Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Forward (+)

422845 .. 425683

Gene Structure 2839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGCGTTAAAAGTCCTTTCTGCTCTTGACACGGCGAAGACGCAGTGGTACCATTTCAAGGCCATCATCGTCGCCGGCATGGGCCTCTTCACTGACGCCTACGACCTCTTCTGCATCCCTCCCATCTTGCGACTCCTCGGCCGCGTCTACTACCAGAAAGACCGAATCTTCCGAGACCAATTCTTCGACAACGACGACAAGAACTTCTTCGTTCGCACTGATATGGCTGCGGTGCTCTTGTGCGTCTCTCTCCTGGGAACCGTCATCGGACAGCTCGTCTTCGGAAGACTAGGGGACCGAATCGGAAGGCGCCGCGTGTACGGGCTGGCCCTGATGGTGATGGTGCTCAGCGCCCTAGGATGCGGCTTCTCCGTGTGCACGTCGCCGGGCTGCGTTCTGGTGAGTCTTGGGTTCTTTAGGTTCATGCTGGGGATCGGGATCGGAGGGGACTATCCGCTCTCGGCCACCATCATGTCGGAGTTTGCCAACAAGAGGACACGCGGTTCGTTCATAGCAGCCGTGTTTTCCATGCAAGGGTTTGGGATTCTGGCTAGTTCCCTCGTGACGATGACGGTGTGCGGGATCTTCGACGGAGTGTCGAATGCGAAGGGGAAGGACAAGACTCCCAGCCAAGCTGACGTCGCATGGAGGCTGATACTGATGCTGGGCGCCATTCCTGCTGCCATGACGTATTATTGGCGTATGATGATGCCTGAAACTGCCAGATATACAGCACTGGTTGAGCTAAATGTCCTCCAAGCGGCAAAGGACATGGAGAAAGTGTTGGATGTCTCAATGAGTCAAATTGTAGAAGATGAATCATTGTCATTGCCACAAGATCCACCATCCTATCCCCTTCTCTCCAAGCAATTTTTACGTCTCCACGGCCGGGATCTCTTCGCTTGTTCTGCTTCATGGTTTCTTGTCGATGTTGTCTTCTACAGCAGCAACCTTTTCCAATCTCAAGTATATGGAAAATTCCTCCCGAAAAAATACAAGGTCAACGCCTATCAAGATGCTCTATTTGTTGCACTGCTGCAAGCCATAGTTGCAATGTGCTCAACAATTCCAGGTTACTGGTTCACTGTCTACTTCATCGATCGAATTGGAAGACGCAAAATCCAAATGATGGGTTTTCTTGCCATGGCATTGGTTTATTTCGCGCTAGGGATACCCTACAAGTTTTATTGGGTAAATCATGTCGATGCAGGCTTCATGGTCCTCTACGGCCTCACTTTCTTCTTCGCAAATTTTGGACCAAACACCACTACTTTTATAGTGCCTGCTGAACTTTTTCCGGCACGATTCAGATCGACTTGTCATGGGATATCAGGGGCTGCTGGGAAGGTTGGGGCCATTGTTGGAGTTATAGGGTTTGCGTTAGTCTCACATGGTAAAACAGAGGAGCATCCGGTAGAGATGACGGTCACATTGGTAATTTTGGGCGGAGTTTGCATTTTGGGAACGATGGTAACGTATTTTTTCACACCCGAAACCAATTGCAAATCACTAGAAGAGAATGAGGAATATGATGAAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

514

Amino Acids

57.02

Weight (kDa)

8.18

Isoelectric Point (pI)

30.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	24 - 508	3.9e-47	Sugar (and other) transporter
MFS_1	PF07690	75 - 455	1e-26	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	642
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	3 cut(s)	48, 309, 668
AccB7I	CCANNNNNTGG	1 cut(s)	1129
AccBSI	CCGCTC	1 cut(s)	457
AccI	GTMKAC	2 cut(s)	147, 1089
