Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0013612

Physical Location & Seq

Genomic Coordinates Reverse (-)

16741488 .. 16746889

Gene Structure 5402 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGTTTTATAATCCGCTCTTAACTGTTTTGTCAGATCAGTCGACATTAAAACACGTTGTGGAACCTCGCCTCACAAAGCTCTTGTCTCTTCCGTCTGCAATTCCGCCACGTCGACGGTCGAAGGTACACAAAAAGACAAAAACCCAGTCAGTTCCCAGAACCGGGAGGTTCCCCTCTGACACGGCTCCCATTCCAGGCATCTCCCGCACCACGTGTCGATTCACCACGCGAAGGCAGTGTAAATCACGTGATTCGCATGCACCTTCCGTCACGCTGTTTGTTGTCTGCCTAGAGAGAGAGGAGGAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCACCAAAAATGGGTAAGGTAGTGGAGAGGAAGAAGAAGAAAGGACGGCCCTCTCTTTTGGATCTTCAAAAACGGACTCTCAGAGAGCAGCAGGAGCAATTGCAACAGCAGCAGAAGCGAAAGCCCAACCCTGCCCCTCATTCCAACCCTAATTACAGGACTTCCCCTGCCGACTCCGCCCGCGCTTCCCTCCGTCGATCCACCCGCCGCAACCCTGACCCCGACGGTAATTCAAACGACGAGGAGGAGGATGAAGACGAAGACGAAGACGCTTCGGCCGGGAAGCGCCGCGAGAAAAAACTCAAGCTGGTCCTCAAATTGCCCCCCAACAATCAGAAGTCGTCGGCCAATTCCGCGACTCGGAACTCCCACGGCGGCGGCTCCGAGTCCAATGACGAGGACGACGGCGACTACAGAACCGACCGGAAGCGCAAGATCAATGCGATCGGCGATGGATCTGGTCTCGCTCACCCTCAAAAGGGTGAGAAATCAATTCCTGCTGCAAACCCACCAAGCAGCCTCCAAGGAGGGGCTACAACGTTGGACCCTGGACCCTCTACCCCTTTGCCTGATAAAAAGTTGCTGCTGTTCGTTCTTGACAGGCTCCAAAAGAAGGACACGTACGGAGTGTTTTCTGAACCAGTGGACCCCAAAGAGCTTCCGGACTACCATGAAGTAATAGAGCACCCTATGGATTTCGGGACGGTGAAGAAGAATCTTACGACTGGAGTGTACTCCAGTTTGGAACAGTTTGAGGATGATATTTTCTTAATCTGCTCCAATGCGATGCAGTACAATGCCCCAGATACCATATATTTTCGACAGGCACGCTCAATACAAGAGCTTGCGAAAAAGAATTTTGAAAATTTGAGGCAAGACAGTGATGATAATGAATCAGGACCAAAGGTCGTTAGAAGAGGTAGACCACCAACAAAAAATTTGCATAAAAAACTGGGCAGGCCTTCCTTGGACCGTGCTGGTTCAGAGTTCTCAAATGCCACTCTTGCTACTGGGGCTGAAAATGCCACATTGGATCATAAAAAAGGATCTCATCTTTCAGACAAGTCTGGTTTGACAGGTTCACGGAATAATGATGTTTATACTAATTGGTTGACGGATAACAAGTTTGAGAGGAATGATGACGTCACAGGTTCCACGAAGGCTAATTCGAAGCTAGGGAAAAAACATTTTGTGTTTGATGAGAACAGGCGTAATACATATAATCAATCTCATCCTTCAGCCAGCGGACAAGAGTCATCTGTATTGACTACATTCGATGGAGAAAGGAAACAGCTAATGCCTGTAGGGCTTCACTCGGACTATGGTTATGCAAGGAGCCTGGCTCGATTTGCTGCAAATCTTGGACCTGTTGCGTGGAACATTGCTGCAAAGAAGATTGAAAGGTCTTTACCCCCTGGTGTTAAGTTTGGCCCAGGTTGGATTGGAGAAAATGACGTTGCGCCAAATAGGCCACTGCAATTAGCCGCAGCCTCGCTAGGTCAGCCATCTTCATCAGAGCCCTTTCCCATTCGTCCAAATGCATCTTCTGCTGCAACATCATGCTCTGTTGAGTCTAATGGAGATAAATTGTCAGAGAAGCCATCGGGACATAACTCGTCAGAGAAGCCATCGGGACATAACTCATCAGAGAAGCATGTGCCTTCTATTCCTTCAGCAAATACAAGCAGTCCTCTTCCTCTGTCTGCTACTACCTCATCACCCCCCATTGTTGCTAATAAATCTCCTGAACCCCTCCCTGGAAAAGTAGAAACTGCTGAAGGATCAAACGCTCATACTGGGTTTAATATGCCGAGCAGCAATCTTGGTGTAATGAGACCGAGGCCTCCATTTCAGATGCATCAGAATTCCGTATTCCAACCTGGGATCAACGGATTTAACGGCACATACGGATTAAACATTCGTGCTCAGATGGGAAAGCCAGTTGGAGTGGCCAGGCCCGGTGGTTTTAACTTCCAGCCGTCTCAAATGCTCGACGCAGTCTCTAGGACTAACGCTAACTTCCATCCAGCTACTTCAAACAGCTTAACTTCAGAAGAAACTAAACTCTCCAAAACTCCAGGTATAATAAGCTCTTCCAGTTCATTTCCAAATTCAGTGAATGAGGCAACGGCAGCACGGACAATGGGGACTCTTCCTCGGCCATCTTGGCAAGGGTTGTCACAACAGCAGAAACCCAATTCAGCATTGACGCCACAACAAAAGCCCGACTCAGTTCCACCAGACCTGAATGTCAGGTTCCAGTCCCCAGGGTCCCCTAGTTCTAGCCGGGCTGATTCAGCGCAGCCGGATTTAGCATTGCAGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

892

Amino Acids

97.66

Weight (kDa)

9.61

Isoelectric Point (pI)

56.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	312 - 393	1e-24	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013612)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g16690
malus_domestica	MD05G1135100.v1.1 MD10G1140600.v1.1
prunus_persica	Prupe.8G179000_v2.0.a1
pyrus_communis	pycom05g13170 pycom10g11920
rosa_chinensis	RchiOBHm_Chr6g0280831
rosa_laevigata	RLG00000013027
rosa_multiflora	Rmu_co8368811.1_g000001 Rmu_sc0003153.1_g000023 Rmu_sc0038972.1_g000001
rosa_roxburghii	Rroxscaffold_7G00187590
rosa_rugosa	Rorug06G0134800
rosa_samantha	Rh6AG248200 Rh6BG249700 Rh6CG250900 Rh6DG242500
rosa_wichuraiana	Rw6G021450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	9
AasI	GACNNNNNNGTC	1 cut(s)	2597
AatII	GACGTC	1 cut(s)	1494
AccB1I	GGYRCC	1 cut(s)	349
AccBSI	CCGCTC	1 cut(s)	16
AccI	GTMKAC	3 cut(s)	41, 112, 1270
AccII	CGCG	4 cut(s)	229, 531, 639, 704
AccIII	TCCGGA	1 cut(s)	1009
AclI	AACGTT	1 cut(s)	887
AclWI	GGATC	7 cut(s)	417, 540, 811, 1389, 1402, 2137, 2240
AcoI	YGGCCR	4 cut(s)	624, 693, 2298, 2507
AcsI	RAATTY	5 cut(s)	1204, 1213, 1285, 2212, 2458
AcuI	CTGAAG	4 cut(s)	1569, 2004, 2145, 2382
AcvI	CACGTG	2 cut(s)	213, 248
AcyI	GRCGYC	2 cut(s)	1491, 2558
AdeI	CACNNNGTG	2 cut(s)	58, 213
AfaI	GTAC	4 cut(s)	126, 971, 1082, 1142
AflIII	ACRYGT	3 cut(s)	52, 212, 966
