Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Reverse (-)

35650774 .. 35653934

Gene Structure 3161 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00243100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

ATGGCGCTAAAGGTGCTTTCCGCCCTTGACACGGCGAAGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTGTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACAAACGTCAACCAAACGACACAGTATTCAACAACAACGACAACAACTTCGTAATCCCGGCGCTAGTCGTTACGGCGCTGGTGGGCTTCCCTCTCCTCGGCACCGTCCTGGGGCAGCTGCTCTTCGGCAGGCTTGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGGTGATGGTGCTGAGCTCCATAGGGTGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGTCAGCCTCGTCTTCTTTCGATTCCTCCTCGGCGTCGGCATCGGCGGAGACTACCCCCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGGCTGTGTTCTCCATGCAAGGGTTTGGGATTCTGGCGAGCTCTATAGTGACCATCGTGGTGTGCGCCGTCTTTAACTTTGCGAGCAAGCCGGATCCGAAGAAAGCGACGCCAGACGAGGCAGACATAACGTGGAGGTTGATACTCATGCTCGGTGCAATTCCGGCTGCCATGACGTACTATTGGCGGATGATGATGCCTGAAACTGCCAGGTATACAGCACTGGTTGAGCTAAATGTGGTGCAAGCAGCCAAGGATATGGAGAAAGTGTTGGCTGTTTCCTTGAGTCAAATTGCAGAAGATGAACCAGATTTACTATCAGTAGGACAAAACCCTGCATCATCATATCCCTTCTTCTCCAAGGAATTTTTACGTCTCCATGGCCGCGATCTCTTCTCTTGTGCTGCCAACTGGTTTCTTGTTGATGTTGTCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATATCGACAAAAAATACCCAAAATACAGGGTTAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAATATGCTCAACAATTCCAGGATATTGGTTCAGTGTCTTCTTCATTGATCGAATTGGAAGGCGAAAAATTCAAATGATGGGGTTTTTCGTCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAAAATACAGATGTAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACTACATTTATAGTGCCTGCTGAGCTTTTCCCGGCGAGGTTTAGGTCAACTTGTCATGGGATTTCTGGAGCATCGGGGAAGGTTGGCGCCTTGATTGGATCAATTGGATTTCTATGGGCTGCACATGGTCAGAATGAGGAGGTTCGAAAGACGAAAGAAATCAAGAAGTCGTTGATTGGTTTAGGTGTAGTTTGTATTCTGGGATTGGTGGTAACGTATTTCTTCACACCCGAAACTACGGGAAGATCACTAGAAGAGAATGAGAATGAGAATGAGAATGGAAATGAACAACATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

527

Amino Acids

58.71

Weight (kDa)

8.89

Isoelectric Point (pI)

26.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	23 - 516	2.2e-46	Sugar (and other) transporter
MFS_1	PF07690	68 - 461	6.7e-25	Major Facilitator Superfamily
MFS_1	PF07690	349 - 513	1.4e-06	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	395
AasI	GACNNNNNNGTC	1 cut(s)	472
Acc36I	ACCTGC	1 cut(s)	395
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	3 cut(s)	48, 254, 1370
AccI	GTMKAC	2 cut(s)	315, 728
AccII	CGCG	1 cut(s)	900
