pycom05g08480

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0007482
Physical Location & Seq
Forward (+)
11078792 .. 11083659
4868 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3873 bp
ATGAGATATACTCTGATTCCACCTGAGCTTTACAAACAGTGCTTTTCACCCATTACGGTAGTATCCTCTCCTTGTTCTTCCACATGCAAGAAATCTGAGCAATATTTGTTCACCATCTTCTTGGACCTTACGTTGGTATCATCACCATGTTCTTGCACATTACGACATGCCTTTGCTAATGCTGTTTTTCATAAACTTGTGCAAACTTGGTTAGCGGGTAAAATGGTGTTGAACCGAAGAAGAATGGGAAAAAGGAGAAAGATGAATAGGAGGGCACCAAGTATAAAGAGGAGAATGAATGTCTGGAGGAGAAAAAGAAAGGGGAAGACACAAACTTATAACCTGATGAATAGATCTTTGCCCGACGAACTACTTCGTTGGGCAACTCTTAGGAAAGGGTCGAGCAAATTCCATGCCGTAGAGATGCCTAACAGAGTTCTTTGTCGGGTAAGTTTACCCTACACGACGAATGTTTTCCCGACAACCTGTTTCTTAACCTACGAAATGTGTTCATTGCTTAAATGCTTTCATATCCGTTGGACAAATACATTTCAATTGGTCTGTCGGGTAAGATTTAGTAGGGAAAGAGAATGGGAGTTAGGAGAGTTTTGGGTTGTGGGGGGGGGGGGGGGGGGGGGGAGGGTGGTGGTGGTGGTTGGTTTGATTTGCATTCATTTGAACTTCCCAAACCAAAAGTCTCGTTGTGATGCATCATTTTCTCTGTGTCGTGTTCTTGAAAACGAGCACTCAGTTGGAGTATTTAATCAGCAATTTATATTGGCAGACATTTTTGGTTCAATTTTTGTAACCAAGTTTCAGAACGGAAGCACAAAACAGAATCCAAATGAATCAAAGGACTTTATTGTAGCAATGTATTTTGCAACCAATGCCACATGCATTCTACCGACCTCACAGAAGGGAAAAAATAATTTTCTTTTTCTTTTTCCCCAAATTGTTCACAAAGTCAGTCTCAATTGTTACCATAGTATTATTGACAACATATCTCACGCGCTTATAAAACTGGGTTATACTCAAGTGAGTTTCACCATTAACAACATCAATTCTCGATGTGAGATTCATTTTTACAGACGGGTTTACATAAATCTCACTAATTACTATGAATATTGGTATCTAAATTACGAAAATGAGGATTCGAACTTAAATAGTGTTCAAGCTACTTTTTGGCATGCCAATTTGTTGGATAATTCCTTAATTGAAGTTTTAAACATTCCAAATGCTTTGGGTAAAACTTTGCATGCATGGGTCTCCAATTTTATTATTGATAGGAATTGGATATGTCCTGCCTCTCTCCATGATAGTTTACATCTTATTTGGGGTCAAATTTGTTCTATTTGTTTGCCTAAGACTACTGAAATTGATGATACTTTGATTTGGACTGATTCTTCTGATGCAAGCAACCTTTGGTGGTTTGGGACTGTTGGGTTTGGAATTCTTGTTTTCGTCCTAGAAATTCTCTTTTTCTATGGAAATTCATGCATGGGAAAATTGTTACAGATTCTTTATTACAAGATAGAGGTTTTGCTCTTCCCTCCATTTGTTTTTTTAATGTTCTTTCTCACCTCTACCTTTGATGATGTTATGACCTTCTTCACTTATCCTATTTGTAAAGTGGAGCCTATTTATATTGTTTATGGACAACACGTAATAAGCTTCGCTTTGACGATATTTGACCTTCCATTACTGCTATTGTTTGCTCAATTAATTTTCAACTCCTTGAAATTGATTCTCTTCGCGTTATTGGTTTGTCTGGTCGTCCTGCCAAGTGACCTCGTGTTTCCTTGGCGTTTGAGAGTTCATTTGTTGAATTGTAGAGCGTTGCTCTCTTCTATGTGCATAAGAGTTACACATATTTTTCTGGACCATCCTGGGGTTTATTGGTGGGACTCTTGTCCTCCTTGTGCTATTGCTGCGTATCATCATAATCTTTCTCTTCGCCTCGATTATCGATTTTGTTACGATGGCAGTTTTCTACTTCTTGTTAGGGTTTGGCTTCAAAAGTTGTTTTTAGCGGGTATTGACCTAGTTCCCCTGCTTGTATTACTTTTCCGTTTTTTCGTCTCAATAAAATCTAGTAGAGAGGGGACGGGCAGGGGGTTTTTGGGTGCAACAGTCCTTTCTCAGTTGGGAGAGGGTTCATGCCTCGCACGTGATTCCCATGTCTACAATTCTTGTAGTGATGTTATAATCTTATACTACAAAACTCAAGAGATTGCTAAAAGCAAGTTTGTACCAAAATATGGGATCCATTTGCACATGGTTCCTAGATTTGAATATCAACAATCGCGGCAGAGAAAGAGCTATAACTATAAATTAGCCCAAAGGAGACTAGAGCTAGTTAGGTGCAAAGCCAAAAAAATGGATTCTCAAGCCGAACCCAAGCTTGAAATTTTCTTTTTTCCTTACATACTTGGTGGTCACTTGATCCCCATGATAGACCTAGCCAGACTCTTTGCTTCTCATGGCGTGAAGGCCTCCATTGTCACAACCCCTCACAATGTCATCCTCTTCCAAAACCCCATCCTCAGAGACCAACAACTAGGCTATGATATCGGCTTCCTCACCTTAAATTTCCCGGCTGAAGAGTTTGGTCTCCCGAACGGTTGCGAAAACGAACTCACAACCACTAATGGAGACATGTTCATCAAACTCTTCATGGCTGCCATGAAGCTCCAAGACCCTCTCGGGAAGCTCCTTAGCCAGACCCGACCGGACTGTCTTATCTCGGACAGGCTTTATCCTTGGACTGCAGATGTCACTGACGGACTTGGAATCCCTAGGGTTGTGTTTGATGGGAGTGGCAGCTTCTCTCACTGTGTGGAGGAAAGTCTCAGACGGTATGCTCCACATGAGAAAGTTGTGTCCGAAACTGAGGCTTTTCTCGTGCCCGGCCTACCCAACCAAATCGAGCTCAAAAGGTCAATGCTGCCGGATTACGTCAAAGCCGAAAATGTGTTCACTCATTTTCTCAATGAGGCTCTAGAGTGTGAGATTAAAAGCTATGGGATTGTGGTGAACAGCTTCTACGAGCTAGAACAAGCTTATGCTGATTACTTTCAGAAGGATATGAAGAGGAAAATATGGCACATAGGGCCGGTCTCAATGTACAACCGGACCAACATCGACAAGGTCGAAAGAGGCATCAAAACCTCCATTGATGAGCATAGTTGTTTAAGTTGGCTTGATTCAAGAGAACCCAACTCAGTTCTTTACATAAGCTTTGGAAGCATGCCAAGAATCACTTCAGCTCAGCTTTTGGAAATTGCTCATGGGCTTGAAGCTTCCAACCACCCTTTCATTTGGGTGATTGGGAGGATTTTAGACTACTCATCAAAAGAGAAGCAACAAGTGGAAAGTGTTGTGCTTCCTGTGGGATTCGAAGAAAGGATTACGAAATCGAAAAGAGGGCTTATGATAAGAGGCTGGGCTCCTCAGCTTTTGATTTTAGAACACCCAGCTGTTGGTGCTTATATGAACCATTGTGGGTGGAACTCCATCATTGAAGGTGTAACAGCTGGTGTGCCAATGATCACATGGCCTTTCTCCTCAGAGCAGTTCTACAATGAGAGGTTCATTCTCAATGTCATAAGGGTTGGGATTTCAATGGGGAATGAGGACTGGGTTCCACTGAACGAGCTGCCTAGGGTGACCATAAAGAGGGACAAGGTTGCCCATGTTGTGGACAGACTAATGGGATGTGGAGAAGATGAAGTGGTTGACATGAGAAAGAGAGCAGAAGAGTTCAGAGACAAAGCCATGAAAGCTTTTGAAAAAGGTGGCTCTTCTCATTCCAATGTTCATGCTTTCATTGCCGAGCTCAAGTCTTGCCGGAAAATTAGTCAAAATGGTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

1291

Amino Acids

148.27

Weight (kDa)

8.87

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 1069 - 1196 7.7e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 339, 1016, 2204
AasI GACNNNNNNGTC 1 cut(s) 2733
AccB1I GGYRCC 1 cut(s) 274
AccB7I CCANNNNNTGG 3 cut(s) 2258, 3479, 3697
