pycom05g19510

Bystin

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
22439601 .. 22442818
3218 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g19510.8

Sequence Viewer

Length: 1374 bp
ATGGGGAAGAAGAGGCAGAGAGAGAGGCACCAGAATCCGGAGCCGTTCCTCGCCGAAGAAAATGGCTCCGTCGTCTCAAAGAAGCGGACCAAGTCGAAGCAGCACCAGCAGGAGGATAAGCTCATATCTTCCGGCATGAGCTCCAAGATCCTCAAACAGGCTCTGGCTCAGCAGAGGGAGATAGAGGACGAGGAGAACCGCGCTCAAAACCCTAACAATTCGCTTCTGGATGTATCGGAAGAGCCGCGGAAGGATGTGGCCGACGGCGAAGAGGAGGATATCGATGATTTCGGTGGATTCTCTGAAACGCAGAGCCGATTTGACGGTTATGAAGAAAGTGATGAACATGGCGAGAAGCCATTACATGAGATTGATGAACATGATGAGAAAATATTGGAGCAATTCTTGTCAAAGGATGCCGGTCCGCAGCGTACTCTGGCAGACCTCATTGTCGCAAGAATTAAAGAGAACGATTCAAATGTTGGCTCAGATGTGAGGCCTCTGCCTAAATTGGATACCTCTGTCATAGATTTGTATAAGGGGGTTGGCAAGTTTCTTAATAAGTACACTGCTGGAAAGATTCCCAAGGCATTCAAACACATCCCTTCAGTGCCACGATGGGAGGATGTCCTATATTTGACTGAGCCTGAGAATTGGTCACCAAATGCAATGTATCAAGCTACGAGAATTTTTGCTTCCAATTTGGGTAAGGAGAAGGTAGAACGTTTCTACAAGCTTGTGTTGCTCCCAAGGGTGAGGGAAGACATCAGCAAGCACAAGCGCTTGCATTTTGCACTATATCAATCTTTGAAGAAGTCTTTGTACAAGCCTGCTGCCTTTTTTATAGGAATACTGTTTCCCTTGTGTGAGTCAGGGACATGTAATCTAAGAGAAGCTGTTATTTTTGGGAGCATTATACAGAAGGTCTCCATTCCTCCACTTCATTCTAGTGTTGCATTAATGAAGCTTGCAGAAATGAAATACTGTGGCACAACGAGTTATTTTATAAAGCTTCTTTTGGATAAAAAGTATGCCTTGCCATATCGCGTACTCGATGCTCTTGTTGCACATTTTATGAGATTTATGGAGGAAACAAGAGTAATGCCTGTGATATGGCACCAGTCACTTCTTACATTTGTGCAAAGGTACAAAAATGAATTGCAAAAGGAGGATAAGGATAATCTCAGAAATCTTCTTGAAACGCAAAAACACTATTTGGTAACCCCTGAAATAAGAAGGGAACTAGAAAATAGCCGCAATCGTGGTGAGAAAGAGGATGATCTCATGTCAATTGATATCCTTTTTGCTTTGTACTATTTGTTTAACAATAGTCAAATTTTTTTCTCTTTTTCTGTATTGCATCTGAAAACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

458

Amino Acids

53.04

Weight (kDa)

