAGCTTCAGTGAAGTTGGCAGAGTGCCAAGAAACCATCCTAAACTTGGGAAAACAGCTGAAGGCACTAGCTACACCAAGAGAAGCAGCACTGTTTGACAAGGTGTTCTCGACCACCAGCGTTGCAGCCAACGCCACCAACAATAACTTGCCCAAGCGCTCTTCCCTACGTGATCGAATGCTAGCTGATGAAGATACCAGAGCAGAGGTTCAGAAGTCTCCAAAGGATAAACAAGCAATGAGGGATGCAGATGCACAGAAACCATCCTTTCTTCACTCTGGTAGTCATAATGCATTGTCCACTCCTAGTGCTCTGGTAAATACGCGGCAAGGTCATTTTGGTTCAAAGCATCTGGCTATTGTGCCGAGTAAGAAACAGGGAGGTTTTGGTTTTCTAAGGAGGCTACTGCTGAGGAGGAAGAAAGGAAGCAGCAAGAAACCCCAAACCTTGGCCAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04530 map04530

Pfam Domains

Protein Families

FPP

Protein Analysis

855

Amino Acids

97.51

Weight (kDa)

5.85

Isoelectric Point (pI)

56.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FPP	PF05911	77 - 531	2.6e-144	Filament-like plant protein, long coiled-coil
FPP	PF05911	521 - 731	4e-55	Filament-like plant protein, long coiled-coil