AccI GTMKAC 1 cut(s) 2181
AccII CGCG 3 cut(s) 1010, 1754, 2305
AciI CCGC 3 cut(s) 215, 2030, 2305
AclWI GGATC 3 cut(s) 2257, 2270, 2437
AcsI RAATTY 7 cut(s) 407, 1341, 1449, 1470, 1489, 2406, 2587
AcuI CTGAAG 2 cut(s) 2619, 3246
AcvI CACGTG 1 cut(s) 2168
AdeI CACNNNGTG 1 cut(s) 2836
AfaI GTAC 2 cut(s) 2250, 3125
AfiI CCNNNNNNNGG 6 cut(s) 133, 1888, 2258, 3479, 3675, 3697
AflIII ACRYGT 2 cut(s) 1660, 2655
AjnI CCWGG 1 cut(s) 1885
AjuI GAANNNNNNNTTGG 4 cut(s) 3244, 3276, 3296, 3328
Alw21I GWGCWC 3 cut(s) 747, 2931, 3837
AlwI GGATC 3 cut(s) 2257, 2270, 2437
Ama87I CYCGRG 1 cut(s) 2702
AoxI GGCC 4 cut(s) 2490, 2908, 3110, 3554
ApeKI GCWGC 5 cut(s) 1928, 2678, 2820, 2944, 3655
ApoI RAATTY 7 cut(s) 407, 1341, 1449, 1470, 1489, 2406, 2587
ArsI GACNNNNNNTTYG 2 cut(s) 680, 712
AseI ATTAAT 1 cut(s) 1721
Asp700I GAANNNNTTC 4 cut(s) 372, 473, 3038, 3259
AspA2I CCTAGG 2 cut(s) 2795, 3659
AspLEI GCGC 1 cut(s) 1012
AspS9I GGNCC 4 cut(s) 124, 1879, 3110, 3132
AsuC2I CCSGG 2 cut(s) 2594, 2907
AsuHPI GGTGA 9 cut(s) 39, 103, 135, 1036, 1570, 2572, 3043, 3334, 3676
AsuII TTCGAA 2 cut(s) 1154, 3396
AvaI CYCGRG 1 cut(s) 2702
AvaII GGWCC 3 cut(s) 124, 1879, 3132
AvrII CCTAGG 2 cut(s) 2795, 3659
BaeGI GKGCMC 2 cut(s) 277, 2907
BaeI ACNNNNGTAYC 4 cut(s) 45, 78, 120, 153
BamHI GGATCC 1 cut(s) 2262
BanI GGYRCC 1 cut(s) 274
BanII GRGCYC 3 cut(s) 2931, 3448, 3837
BauI CACGAG 2 cut(s) 1790, 2900
BbrPI CACGTG 1 cut(s) 2168
BbsI GAAGAC 1 cut(s) 332
Bbv12I GWGCWC 3 cut(s) 747, 2931, 3837
BbvCI CCTCAGC 1 cut(s) 3450
BbvI GCAGC 5 cut(s) 1915, 2665, 2832, 2931, 3642
BccI CCATC 6 cut(s) 122, 1890, 1973, 2546, 2804, 3521
BceAI ACGGC 1 cut(s) 401
BciT130I CCWGG 1 cut(s) 1887
BciVI GTATCC 1 cut(s) 73
BclI TGATCA 1 cut(s) 3546
BcnI CCSGG 2 cut(s) 2594, 2907
BfmI CTRYAG 1 cut(s) 2766
BfuI GTATCC 1 cut(s) 73
BglII AGATCT 1 cut(s) 353
BisI GCNGC 6 cut(s) 1929, 2306, 2679, 2821, 2945, 3656
BlnI CCTAGG 2 cut(s) 2795, 3659
BlpI GCTNAGC 1 cut(s) 3267
BlsI GCNGC 6 cut(s) 1930, 2307, 2680, 2822, 2946, 3657
Bme1390I CCNGG 3 cut(s) 1887, 2594, 2907
Bme18I GGWCC 3 cut(s) 124, 1879, 3132
BmeT110I CYCGRG 1 cut(s) 2702
BmgT120I GGNCC 4 cut(s) 124, 1879, 3110, 3132
BmiI GGNNCC 6 cut(s) 276, 1635, 2264, 2280, 3447, 3642