AccII	CGCG	4 cut(s)	144, 315, 501, 1163
AciI	CCGC	9 cut(s)	142, 230, 313, 363, 455, 501, 579, 761, 1446
AclWI	GGATC	5 cut(s)	440, 446, 590, 833, 900
AcoI	YGGCCR	3 cut(s)	139, 462, 886
AcsI	RAATTY	2 cut(s)	977, 1249
AcyI	GRCGYC	4 cut(s)	96, 310, 639, 669
AfaI	GTAC	2 cut(s)	50, 320
AfiI	CCNNNNNNNGG	6 cut(s)	58, 492, 534, 760, 889, 1129
AgsI	TTSAA	1 cut(s)	58
AhdI	GACNNNNNGTC	2 cut(s)	275, 595
AjiI	CACGTC	1 cut(s)	381
AjnI	CCWGG	2 cut(s)	252, 1069
AloI	GAACNNNNNNTCC	2 cut(s)	487, 519
AluBI	AGCT	3 cut(s)	274, 635, 745
AluI	AGCT	3 cut(s)	274, 635, 745
Alw21I	GWGCWC	4 cut(s)	237, 348, 380, 1061
Alw26I	GTCTC	5 cut(s)	168, 250, 796, 884, 1390
Alw44I	GTGCAC	1 cut(s)	376
AlwI	GGATC	5 cut(s)	440, 446, 590, 833, 900
AlwNI	CAGNNNCTG	1 cut(s)	1337
AoxI	GGCC	8 cut(s)	60, 82, 139, 327, 462, 886, 1228, 1353
ApaLI	GTGCAC	1 cut(s)	376
ApeKI	GCWGC	7 cut(s)	227, 390, 515, 680, 945, 1036, 1337
ApoI	RAATTY	2 cut(s)	977, 1249
ArsI	GACNNNNNNTTYG	4 cut(s)	167, 199, 487, 519
Asp700I	GAANNNNTTC	2 cut(s)	206, 1293
Asp718I	GGTACC	1 cut(s)	48
AspA2I	CCTAGG	1 cut(s)	355
AspLEI	GCGC	4 cut(s)	312, 353, 671, 1165
AspS9I	GGNCC	6 cut(s)	82, 295, 328, 1219, 1256, 1353
AsuC2I	CCSGG	2 cut(s)	387, 890
AsuHPI	GGTGA	2 cut(s)	349, 412
AvaII	GGWCC	3 cut(s)	295, 1219, 1256
AvrII	CCTAGG	1 cut(s)	355
BaeGI	GKGCMC	1 cut(s)	380
BanI	GGYRCC	3 cut(s)	48, 309, 668
BauI	CACGAG	1 cut(s)	560
BbsI	GAAGAC	5 cut(s)	44, 271, 292, 928, 1117
Bbv12I	GWGCWC	4 cut(s)	237, 348, 380, 1061
BbvI	GCAGC	7 cut(s)	214, 377, 527, 667, 957, 1023, 1324
BccI	CCATC	8 cut(s)	71, 131, 328, 334, 476, 853, 1123, 1462
BceAI	ACGGC	4 cut(s)	48, 503, 901, 1243
BciT130I	CCWGG	2 cut(s)	254, 1071
BciVI	GTATCC	1 cut(s)	1164
BcnI	CCSGG	2 cut(s)	387, 890
BcoDI	GTCTC	5 cut(s)	168, 250, 796, 884, 1390
BfaI	CTAG	5 cut(s)	290, 356, 552, 1166, 1511
BfmI	CTRYAG	1 cut(s)	940
BfoI	RGCGCY	3 cut(s)	313, 354, 672
BfuI	GTATCC	1 cut(s)	1164
BlnI	CCTAGG	1 cut(s)	355
BlpI	GCTNAGC	1 cut(s)	347
Bme1390I	CCNGG	4 cut(s)	254, 387, 890, 1071
Bme18I	GGWCC	3 cut(s)	295, 1219, 1256
BmeRI	GACNNNNNGTC	2 cut(s)	275, 595
BmgBI	CACGTC	1 cut(s)	381
BmgT120I	GGNCC	6 cut(s)	82, 295, 328, 1219, 1256, 1353
BmiI	GGNNCC	6 cut(s)	50, 259, 296, 311, 670, 1354