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004602)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19370 AT3G19370 AT3G19370
fragaria_vesca	FvH4_2g05731 FvH4_2g05731 FvH4_2g05731 FvH4_2g05731
malus_domestica	MD05G1084800.v1.1
prunus_persica	Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1 Prupe.8G129200_v2.0.a1
pyrus_communis	pycom05g08380
rosa_chinensis	RchiOBHm_Chr6g0256631
rosa_laevigata	RLG00000014748
rosa_multiflora	Rmu_co8155852.1_g000001 Rmu_sc0007004.1_g000002 Rmu_sc0034019.1_g000001 Rmu_sc0034020.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042850 Rroxscaffold_7G00209150
rosa_rugosa	Rorug05G0565100 Rorug05G0565200 Rorug05G0565300 Rorug05G0565300
rosa_samantha	Rh6AG083000 Rh6BG077600 Rh6CG072200 Rh6DG069400
rosa_wichuraiana	Rw6G007490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	380
Acc65I	GGTACC	1 cut(s)	223
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	2551
AccII	CGCG	1 cut(s)	2428
AccIII	TCCGGA	1 cut(s)	2047
AciI	CCGC	2 cut(s)	1307, 2428
AclWI	GGATC	2 cut(s)	831, 848
AcoI	YGGCCR	1 cut(s)	2553
AcsI	RAATTY	3 cut(s)	545, 608, 1432
AcuI	CTGAAG	6 cut(s)	696, 1433, 1706, 1754, 2094, 2183
AcyI	GRCGYC	1 cut(s)	377
AfaI	GTAC	8 cut(s)	102, 225, 389, 659, 1362, 1403, 1425, 1764
AfeI	AGCGCT	1 cut(s)	2261
AfiI	CCNNNNNNNGG	4 cut(s)	1164, 2054, 2149, 2551
AflII	CTTAAG	1 cut(s)	598
AflIII	ACRYGT	1 cut(s)	1997
AjnI	CCWGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
AjuI	GAANNNNNNNTTGG	4 cut(s)	1090, 1122, 1623, 1655
Alw21I	GWGCWC	4 cut(s)	556, 1008, 2010, 2416
Alw26I	GTCTC	7 cut(s)	133, 402, 422, 534, 832, 1056, 2325
Alw44I	GTGCAC	1 cut(s)	552
AlwI	GGATC	2 cut(s)	831, 848
AlwNI	CAGNNNCTG	2 cut(s)	779, 1739
Ama87I	CYCGRG	2 cut(s)	620, 632
Aor13HI	TCCGGA	1 cut(s)	2047
Aor51HI	AGCGCT	1 cut(s)	2261
AoxI	GGCC	1 cut(s)	2553
ApaLI	GTGCAC	1 cut(s)	552
ApeKI	GCWGC	8 cut(s)	266, 769, 1134, 1228, 2030, 2189, 2228, 2532
ApoI	RAATTY	3 cut(s)	545, 608, 1432
AseI	ATTAAT	3 cut(s)	323, 1262, 1872
Asp718I	GGTACC	1 cut(s)	223
AspLEI	GCGC	1 cut(s)	2262
AspS9I	GGNCC	5 cut(s)	4, 175, 481, 776, 1354
AsuHPI	GGTGA	1 cut(s)	1655
AsuNHI	GCTAGC	1 cut(s)	2284
AvaI	CYCGRG	2 cut(s)	620, 632
AvaII	GGWCC	5 cut(s)	4, 175, 481, 776, 1354
BaeGI	GKGCMC	1 cut(s)	556
BalI	TGGCCA	1 cut(s)	2555
BanI	GGYRCC	1 cut(s)	223
BanII	GRGCYC	2 cut(s)	1008, 2010
BarI	GAAGNNNNNNTAC	6 cut(s)	84, 116, 192, 224, 1710, 1742
BbsI	GAAGAC	4 cut(s)	27, 50, 1851, 1918