BmrFI CCNGG 3 cut(s) 1887, 2594, 2907
BmrI ACTGGG 2 cut(s) 1031, 3646
BmsI GCATC 5 cut(s) 414, 697, 719, 1399, 3168
BmuI ACTGGG 2 cut(s) 1031, 3646
BoxI GACNNNNGTC 1 cut(s) 1908
BpiI GAAGAC 1 cut(s) 332
BplI GAGNNNNNCTC 3 cut(s) 27, 1824, 1856
BpmI CTGGAG 1 cut(s) 325
Bpu10I CCTNAGC 3 cut(s) 24, 2714, 3450
Bpu1102I GCTNAGC 1 cut(s) 3267
Bpu14I TTCGAA 2 cut(s) 1154, 3396
BpuEI CTTGAG 4 cut(s) 1017, 2208, 2370, 3821
BpuMI CCSGG 2 cut(s) 2594, 2907
Bsa29I ATCGAT 1 cut(s) 1966
BsaAI YACGTR 2 cut(s) 1663, 2168
BsaI GGTCTC 4 cut(s) 1270, 2541, 2615, 3121
BsaJI CCNNGG 5 cut(s) 1799, 1886, 2759, 2795, 3659
BsaWI WCCGGW 2 cut(s) 2728, 3129
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 1888, 2258, 3479, 3675, 3697
Bse118I RCCGGY 1 cut(s) 3112
Bse1I ACTGG 2 cut(s) 1026, 3641
Bse3DI GCAATG 3 cut(s) 512, 876, 3825
BseBI CCWGG 1 cut(s) 1887
BseCI ATCGAT 1 cut(s) 1966
BseDI CCNNGG 5 cut(s) 1799, 1886, 2759, 2795, 3659
BseGI GGATG 4 cut(s) 1882, 2520, 2538, 3719
BseLI CCNNNNNNNGG 6 cut(s) 133, 1888, 2258, 3479, 3675, 3697
BseMI GCAATG 3 cut(s) 512, 876, 3825
BseNI ACTGG 2 cut(s) 1026, 3641
BseRI GAGGAG 4 cut(s) 304, 322, 3438, 3553
BseSI GKGCMC 2 cut(s) 277, 2907
BseXI GCAGC 5 cut(s) 1915, 2665, 2832, 2931, 3642
BseYI CCCAGC 2 cut(s) 3441, 3472
Bsh1236I CGCG 3 cut(s) 1010, 1754, 2305
Bsh1285I CGRYCG 1 cut(s) 2729
BshFI GGCC 4 cut(s) 2492, 2910, 3112, 3556
BshNI GGYRCC 1 cut(s) 274
BshVI ATCGAT 1 cut(s) 1966
BsiEI CGRYCG 1 cut(s) 2729
BsiHKAI GWGCWC 3 cut(s) 747, 2931, 3837
BsiHKCI CYCGRG 1 cut(s) 2702
BsiSI CCGG 7 cut(s) 2594, 2729, 2907, 2948, 3113, 3130, 3847
BslFI GGGAC 4 cut(s) 1447, 1916, 2116, 3692
BslI CCNNNNNNNGG 6 cut(s) 133, 1888, 2258, 3479, 3675, 3697
BsmBI CGTCTC 1 cut(s) 2083
BsmFI GGGAC 4 cut(s) 1447, 1916, 2116, 3692
BsmI GAATGC 2 cut(s) 669, 897
BsnI GGCC 4 cut(s) 2492, 2910, 3112, 3556
Bso31I GGTCTC 4 cut(s) 1270, 2541, 2615, 3121
BsoBI CYCGRG 1 cut(s) 2702
Bsp119I TTCGAA 2 cut(s) 1154, 3396
Bsp1286I GDGCHC 6 cut(s) 277, 747, 2907, 2931, 3448, 3837
Bsp1407I TGTACA 1 cut(s) 3123
Bsp143I GATC 4 cut(s) 353, 2262, 2442, 3546
Bsp1720I GCTNAGC 1 cut(s) 3267
BspACI CCGC 3 cut(s) 215, 2030, 2305
BspANI GGCC 4 cut(s) 2492, 2910, 3112, 3556