AgsI	TTSAA	5 cut(s)	416, 582, 1211, 1748, 2385
AhdI	GACNNNNNGTC	1 cut(s)	1253
AjiI	CACGTC	1 cut(s)	110
AjuI	GAANNNNNNNTTGG	2 cut(s)	1876, 1908
Alw21I	GWGCWC	2 cut(s)	1035, 2275
Alw26I	GTCTC	5 cut(s)	90, 815, 2176, 2334, 2353
AlwI	GGATC	7 cut(s)	417, 540, 811, 1389, 1402, 2137, 2240
Aor13HI	TCCGGA	1 cut(s)	1009
ApoI	RAATTY	5 cut(s)	1204, 1213, 1285, 2212, 2458
ArsI	GACNNNNNNTTYG	4 cut(s)	68, 100, 131, 163
AspLEI	GCGC	5 cut(s)	533, 636, 780, 1810, 2650
AsuC2I	CCSGG	4 cut(s)	163, 628, 2307, 2636
AsuHPI	GGTGA	5 cut(s)	214, 809, 842, 1066, 2058
AsuII	TTCGAA	1 cut(s)	1517
AvaII	GGWCC	8 cut(s)	658, 892, 899, 994, 1247, 1318, 1712, 2619
BaeGI	GKGCMC	1 cut(s)	352
BalI	TGGCCA	1 cut(s)	2300
BanI	GGYRCC	1 cut(s)	349
BanII	GRGCYC	1 cut(s)	1869
BarI	GAAGNNNNNNTAC	2 cut(s)	953, 985
BbrPI	CACGTG	2 cut(s)	213, 248
BbsI	GAAGAC	3 cut(s)	609, 615, 621
Bbv12I	GWGCWC	2 cut(s)	1035, 2275
BccI	CCATC	8 cut(s)	794, 1619, 1861, 1957, 1984, 2272, 2379, 2518
BceAI	ACGGC	7 cut(s)	198, 410, 736, 769, 2263, 2311, 2493
BcnI	CCSGG	4 cut(s)	163, 628, 2307, 2636
BcoDI	GTCTC	5 cut(s)	90, 815, 2176, 2334, 2353
BfaI	CTAG	6 cut(s)	290, 1523, 1844, 2352, 2625, 2631
BfmI	CTRYAG	2 cut(s)	760, 1650
BfoI	RGCGCY	1 cut(s)	637
BglI	GCCNNNNNGGC	3 cut(s)	1654, 1816, 2515
Bme18I	GGWCC	8 cut(s)	658, 892, 899, 994, 1247, 1318, 1712, 2619
BmeRI	GACNNNNNGTC	1 cut(s)	1253
BmgBI	CACGTC	1 cut(s)	110
BmrI	ACTGGG	4 cut(s)	139, 1310, 1368, 2154
BmsI	GCATC	5 cut(s)	207, 1125, 1898, 2193, 2215
BmuI	ACTGGG	4 cut(s)	139, 1310, 1368, 2154
BoxI	GACNNNNGTC	1 cut(s)	1600
BpiI	GAAGAC	3 cut(s)	609, 615, 621
BplI	GAGNNNNNCTC	2 cut(s)	1675, 1707
BpmI	CTGGAG	3 cut(s)	1069, 1095, 2409
Bpu14I	TTCGAA	1 cut(s)	1517
BpuEI	CTTGAG	1 cut(s)	635
BpuMI	CCSGG	4 cut(s)	163, 628, 2307, 2636
BsaAI	YACGTR	3 cut(s)	213, 248, 969
BsaHI	GRCGYC	2 cut(s)	1491, 2558
BsaI	GGTCTC	2 cut(s)	815, 2176
BsaWI	WCCGGW	2 cut(s)	771, 1009
Bse3DI	GCAATG	2 cut(s)	1728, 2663
BseAI	TCCGGA	1 cut(s)	1009
BseGI	GGATG	4 cut(s)	604, 1111, 1579, 2371
BseMI	GCAATG	2 cut(s)	1728, 2663
BseMII	CTCAG	3 cut(s)	442, 2288, 2592
BseRI	GAGGAG	5 cut(s)	314, 317, 322, 605, 608
BseSI	GKGCMC	1 cut(s)	352
BseX3I	CGGCCG	1 cut(s)	624