Bbv12I	GWGCWC	4 cut(s)	556, 1008, 2010, 2416
BbvCI	CCTCAGC	1 cut(s)	2513
BbvI	GCAGC	8 cut(s)	253, 756, 1146, 1240, 2017, 2201, 2240, 2544
BceAI	ACGGC	2 cut(s)	782, 1420
BcgI	CGANNNNNNTGC	2 cut(s)	1006, 1040
BciT130I	CCWGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
BcoDI	GTCTC	7 cut(s)	133, 402, 422, 534, 832, 1056, 2325
BfoI	RGCGCY	1 cut(s)	2263
BfrI	CTTAAG	1 cut(s)	598
BglII	AGATCT	1 cut(s)	1879
BisI	GCNGC	9 cut(s)	267, 770, 1135, 1229, 2031, 2190, 2229, 2429, 2533
BlsI	GCNGC	9 cut(s)	268, 771, 1136, 1230, 2032, 2191, 2230, 2430, 2534
Bme1390I	CCNGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
Bme18I	GGWCC	5 cut(s)	4, 175, 481, 776, 1354
BmeT110I	CYCGRG	2 cut(s)	620, 632
BmgT120I	GGNCC	5 cut(s)	4, 175, 481, 776, 1354
BmiI	GGNNCC	3 cut(s)	225, 482, 1795
BmrFI	CCNGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
BmsI	GCATC	8 cut(s)	286, 352, 529, 871, 1073, 2338, 2344, 2461
BmtI	GCTAGC	1 cut(s)	2288
BoxI	GACNNNNGTC	2 cut(s)	479, 526
BpiI	GAAGAC	4 cut(s)	27, 50, 1851, 1918
BpmI	CTGGAG	2 cut(s)	1832, 2000
Bpu10I	CCTNAGC	1 cut(s)	2513
BpuEI	CTTGAG	3 cut(s)	1405, 1572, 2024
BsaAI	YACGTR	1 cut(s)	2273
BsaBI	GATNNNNATC	1 cut(s)	713
BsaHI	GRCGYC	1 cut(s)	377
BsaI	GGTCTC	1 cut(s)	133
BsaJI	CCNNGG	4 cut(s)	143, 477, 1789, 2550
BsaWI	WCCGGW	1 cut(s)	2047
BsaXI	ACNNNNNCTCC	6 cut(s)	207, 237, 641, 671, 2029, 2059
Bsc4I	CCNNNNNNNGG	4 cut(s)	1164, 2054, 2149, 2551
Bse1I	ACTGG	3 cut(s)	573, 1448, 1815
Bse3DI	GCAATG	2 cut(s)	1473, 2346
Bse8I	GATNNNNATC	1 cut(s)	713
BseAI	TCCGGA	1 cut(s)	2047
BseBI	CCWGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
BseDI	CCNNGG	4 cut(s)	143, 477, 1789, 2550
BseGI	GGATG	7 cut(s)	1152, 1273, 1842, 2096, 2139, 2353, 2366
BseJI	GATNNNNATC	1 cut(s)	713
BseLI	CCNNNNNNNGG	4 cut(s)	1164, 2054, 2149, 2551
BseMI	GCAATG	2 cut(s)	1473, 2346
BseMII	CTCAG	8 cut(s)	108, 413, 993, 1050, 1067, 1419, 1548, 2504
BseNI	ACTGG	3 cut(s)	573, 1448, 1815
BseRI	GAGGAG	2 cut(s)	662, 2530
BseSI	GKGCMC	1 cut(s)	556
BseXI	GCAGC	8 cut(s)	253, 756, 1146, 1240, 2017, 2201, 2240, 2544
BseYI	CCCAGC	1 cut(s)	1890
Bsh1236I	CGCG	1 cut(s)	2428
BshFI	GGCC	1 cut(s)	2555
BshNI	GGYRCC	1 cut(s)	223
BsiHKAI	GWGCWC	4 cut(s)	556, 1008, 2010, 2416
BsiHKCI	CYCGRG	2 cut(s)	620, 632
BsiSI	CCGG	1 cut(s)	2048
BslFI	GGGAC	1 cut(s)	2065
BslI	CCNNNNNNNGG	4 cut(s)	1164, 2054, 2149, 2551
BsmAI	GTCTC	7 cut(s)	133, 402, 422, 534, 832, 1056, 2325
BsmBI	CGTCTC	1 cut(s)	832
BsmFI	GGGAC	1 cut(s)	2065