BmrFI	CCNGG	4 cut(s)	254, 387, 890, 1071
BmsI	GCATC	7 cut(s)	123, 350, 651, 699, 1006, 1195, 1417
BpiI	GAAGAC	5 cut(s)	44, 271, 292, 928, 1117
Bpu1102I	GCTNAGC	1 cut(s)	347
BpuEI	CTTGAG	1 cut(s)	948
BpuMI	CCSGG	2 cut(s)	387, 890
Bsa29I	ATCGAT	1 cut(s)	1098
BsaBI	GATNNNNATC	2 cut(s)	437, 1309
BsaHI	GRCGYC	4 cut(s)	96, 310, 639, 669
BsaI	GGTCTC	1 cut(s)	168
BsaJI	CCNNGG	5 cut(s)	136, 253, 355, 883, 1143
BsaWI	WCCGGW	1 cut(s)	1411
BsaXI	ACNNNNNCTCC	2 cut(s)	767, 797
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 492, 534, 760, 889, 1129
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	2 cut(s)	741, 1082
Bse3DI	GCAATG	2 cut(s)	827, 1059
Bse8I	GATNNNNATC	2 cut(s)	437, 1309
BseBI	CCWGG	2 cut(s)	254, 1071
BseCI	ATCGAT	1 cut(s)	1098
BseDI	CCNNGG	5 cut(s)	136, 253, 355, 883, 1143
BseGI	GGATG	5 cut(s)	114, 365, 793, 845, 1408
BseJI	GATNNNNATC	2 cut(s)	437, 1309
BseLI	CCNNNNNNNGG	6 cut(s)	58, 492, 534, 760, 889, 1129
BseMI	GCAATG	2 cut(s)	827, 1059
BseMII	CTCAG	1 cut(s)	361
BseNI	ACTGG	2 cut(s)	741, 1082
BseRI	GAGGAG	2 cut(s)	125, 1418
BseSI	GKGCMC	1 cut(s)	380
BseX3I	CGGCCG	2 cut(s)	139, 886
BseXI	GCAGC	7 cut(s)	214, 377, 527, 667, 957, 1023, 1324
BseYI	CCCAGC	4 cut(s)	427, 626, 664, 1340
Bsh1236I	CGCG	4 cut(s)	144, 315, 501, 1163
Bsh1285I	CGRYCG	3 cut(s)	142, 889, 1102
BshFI	GGCC	8 cut(s)	62, 84, 141, 329, 464, 888, 1230, 1355
BshNI	GGYRCC	3 cut(s)	48, 309, 668
BshVI	ATCGAT	1 cut(s)	1098
BsiEI	CGRYCG	3 cut(s)	142, 889, 1102
BsiHKAI	GWGCWC	4 cut(s)	237, 348, 380, 1061
BsiSI	CCGG	5 cut(s)	75, 386, 889, 1298, 1412
BslFI	GGGAC	2 cut(s)	308, 461
BslI	CCNNNNNNNGG	6 cut(s)	58, 492, 534, 760, 889, 1129
BsmAI	GTCTC	5 cut(s)	168, 250, 796, 884, 1390
BsmBI	CGTCTC	2 cut(s)	250, 884
BsmFI	GGGAC	2 cut(s)	308, 461
BsmI	GAATGC	1 cut(s)	607
BsnI	GGCC	8 cut(s)	62, 84, 141, 329, 464, 888, 1230, 1355
Bso31I	GGTCTC	1 cut(s)	168
Bsp1286I	GDGCHC	4 cut(s)	237, 348, 380, 1061
Bsp143I	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
Bsp1720I	GCTNAGC	1 cut(s)	347
Bsp19I	CCATGG	1 cut(s)	1143
BspACI	CCGC	9 cut(s)	142, 230, 313, 363, 455, 501, 579, 761, 1446
BspANI	GGCC	8 cut(s)	62, 84, 141, 329, 464, 888, 1230, 1355
BspCNI	CTCAG	1 cut(s)	360
BspDI	ATCGAT	1 cut(s)	1098