Bsh1236I	CGCG	4 cut(s)	229, 531, 639, 704
Bsh1285I	CGRYCG	4 cut(s)	119, 627, 772, 795
BshNI	GGYRCC	1 cut(s)	349
BsiEI	CGRYCG	4 cut(s)	119, 627, 772, 795
BsiHKAI	GWGCWC	2 cut(s)	1035, 2275
BsiSI	CCGG	7 cut(s)	162, 627, 772, 1010, 2307, 2635, 2654
BsiWI	CGTACG	1 cut(s)	969
BslFI	GGGAC	6 cut(s)	1063, 1968, 1995, 2509, 2596, 2605
BsmAI	GTCTC	5 cut(s)	90, 815, 2176, 2334, 2353
BsmBI	CGTCTC	1 cut(s)	2334
BsmFI	GGGAC	6 cut(s)	1063, 1968, 1995, 2509, 2596, 2605
Bso31I	GGTCTC	2 cut(s)	815, 2176
Bsp119I	TTCGAA	1 cut(s)	1517
Bsp1286I	GDGCHC	4 cut(s)	352, 1035, 1869, 2275
Bsp13I	TCCGGA	1 cut(s)	1009
BspCNI	CTCAG	3 cut(s)	441, 2287, 2591
BspEI	TCCGGA	1 cut(s)	1009
BspFNI	CGCG	4 cut(s)	229, 531, 639, 704
BspPI	GGATC	7 cut(s)	417, 540, 811, 1389, 1402, 2137, 2240
BspQI	GCTCTTC	1 cut(s)	2446
BspT104I	TTCGAA	1 cut(s)	1517
BspT107I	GGYRCC	1 cut(s)	349
BspTNI	GGTCTC	2 cut(s)	815, 2176
BsrBI	CCGCTC	1 cut(s)	16
BsrDI	GCAATG	2 cut(s)	1728, 2663
BssNI	GRCGYC	2 cut(s)	1491, 2558
BssT1I	CCWWGG	2 cut(s)	871, 1314
Bst4CI	ACNGT	7 cut(s)	25, 117, 575, 1054, 1098, 1229, 1322
Bst6I	CTCTTC	5 cut(s)	93, 1258, 2046, 2446, 2505
BstACI	GRCGYC	2 cut(s)	1491, 2558
BstAPI	GCANNNNNTGC	1 cut(s)	1895
BstBAI	YACGTR	3 cut(s)	213, 248, 969
BstBI	TTCGAA	1 cut(s)	1517
BstC8I	GCNNGC	6 cut(s)	258, 529, 1177, 1194, 1307, 1591
BstDEI	CTNAG	3 cut(s)	428, 2274, 2578
BstDSI	CCRYGG	1 cut(s)	718
BstF5I	GGATG	4 cut(s)	604, 1111, 1579, 2371
BstFNI	CGCG	4 cut(s)	229, 531, 639, 704
BstH2I	RGCGCY	1 cut(s)	637
BstHHI	GCGC	5 cut(s)	533, 636, 780, 1810, 2650
BstMAI	GTCTC	5 cut(s)	90, 815, 2176, 2334, 2353
BstMCI	CGRYCG	4 cut(s)	119, 627, 772, 795
BstNSI	RCATGY	2 cut(s)	260, 2006
BstPAI	GACNNNNGTC	1 cut(s)	1600
BstSFI	CTRYAG	2 cut(s)	760, 1650
BstSLI	GKGCMC	1 cut(s)	352
BstUI	CGCG	4 cut(s)	229, 531, 639, 704
BstV2I	GAAGAC	3 cut(s)	609, 615, 621
BstX2I	RGATCY	3 cut(s)	409, 803, 1394
BstYI	RGATCY	3 cut(s)	409, 803, 1394
BstZI	CGGCCG	1 cut(s)	624
BtgI	CCRYGG	1 cut(s)	718
BtgZI	GCGATG	2 cut(s)	813, 1148
BtrI	CACGTC	1 cut(s)	110
BtsCI	GGATG	4 cut(s)	604, 1111, 1579, 2371
BtsI	GCAGTG	2 cut(s)	242, 1820
BtsIMutI	CAGTG	5 cut(s)	242, 996, 1234, 1820, 2469
Cac8I	GCNNGC	6 cut(s)	258, 529, 1177, 1194, 1307, 1591