BsmI	GAATGC	3 cut(s)	314, 1027, 2286
BsnI	GGCC	1 cut(s)	2555
Bso31I	GGTCTC	1 cut(s)	133
BsoBI	CYCGRG	2 cut(s)	620, 632
Bsp1286I	GDGCHC	4 cut(s)	556, 1008, 2010, 2416
Bsp13I	TCCGGA	1 cut(s)	2047
Bsp143I	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
BspACI	CCGC	2 cut(s)	1307, 2428
BspANI	GGCC	1 cut(s)	2555
BspCNI	CTCAG	8 cut(s)	109, 412, 994, 1051, 1066, 1420, 1549, 2505
BspEI	TCCGGA	1 cut(s)	2047
BspFNI	CGCG	1 cut(s)	2428
BspHI	TCATGA	1 cut(s)	930
BspLI	GGNNCC	3 cut(s)	225, 482, 1795
BspOI	GCTAGC	1 cut(s)	2288
BspPI	GGATC	2 cut(s)	831, 848
BspQI	GCTCTTC	1 cut(s)	2269
BspT107I	GGYRCC	1 cut(s)	223
BspTI	CTTAAG	1 cut(s)	598
BspTNI	GGTCTC	1 cut(s)	133
BsrDI	GCAATG	2 cut(s)	1473, 2346
BsrI	ACTGG	3 cut(s)	573, 1448, 1815
BssECI	CCNNGG	4 cut(s)	143, 477, 1789, 2550
BssMI	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
BssNI	GRCGYC	1 cut(s)	377
BssT1I	CCWWGG	2 cut(s)	1789, 2550
Bst2UI	CCWGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
Bst4CI	ACNGT	4 cut(s)	665, 1182, 2079, 2196
Bst6I	CTCTTC	2 cut(s)	90, 2269
BstACI	GRCGYC	1 cut(s)	377
BstAFI	CTTAAG	1 cut(s)	598
BstBAI	YACGTR	1 cut(s)	2273
BstC8I	GCNNGC	2 cut(s)	1077, 2286
BstEII	GGTNACC	1 cut(s)	1538
BstF5I	GGATG	7 cut(s)	1152, 1273, 1842, 2096, 2139, 2353, 2366
BstFNI	CGCG	1 cut(s)	2428
BstH2I	RGCGCY	1 cut(s)	2263
BstHHI	GCGC	1 cut(s)	2262
BstKTI	GATC	8 cut(s)	281, 826, 856, 873, 1115, 1842, 1882, 2278
BstMAI	GTCTC	7 cut(s)	133, 402, 422, 534, 832, 1056, 2325
BstMBI	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 560, 766, 1558, 1616, 2234
BstNI	CCWGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
BstNSI	RCATGY	3 cut(s)	619, 1027, 2001
BstPAI	GACNNNNGTC	2 cut(s)	479, 526
BstPI	GGTNACC	1 cut(s)	1538
BstSCI	CCNGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
BstSLI	GKGCMC	1 cut(s)	556
BstUI	CGCG	1 cut(s)	2428
BstV1I	GCAGC	8 cut(s)	253, 756, 1146, 1240, 2017, 2201, 2240, 2544
BstV2I	GAAGAC	4 cut(s)	27, 50, 1851, 1918
BstX2I	RGATCY	1 cut(s)	1879
BstYI	RGATCY	1 cut(s)	1879
BsuRI	GGCC	1 cut(s)	2555
BtgZI	GCGATG	1 cut(s)	1152
BtsCI	GGATG	7 cut(s)	1152, 1273, 1842, 2096, 2139, 2353, 2366
BtsIMutI	CAGTG	3 cut(s)	554, 2118, 2192
Cac8I	GCNNGC	2 cut(s)	1077, 2286
CaiI	CAGNNNCTG	2 cut(s)	779, 1739
CciI	TCATGA	1 cut(s)	930
CfoI	GCGC	1 cut(s)	2262
Cfr13I	GGNCC	5 cut(s)	4, 175, 481, 776, 1354
CseI	GACGC	1 cut(s)	140
CsiI	ACCWGGT	1 cut(s)	1356
Csp6I	GTAC	8 cut(s)	101, 224, 388, 658, 1361, 1402, 1424, 1763
