Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Reverse (-)

36291361 .. 36294569

Gene Structure 3209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002561

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGCGCTGAAGGTGCTTTCCGCCCTTGACACGGCGAGGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTCTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACGACGACAACAACTTCGTAATCCCGGCGATAGTCGTTACCGCGCTGGTGGGCTTCCCTCTCCTCGGCACCGTCCTGGGGCAGCTGCTCTTCGGCAGGCTCGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGGTGATGGTGCTGAGCTCCATAGGGTGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGTCAGCCTCGTCTTCTTCCGGTTCCTCCTCGGCGTCGGCATCGGCGGAGACTACCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGACTGTGTTCTCCATGCAAGGGTTTGGGATTCTGGCGAGCTCTATAGTGACCATCGTGGTGTGCGTCGTCTTTAACGTTGCGAGCAAGCCGGATCCGAAGAAAGCGACACCGGACGAGGCTGACATAGCGTGGAGGTTGATACTCATGCTCGGTGCAATTCCGGCTGCCATGACGTACTATTGGAGGATGATGATGCCTGAAACTGCCAGGTATACAGCATTGGTTGAGCTAAATGTGAAGCAAGCAGCCAAGAACATGGAGAAAGTGCTGGATGTTCCCTTGAGTCAAATTGCAGAAGATGAACCAGATTTACTATCAATAGGGCAAAACCCTACACCATCATATCCCTTCTTCTCCAAGGAATTTTTAAGTCTCCATGGCCTCGATCTCTTCTCTTGTGCTGTCAACTGGTTTCTTGTTGATGTTATCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATATCGACAAAAAATACCCAAAATACAAGGTTAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAATATGCTCAACAATTCCAGGATATTGGTTCAGTGTCTTCTTCATTGATCGAATTGGAAGGCGAAAAATTCAAATGATGGGGTTTTTTGTCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAAAACACAGATGTAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACTACTTTTATAGTGCCTGCTGAGCTTTTCCCGGCGAGGTTTAGGTCAACTTGTCATGGGATTTCCGGGGCTTCGGGGAAGGTTGGCGCCTTGATCGGATCAATTGGATTTCTATGGGCTGCACATGGTCAAAACGAGGAGGATAAGACGAAGATCAAGAGGTCGTTGATTGGTTTAGGTGTAGTTTGTATTCTGGGATTGGTGGTAACGTATCTCTTCACACCCGAAACTAAGGGAAGATCACTAGAAGAGAATGAGAACGAGAATGGGAATGAACAAAATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

512

Amino Acids

56.83

Weight (kDa)

8.7

Isoelectric Point (pI)

26.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	23 - 502	1.9e-48	Sugar (and other) transporter
MFS_1	PF07690	30 - 449	5.3e-26	Major Facilitator Superfamily
MFS_1	PF07690	337 - 499	7.3e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	362
AasI	GACNNNNNNGTC	1 cut(s)	436
Acc36I	ACCTGC	1 cut(s)	362
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	3 cut(s)	48, 221, 1334
AccI	GTMKAC	2 cut(s)	282, 692
AccII	CGCG	1 cut(s)	197
AciI	CCGC	5 cut(s)	21, 142, 195, 327, 408
AclI	AACGTT	1 cut(s)	555
AclWI	GGATC	3 cut(s)	566, 579, 1354
AcoI	YGGCCR	1 cut(s)	139
AcsI	RAATTY	3 cut(s)	842, 1101, 1231
AcuI	CTGAAG	1 cut(s)	29
AcvI	CACGTG	1 cut(s)	464
AcyI	GRCGYC	3 cut(s)	96, 396, 1335
AfaI	GTAC	2 cut(s)	50, 656
AfiI	CCNNNNNNNGG	7 cut(s)	31, 58, 218, 231, 424, 456, 498
AflIII	ACRYGT	2 cut(s)	277, 461
AgsI	TTSAA	2 cut(s)	58, 1106
AjiI	CACGTC	1 cut(s)	278
AjnI	CCWGG	3 cut(s)	228, 686, 1051
AluBI	AGCT	5 cut(s)	238, 315, 519, 709, 1273
AluI	AGCT	5 cut(s)	238, 315, 519, 709, 1273
Alw21I	GWGCWC	2 cut(s)	317, 521
Alw26I	GTCTC	5 cut(s)	124, 268, 405, 857, 939
AlwI	GGATC	3 cut(s)	566, 579, 1354
Ama87I	CYCGRG	1 cut(s)	254
AoxI	GGCC	5 cut(s)	60, 82, 139, 859, 1210
ApeKI	GCWGC	6 cut(s)	235, 238, 644, 725, 918, 1367
ApoI	RAATTY	3 cut(s)	842, 1101, 1231
ArsI	GACNNNNNNTTYG	2 cut(s)	152, 184
Asp718I	GGTACC	1 cut(s)	48
AspLEI	GCGC	3 cut(s)	7, 199, 1337
AspS9I	GGNCC	4 cut(s)	82, 259, 1201, 1238
AsuC2I	CCSGG	3 cut(s)	179, 1280, 1315
AsuHPI	GGTGA	2 cut(s)	82, 313
AvaI	CYCGRG	1 cut(s)	254
AvaII	GGWCC	3 cut(s)	259, 1201, 1238
BamHI	GGATCC	1 cut(s)	571
BanI	GGYRCC	3 cut(s)	48, 221, 1334
BanII	GRGCYC	2 cut(s)	317, 521
BbrPI	CACGTG	1 cut(s)	464
BbsI	GAAGAC	2 cut(s)	367, 1063
Bbv12I	GWGCWC	2 cut(s)	317, 521
BbvI	GCAGC	6 cut(s)	225, 247, 631, 737, 930, 1354
BccI	CCATC	9 cut(s)	71, 131, 292, 298, 344, 440, 539, 826, 1105
BceAI	ACGGC	1 cut(s)	48
BciT130I	CCWGG	3 cut(s)	230, 688, 1053
BciVI	GTATCC	2 cut(s)	125, 1146
BcnI	CCSGG	3 cut(s)	179, 1280, 1315
BcoDI	GTCTC	5 cut(s)	124, 268, 405, 857, 939
BfaI	CTAG	3 cut(s)	263, 362, 1493
BfmI	CTRYAG	2 cut(s)	522, 913
BfoI	RGCGCY	2 cut(s)	8, 1338
BfuAI	ACCTGC	1 cut(s)	362
BfuI	GTATCC	2 cut(s)	125, 1146
BisI	GCNGC	8 cut(s)	142, 236, 239, 328, 645, 726, 919, 1368
BlpI	GCTNAGC	2 cut(s)	311, 1269
BlsI	GCNGC	8 cut(s)	143, 237, 240, 329, 646, 727, 920, 1369
Bme1390I	CCNGG	6 cut(s)	179, 230, 688, 1053, 1280, 1315
Bme18I	GGWCC	3 cut(s)	259, 1201, 1238
BmeT110I	CYCGRG	1 cut(s)	254
BmgBI	CACGTC	1 cut(s)	278
BmgT120I	GGNCC	4 cut(s)	82, 259, 1201, 1238
BmiI	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1336
BmrFI	CCNGG	6 cut(s)	179, 230, 688, 1053, 1280, 1315
BmrI	ACTGGG	1 cut(s)	1180
BmsI	GCATC	3 cut(s)	411, 663, 988
BmuI	ACTGGG	1 cut(s)	1180
BpiI	GAAGAC	2 cut(s)	367, 1063
Bpu1102I	GCTNAGC	2 cut(s)	311, 1269
BpuEI	CTTGAG	1 cut(s)	781
BpuMI	CCSGG	3 cut(s)	179, 1280, 1315
BsaAI	YACGTR	1 cut(s)	464
BsaHI	GRCGYC	3 cut(s)	96, 396, 1335
BsaJI	CCNNGG	7 cut(s)	136, 217, 229, 391, 837, 856, 1314
BsaWI	WCCGGW	2 cut(s)	381, 589
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 58, 218, 231, 424, 456, 498
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	3 cut(s)	893, 931, 1175
Bse3DI	GCAATG	1 cut(s)	50