CfoI	GCGC	5 cut(s)	533, 636, 780, 1810, 2650
CseI	GACGC	3 cut(s)	626, 2351, 2566
Csp6I	GTAC	4 cut(s)	125, 970, 1081, 1141
CviAII	CATG	4 cut(s)	257, 1019, 1908, 2003
CviQI	GTAC	4 cut(s)	125, 970, 1081, 1141
DdeI	CTNAG	3 cut(s)	428, 2274, 2578
DraIII	CACNNNGTG	2 cut(s)	58, 213
DrdI	GACNNNNNNGTC	1 cut(s)	2597
DriI	GACNNNNNGTC	1 cut(s)	1253
DseDI	GACNNNNNNGTC	1 cut(s)	2597
EaeI	YGGCCR	4 cut(s)	624, 693, 2298, 2507
EagI	CGGCCG	1 cut(s)	624
Eam1104I	CTCTTC	5 cut(s)	93, 1258, 2046, 2446, 2505
Eam1105I	GACNNNNNGTC	1 cut(s)	1253
EarI	CTCTTC	5 cut(s)	93, 1258, 2046, 2446, 2505
EciI	GGCGGA	2 cut(s)	93, 514
EclXI	CGGCCG	1 cut(s)	624
Eco130I	CCWWGG	2 cut(s)	871, 1314
Eco147I	AGGCCT	2 cut(s)	1309, 2191
Eco24I	GRGCYC	1 cut(s)	1869
Eco31I	GGTCTC	2 cut(s)	815, 2176
Eco47I	GGWCC	8 cut(s)	658, 892, 899, 994, 1247, 1318, 1712, 2619
Eco52I	CGGCCG	1 cut(s)	624
Eco57I	CTGAAG	4 cut(s)	1569, 2004, 2145, 2382
Eco72I	CACGTG	2 cut(s)	213, 248
EcoO109I	RGGNCCY	1 cut(s)	2619
EcoRI	GAATTC	1 cut(s)	2212
EcoT14I	CCWWGG	2 cut(s)	871, 1314
EcoT22I	ATGCAT	2 cut(s)	1891, 2208
EcoT38I	GRGCYC	1 cut(s)	1869
ErhI	CCWWGG	2 cut(s)	871, 1314
Esp3I	CGTCTC	1 cut(s)	2334
FaeI	CATG	4 cut(s)	260, 1022, 1911, 2006
FaqI	GGGAC	6 cut(s)	1063, 1968, 1995, 2509, 2596, 2605
FatI	CATG	4 cut(s)	256, 1018, 1907, 2002
FauI	CCCGC	3 cut(s)	212, 536, 560
FblI	GTMKAC	3 cut(s)	41, 112, 1270
FokI	GGATG	4 cut(s)	611, 1118, 1566, 2358
FriOI	GRGCYC	1 cut(s)	1869
FspBI	CTAG	6 cut(s)	290, 1523, 1844, 2352, 2625, 2631
GlaI	GCGC	5 cut(s)	532, 635, 779, 1809, 2649
GsuI	CTGGAG	3 cut(s)	1069, 1095, 2409
HaeII	RGCGCY	1 cut(s)	637
HapII	CCGG	7 cut(s)	162, 627, 772, 1010, 2307, 2635, 2654
HgaI	GACGC	3 cut(s)	626, 2351, 2566
HhaI	GCGC	5 cut(s)	533, 636, 780, 1810, 2650
Hin1I	GRCGYC	2 cut(s)	1491, 2558
Hin1II	CATG	4 cut(s)	260, 1022, 1911, 2006
Hin6I	GCGC	5 cut(s)	531, 634, 778, 1808, 2648
HinP1I	GCGC	5 cut(s)	531, 634, 778, 1808, 2648
HincII	GTYRAC	3 cut(s)	42, 113, 1461
HindII	GTYRAC	3 cut(s)	42, 113, 1461
HpaII	CCGG	7 cut(s)	162, 627, 772, 1010, 2307, 2635, 2654
HphI	GGTGA	5 cut(s)	214, 809, 842, 1066, 2058
Hpy166II	GTNNAC	8 cut(s)	42, 113, 127, 994, 1081, 1271, 1430, 1461