AciI	CCGC	7 cut(s)	21, 142, 360, 441, 515, 700, 898
AclWI	GGATC	3 cut(s)	602, 615, 1390
AcoI	YGGCCR	2 cut(s)	139, 895
AcsI	RAATTY	3 cut(s)	878, 1137, 1267
AcvI	CACGTG	1 cut(s)	500
AcyI	GRCGYC	4 cut(s)	96, 429, 623, 1371
AfaI	GTAC	2 cut(s)	50, 692
AfiI	CCNNNNNNNGG	7 cut(s)	31, 58, 251, 264, 460, 492, 534
AflIII	ACRYGT	2 cut(s)	310, 497
AgsI	TTSAA	3 cut(s)	58, 184, 1142
AjiI	CACGTC	1 cut(s)	311
AjnI	CCWGG	3 cut(s)	261, 722, 1087
AluBI	AGCT	5 cut(s)	271, 348, 555, 745, 1309
AluI	AGCT	5 cut(s)	271, 348, 555, 745, 1309
Alw21I	GWGCWC	2 cut(s)	350, 557
Alw26I	GTCTC	5 cut(s)	124, 301, 438, 893, 975
AlwI	GGATC	3 cut(s)	602, 615, 1390
AoxI	GGCC	5 cut(s)	60, 82, 139, 895, 1246
ApeKI	GCWGC	7 cut(s)	268, 271, 680, 761, 917, 954, 1403
ApoI	RAATTY	3 cut(s)	878, 1137, 1267
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
Asp718I	GGTACC	1 cut(s)	48
AspLEI	GCGC	5 cut(s)	7, 217, 232, 581, 1373
AspS9I	GGNCC	4 cut(s)	82, 292, 1237, 1274
AsuC2I	CCSGG	2 cut(s)	212, 1316
AsuHPI	GGTGA	2 cut(s)	82, 346
AsuII	TTCGAA	1 cut(s)	1429
AvaII	GGWCC	3 cut(s)	292, 1237, 1274
BamHI	GGATCC	1 cut(s)	607
BanI	GGYRCC	3 cut(s)	48, 254, 1370
BanII	GRGCYC	2 cut(s)	350, 557
BbrPI	CACGTG	1 cut(s)	500
BbsI	GAAGAC	4 cut(s)	44, 400, 937, 1099
Bbv12I	GWGCWC	2 cut(s)	350, 557
BbvI	GCAGC	7 cut(s)	258, 280, 667, 773, 904, 966, 1390
BccI	CCATC	8 cut(s)	71, 131, 325, 331, 377, 476, 575, 1141
BceAI	ACGGC	3 cut(s)	48, 243, 566
BciT130I	CCWGG	3 cut(s)	263, 724, 1089
BciVI	GTATCC	2 cut(s)	125, 1182
BcnI	CCSGG	2 cut(s)	212, 1316
BcoDI	GTCTC	5 cut(s)	124, 301, 438, 893, 975
BfaI	CTAG	4 cut(s)	218, 296, 395, 1535
BfmI	CTRYAG	2 cut(s)	558, 949
BfoI	RGCGCY	4 cut(s)	8, 218, 233, 1374
BfuAI	ACCTGC	1 cut(s)	395
BfuI	GTATCC	2 cut(s)	125, 1182
BlpI	GCTNAGC	2 cut(s)	344, 1305
Bme1390I	CCNGG	5 cut(s)	212, 263, 724, 1089, 1316
Bme18I	GGWCC	3 cut(s)	292, 1237, 1274
BmgBI	CACGTC	1 cut(s)	311
BmgT120I	GGNCC	4 cut(s)	82, 292, 1237, 1274
BmiI	GGNNCC	5 cut(s)	50, 256, 293, 609, 1372
BmrFI	CCNGG	5 cut(s)	212, 263, 724, 1089, 1316
BmrI	ACTGGG	1 cut(s)	1216
BmsI	GCATC	5 cut(s)	444, 699, 860, 1024, 1364
BmuI	ACTGGG	1 cut(s)	1216
BpiI	GAAGAC	4 cut(s)	44, 400, 937, 1099
BpmI	CTGGAG	1 cut(s)	1371
Bpu1102I	GCTNAGC	2 cut(s)	344, 1305
Bpu14I	TTCGAA	1 cut(s)	1429
BpuEI	CTTGAG	1 cut(s)	817
BpuMI	CCSGG	2 cut(s)	212, 1316
BsaAI	YACGTR	1 cut(s)	500
BsaHI	GRCGYC	4 cut(s)	96, 429, 623, 1371
BsaJI	CCNNGG	7 cut(s)	136, 250, 262, 424, 765, 873, 892