BspDI ATCGAT 1 cut(s) 1966
BspFNI CGCG 3 cut(s) 1010, 1754, 2305
BspLI GGNNCC 6 cut(s) 276, 1635, 2264, 2280, 3447, 3642
BspMAI CTGCAG 1 cut(s) 2770
BspPI GGATC 3 cut(s) 2257, 2270, 2437
BspQI GCTCTTC 2 cut(s) 1550, 3805
BspT104I TTCGAA 2 cut(s) 1154, 3396
BspT107I GGYRCC 1 cut(s) 274
BspTNI GGTCTC 4 cut(s) 1270, 2541, 2615, 3121
BsrDI GCAATG 3 cut(s) 512, 876, 3825
BsrFI RCCGGY 1 cut(s) 3112
BsrGI TGTACA 1 cut(s) 3123
BsrI ACTGG 2 cut(s) 1026, 3641
BssAI RCCGGY 1 cut(s) 3112
BssECI CCNNGG 5 cut(s) 1799, 1886, 2759, 2795, 3659
BssMI GATC 4 cut(s) 353, 2262, 2442, 3546
BssSI CACGAG 2 cut(s) 1790, 2900
BssT1I CCWWGG 4 cut(s) 1799, 2759, 2795, 3659
Bst2BI CACGAG 2 cut(s) 1790, 2900
Bst2UI CCWGG 1 cut(s) 1887
Bst4CI ACNGT 8 cut(s) 39, 58, 1438, 2131, 2621, 2735, 2834, 2856
BstAPI GCANNNNNTGC 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 3123
BstBAI YACGTR 2 cut(s) 1663, 2168
BstBI TTCGAA 2 cut(s) 1154, 3396
BstC8I GCNNGC 4 cut(s) 1188, 1257, 1414, 3248
BstEII GGTNACC 1 cut(s) 3664
BstF5I GGATG 4 cut(s) 1882, 2520, 2538, 3719
BstFNI CGCG 3 cut(s) 1010, 1754, 2305
BstHHI GCGC 1 cut(s) 1012
BstKTI GATC 4 cut(s) 356, 2265, 2445, 3549
BstMBI GATC 4 cut(s) 353, 2262, 2442, 3546
BstMCI CGRYCG 1 cut(s) 2729
BstMWI GCNNNNNNNGC 7 cut(s) 887, 1928, 3109, 3243, 3482, 3779, 3827
BstNI CCWGG 1 cut(s) 1887
BstNSI RCATGY 7 cut(s) 87, 170, 897, 1190, 1259, 2659, 3250
BstPAI GACNNNNGTC 1 cut(s) 1908
BstPI GGTNACC 1 cut(s) 3664
BstSCI CCNGG 3 cut(s) 1885, 2592, 2905
BstSFI CTRYAG 1 cut(s) 2766
BstSLI GKGCMC 2 cut(s) 277, 2907
BstUI CGCG 3 cut(s) 1010, 1754, 2305
BstV1I GCAGC 5 cut(s) 1915, 2665, 2832, 2931, 3642
BstV2I GAAGAC 1 cut(s) 332
BstX2I RGATCY 2 cut(s) 353, 2262
BstXI CCANNNNNNTGG 3 cut(s) 121, 1198, 2377
BstYI RGATCY 2 cut(s) 353, 2262
Bsu15I ATCGAT 1 cut(s) 1966
BsuI GTATCC 1 cut(s) 73
BsuRI GGCC 4 cut(s) 2492, 2910, 3112, 3556
BsuTUI ATCGAT 1 cut(s) 1966
BtsCI GGATG 4 cut(s) 1882, 2520, 2538, 3719
BtsIMutI CAGTG 4 cut(s) 44, 2775, 2830, 3644
Cac8I GCNNGC 4 cut(s) 1188, 1257, 1414, 3248
CfoI GCGC 1 cut(s) 1012
Cfr10I RCCGGY 1 cut(s) 3112
Cfr13I GGNCC 4 cut(s) 124, 1879, 3110, 3132
ClaI ATCGAT 1 cut(s) 1966
Csp6I GTAC 2 cut(s) 2249, 3124
CviQI GTAC 2 cut(s) 2249, 3124