BseBI	CCWGG	3 cut(s)	230, 688, 1053
BseDI	CCNNGG	7 cut(s)	136, 217, 229, 391, 837, 856, 1314
BseGI	GGATG	2 cut(s)	672, 757
BseLI	CCNNNNNNNGG	7 cut(s)	31, 58, 218, 231, 424, 456, 498
BseMI	GCAATG	1 cut(s)	50
BseMII	CTCAG	3 cut(s)	302, 1005, 1260
BseNI	ACTGG	3 cut(s)	893, 931, 1175
BseRI	GAGGAG	4 cut(s)	125, 206, 380, 1400
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	6 cut(s)	225, 247, 631, 737, 930, 1354
BsgI	GTGCAG	2 cut(s)	325, 1353
Bsh1236I	CGCG	1 cut(s)	197
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	62, 84, 141, 861, 1212
BshNI	GGYRCC	3 cut(s)	48, 221, 1334
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	317, 521
BsiHKCI	CYCGRG	1 cut(s)	254
BsiSI	CCGG	8 cut(s)	75, 179, 382, 569, 590, 641, 1280, 1314
BslFI	GGGAC	1 cut(s)	272
BslI	CCNNNNNNNGG	7 cut(s)	31, 58, 218, 231, 424, 456, 498
BsmAI	GTCTC	5 cut(s)	124, 268, 405, 857, 939
BsmBI	CGTCTC	1 cut(s)	268
BsmFI	GGGAC	1 cut(s)	272
BsnI	GGCC	5 cut(s)	62, 84, 141, 861, 1212
BsoBI	CYCGRG	1 cut(s)	254
Bsp1286I	GDGCHC	2 cut(s)	317, 521
Bsp143I	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
Bsp1720I	GCTNAGC	2 cut(s)	311, 1269
Bsp19I	CCATGG	1 cut(s)	856
BspACI	CCGC	5 cut(s)	21, 142, 195, 327, 408
BspANI	GGCC	5 cut(s)	62, 84, 141, 861, 1212
BspCNI	CTCAG	3 cut(s)	303, 1006, 1261
BspFNI	CGCG	1 cut(s)	197
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1336
BspMI	ACCTGC	1 cut(s)	362
BspPI	GGATC	3 cut(s)	566, 579, 1354
BspQI	GCTCTTC	1 cut(s)	248
BspT107I	GGYRCC	3 cut(s)	48, 221, 1334
BsrDI	GCAATG	1 cut(s)	50
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	3 cut(s)	893, 931, 1175
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	7 cut(s)	136, 217, 229, 391, 837, 856, 1314
BssMI	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
BssNAI	GTATAC	1 cut(s)	693
BssNI	GRCGYC	3 cut(s)	96, 396, 1335
BssT1I	CCWWGG	2 cut(s)	837, 856
Bst1107I	GTATAC	1 cut(s)	693
Bst2UI	CCWGG	3 cut(s)	230, 688, 1053
Bst4CI	ACNGT	2 cut(s)	226, 484
Bst6I	CTCTTC	6 cut(s)	92, 113, 248, 875, 1469, 1491
BstACI	GRCGYC	3 cut(s)	96, 396, 1335
BstBAI	YACGTR	1 cut(s)	464
BstC8I	GCNNGC	8 cut(s)	76, 251, 517, 562, 566, 723, 1023, 1266
BstDEI	CTNAG	4 cut(s)	311, 1014, 1269, 1479
BstDSI	CCRYGG	1 cut(s)	856
BstF5I	GGATG	2 cut(s)	672, 757
BstFNI	CGCG	1 cut(s)	197
BstH2I	RGCGCY	2 cut(s)	8, 1338
BstHHI	GCGC	3 cut(s)	7, 199, 1337
BstKTI	GATC	7 cut(s)	574, 868, 1084, 1344, 1349, 1404, 1490
BstMAI	GTCTC	5 cut(s)	124, 268, 405, 857, 939
BstMBI	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	4 cut(s)	13, 605, 641, 1270
BstNI	CCWGG	3 cut(s)	230, 688, 1053