BsaXI	ACNNNNNCTCC	2 cut(s)	767, 797
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 58, 251, 264, 460, 492, 534
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	4 cut(s)	741, 929, 967, 1211
Bse3DI	GCAATG	1 cut(s)	50
BseBI	CCWGG	3 cut(s)	263, 724, 1089
BseDI	CCNNGG	7 cut(s)	136, 250, 262, 424, 765, 873, 892
BseGI	GGATG	1 cut(s)	708
BseLI	CCNNNNNNNGG	7 cut(s)	31, 58, 251, 264, 460, 492, 534
BseMI	GCAATG	1 cut(s)	50
BseMII	CTCAG	3 cut(s)	335, 1041, 1296
BseNI	ACTGG	4 cut(s)	741, 929, 967, 1211
BseRI	GAGGAG	4 cut(s)	125, 239, 413, 1436
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	258, 280, 667, 773, 904, 966, 1390
BsgI	GTGCAG	2 cut(s)	358, 1389
Bsh1236I	CGCG	1 cut(s)	900
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	62, 84, 141, 897, 1248
BshNI	GGYRCC	3 cut(s)	48, 254, 1370
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	350, 557
BsiSI	CCGG	5 cut(s)	75, 212, 605, 677, 1316
BslFI	GGGAC	1 cut(s)	305
BslI	CCNNNNNNNGG	7 cut(s)	31, 58, 251, 264, 460, 492, 534
BsmAI	GTCTC	5 cut(s)	124, 301, 438, 893, 975
BsmBI	CGTCTC	2 cut(s)	301, 893
BsmFI	GGGAC	1 cut(s)	305
BsnI	GGCC	5 cut(s)	62, 84, 141, 897, 1248
Bsp119I	TTCGAA	1 cut(s)	1429
Bsp1286I	GDGCHC	2 cut(s)	350, 557
Bsp143I	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
Bsp1720I	GCTNAGC	2 cut(s)	344, 1305
Bsp19I	CCATGG	1 cut(s)	892
BspACI	CCGC	7 cut(s)	21, 142, 360, 441, 515, 700, 898
BspANI	GGCC	5 cut(s)	62, 84, 141, 897, 1248
BspCNI	CTCAG	3 cut(s)	336, 1042, 1297
BspFNI	CGCG	1 cut(s)	900
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	5 cut(s)	50, 256, 293, 609, 1372
BspMI	ACCTGC	1 cut(s)	395
BspPI	GGATC	3 cut(s)	602, 615, 1390
BspQI	GCTCTTC	1 cut(s)	281
BspT104I	TTCGAA	1 cut(s)	1429
BspT107I	GGYRCC	3 cut(s)	48, 254, 1370
BsrDI	GCAATG	1 cut(s)	50
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	4 cut(s)	741, 929, 967, 1211
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	7 cut(s)	136, 250, 262, 424, 765, 873, 892
BssMI	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
BssNAI	GTATAC	1 cut(s)	729
BssNI	GRCGYC	4 cut(s)	96, 429, 623, 1371
BssT1I	CCWWGG	3 cut(s)	765, 873, 892
Bst1107I	GTATAC	1 cut(s)	729
Bst2UI	CCWGG	3 cut(s)	263, 724, 1089
Bst4CI	ACNGT	2 cut(s)	178, 259
Bst6I	CTCTTC	4 cut(s)	113, 281, 911, 1533
BstACI	GRCGYC	4 cut(s)	96, 429, 623, 1371
BstBAI	YACGTR	1 cut(s)	500
BstBI	TTCGAA	1 cut(s)	1429