6.7

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1007
AasI GACNNNNNNGTC 1 cut(s) 449
AccB1I GGYRCC 2 cut(s) 27, 1116
AccII CGCG 3 cut(s) 201, 247, 1047
AccIII TCCGGA 1 cut(s) 37
AciI CCGC 6 cut(s) 85, 199, 245, 247, 425, 1255
AclI AACGTT 1 cut(s) 724
AclWI GGATC 1 cut(s) 142
AcoI YGGCCR 1 cut(s) 258
AcsI RAATTY 2 cut(s) 687, 1335
AcuI CTGAAG 1 cut(s) 591
AfaI GTAC 6 cut(s) 433, 566, 824, 1050, 1148, 1313
AfeI AGCGCT 1 cut(s) 782
AfiI CCNNNNNNNGG 3 cut(s) 37, 112, 157
AflIII ACRYGT 1 cut(s) 878
AgsI TTSAA 4 cut(s) 477, 595, 811, 1199
AluBI AGCT 7 cut(s) 121, 141, 680, 736, 896, 967, 1012
AluI AGCT 7 cut(s) 121, 141, 680, 736, 896, 967, 1012
Alw21I GWGCWC 1 cut(s) 143
Alw26I GTCTC 2 cut(s) 79, 931
AlwI GGATC 1 cut(s) 142
AlwNI CAGNNNCTG 1 cut(s) 163
Aor13HI TCCGGA 1 cut(s) 37
Aor51HI AGCGCT 1 cut(s) 782
AoxI GGCC 2 cut(s) 258, 497
ApeKI GCWGC 3 cut(s) 100, 427, 833
ApoI RAATTY 2 cut(s) 687, 1335
AseI ATTAAT 1 cut(s) 959
AspLEI GCGC 2 cut(s) 203, 783
AspS9I GGNCC 2 cut(s) 87, 422
AsuHPI GGTGA 3 cut(s) 651, 766, 1277
AvaII GGWCC 2 cut(s) 87, 422
BaeI ACNNNNGTAYC 2 cut(s) 507, 540
BanI GGYRCC 2 cut(s) 27, 1116
BanII GRGCYC 1 cut(s) 143
BarI GAAGNNNNNNTAC 2 cut(s) 806, 838
BbsI GAAGAC 1 cut(s) 768
Bbv12I GWGCWC 1 cut(s) 143
BbvI GCAGC 3 cut(s) 112, 439, 820
BccI CCATC 1 cut(s) 612
BceAI ACGGC 2 cut(s) 28, 280
BciVI GTATCC 1 cut(s) 508
BcoDI GTCTC 2 cut(s) 79, 931
BfaI CTAG 2 cut(s) 948, 1244
BfoI RGCGCY 1 cut(s) 784
BfuI GTATCC 1 cut(s) 508
BisI GCNGC 5 cut(s) 101, 245, 428, 834, 1255
BlpI GCTNAGC 1 cut(s) 168
BlsI GCNGC 5 cut(s) 102, 246, 429, 835, 1256
Bme18I GGWCC 2 cut(s) 87, 422
BmgT120I GGNCC 2 cut(s) 87, 422
BmiI GGNNCC 4 cut(s) 29, 42, 67, 1118
BmsI GCATC 3 cut(s) 406, 1045, 1369
BpiI GAAGAC 1 cut(s) 768
Bpu1102I GCTNAGC 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 282
BsaI GGTCTC 1 cut(s) 931
BsaJI CCNNGG 3 cut(s) 245, 585, 749
BsaWI WCCGGW 1 cut(s) 37
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 112, 157
Bse118I RCCGGY 1 cut(s) 419
Bse1I ACTGG 1 cut(s) 1120
Bse3DI GCAATG 1 cut(s) 675
BseAI TCCGGA 1 cut(s) 37
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 3 cut(s) 245, 585, 749
BseGI GGATG 6 cut(s) 235, 259, 421, 600, 631, 1282
BseLI CCNNNNNNNGG 3 cut(s) 37, 112, 157
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 5 cut(s) 182, 501, 633, 639, 1198
BseNI ACTGG 1 cut(s) 1120
BseRI GAGGAG 2 cut(s) 206, 287
BseXI GCAGC 3 cut(s) 112, 439, 820
Bsh1236I CGCG 3 cut(s) 201, 247, 1047
BshFI GGCC 2 cut(s) 260, 499
BshNI GGYRCC 2 cut(s) 27, 1116
BshVI ATCGAT 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 143