BstNSI	RCATGY	1 cut(s)	1010
BstSCI	CCNGG	6 cut(s)	177, 228, 686, 1051, 1278, 1313
BstSFI	CTRYAG	2 cut(s)	522, 913
BstUI	CGCG	1 cut(s)	197
BstV1I	GCAGC	6 cut(s)	225, 247, 631, 737, 930, 1354
BstV2I	GAAGAC	2 cut(s)	367, 1063
BstX2I	RGATCY	1 cut(s)	571
BstXI	CCANNNNNNTGG	2 cut(s)	736, 1059
BstYI	RGATCY	1 cut(s)	571
BstZ17I	GTATAC	1 cut(s)	693
BstZI	CGGCCG	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	125, 1146
BsuRI	GGCC	5 cut(s)	62, 84, 141, 861, 1212
BtgI	CCRYGG	1 cut(s)	856
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	278
BtsCI	GGATG	2 cut(s)	672, 757
BtsIMutI	CAGTG	2 cut(s)	1072, 1168
BveI	ACCTGC	1 cut(s)	362
Cac8I	GCNNGC	8 cut(s)	76, 251, 517, 562, 566, 723, 1023, 1266
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	3 cut(s)	7, 199, 1337
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	4 cut(s)	82, 259, 1201, 1238
CseI	GACGC	5 cut(s)	49, 104, 346, 385, 532
Csp6I	GTAC	2 cut(s)	49, 655
CviQI	GTAC	2 cut(s)	49, 655
DdeI	CTNAG	4 cut(s)	311, 1014, 1269, 1479
DinI	GGCGCC	1 cut(s)	1336
DpnI	GATC	7 cut(s)	573, 867, 1083, 1343, 1348, 1403, 1489
DpnII	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
DrdI	GACNNNNNNGTC	1 cut(s)	436
DseDI	GACNNNNNNGTC	1 cut(s)	436
EaeI	YGGCCR	1 cut(s)	139
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	6 cut(s)	92, 113, 248, 875, 1469, 1491
EarI	CTCTTC	6 cut(s)	92, 113, 248, 875, 1469, 1491
EciI	GGCGGA	2 cut(s)	10, 423
Ecl136II	GAGCTC	2 cut(s)	315, 519
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	2 cut(s)	837, 856
Eco24I	GRGCYC	2 cut(s)	317, 521
Eco47I	GGWCC	3 cut(s)	259, 1201, 1238
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	2 cut(s)	315, 519
Eco57I	CTGAAG	1 cut(s)	29
Eco72I	CACGTG	1 cut(s)	464
Eco88I	CYCGRG	1 cut(s)	254
EcoICRI	GAGCTC	2 cut(s)	315, 519
EcoO109I	RGGNCCY	1 cut(s)	259
EcoRII	CCWGG	3 cut(s)	228, 686, 1051
EcoT14I	CCWWGG	2 cut(s)	837, 856
EcoT22I	ATGCAT	1 cut(s)	1534
EcoT38I	GRGCYC	2 cut(s)	317, 521
EgeI	GGCGCC	1 cut(s)	1336
EheI	GGCGCC	1 cut(s)	1336
ErhI	CCWWGG	2 cut(s)	837, 856
Esp3I	CGTCTC	1 cut(s)	268
FaqI	GGGAC	1 cut(s)	272
FblI	GTMKAC	2 cut(s)	282, 692
Fnu4HI	GCNGC	8 cut(s)	142, 236, 239, 328, 645, 726, 919, 1368
FokI	GGATG	2 cut(s)	679, 764
FriOI	GRGCYC	2 cut(s)	317, 521
Fsp4HI	GCNGC	8 cut(s)	142, 236, 239, 328, 645, 726, 919, 1368
FspBI	CTAG	3 cut(s)	263, 362, 1493
GlaI	GCGC	3 cut(s)	6, 198, 1336
GluI	GCNGC	8 cut(s)	142, 236, 239, 328, 645, 726, 919, 1368
HaeII	RGCGCY	2 cut(s)	8, 1338
HaeIII	GGCC	5 cut(s)	62, 84, 141, 861, 1212
HapII	CCGG	8 cut(s)	75, 179, 382, 569, 590, 641, 1280, 1314