BspFNI	CGCG	4 cut(s)	144, 315, 501, 1163
BspLI	GGNNCC	6 cut(s)	50, 259, 296, 311, 670, 1354
BspPI	GGATC	5 cut(s)	440, 446, 590, 833, 900
BspT107I	GGYRCC	3 cut(s)	48, 309, 668
BspTNI	GGTCTC	1 cut(s)	168
BsrBI	CCGCTC	1 cut(s)	457
BsrDI	GCAATG	2 cut(s)	827, 1059
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	2 cut(s)	741, 1082
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	5 cut(s)	136, 253, 355, 883, 1143
BssMI	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
BssNI	GRCGYC	4 cut(s)	96, 310, 639, 669
BssSI	CACGAG	1 cut(s)	560
BssT1I	CCWWGG	2 cut(s)	355, 1143
Bst2BI	CACGAG	1 cut(s)	560
Bst2UI	CCWGG	2 cut(s)	254, 1071
Bst4CI	ACNGT	4 cut(s)	262, 574, 1087, 1426
Bst6I	CTCTTC	5 cut(s)	92, 113, 902, 1509, 1530
BstACI	GRCGYC	4 cut(s)	96, 310, 639, 669
BstC8I	GCNNGC	5 cut(s)	76, 327, 1041, 1210, 1284
BstDEI	CTNAG	1 cut(s)	347
BstDSI	CCRYGG	2 cut(s)	883, 1143
BstF5I	GGATG	5 cut(s)	114, 365, 793, 845, 1408
BstFNI	CGCG	4 cut(s)	144, 315, 501, 1163
BstH2I	RGCGCY	3 cut(s)	313, 354, 672
BstHHI	GCGC	4 cut(s)	312, 353, 671, 1165
BstKTI	GATC	7 cut(s)	435, 441, 585, 841, 895, 1102, 1313
BstMAI	GTCTC	5 cut(s)	168, 250, 796, 884, 1390
BstMBI	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
BstMCI	CGRYCG	3 cut(s)	142, 889, 1102
BstMWI	GCNNNNNNNGC	5 cut(s)	641, 677, 908, 1049, 1452
BstNI	CCWGG	2 cut(s)	254, 1071
BstSCI	CCNGG	4 cut(s)	252, 385, 888, 1069
BstSFI	CTRYAG	1 cut(s)	940
BstSLI	GKGCMC	1 cut(s)	380
BstUI	CGCG	4 cut(s)	144, 315, 501, 1163
BstV1I	GCAGC	7 cut(s)	214, 377, 527, 667, 957, 1023, 1324
BstV2I	GAAGAC	5 cut(s)	44, 271, 292, 928, 1117
BstX2I	RGATCY	3 cut(s)	582, 838, 892
BstXI	CCANNNNNNTGG	2 cut(s)	1077, 1150
BstYI	RGATCY	3 cut(s)	582, 838, 892
BstZI	CGGCCG	2 cut(s)	139, 886
Bsu15I	ATCGAT	1 cut(s)	1098
BsuI	GTATCC	1 cut(s)	1164
BsuRI	GGCC	8 cut(s)	62, 84, 141, 329, 464, 888, 1230, 1355
BsuTUI	ATCGAT	1 cut(s)	1098
BtgI	CCRYGG	2 cut(s)	883, 1143
BtrI	CACGTC	1 cut(s)	381
BtsCI	GGATG	5 cut(s)	114, 365, 793, 845, 1408
BtsI	GCAGTG	2 cut(s)	50, 1031
BtsIMutI	CAGTG	6 cut(s)	50, 90, 216, 734, 1031, 1083
Cac8I	GCNNGC	5 cut(s)	76, 327, 1041, 1210, 1284
CaiI	CAGNNNCTG	1 cut(s)	1337
CfoI	GCGC	4 cut(s)	312, 353, 671, 1165