BsiSI CCGG 3 cut(s) 38, 132, 420
BslFI GGGAC 1 cut(s) 889
BslI CCNNNNNNNGG 3 cut(s) 37, 112, 157
BsmAI GTCTC 2 cut(s) 79, 931
BsmBI CGTCTC 1 cut(s) 79
BsmFI GGGAC 1 cut(s) 889
BsmI GAATGC 1 cut(s) 590
BsnI GGCC 2 cut(s) 260, 499
Bso31I GGTCTC 1 cut(s) 931
Bsp1286I GDGCHC 1 cut(s) 143
Bsp13I TCCGGA 1 cut(s) 37
Bsp1407I TGTACA 1 cut(s) 822
Bsp143I GATC 2 cut(s) 147, 1279
Bsp1720I GCTNAGC 1 cut(s) 168
BspACI CCGC 6 cut(s) 85, 199, 245, 247, 425, 1255
BspANI GGCC 2 cut(s) 260, 499
BspCNI CTCAG 5 cut(s) 181, 500, 634, 640, 1197
BspDI ATCGAT 1 cut(s) 282
BspEI TCCGGA 1 cut(s) 37
BspFNI CGCG 3 cut(s) 201, 247, 1047
BspLI GGNNCC 4 cut(s) 29, 42, 67, 1118
BspPI GGATC 1 cut(s) 142
BspQI GCTCTTC 1 cut(s) 234
BspT107I GGYRCC 2 cut(s) 27, 1116
BspTNI GGTCTC 1 cut(s) 931
BsrDI GCAATG 1 cut(s) 675
BsrFI RCCGGY 1 cut(s) 419
BsrGI TGTACA 1 cut(s) 822
BsrI ACTGG 1 cut(s) 1120
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 3 cut(s) 245, 585, 749
BssMI GATC 2 cut(s) 147, 1279
BssT1I CCWWGG 2 cut(s) 585, 749
Bst4CI ACNGT 3 cut(s) 326, 855, 986
Bst6I CTCTTC 3 cut(s) 5, 234, 264
BstAUI TGTACA 1 cut(s) 822
BstC8I GCNNGC 4 cut(s) 773, 785, 831, 969
BstDEI CTNAG 6 cut(s) 168, 487, 642, 648, 887, 1184
BstDSI CCRYGG 1 cut(s) 245
BstEII GGTNACC 2 cut(s) 657, 1219
BstENI CCTNNNNNAGG 1 cut(s) 155
BstF5I GGATG 6 cut(s) 235, 259, 421, 600, 631, 1282
BstFNI CGCG 3 cut(s) 201, 247, 1047
BstH2I RGCGCY 1 cut(s) 784
BstHHI GCGC 2 cut(s) 203, 783
BstKTI GATC 2 cut(s) 150, 1282
BstMAI GTCTC 2 cut(s) 79, 931
BstMBI GATC 2 cut(s) 147, 1279
BstMWI GCNNNNNNNGC 3 cut(s) 106, 742, 1064
BstNSI RCATGY 1 cut(s) 882
BstPI GGTNACC 2 cut(s) 657, 1219
BstUI CGCG 3 cut(s) 201, 247, 1047
BstV1I GCAGC 3 cut(s) 112, 439, 820
BstV2I GAAGAC 1 cut(s) 768
BstX2I RGATCY 1 cut(s) 147
BstYI RGATCY 1 cut(s) 147
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 1 cut(s) 508
BsuRI GGCC 2 cut(s) 260, 499
BsuTUI ATCGAT 1 cut(s) 282
BtgI CCRYGG 1 cut(s) 245
BtsCI GGATG 6 cut(s) 235, 259, 421, 600, 631, 1282
BtsI GCAGTG 1 cut(s) 567
BtsIMutI CAGTG 2 cut(s) 567, 615
Cac8I GCNNGC 4 cut(s) 773, 785, 831, 969
CaiI CAGNNNCTG 1 cut(s) 163
CfoI GCGC 2 cut(s) 203, 783
Cfr10I RCCGGY 1 cut(s) 419
Cfr13I GGNCC 2 cut(s) 87, 422
Cfr42I CCGCGG 1 cut(s) 248
ClaI ATCGAT 1 cut(s) 282
CpoI CGGWCCG 1 cut(s) 422
Csp6I GTAC 6 cut(s) 432, 565, 823, 1049, 1147, 1312
CspI CGGWCCG 1 cut(s) 422
CviAII CATG 6 cut(s) 136, 347, 365, 380, 879, 1285
CviQI GTAC 6 cut(s) 432, 565, 823, 1049, 1147, 1312
DdeI CTNAG 6 cut(s) 168, 487, 642, 648, 887, 1184
DpnI GATC 2 cut(s) 149, 1281
DpnII GATC 2 cut(s) 147, 1279
DrdI GACNNNNNNGTC 1 cut(s) 449