BstC8I	GCNNGC	8 cut(s)	76, 284, 553, 598, 602, 759, 1059, 1302
BstDEI	CTNAG	3 cut(s)	344, 1050, 1305
BstDSI	CCRYGG	1 cut(s)	892
BstF5I	GGATG	1 cut(s)	708
BstFNI	CGCG	1 cut(s)	900
BstH2I	RGCGCY	4 cut(s)	8, 218, 233, 1374
BstHHI	GCGC	5 cut(s)	7, 217, 232, 581, 1373
BstKTI	GATC	5 cut(s)	610, 904, 1120, 1385, 1532
BstMAI	GTCTC	5 cut(s)	124, 301, 438, 893, 975
BstMBI	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	3 cut(s)	13, 677, 1306
BstNI	CCWGG	3 cut(s)	263, 724, 1089
BstNSI	RCATGY	2 cut(s)	1046, 1580
BstSCI	CCNGG	5 cut(s)	210, 261, 722, 1087, 1314
BstSFI	CTRYAG	2 cut(s)	558, 949
BstUI	CGCG	1 cut(s)	900
BstV1I	GCAGC	7 cut(s)	258, 280, 667, 773, 904, 966, 1390
BstV2I	GAAGAC	4 cut(s)	44, 400, 937, 1099
BstX2I	RGATCY	1 cut(s)	607
BstXI	CCANNNNNNTGG	2 cut(s)	772, 1095
BstYI	RGATCY	1 cut(s)	607
BstZ17I	GTATAC	1 cut(s)	729
BstZI	CGGCCG	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	125, 1182
BsuRI	GGCC	5 cut(s)	62, 84, 141, 897, 1248
BtgI	CCRYGG	1 cut(s)	892
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	311
BtsCI	GGATG	1 cut(s)	708
BtsIMutI	CAGTG	3 cut(s)	734, 1108, 1204
BveI	ACCTGC	1 cut(s)	395
Cac8I	GCNNGC	8 cut(s)	76, 284, 553, 598, 602, 759, 1059, 1302
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	5 cut(s)	7, 217, 232, 581, 1373
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	4 cut(s)	82, 292, 1237, 1274
CseI	GACGC	5 cut(s)	49, 104, 379, 418, 631
Csp6I	GTAC	2 cut(s)	49, 691
CviQI	GTAC	2 cut(s)	49, 691
DdeI	CTNAG	3 cut(s)	344, 1050, 1305
DinI	GGCGCC	1 cut(s)	1372
DpnI	GATC	5 cut(s)	609, 903, 1119, 1384, 1531
DpnII	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
DrdI	GACNNNNNNGTC	1 cut(s)	472
DseDI	GACNNNNNNGTC	1 cut(s)	472
EaeI	YGGCCR	2 cut(s)	139, 895
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	4 cut(s)	113, 281, 911, 1533
EarI	CTCTTC	4 cut(s)	113, 281, 911, 1533
EciI	GGCGGA	3 cut(s)	10, 456, 715
Ecl136II	GAGCTC	2 cut(s)	348, 555
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	3 cut(s)	765, 873, 892
Eco24I	GRGCYC	2 cut(s)	350, 557
Eco47I	GGWCC	3 cut(s)	292, 1237, 1274
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	2 cut(s)	348, 555
Eco72I	CACGTG	1 cut(s)	500
EcoICRI	GAGCTC	2 cut(s)	348, 555
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRII	CCWGG	3 cut(s)	261, 722, 1087
EcoT14I	CCWWGG	3 cut(s)	765, 873, 892
EcoT22I	ATGCAT	1 cut(s)	1582
EcoT38I	GRGCYC	2 cut(s)	350, 557
EgeI	GGCGCC	1 cut(s)	1372