HgaI	GACGC	5 cut(s)	49, 104, 346, 385, 532
HhaI	GCGC	3 cut(s)	7, 199, 1337
Hin1I	GRCGYC	3 cut(s)	96, 396, 1335
Hin6I	GCGC	3 cut(s)	5, 197, 1335
HinP1I	GCGC	3 cut(s)	5, 197, 1335
HincII	GTYRAC	2 cut(s)	886, 1296
HindII	GTYRAC	2 cut(s)	886, 1296
HinfI	GANTC	3 cut(s)	132, 508, 763
HpaII	CCGG	8 cut(s)	75, 179, 382, 569, 590, 641, 1280, 1314
HphI	GGTGA	2 cut(s)	82, 313
Hpy166II	GTNNAC	4 cut(s)	283, 693, 886, 1296
Hpy188I	TCNGA	3 cut(s)	442, 576, 1346
Hpy188III	TCNNGA	3 cut(s)	127, 1144, 1405
Hpy8I	GTNNAC	4 cut(s)	283, 693, 886, 1296
Hpy99I	CGWCG	4 cut(s)	98, 161, 401, 548
HpyAV	CCTTC	4 cut(s)	4, 838, 1086, 1321
HpyCH4III	ACNGT	2 cut(s)	226, 484
HpyCH4IV	ACGT	5 cut(s)	277, 463, 555, 653, 1457
HpyCH4V	TGCA	9 cut(s)	342, 496, 635, 773, 1006, 1021, 1229, 1370, 1532
HpyF10VI	GCNNNNNNNGC	4 cut(s)	13, 605, 641, 1270
HpyF3I	CTNAG	4 cut(s)	311, 1014, 1269, 1479
HpySE526I	ACGT	5 cut(s)	277, 463, 555, 653, 1457
Hsp92I	GRCGYC	3 cut(s)	96, 396, 1335
HspAI	GCGC	3 cut(s)	5, 197, 1335
KasI	GGCGCC	1 cut(s)	1334
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
LguI	GCTCTTC	1 cut(s)	248
LmnI	GCTCC	1 cut(s)	320
Lsp1109I	GCAGC	6 cut(s)	225, 247, 631, 737, 930, 1354
LweI	GCATC	3 cut(s)	411, 663, 988
MaeI	CTAG	3 cut(s)	263, 362, 1493
MaeII	ACGT	5 cut(s)	277, 463, 555, 653, 1457
MaeIII	GTNAC	4 cut(s)	190, 526, 1030, 1453
MalI	GATC	7 cut(s)	573, 867, 1083, 1343, 1348, 1403, 1489
MboI	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
MfeI	CAATTG	2 cut(s)	1026, 1350
MflI	RGATCY	1 cut(s)	571
MhlI	GDGCHC	2 cut(s)	317, 521
MluCI	AATT	9 cut(s)	636, 768, 842, 1026, 1047, 1086, 1101, 1231, 1350
Mly113I	GGCGCC	1 cut(s)	1335
MlyI	GAGTC	2 cut(s)	126, 772
MmeI	TCCRAC	1 cut(s)	420
Mph1103I	ATGCAT	1 cut(s)	1534
MroNI	GCCGGC	1 cut(s)	74
MseI	TTAA	3 cut(s)	552, 848, 984
MslI	CAYNNNNRTG	1 cut(s)	536
MspA1I	CMGCKG	1 cut(s)	238
MspI	CCGG	8 cut(s)	75, 179, 382, 569, 590, 641, 1280, 1314
MspR9I	CCNGG	6 cut(s)	179, 230, 688, 1053, 1280, 1315
MunI	CAATTG	2 cut(s)	1026, 1350
MvaI	CCWGG	3 cut(s)	230, 688, 1053
MvnI	CGCG	1 cut(s)	197
MwoI	GCNNNNNNNGC	4 cut(s)	13, 605, 641, 1270
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	1335
NciI	CCSGG	3 cut(s)	179, 1280, 1315
NcoI	CCATGG	1 cut(s)	856
NdeII	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1336
NmeAIII	GCCGAG	4 cut(s)	117, 198, 372, 404
NmuCI	GTSAC	1 cut(s)	526
NsiI	ATGCAT	1 cut(s)	1534
NspI	RCATGY	1 cut(s)	1010
PagI	TCATGA	1 cut(s)	126
PaqCI	CACCTGC	1 cut(s)	362
PciSI	GCTCTTC	1 cut(s)	248
PcsI	WCGNNNNNNNCGW	3 cut(s)	476, 540, 552
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	1 cut(s)	508