CspCI	CAANNNNNGTGG	3 cut(s)	31, 2206, 2241
CviAII	CATG	9 cut(s)	313, 359, 616, 889, 931, 1024, 1255, 1562, 1998
CviQI	GTAC	8 cut(s)	101, 224, 388, 658, 1361, 1402, 1424, 1763
DpnI	GATC	8 cut(s)	280, 825, 855, 872, 1114, 1841, 1881, 2277
DpnII	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
DraI	TTTAAA	2 cut(s)	1201, 1461
EaeI	YGGCCR	1 cut(s)	2553
Eam1104I	CTCTTC	2 cut(s)	90, 2269
EarI	CTCTTC	2 cut(s)	90, 2269
Ecl136II	GAGCTC	2 cut(s)	1006, 2008
Eco130I	CCWWGG	2 cut(s)	1789, 2550
Eco24I	GRGCYC	2 cut(s)	1008, 2010
Eco31I	GGTCTC	1 cut(s)	133
Eco47I	GGWCC	5 cut(s)	4, 175, 481, 776, 1354
Eco47III	AGCGCT	1 cut(s)	2261
Eco53kI	GAGCTC	2 cut(s)	1006, 2008
Eco57I	CTGAAG	6 cut(s)	696, 1433, 1706, 1754, 2094, 2183
Eco88I	CYCGRG	2 cut(s)	620, 632
Eco91I	GGTNACC	1 cut(s)	1538
EcoICRI	GAGCTC	2 cut(s)	1006, 2008
EcoO109I	RGGNCCY	3 cut(s)	481, 776, 1354
EcoO65I	GGTNACC	1 cut(s)	1538
EcoRI	GAATTC	1 cut(s)	1432
EcoRII	CCWGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
EcoT14I	CCWWGG	2 cut(s)	1789, 2550
EcoT22I	ATGCAT	4 cut(s)	301, 314, 1029, 2398
EcoT38I	GRGCYC	2 cut(s)	1008, 2010
ErhI	CCWWGG	2 cut(s)	1789, 2550
Esp3I	CGTCTC	1 cut(s)	832
FaeI	CATG	9 cut(s)	316, 362, 619, 892, 934, 1027, 1258, 1565, 2001
FaqI	GGGAC	1 cut(s)	2065
FatI	CATG	9 cut(s)	312, 358, 615, 888, 930, 1023, 1254, 1561, 1997
Fnu4HI	GCNGC	9 cut(s)	267, 770, 1135, 1229, 2031, 2190, 2229, 2429, 2533
FokI	GGATG	7 cut(s)	1159, 1280, 1849, 2103, 2126, 2353, 2360
FriOI	GRGCYC	2 cut(s)	1008, 2010
Fsp4HI	GCNGC	9 cut(s)	267, 770, 1135, 1229, 2031, 2190, 2229, 2429, 2533
GlaI	GCGC	1 cut(s)	2261
GluI	GCNGC	9 cut(s)	267, 770, 1135, 1229, 2031, 2190, 2229, 2429, 2533
GsaI	CCCAGC	1 cut(s)	1894
GsuI	CTGGAG	2 cut(s)	1832, 2000
HaeII	RGCGCY	1 cut(s)	2263
HaeIII	GGCC	1 cut(s)	2555
HapII	CCGG	1 cut(s)	2048
HgaI	GACGC	1 cut(s)	140
HhaI	GCGC	1 cut(s)	2262
Hin1I	GRCGYC	1 cut(s)	377
Hin1II	CATG	9 cut(s)	316, 362, 619, 892, 934, 1027, 1258, 1565, 2001
Hin6I	GCGC	1 cut(s)	2260
HinP1I	GCGC	1 cut(s)	2260
HindIII	AAGCTT	2 cut(s)	246, 848
HpaII	CCGG	1 cut(s)	2048
HphI	GGTGA	1 cut(s)	1655
Hpy166II	GTNNAC	4 cut(s)	437, 554, 1223, 2403
Hpy8I	GTNNAC	4 cut(s)	437, 554, 1223, 2403
Hpy99I	CGWCG	1 cut(s)	669
HpyAV	CCTTC	7 cut(s)	197, 494, 604, 619, 837, 867, 2158
HpyCH4III	ACNGT	4 cut(s)	665, 1182, 2079, 2196
HpyCH4IV	ACGT	2 cut(s)	377, 2272
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 560, 766, 1558, 1616, 2234