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	6 cut(s)	82, 295, 328, 1219, 1256, 1353
ClaI	ATCGAT	1 cut(s)	1098
CseI	GACGC	5 cut(s)	49, 104, 133, 232, 1122
Csp6I	GTAC	2 cut(s)	49, 319
CviQI	GTAC	2 cut(s)	49, 319
DdeI	CTNAG	1 cut(s)	347
DinI	GGCGCC	2 cut(s)	311, 670
DpnI	GATC	7 cut(s)	434, 440, 584, 840, 894, 1101, 1312
DpnII	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
DriI	GACNNNNNGTC	2 cut(s)	275, 595
EaeI	YGGCCR	3 cut(s)	139, 462, 886
EagI	CGGCCG	2 cut(s)	139, 886
Eam1104I	CTCTTC	5 cut(s)	92, 113, 902, 1509, 1530
Eam1105I	GACNNNNNGTC	2 cut(s)	275, 595
EarI	CTCTTC	5 cut(s)	92, 113, 902, 1509, 1530
EciI	GGCGGA	1 cut(s)	1461
EclXI	CGGCCG	2 cut(s)	139, 886
Eco130I	CCWWGG	2 cut(s)	355, 1143
Eco31I	GGTCTC	1 cut(s)	168
Eco32I	GATATC	1 cut(s)	1329
Eco47I	GGWCC	3 cut(s)	295, 1219, 1256
Eco52I	CGGCCG	2 cut(s)	139, 886
EcoRII	CCWGG	2 cut(s)	252, 1069
EcoRV	GATATC	1 cut(s)	1329
EcoT14I	CCWWGG	2 cut(s)	355, 1143
EgeI	GGCGCC	2 cut(s)	311, 670
EheI	GGCGCC	2 cut(s)	311, 670
ErhI	CCWWGG	2 cut(s)	355, 1143
Esp3I	CGTCTC	2 cut(s)	250, 884
FalI	AAGNNNNNCTT	2 cut(s)	191, 223
FaqI	GGGAC	2 cut(s)	308, 461
FauI	CCCGC	1 cut(s)	572
FblI	GTMKAC	2 cut(s)	147, 1089
FokI	GGATG	5 cut(s)	101, 372, 800, 832, 1395
FspBI	CTAG	5 cut(s)	290, 356, 552, 1166, 1511
GlaI	GCGC	4 cut(s)	311, 352, 670, 1164
GsaI	CCCAGC	4 cut(s)	431, 630, 668, 1344
HaeII	RGCGCY	3 cut(s)	313, 354, 672
HaeIII	GGCC	8 cut(s)	62, 84, 141, 329, 464, 888, 1230, 1355
HapII	CCGG	5 cut(s)	75, 386, 889, 1298, 1412
HgaI	GACGC	5 cut(s)	49, 104, 133, 232, 1122
HhaI	GCGC	4 cut(s)	312, 353, 671, 1165
Hin1I	GRCGYC	4 cut(s)	96, 310, 639, 669
Hin6I	GCGC	4 cut(s)	310, 351, 669, 1163
HinP1I	GCGC	4 cut(s)	310, 351, 669, 1163
HincII	GTYRAC	1 cut(s)	1003
HindII	GTYRAC	1 cut(s)	1003
HinfI	GANTC	9 cut(s)	132, 165, 300, 403, 544, 622, 799, 818, 1305
HpaII	CCGG	5 cut(s)	75, 386, 889, 1298, 1412
HphI	GGTGA	2 cut(s)	349, 412
Hpy166II	GTNNAC	6 cut(s)	148, 319, 378, 1003, 1083, 1090
Hpy188I	TCNGA	7 cut(s)	173, 269, 284, 305, 443, 478, 1310
Hpy188III	TCNNGA	5 cut(s)	26, 436, 562, 985, 1013
Hpy8I	GTNNAC	6 cut(s)	148, 319, 378, 1003, 1083, 1090
Hpy99I	CGWCG	5 cut(s)	74, 197, 385, 593, 644
HpyAV	CCTTC	5 cut(s)	300, 601, 607, 866, 1339