PflFI	GACNNNGTC	1 cut(s)	263
PfoI	TCCNGGA	1 cut(s)	1051
PkrI	GCNGC	8 cut(s)	143, 237, 240, 329, 646, 727, 920, 1369
PleI	GAGTC	2 cut(s)	126, 771
PluTI	GGCGCC	1 cut(s)	1338
PmaCI	CACGTG	1 cut(s)	464
PmlI	CACGTG	1 cut(s)	464
PpsI	GAGTC	2 cut(s)	126, 771
Ppu21I	YACGTR	1 cut(s)	464
PpuMI	RGGWCCY	1 cut(s)	259
Psp124BI	GAGCTC	2 cut(s)	317, 521
Psp1406I	AACGTT	1 cut(s)	555
Psp5II	RGGWCCY	1 cut(s)	259
Psp6I	CCWGG	3 cut(s)	228, 686, 1051
PspCI	CACGTG	1 cut(s)	464
PspGI	CCWGG	3 cut(s)	228, 686, 1051
PspN4I	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1336
PspPI	GGNCC	4 cut(s)	82, 259, 1201, 1238
PspPPI	RGGWCCY	1 cut(s)	259
PsrI	GAACNNNNNNTAC	2 cut(s)	774, 806
PsuI	RGATCY	1 cut(s)	571
PsyI	GACNNNGTC	1 cut(s)	263
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	2 cut(s)	50, 656
RsaNI	GTAC	2 cut(s)	49, 655
RseI	CAYNNNNRTG	1 cut(s)	536
SacI	GAGCTC	2 cut(s)	317, 521
SapI	GCTCTTC	1 cut(s)	248
SaqAI	TTAA	3 cut(s)	552, 848, 984
SatI	GCNGC	8 cut(s)	142, 236, 239, 328, 645, 726, 919, 1368
Sau3AI	GATC	7 cut(s)	571, 865, 1081, 1341, 1346, 1401, 1487
Sau96I	GGNCC	4 cut(s)	82, 259, 1201, 1238
SchI	GAGTC	2 cut(s)	126, 772
ScrFI	CCNGG	6 cut(s)	179, 230, 688, 1053, 1280, 1315
SduI	GDGCHC	2 cut(s)	317, 521
SfaNI	GCATC	3 cut(s)	411, 663, 988
SfcI	CTRYAG	2 cut(s)	522, 913
SfoI	GGCGCC	1 cut(s)	1336
SinI	GGWCC	3 cut(s)	259, 1201, 1238
SmiMI	CAYNNNNRTG	1 cut(s)	536
SmlI	CTYRAG	1 cut(s)	760
SmoI	CTYRAG	1 cut(s)	760
Sse9I	AATT	9 cut(s)	636, 768, 842, 1026, 1047, 1086, 1101, 1231, 1350
SsiI	CCGC	5 cut(s)	21, 142, 195, 327, 408
SspDI	GGCGCC	1 cut(s)	1334
SspMI	CTAG	3 cut(s)	263, 362, 1493
SstI	GAGCTC	2 cut(s)	317, 521
StyD4I	CCNGG	6 cut(s)	177, 228, 686, 1051, 1278, 1313
StyI	CCWWGG	2 cut(s)	837, 856
TaaI	ACNGT	2 cut(s)	226, 484
TaiI	ACGT	5 cut(s)	280, 466, 558, 656, 1460
TaqI	TCGA	4 cut(s)	864, 957, 1084, 1145
TasI	AATT	9 cut(s)	636, 768, 842, 1026, 1047, 1086, 1101, 1231, 1350
TauI	GCSGC	2 cut(s)	144, 330
TfiI	GAWTC	1 cut(s)	508
Tru1I	TTAA	3 cut(s)	552, 848, 984
Tru9I	TTAA	3 cut(s)	552, 848, 984
TscAI	CASTG	2 cut(s)	1072, 1175
TseFI	GTSAC	1 cut(s)	526
TseI	GCWGC	6 cut(s)	235, 238, 644, 725, 918, 1367
Tsp45I	GTSAC	1 cut(s)	526
TspDTI	ATGAA	5 cut(s)	463, 795, 1066, 1186, 1536
TspRI	CASTG	2 cut(s)	1072, 1175
Tth111I	GACNNNGTC	1 cut(s)	263
VpaK11BI	GGWCC	3 cut(s)	259, 1201, 1238
XapI	RAATTY	3 cut(s)	842, 1101, 1231
XceI	RCATGY	1 cut(s)	1010
XmiI	GTMKAC	2 cut(s)	282, 692
XspI	CTAG	3 cut(s)	263, 362, 1493
Zsp2I	ATGCAT	1 cut(s)	1534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.