DseDI GACNNNNNNGTC 1 cut(s) 449
EaeI YGGCCR 1 cut(s) 258
Eam1104I CTCTTC 3 cut(s) 5, 234, 264
EarI CTCTTC 3 cut(s) 5, 234, 264
Ecl136II GAGCTC 1 cut(s) 141
Eco130I CCWWGG 2 cut(s) 585, 749
Eco147I AGGCCT 1 cut(s) 499
Eco24I GRGCYC 1 cut(s) 143
Eco31I GGTCTC 1 cut(s) 931
Eco32I GATATC 2 cut(s) 280, 1297
Eco47I GGWCC 2 cut(s) 87, 422
Eco47III AGCGCT 1 cut(s) 782
Eco53kI GAGCTC 1 cut(s) 141
Eco57I CTGAAG 1 cut(s) 591
Eco91I GGTNACC 2 cut(s) 657, 1219
EcoICRI GAGCTC 1 cut(s) 141
EcoNI CCTNNNNNAGG 1 cut(s) 155
EcoO65I GGTNACC 2 cut(s) 657, 1219
EcoRV GATATC 2 cut(s) 280, 1297
EcoT14I CCWWGG 2 cut(s) 585, 749
EcoT38I GRGCYC 1 cut(s) 143
ErhI CCWWGG 2 cut(s) 585, 749
Esp3I CGTCTC 1 cut(s) 79
FaeI CATG 6 cut(s) 139, 350, 368, 383, 882, 1288
FalI AAGNNNNNCTT 2 cut(s) 1019, 1051
FaqI GGGAC 1 cut(s) 889
FatI CATG 6 cut(s) 135, 346, 364, 379, 878, 1284
Fnu4HI GCNGC 5 cut(s) 101, 245, 428, 834, 1255
FokI GGATG 6 cut(s) 242, 266, 428, 587, 638, 1289
FriOI GRGCYC 1 cut(s) 143
Fsp4HI GCNGC 5 cut(s) 101, 245, 428, 834, 1255
FspBI CTAG 2 cut(s) 948, 1244
GlaI GCGC 2 cut(s) 202, 782
GluI GCNGC 5 cut(s) 101, 245, 428, 834, 1255
HaeII RGCGCY 1 cut(s) 784
HaeIII GGCC 2 cut(s) 260, 499
HapII CCGG 3 cut(s) 38, 132, 420
HhaI GCGC 2 cut(s) 203, 783
Hin1II CATG 6 cut(s) 139, 350, 368, 383, 882, 1288
Hin6I GCGC 2 cut(s) 201, 781
HinP1I GCGC 2 cut(s) 201, 781
HindIII AAGCTT 3 cut(s) 734, 965, 1010
HinfI GANTC 5 cut(s) 34, 297, 473, 580, 869
HpaII CCGG 3 cut(s) 38, 132, 420
HphI GGTGA 3 cut(s) 651, 766, 1277
Hpy166II GTNNAC 1 cut(s) 567
Hpy188I TCNGA 5 cut(s) 238, 304, 490, 1187, 1365
Hpy188III TCNNGA 3 cut(s) 38, 227, 1196
Hpy8I GTNNAC 1 cut(s) 567
Hpy99I CGWCG 2 cut(s) 74, 266
HpyAV CCTTC 5 cut(s) 244, 615, 709, 916, 1230
HpyCH4III ACNGT 3 cut(s) 326, 855, 986
HpyCH4IV ACGT 2 cut(s) 724, 1370
HpyCH4V TGCA 9 cut(s) 668, 787, 794, 956, 971, 1067, 1141, 1162, 1360
HpyF10VI GCNNNNNNNGC 3 cut(s) 106, 742, 1064
HpyF3I CTNAG 6 cut(s) 168, 487, 642, 648, 887, 1184
HpySE526I ACGT 2 cut(s) 724, 1370
Hsp92II CATG 6 cut(s) 139, 350, 368, 383, 882, 1288
HspAI GCGC 2 cut(s) 201, 781
Kpn2I TCCGGA 1 cut(s) 37
KspI CCGCGG 1 cut(s) 248
Kzo9I GATC 2 cut(s) 147, 1279
LguI GCTCTTC 1 cut(s) 234
LmnI GCTCC 6 cut(s) 40, 71, 146, 397, 750, 909
Lsp1109I GCAGC 3 cut(s) 112, 439, 820
LweI GCATC 3 cut(s) 406, 1045, 1369
MaeI CTAG 2 cut(s) 948, 1244
MaeII ACGT 2 cut(s) 724, 1370
MaeIII GTNAC 3 cut(s) 657, 1122, 1219
MalI GATC 2 cut(s) 149, 1281
MboI GATC 2 cut(s) 147, 1279
MfeI CAATTG 1 cut(s) 1290
MflI RGATCY 1 cut(s) 147
MhlI GDGCHC 1 cut(s) 143
MlyI GAGTC 1 cut(s) 878
MroI TCCGGA 1 cut(s) 37