DpnI GATC 4 cut(s) 355, 2264, 2444, 3548
DpnII GATC 4 cut(s) 353, 2262, 2442, 3546
DraI TTTAAA 1 cut(s) 1224
DraIII CACNNNGTG 1 cut(s) 2836
DrdI GACNNNNNNGTC 1 cut(s) 2733
DseDI GACNNNNNNGTC 1 cut(s) 2733
Ecl136II GAGCTC 2 cut(s) 2929, 3835
Eco130I CCWWGG 4 cut(s) 1799, 2759, 2795, 3659
Eco147I AGGCCT 1 cut(s) 2492
Eco24I GRGCYC 3 cut(s) 2931, 3448, 3837
Eco31I GGTCTC 4 cut(s) 1270, 2541, 2615, 3121
Eco32I GATATC 1 cut(s) 2569
Eco47I GGWCC 3 cut(s) 124, 1879, 3132
Eco53kI GAGCTC 2 cut(s) 2929, 3835
Eco57I CTGAAG 2 cut(s) 2619, 3246
Eco72I CACGTG 1 cut(s) 2168
Eco88I CYCGRG 1 cut(s) 2702
Eco91I GGTNACC 1 cut(s) 3664
EcoICRI GAGCTC 2 cut(s) 2929, 3835
EcoO65I GGTNACC 1 cut(s) 3664
EcoRI GAATTC 1 cut(s) 1449
EcoRII CCWGG 1 cut(s) 1885
EcoRV GATATC 1 cut(s) 2569
EcoT14I CCWWGG 4 cut(s) 1799, 2759, 2795, 3659
EcoT22I ATGCAT 4 cut(s) 712, 899, 1261, 1499
EcoT38I GRGCYC 3 cut(s) 2931, 3448, 3837
ErhI CCWWGG 4 cut(s) 1799, 2759, 2795, 3659
Esp3I CGTCTC 1 cut(s) 2083
FalI AAGNNNNNCTT 4 cut(s) 1660, 1692, 3244, 3276
FaqI GGGAC 4 cut(s) 1447, 1916, 2116, 3692
FauI CCCGC 2 cut(s) 208, 2023
FbaI TGATCA 1 cut(s) 3546
FblI GTMKAC 1 cut(s) 2181
Fnu4HI GCNGC 6 cut(s) 1929, 2306, 2679, 2821, 2945, 3656
FokI GGATG 4 cut(s) 1869, 2507, 2525, 3726
FriOI GRGCYC 3 cut(s) 2931, 3448, 3837
Fsp4HI GCNGC 6 cut(s) 1929, 2306, 2679, 2821, 2945, 3656
GlaI GCGC 1 cut(s) 1011
GluI GCNGC 6 cut(s) 1929, 2306, 2679, 2821, 2945, 3656
GsaI CCCAGC 2 cut(s) 3445, 3476
GsuI CTGGAG 1 cut(s) 325
HaeIII GGCC 4 cut(s) 2492, 2910, 3112, 3556
HapII CCGG 7 cut(s) 2594, 2729, 2907, 2948, 3113, 3130, 3847
HhaI GCGC 1 cut(s) 1012
Hin6I GCGC 1 cut(s) 1010
HinP1I GCGC 1 cut(s) 1010
HincII GTYRAC 1 cut(s) 3736
HindII GTYRAC 1 cut(s) 3736
HindIII AAGCTT 6 cut(s) 1669, 2399, 3057, 3235, 3297, 3780
HpaII CCGG 7 cut(s) 2594, 2729, 2907, 2948, 3113, 3130, 3847
HphI GGTGA 9 cut(s) 39, 103, 135, 1036, 1570, 2572, 3043, 3334, 3676
Hpy99I CGWCG 2 cut(s) 368, 469
HpyAV CCTTC 6 cut(s) 910, 1615, 1703, 2482, 3073, 3515
HpyCH4III ACNGT 8 cut(s) 39, 58, 1438, 2131, 2621, 2735, 2834, 2856
HpyCH4IV ACGT 4 cut(s) 131, 1662, 2167, 2955
HpyF10VI GCNNNNNNNGC 7 cut(s) 887, 1928, 3109, 3243, 3482, 3779, 3827
HpySE526I ACGT 4 cut(s) 131, 1662, 2167, 2955