HpyCH4III	ACNGT	4 cut(s)	262, 574, 1087, 1426
HpyCH4IV	ACGT	5 cut(s)	380, 639, 689, 877, 1475
HpyCH4V	TGCA	9 cut(s)	114, 378, 532, 1031, 1039, 1052, 1208, 1455, 1503
HpyF10VI	GCNNNNNNNGC	5 cut(s)	641, 677, 908, 1049, 1452
HpyF3I	CTNAG	1 cut(s)	347
HpySE526I	ACGT	5 cut(s)	380, 639, 689, 877, 1475
Hsp92I	GRCGYC	4 cut(s)	96, 310, 639, 669
HspAI	GCGC	4 cut(s)	310, 351, 669, 1163
KasI	GGCGCC	2 cut(s)	309, 668
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
LmnI	GCTCC	1 cut(s)	1405
Lsp1109I	GCAGC	7 cut(s)	214, 377, 527, 667, 957, 1023, 1324
LweI	GCATC	7 cut(s)	123, 350, 651, 699, 1006, 1195, 1417
MaeI	CTAG	5 cut(s)	290, 356, 552, 1166, 1511
MaeII	ACGT	5 cut(s)	380, 639, 689, 877, 1475
MaeIII	GTNAC	4 cut(s)	562, 1073, 1426, 1471
MalI	GATC	7 cut(s)	434, 440, 584, 840, 894, 1101, 1312
MbiI	CCGCTC	1 cut(s)	457
MboI	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
MfeI	CAATTG	1 cut(s)	1498
MflI	RGATCY	3 cut(s)	582, 838, 892
MhlI	GDGCHC	4 cut(s)	237, 348, 380, 1061
MluCI	AATT	9 cut(s)	179, 804, 869, 977, 1065, 1104, 1249, 1437, 1498
Mly113I	GGCGCC	2 cut(s)	310, 669
MlyI	GAGTC	4 cut(s)	126, 412, 616, 808
MmeI	TCCRAC	3 cut(s)	456, 765, 1342
MroNI	GCCGGC	1 cut(s)	74
MroXI	GAANNNNTTC	2 cut(s)	206, 1293
MseI	TTAA	1 cut(s)	8
MslI	CAYNNNNRTG	3 cut(s)	221, 470, 1203
MspI	CCGG	5 cut(s)	75, 386, 889, 1298, 1412
MspR9I	CCNGG	4 cut(s)	254, 387, 890, 1071
MunI	CAATTG	1 cut(s)	1498
Mva1269I	GAATGC	1 cut(s)	607
MvaI	CCWGG	2 cut(s)	254, 1071
MvnI	CGCG	4 cut(s)	144, 315, 501, 1163
MwoI	GCNNNNNNNGC	5 cut(s)	641, 677, 908, 1049, 1452
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	2 cut(s)	310, 669
NciI	CCSGG	2 cut(s)	387, 890
NcoI	CCATGG	1 cut(s)	1143
NdeII	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	6 cut(s)	50, 259, 296, 311, 670, 1354
NmeAIII	GCCGAG	2 cut(s)	117, 440
NmuCI	GTSAC	2 cut(s)	562, 1426
PcsI	WCGNNNNNNNCGW	3 cut(s)	192, 273, 1472
PctI	GAATGC	1 cut(s)	607
PdiI	GCCGGC	1 cut(s)	76
PdmI	GAANNNNTTC	2 cut(s)	206, 1293
PfeI	GAWTC	5 cut(s)	165, 300, 544, 818, 1305
PflMI	CCANNNNNTGG	1 cut(s)	1129
Ple19I	CGATCG	1 cut(s)	1102
PleI	GAGTC	4 cut(s)	126, 411, 616, 807
PluTI	GGCGCC	2 cut(s)	313, 672
PpsI	GAGTC	4 cut(s)	126, 411, 616, 807