MseI TTAA 4 cut(s) 462, 558, 959, 1323
MslI CAYNNNNRTG 1 cut(s) 948
MspA1I CMGCKG 1 cut(s) 247
MspI CCGG 3 cut(s) 38, 132, 420
MunI CAATTG 1 cut(s) 1290
Mva1269I GAATGC 1 cut(s) 590
MvnI CGCG 3 cut(s) 201, 247, 1047
MwoI GCNNNNNNNGC 3 cut(s) 106, 742, 1064
NdeII GATC 2 cut(s) 147, 1279
NlaIII CATG 6 cut(s) 139, 350, 368, 383, 882, 1288
NlaIV GGNNCC 4 cut(s) 29, 42, 67, 1118
NmuCI GTSAC 2 cut(s) 657, 1122
NspI RCATGY 1 cut(s) 882
PceI AGGCCT 1 cut(s) 499
PciI ACATGT 1 cut(s) 878
PciSI GCTCTTC 1 cut(s) 234
PctI GAATGC 1 cut(s) 590
PfeI GAWTC 4 cut(s) 34, 297, 473, 580
PflFI GACNNNGTC 1 cut(s) 91
PkrI GCNGC 5 cut(s) 102, 246, 429, 835, 1256
PleI GAGTC 1 cut(s) 877
PpsI GAGTC 1 cut(s) 877
PscI ACATGT 1 cut(s) 878
PshBI ATTAAT 1 cut(s) 959
PsiI TTATAA 1 cut(s) 1007
Psp124BI GAGCTC 1 cut(s) 143
Psp1406I AACGTT 1 cut(s) 724
PspEI GGTNACC 2 cut(s) 657, 1219
PspN4I GGNNCC 4 cut(s) 29, 42, 67, 1118
PspPI GGNCC 2 cut(s) 87, 422
PstNI CAGNNNCTG 1 cut(s) 163
PsuI RGATCY 1 cut(s) 147
PsyI GACNNNGTC 1 cut(s) 91
RsaI GTAC 6 cut(s) 433, 566, 824, 1050, 1148, 1313
RsaNI GTAC 6 cut(s) 432, 565, 823, 1049, 1147, 1312
RseI CAYNNNNRTG 1 cut(s) 948
Rsr2I CGGWCCG 1 cut(s) 422
RsrII CGGWCCG 1 cut(s) 422
SacI GAGCTC 1 cut(s) 143
SacII CCGCGG 1 cut(s) 248
SapI GCTCTTC 1 cut(s) 234
SaqAI TTAA 4 cut(s) 462, 558, 959, 1323
SatI GCNGC 5 cut(s) 101, 245, 428, 834, 1255
Sau3AI GATC 2 cut(s) 147, 1279
Sau96I GGNCC 2 cut(s) 87, 422
SchI GAGTC 1 cut(s) 878
SduI GDGCHC 1 cut(s) 143
SfaNI GCATC 3 cut(s) 406, 1045, 1369
Sfr303I CCGCGG 1 cut(s) 248
SgrBI CCGCGG 1 cut(s) 248
SinI GGWCC 2 cut(s) 87, 422
SmiMI CAYNNNNRTG 1 cut(s) 948
SseBI AGGCCT 1 cut(s) 499
SsiI CCGC 6 cut(s) 85, 199, 245, 247, 425, 1255
SspI AATATT 1 cut(s) 393
SspMI CTAG 2 cut(s) 948, 1244
SstI GAGCTC 1 cut(s) 143
StuI AGGCCT 1 cut(s) 499
StyI CCWWGG 2 cut(s) 585, 749
TaaI ACNGT 3 cut(s) 326, 855, 986
TaiI ACGT 2 cut(s) 727, 1373
TaqI TCGA 3 cut(s) 95, 282, 1053
TatI WGTACW 3 cut(s) 564, 822, 1311
TauI GCSGC 2 cut(s) 247, 1257
TfiI GAWTC 4 cut(s) 34, 297, 473, 580
Tru1I TTAA 4 cut(s) 462, 558, 959, 1323
Tru9I TTAA 4 cut(s) 462, 558, 959, 1323
TscAI CASTG 2 cut(s) 574, 615
TseFI GTSAC 2 cut(s) 657, 1122
TseI GCWGC 3 cut(s) 100, 427, 833
Tsp45I GTSAC 2 cut(s) 657, 1122
TspDTI ATGAA 7 cut(s) 345, 357, 390, 932, 977, 992, 1170
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 2 cut(s) 574, 615
Tth111I GACNNNGTC 1 cut(s) 91
VpaK11BI GGWCC 2 cut(s) 87, 422
VspI ATTAAT 1 cut(s) 959
XagI CCTNNNNNAGG 1 cut(s) 155
XapI RAATTY 2 cut(s) 687, 1335
XceI RCATGY 1 cut(s) 882
XspI CTAG 2 cut(s) 948, 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.