EheI	GGCGCC	1 cut(s)	1372
ErhI	CCWWGG	3 cut(s)	765, 873, 892
Esp3I	CGTCTC	2 cut(s)	301, 893
FaqI	GGGAC	1 cut(s)	305
FblI	GTMKAC	2 cut(s)	315, 728
FokI	GGATG	1 cut(s)	715
FriOI	GRGCYC	2 cut(s)	350, 557
FspBI	CTAG	4 cut(s)	218, 296, 395, 1535
GlaI	GCGC	5 cut(s)	6, 216, 231, 580, 1372
GsuI	CTGGAG	1 cut(s)	1371
HaeII	RGCGCY	4 cut(s)	8, 218, 233, 1374
HaeIII	GGCC	5 cut(s)	62, 84, 141, 897, 1248
HapII	CCGG	5 cut(s)	75, 212, 605, 677, 1316
HgaI	GACGC	5 cut(s)	49, 104, 379, 418, 631
HhaI	GCGC	5 cut(s)	7, 217, 232, 581, 1373
Hin1I	GRCGYC	4 cut(s)	96, 429, 623, 1371
Hin6I	GCGC	5 cut(s)	5, 215, 230, 579, 1371
HinP1I	GCGC	5 cut(s)	5, 215, 230, 579, 1371
HincII	GTYRAC	2 cut(s)	164, 1332
HindII	GTYRAC	2 cut(s)	164, 1332
HinfI	GANTC	4 cut(s)	132, 417, 544, 799
HpaII	CCGG	5 cut(s)	75, 212, 605, 677, 1316
HphI	GGTGA	2 cut(s)	82, 346
Hpy166II	GTNNAC	5 cut(s)	90, 164, 316, 729, 1332
Hpy188I	TCNGA	3 cut(s)	478, 612, 1416
Hpy188III	TCNNGA	4 cut(s)	127, 1180, 1350, 1447
Hpy8I	GTNNAC	5 cut(s)	90, 164, 316, 729, 1332
Hpy99I	CGWCG	3 cut(s)	98, 434, 625
HpyAV	CCTTC	3 cut(s)	874, 1122, 1357
HpyCH4III	ACNGT	2 cut(s)	178, 259
HpyCH4IV	ACGT	7 cut(s)	160, 310, 499, 644, 689, 886, 1499
HpyF10VI	GCNNNNNNNGC	3 cut(s)	13, 677, 1306
HpyF3I	CTNAG	3 cut(s)	344, 1050, 1305
HpySE526I	ACGT	7 cut(s)	160, 310, 499, 644, 689, 886, 1499
Hsp92I	GRCGYC	4 cut(s)	96, 429, 623, 1371
HspAI	GCGC	5 cut(s)	5, 215, 230, 579, 1371
KasI	GGCGCC	1 cut(s)	1370
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	2 cut(s)	353, 1352
Lsp1109I	GCAGC	7 cut(s)	258, 280, 667, 773, 904, 966, 1390
LweI	GCATC	5 cut(s)	444, 699, 860, 1024, 1364
MaeI	CTAG	4 cut(s)	218, 296, 395, 1535
MaeII	ACGT	7 cut(s)	160, 310, 499, 644, 689, 886, 1499
MaeIII	GTNAC	4 cut(s)	223, 562, 1066, 1495
MalI	GATC	5 cut(s)	609, 903, 1119, 1384, 1531
MboI	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
MfeI	CAATTG	2 cut(s)	1062, 1386
MflI	RGATCY	1 cut(s)	607
MhlI	GDGCHC	2 cut(s)	350, 557
MluCI	AATT	9 cut(s)	672, 804, 878, 1062, 1083, 1122, 1137, 1267, 1386
Mly113I	GGCGCC	1 cut(s)	1371
MlyI	GAGTC	2 cut(s)	126, 808
MmeI	TCCRAC	1 cut(s)	456
Mph1103I	ATGCAT	1 cut(s)	1582
MroNI	GCCGGC	1 cut(s)	74
MseI	TTAA	2 cut(s)	588, 1020
MslI	CAYNNNNRTG	1 cut(s)	572
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	5 cut(s)	75, 212, 605, 677, 1316
MspR9I	CCNGG	5 cut(s)	212, 263, 724, 1089, 1316
MunI	CAATTG	2 cut(s)	1062, 1386
MvaI	CCWGG	3 cut(s)	263, 724, 1089