HspAI GCGC 1 cut(s) 1010
Ksp22I TGATCA 1 cut(s) 3546
Kzo9I GATC 4 cut(s) 353, 2262, 2442, 3546
LguI GCTCTTC 2 cut(s) 1550, 3805
LmnI GCTCC 5 cut(s) 1633, 2694, 2715, 2866, 3451
Lsp1109I GCAGC 5 cut(s) 1915, 2665, 2832, 2931, 3642
LweI GCATC 5 cut(s) 414, 697, 719, 1399, 3168
MaeII ACGT 4 cut(s) 131, 1662, 2167, 2955
MalI GATC 4 cut(s) 355, 2264, 2444, 3548
MboI GATC 4 cut(s) 353, 2262, 2442, 3546
MfeI CAATTG 2 cut(s) 554, 973
MflI RGATCY 2 cut(s) 353, 2262
MhlI GDGCHC 6 cut(s) 277, 747, 2907, 2931, 3448, 3837
MlyI GAGTC 2 cut(s) 1898, 2460
MmeI TCCRAC 4 cut(s) 518, 733, 1179, 3327
Mph1103I ATGCAT 4 cut(s) 712, 899, 1261, 1499
MroXI GAANNNNTTC 4 cut(s) 372, 473, 3038, 3259
MslI CAYNNNNRTG 3 cut(s) 145, 3320, 3810
MspA1I CMGCKG 2 cut(s) 3476, 3533
MspI CCGG 7 cut(s) 2594, 2729, 2907, 2948, 3113, 3130, 3847
MspR9I CCNGG 3 cut(s) 1887, 2594, 2907
MunI CAATTG 2 cut(s) 554, 973
Mva1269I GAATGC 2 cut(s) 669, 897
MvaI CCWGG 1 cut(s) 1887
MvnI CGCG 3 cut(s) 1010, 1754, 2305
MwoI GCNNNNNNNGC 7 cut(s) 887, 1928, 3109, 3243, 3482, 3779, 3827
NciI CCSGG 2 cut(s) 2594, 2907
NdeII GATC 4 cut(s) 353, 2262, 2442, 3546
NlaIV GGNNCC 6 cut(s) 276, 1635, 2264, 2280, 3447, 3642
NmeAIII GCCGAG 1 cut(s) 3856
NmuCI GTSAC 5 cut(s) 1784, 2435, 2500, 2773, 3664
NsiI ATGCAT 4 cut(s) 712, 899, 1261, 1499
NspI RCATGY 7 cut(s) 87, 170, 897, 1190, 1259, 2659, 3250
NspV TTCGAA 2 cut(s) 1154, 3396
PaeI GCATGC 3 cut(s) 1190, 1259, 3250
PceI AGGCCT 1 cut(s) 2492
PciI ACATGT 1 cut(s) 2655
PciSI GCTCTTC 2 cut(s) 1550, 3805
PcsI WCGNNNNNNNCGW 2 cut(s) 2961, 3147
PctI GAATGC 2 cut(s) 669, 897
PdmI GAANNNNTTC 4 cut(s) 372, 473, 3038, 3259
PflFI GACNNNGTC 1 cut(s) 3146
PflMI CCANNNNNTGG 3 cut(s) 2258, 3479, 3697
PkrI GCNGC 6 cut(s) 1930, 2307, 2680, 2822, 2946, 3657
PleI GAGTC 2 cut(s) 1898, 2460
PmaCI CACGTG 1 cut(s) 2168
PmlI CACGTG 1 cut(s) 2168
PpsI GAGTC 2 cut(s) 1898, 2460
Ppu21I YACGTR 2 cut(s) 1663, 2168
PscI ACATGT 1 cut(s) 2655
PshAI GACNNNNGTC 1 cut(s) 1908
PshBI ATTAAT 1 cut(s) 1721
PsiI TTATAA 3 cut(s) 339, 1016, 2204
Psp124BI GAGCTC 2 cut(s) 2931, 3837
Psp6I CCWGG 1 cut(s) 1885
PspCI CACGTG 1 cut(s) 2168
PspEI GGTNACC 1 cut(s) 3664
PspFI CCCAGC 2 cut(s) 3441, 3472
PspGI CCWGG 1 cut(s) 1885