Psp6I	CCWGG	2 cut(s)	252, 1069
PspFI	CCCAGC	4 cut(s)	427, 626, 664, 1340
PspGI	CCWGG	2 cut(s)	252, 1069
PspN4I	GGNNCC	6 cut(s)	50, 259, 296, 311, 670, 1354
PspPI	GGNCC	6 cut(s)	82, 295, 328, 1219, 1256, 1353
PstNI	CAGNNNCTG	1 cut(s)	1337
PsuI	RGATCY	3 cut(s)	582, 838, 892
PvuI	CGATCG	1 cut(s)	1102
RsaI	GTAC	2 cut(s)	50, 320
RsaNI	GTAC	2 cut(s)	49, 319
RseI	CAYNNNNRTG	3 cut(s)	221, 470, 1203
SaqAI	TTAA	1 cut(s)	8
Sau3AI	GATC	7 cut(s)	432, 438, 582, 838, 892, 1099, 1310
Sau96I	GGNCC	6 cut(s)	82, 295, 328, 1219, 1256, 1353
SchI	GAGTC	4 cut(s)	126, 412, 616, 808
ScrFI	CCNGG	4 cut(s)	254, 387, 890, 1071
SduI	GDGCHC	4 cut(s)	237, 348, 380, 1061
SfaNI	GCATC	7 cut(s)	123, 350, 651, 699, 1006, 1195, 1417
SfcI	CTRYAG	1 cut(s)	940
SfoI	GGCGCC	2 cut(s)	311, 670
SinI	GGWCC	3 cut(s)	295, 1219, 1256
SmiMI	CAYNNNNRTG	3 cut(s)	221, 470, 1203
SmlI	CTYRAG	1 cut(s)	963
SmoI	CTYRAG	1 cut(s)	963
Sse9I	AATT	9 cut(s)	179, 804, 869, 977, 1065, 1104, 1249, 1437, 1498
SsiI	CCGC	9 cut(s)	142, 230, 313, 363, 455, 501, 579, 761, 1446
SspDI	GGCGCC	2 cut(s)	309, 668
SspMI	CTAG	5 cut(s)	290, 356, 552, 1166, 1511
StyD4I	CCNGG	4 cut(s)	252, 385, 888, 1069
StyI	CCWWGG	2 cut(s)	355, 1143
TaaI	ACNGT	4 cut(s)	262, 574, 1087, 1426
TaiI	ACGT	5 cut(s)	383, 642, 692, 880, 1478
TaqI	TCGA	8 cut(s)	186, 588, 599, 927, 1098, 1102, 1203, 1313
TaqII	GACCGA	2 cut(s)	177, 312
TasI	AATT	9 cut(s)	179, 804, 869, 977, 1065, 1104, 1249, 1437, 1498
TauI	GCSGC	4 cut(s)	144, 315, 366, 764
TfiI	GAWTC	5 cut(s)	165, 300, 544, 818, 1305
Tru1I	TTAA	1 cut(s)	8
Tru9I	TTAA	1 cut(s)	8
TscAI	CASTG	6 cut(s)	50, 97, 223, 741, 1038, 1090
TseFI	GTSAC	2 cut(s)	562, 1426
TseI	GCWGC	7 cut(s)	227, 390, 515, 680, 945, 1036, 1337
Tsp45I	GTSAC	2 cut(s)	562, 1426
TspDTI	ATGAA	6 cut(s)	412, 499, 831, 903, 1084, 1204
TspGWI	ACGGA	2 cut(s)	361, 606
TspRI	CASTG	6 cut(s)	50, 97, 223, 741, 1038, 1090
Van91I	CCANNNNNTGG	1 cut(s)	1129
VneI	GTGCAC	1 cut(s)	376
VpaK11BI	GGWCC	3 cut(s)	295, 1219, 1256
XapI	RAATTY	2 cut(s)	977, 1249
XmaJI	CCTAGG	1 cut(s)	355
XmiI	GTMKAC	2 cut(s)	147, 1089
XmnI	GAANNNNTTC	2 cut(s)	206, 1293
XspI	CTAG	5 cut(s)	290, 356, 552, 1166, 1511
ZraI	GACGTC	1 cut(s)	640

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.