HpySE526I	ACGT	2 cut(s)	377, 2272
Hsp92I	GRCGYC	1 cut(s)	377
Hsp92II	CATG	9 cut(s)	316, 362, 619, 892, 934, 1027, 1258, 1565, 2001
HspAI	GCGC	1 cut(s)	2260
Kpn2I	TCCGGA	1 cut(s)	2047
KpnI	GGTACC	1 cut(s)	227
Kzo9I	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
LguI	GCTCTTC	1 cut(s)	2269
LmnI	GCTCC	6 cut(s)	346, 727, 1011, 1072, 1474, 2013
Lsp1109I	GCAGC	8 cut(s)	253, 756, 1146, 1240, 2017, 2201, 2240, 2544
LweI	GCATC	8 cut(s)	286, 352, 529, 871, 1073, 2338, 2344, 2461
MabI	ACCWGGT	1 cut(s)	1356
MaeII	ACGT	2 cut(s)	377, 2272
MaeIII	GTNAC	4 cut(s)	442, 942, 1388, 1538
MalI	GATC	8 cut(s)	280, 825, 855, 872, 1114, 1841, 1881, 2277
MboI	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
MfeI	CAATTG	2 cut(s)	48, 87
MflI	RGATCY	1 cut(s)	1879
MhlI	GDGCHC	4 cut(s)	556, 1008, 2010, 2416
MlsI	TGGCCA	1 cut(s)	2555
MluNI	TGGCCA	1 cut(s)	2555
MlyI	GAGTC	3 cut(s)	179, 1418, 1825
MmeI	TCCRAC	4 cut(s)	705, 1170, 1452, 2035
Mox20I	TGGCCA	1 cut(s)	2555
Mph1103I	ATGCAT	4 cut(s)	301, 314, 1029, 2398
MroI	TCCGGA	1 cut(s)	2047
MscI	TGGCCA	1 cut(s)	2555
MslI	CAYNNNNRTG	1 cut(s)	291
Msp20I	TGGCCA	1 cut(s)	2555
MspA1I	CMGCKG	2 cut(s)	116, 2161
MspCI	CTTAAG	1 cut(s)	598
MspI	CCGG	1 cut(s)	2048
MspR9I	CCNGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
MunI	CAATTG	2 cut(s)	48, 87
Mva1269I	GAATGC	3 cut(s)	314, 1027, 2286
MvaI	CCWGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
MvnI	CGCG	1 cut(s)	2428
MwoI	GCNNNNNNNGC	6 cut(s)	113, 560, 766, 1558, 1616, 2234
NdeII	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
NheI	GCTAGC	1 cut(s)	2284
NlaIII	CATG	9 cut(s)	316, 362, 619, 892, 934, 1027, 1258, 1565, 2001
NlaIV	GGNNCC	3 cut(s)	225, 482, 1795
NmeAIII	GCCGAG	1 cut(s)	2493
NmuCI	GTSAC	1 cut(s)	1388
NsiI	ATGCAT	4 cut(s)	301, 314, 1029, 2398
NspI	RCATGY	3 cut(s)	619, 1027, 2001
PaeR7I	CTCGAG	2 cut(s)	620, 632
PagI	TCATGA	1 cut(s)	930
PciI	ACATGT	1 cut(s)	1997
PciSI	GCTCTTC	1 cut(s)	2269
PctI	GAATGC	3 cut(s)	314, 1027, 2286
PfeI	GAWTC	9 cut(s)	469, 572, 637, 680, 714, 1160, 1583, 1697, 1775
PflMI	CCANNNNNTGG	1 cut(s)	2551
PkrI	GCNGC	9 cut(s)	268, 771, 1136, 1230, 2032, 2191, 2230, 2430, 2534
PleI	GAGTC	3 cut(s)	179, 1417, 1824
PpsI	GAGTC	3 cut(s)	179, 1417, 1824
Ppu21I	YACGTR	1 cut(s)	2273
PpuMI	RGGWCCY	3 cut(s)	481, 776, 1354
PscI	ACATGT	1 cut(s)	1997
PshAI	GACNNNNGTC	2 cut(s)	479, 526
PshBI	ATTAAT	3 cut(s)	323, 1262, 1872
Psp124BI	GAGCTC	2 cut(s)	1008, 2010
Psp5II	RGGWCCY	3 cut(s)	481, 776, 1354