Hpy188III	TCNNGA	7 cut(s)	944, 1010, 1048, 1245, 1953, 1980, 2093
Hpy8I	GTNNAC	8 cut(s)	42, 113, 127, 994, 1081, 1271, 1430, 1461
Hpy99I	CGWCG	8 cut(s)	114, 117, 546, 575, 590, 694, 755, 2345
HpyCH4III	ACNGT	7 cut(s)	25, 117, 575, 1054, 1098, 1229, 1322
HpyCH4IV	ACGT	8 cut(s)	54, 109, 212, 247, 887, 968, 1491, 1803
HpyF3I	CTNAG	3 cut(s)	428, 2274, 2578
HpySE526I	ACGT	8 cut(s)	54, 109, 212, 247, 887, 968, 1491, 1803
Hsp92I	GRCGYC	2 cut(s)	1491, 2558
Hsp92II	CATG	4 cut(s)	260, 1022, 1911, 2006
HspAI	GCGC	5 cut(s)	531, 634, 778, 1808, 2648
KflI	GGGWCCC	1 cut(s)	2619
Kpn2I	TCCGGA	1 cut(s)	1009
LguI	GCTCTTC	1 cut(s)	2446
LmnI	GCTCC	6 cut(s)	190, 442, 734, 957, 1130, 1683
LweI	GCATC	5 cut(s)	207, 1125, 1898, 2193, 2215
MaeI	CTAG	6 cut(s)	290, 1523, 1844, 2352, 2625, 2631
MaeII	ACGT	8 cut(s)	54, 109, 212, 247, 887, 968, 1491, 1803
MaeIII	GTNAC	3 cut(s)	268, 1492, 2526
MbiI	CCGCTC	1 cut(s)	16
MfeI	CAATTG	1 cut(s)	446
MflI	RGATCY	3 cut(s)	409, 803, 1394
MhlI	GDGCHC	4 cut(s)	352, 1035, 1869, 2275
MlsI	TGGCCA	1 cut(s)	2300
MluNI	TGGCCA	1 cut(s)	2300
MlyI	GAGTC	8 cut(s)	418, 515, 700, 743, 1610, 1928, 2491, 2570
MmeI	TCCRAC	5 cut(s)	516, 870, 1766, 2248, 2272
Mox20I	TGGCCA	1 cut(s)	2300
Mph1103I	ATGCAT	2 cut(s)	1891, 2208
MroI	TCCGGA	1 cut(s)	1009
MscI	TGGCCA	1 cut(s)	2300
MseI	TTAA	9 cut(s)	20, 47, 1118, 1770, 2151, 2244, 2261, 2316, 2393
Msp20I	TGGCCA	1 cut(s)	2300
MspA1I	CMGCKG	2 cut(s)	1593, 2671
MspI	CCGG	7 cut(s)	162, 627, 772, 1010, 2307, 2635, 2654
MunI	CAATTG	1 cut(s)	446
MvnI	CGCG	4 cut(s)	229, 531, 639, 704
NciI	CCSGG	4 cut(s)	163, 628, 2307, 2636
NlaIII	CATG	4 cut(s)	260, 1022, 1911, 2006
NmeAIII	GCCGAG	2 cut(s)	2184, 2485
NmuCI	GTSAC	3 cut(s)	268, 1492, 2526
NsiI	ATGCAT	2 cut(s)	1891, 2208
NspI	RCATGY	2 cut(s)	260, 2006
NspV	TTCGAA	1 cut(s)	1517
PaeI	GCATGC	1 cut(s)	260
PasI	CCCWGGG	1 cut(s)	2615
PceI	AGGCCT	2 cut(s)	1309, 2191
PciSI	GCTCTTC	1 cut(s)	2446
PfeI	GAWTC	5 cut(s)	219, 251, 1063, 1241, 2642
Pfl23II	CGTACG	1 cut(s)	969
PflFI	GACNNNGTC	1 cut(s)	2345
Ple19I	CGATCG	1 cut(s)	795
PleI	GAGTC	8 cut(s)	418, 515, 700, 742, 1609, 1927, 2491, 2570
PmaCI	CACGTG	2 cut(s)	213, 248
PmlI	CACGTG	2 cut(s)	213, 248