PspN4I GGNNCC 6 cut(s) 276, 1635, 2264, 2280, 3447, 3642
PspPI GGNCC 4 cut(s) 124, 1879, 3110, 3132
PsrI GAACNNNNNNTAC 2 cut(s) 3026, 3058
PstI CTGCAG 1 cut(s) 2770
PsuI RGATCY 2 cut(s) 353, 2262
PsyI GACNNNGTC 1 cut(s) 3146
PvuII CAGCTG 2 cut(s) 3476, 3533
RsaI GTAC 2 cut(s) 2250, 3125
RsaNI GTAC 2 cut(s) 2249, 3124
RseI CAYNNNNRTG 3 cut(s) 145, 3320, 3810
SacI GAGCTC 2 cut(s) 2931, 3837
SapI GCTCTTC 2 cut(s) 1550, 3805
SatI GCNGC 6 cut(s) 1929, 2306, 2679, 2821, 2945, 3656
Sau3AI GATC 4 cut(s) 353, 2262, 2442, 3546
Sau96I GGNCC 4 cut(s) 124, 1879, 3110, 3132
SchI GAGTC 2 cut(s) 1898, 2460
ScrFI CCNGG 3 cut(s) 1887, 2594, 2907
SduI GDGCHC 6 cut(s) 277, 747, 2907, 2931, 3448, 3837
SfaNI GCATC 5 cut(s) 414, 697, 719, 1399, 3168
SfcI CTRYAG 1 cut(s) 2766
SfuI TTCGAA 2 cut(s) 1154, 3396
SinI GGWCC 3 cut(s) 124, 1879, 3132
SmiMI CAYNNNNRTG 3 cut(s) 145, 3320, 3810
SmlI CTYRAG 4 cut(s) 1032, 2223, 2385, 3836
SmoI CTYRAG 4 cut(s) 1032, 2223, 2385, 3836
SphI GCATGC 3 cut(s) 1190, 1259, 3250
SseBI AGGCCT 1 cut(s) 2492
SsiI CCGC 3 cut(s) 215, 2030, 2305
SspI AATATT 2 cut(s) 104, 1124
SstI GAGCTC 2 cut(s) 2931, 3837
StuI AGGCCT 1 cut(s) 2492
StyD4I CCNGG 3 cut(s) 1885, 2592, 2905
StyI CCWWGG 4 cut(s) 1799, 2759, 2795, 3659
TaaI ACNGT 8 cut(s) 39, 58, 1438, 2131, 2621, 2735, 2834, 2856
TaiI ACGT 4 cut(s) 134, 1665, 2170, 2958
TatI WGTACW 1 cut(s) 3123
TauI GCSGC 1 cut(s) 2308
TscAI CASTG 4 cut(s) 44, 2782, 2837, 3651
TseFI GTSAC 5 cut(s) 1784, 2435, 2500, 2773, 3664
TseI GCWGC 5 cut(s) 1928, 2678, 2820, 2944, 3655
Tsp45I GTSAC 5 cut(s) 1784, 2435, 2500, 2773, 3664
TspGWI ACGGA 4 cut(s) 524, 837, 2057, 2796
TspRI CASTG 4 cut(s) 44, 2782, 2837, 3651
Tth111I GACNNNGTC 1 cut(s) 3146
Van91I CCANNNNNTGG 3 cut(s) 2258, 3479, 3697
VpaK11BI GGWCC 3 cut(s) 124, 1879, 3132
VspI ATTAAT 1 cut(s) 1721
XapI RAATTY 7 cut(s) 407, 1341, 1449, 1470, 1489, 2406, 2587
XbaI TCTAGA 1 cut(s) 2998
XceI RCATGY 7 cut(s) 87, 170, 897, 1190, 1259, 2659, 3250
XcmI CCANNNNNNNNNTGG 1 cut(s) 3549
XmaJI CCTAGG 2 cut(s) 2795, 3659
XmiI GTMKAC 1 cut(s) 2181
XmnI GAANNNNTTC 4 cut(s) 372, 473, 3038, 3259
Zsp2I ATGCAT 4 cut(s) 712, 899, 1261, 1499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.