Psp6I	CCWGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
PspEI	GGTNACC	1 cut(s)	1538
PspFI	CCCAGC	1 cut(s)	1890
PspGI	CCWGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
PspN4I	GGNNCC	3 cut(s)	225, 482, 1795
PspPI	GGNCC	5 cut(s)	4, 175, 481, 776, 1354
PspPPI	RGGWCCY	3 cut(s)	481, 776, 1354
PsrI	GAACNNNNNNTAC	2 cut(s)	1786, 1818
PstNI	CAGNNNCTG	2 cut(s)	779, 1739
PsuI	RGATCY	1 cut(s)	1879
PvuII	CAGCTG	2 cut(s)	116, 2161
RsaI	GTAC	8 cut(s)	102, 225, 389, 659, 1362, 1403, 1425, 1764
RsaNI	GTAC	8 cut(s)	101, 224, 388, 658, 1361, 1402, 1424, 1763
RseI	CAYNNNNRTG	1 cut(s)	291
SacI	GAGCTC	2 cut(s)	1008, 2010
SapI	GCTCTTC	1 cut(s)	2269
SatI	GCNGC	9 cut(s)	267, 770, 1135, 1229, 2031, 2190, 2229, 2429, 2533
Sau3AI	GATC	8 cut(s)	278, 823, 853, 870, 1112, 1839, 1879, 2275
Sau96I	GGNCC	5 cut(s)	4, 175, 481, 776, 1354
SchI	GAGTC	3 cut(s)	179, 1418, 1825
ScrFI	CCNGG	7 cut(s)	144, 213, 478, 774, 991, 1358, 2088
SduI	GDGCHC	4 cut(s)	556, 1008, 2010, 2416
SexAI	ACCWGGT	1 cut(s)	1356
SfaNI	GCATC	8 cut(s)	286, 352, 529, 871, 1073, 2338, 2344, 2461
Sfr274I	CTCGAG	2 cut(s)	620, 632
SinI	GGWCC	5 cut(s)	4, 175, 481, 776, 1354
SlaI	CTCGAG	2 cut(s)	620, 632
SmiMI	CAYNNNNRTG	1 cut(s)	291
SmlI	CTYRAG	6 cut(s)	598, 620, 632, 1384, 1587, 2003
SmoI	CTYRAG	6 cut(s)	598, 620, 632, 1384, 1587, 2003
SsiI	CCGC	2 cut(s)	1307, 2428
SspI	AATATT	1 cut(s)	1486
SstI	GAGCTC	2 cut(s)	1008, 2010
StyD4I	CCNGG	7 cut(s)	142, 211, 476, 772, 989, 1356, 2086
StyI	CCWWGG	2 cut(s)	1789, 2550
TaaI	ACNGT	4 cut(s)	665, 1182, 2079, 2196
TaiI	ACGT	2 cut(s)	380, 2275
TaqII	GACCGA	2 cut(s)	163, 657
TatI	WGTACW	1 cut(s)	657
TauI	GCSGC	1 cut(s)	2431
TfiI	GAWTC	9 cut(s)	469, 572, 637, 680, 714, 1160, 1583, 1697, 1775
TscAI	CASTG	3 cut(s)	561, 2118, 2199
TseFI	GTSAC	1 cut(s)	1388
TseI	GCWGC	8 cut(s)	266, 769, 1134, 1228, 2030, 2189, 2228, 2532
Tsp45I	GTSAC	1 cut(s)	1388
TspGWI	ACGGA	1 cut(s)	2054
TspRI	CASTG	3 cut(s)	561, 2118, 2199
Van91I	CCANNNNNTGG	1 cut(s)	2551
Vha464I	CTTAAG	1 cut(s)	598
VneI	GTGCAC	1 cut(s)	552
VpaK11BI	GGWCC	5 cut(s)	4, 175, 481, 776, 1354
VspI	ATTAAT	3 cut(s)	323, 1262, 1872
XapI	RAATTY	3 cut(s)	545, 608, 1432
XbaI	TCTAGA	2 cut(s)	860, 1501
XceI	RCATGY	3 cut(s)	619, 1027, 2001
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2146
XhoI	CTCGAG	2 cut(s)	620, 632
ZraI	GACGTC	1 cut(s)	378
Zsp2I	ATGCAT	4 cut(s)	301, 314, 1029, 2398

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.