PpsI	GAGTC	8 cut(s)	418, 515, 700, 742, 1609, 1927, 2491, 2570
Ppu21I	YACGTR	3 cut(s)	213, 248, 969
PpuMI	RGGWCCY	1 cut(s)	2619
PshAI	GACNNNNGTC	1 cut(s)	1600
PsiI	TTATAA	1 cut(s)	9
Psp1406I	AACGTT	1 cut(s)	887
Psp5II	RGGWCCY	1 cut(s)	2619
PspCI	CACGTG	2 cut(s)	213, 248
PspLI	CGTACG	1 cut(s)	969
PspPPI	RGGWCCY	1 cut(s)	2619
PsuI	RGATCY	3 cut(s)	409, 803, 1394
PsyI	GACNNNGTC	1 cut(s)	2345
PvuI	CGATCG	1 cut(s)	795
PvuII	CAGCTG	1 cut(s)	2671
RsaI	GTAC	4 cut(s)	126, 971, 1082, 1142
RsaNI	GTAC	4 cut(s)	125, 970, 1081, 1141
SalI	GTCGAC	2 cut(s)	40, 111
SapI	GCTCTTC	1 cut(s)	2446
SaqAI	TTAA	9 cut(s)	20, 47, 1118, 1770, 2151, 2244, 2261, 2316, 2393
SchI	GAGTC	8 cut(s)	418, 515, 700, 743, 1610, 1928, 2491, 2570
SduI	GDGCHC	4 cut(s)	352, 1035, 1869, 2275
SfaNI	GCATC	5 cut(s)	207, 1125, 1898, 2193, 2215
SfcI	CTRYAG	2 cut(s)	760, 1650
SfuI	TTCGAA	1 cut(s)	1517
SgrDI	CGTCGACG	1 cut(s)	111
SinI	GGWCC	8 cut(s)	658, 892, 899, 994, 1247, 1318, 1712, 2619
SmlI	CTYRAG	1 cut(s)	650
SmoI	CTYRAG	1 cut(s)	650
SphI	GCATGC	1 cut(s)	260
SseBI	AGGCCT	2 cut(s)	1309, 2191
SspMI	CTAG	6 cut(s)	290, 1523, 1844, 2352, 2625, 2631
StuI	AGGCCT	2 cut(s)	1309, 2191
StyI	CCWWGG	2 cut(s)	871, 1314
TaaI	ACNGT	7 cut(s)	25, 117, 575, 1054, 1098, 1229, 1322
TaiI	ACGT	8 cut(s)	57, 112, 215, 250, 890, 971, 1494, 1806
TaqII	GACCGA	1 cut(s)	2200
TatI	WGTACW	2 cut(s)	1080, 1140
TauI	GCSGC	5 cut(s)	558, 639, 726, 729, 1835
TfiI	GAWTC	5 cut(s)	219, 251, 1063, 1241, 2642
Tru1I	TTAA	9 cut(s)	20, 47, 1118, 1770, 2151, 2244, 2261, 2316, 2393
Tru9I	TTAA	9 cut(s)	20, 47, 1118, 1770, 2151, 2244, 2261, 2316, 2393
TscAI	CASTG	5 cut(s)	242, 996, 1234, 1827, 2469
TseFI	GTSAC	3 cut(s)	268, 1492, 2526
Tsp45I	GTSAC	3 cut(s)	268, 1492, 2526
TspDTI	ATGAA	5 cut(s)	615, 1035, 1254, 1848, 2439
TspRI	CASTG	5 cut(s)	242, 996, 1234, 1827, 2469
Tth111I	GACNNNGTC	1 cut(s)	2345
VpaK11BI	GGWCC	8 cut(s)	658, 892, 899, 994, 1247, 1318, 1712, 2619
XapI	RAATTY	5 cut(s)	1204, 1213, 1285, 2212, 2458
XceI	RCATGY	2 cut(s)	260, 2006
XmiI	GTMKAC	3 cut(s)	41, 112, 1270
XspI	CTAG	6 cut(s)	290, 1523, 1844, 2352, 2625, 2631
ZraI	GACGTC	1 cut(s)	1492
Zsp2I	ATGCAT	2 cut(s)	1891, 2208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.