MvnI	CGCG	1 cut(s)	900
MwoI	GCNNNNNNNGC	3 cut(s)	13, 677, 1306
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	1371
NciI	CCSGG	2 cut(s)	212, 1316
NcoI	CCATGG	1 cut(s)	892
NdeII	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	5 cut(s)	50, 256, 293, 609, 1372
NmeAIII	GCCGAG	4 cut(s)	117, 231, 405, 440
NmuCI	GTSAC	1 cut(s)	562
NsiI	ATGCAT	1 cut(s)	1582
NspI	RCATGY	2 cut(s)	1046, 1580
NspV	TTCGAA	1 cut(s)	1429
PagI	TCATGA	1 cut(s)	126
PaqCI	CACCTGC	1 cut(s)	395
PciSI	GCTCTTC	1 cut(s)	281
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	2 cut(s)	417, 544
PflFI	GACNNNGTC	1 cut(s)	296
PfoI	TCCNGGA	1 cut(s)	1087
PleI	GAGTC	2 cut(s)	126, 807
PluTI	GGCGCC	1 cut(s)	1374
PmaCI	CACGTG	1 cut(s)	500
PmlI	CACGTG	1 cut(s)	500
PpsI	GAGTC	2 cut(s)	126, 807
Ppu21I	YACGTR	1 cut(s)	500
PpuMI	RGGWCCY	1 cut(s)	292
Psp124BI	GAGCTC	2 cut(s)	350, 557
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	3 cut(s)	261, 722, 1087
PspCI	CACGTG	1 cut(s)	500
PspGI	CCWGG	3 cut(s)	261, 722, 1087
PspN4I	GGNNCC	5 cut(s)	50, 256, 293, 609, 1372
PspPI	GGNCC	4 cut(s)	82, 292, 1237, 1274
PspPPI	RGGWCCY	1 cut(s)	292
PsrI	GAACNNNNNNTAC	2 cut(s)	810, 842
PsuI	RGATCY	1 cut(s)	607
PsyI	GACNNNGTC	1 cut(s)	296
PvuII	CAGCTG	1 cut(s)	271
RsaI	GTAC	2 cut(s)	50, 692
RsaNI	GTAC	2 cut(s)	49, 691
RseI	CAYNNNNRTG	1 cut(s)	572
SacI	GAGCTC	2 cut(s)	350, 557
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	2 cut(s)	588, 1020
Sau3AI	GATC	5 cut(s)	607, 901, 1117, 1382, 1529
Sau96I	GGNCC	4 cut(s)	82, 292, 1237, 1274
SchI	GAGTC	2 cut(s)	126, 808
ScrFI	CCNGG	5 cut(s)	212, 263, 724, 1089, 1316
SduI	GDGCHC	2 cut(s)	350, 557
SfaNI	GCATC	5 cut(s)	444, 699, 860, 1024, 1364
SfcI	CTRYAG	2 cut(s)	558, 949
SfoI	GGCGCC	1 cut(s)	1372
SfuI	TTCGAA	1 cut(s)	1429
SinI	GGWCC	3 cut(s)	292, 1237, 1274
SmiMI	CAYNNNNRTG	1 cut(s)	572
SmlI	CTYRAG	1 cut(s)	796
SmoI	CTYRAG	1 cut(s)	796
Sse9I	AATT	9 cut(s)	672, 804, 878, 1062, 1083, 1122, 1137, 1267, 1386
SsiI	CCGC	7 cut(s)	21, 142, 360, 441, 515, 700, 898
SspDI	GGCGCC	1 cut(s)	1370
SspMI	CTAG	4 cut(s)	218, 296, 395, 1535
SstI	GAGCTC	2 cut(s)	350, 557
StyD4I	CCNGG	5 cut(s)	210, 261, 722, 1087, 1314
StyI	CCWWGG	3 cut(s)	765, 873, 892
TaaI	ACNGT	2 cut(s)	178, 259
TaiI	ACGT	7 cut(s)	163, 313, 502, 647, 692, 889, 1502
TaqI	TCGA	5 cut(s)	415, 993, 1120, 1181, 1429
TasI	AATT	9 cut(s)	672, 804, 878, 1062, 1083, 1122, 1137, 1267, 1386
TauI	GCSGC	4 cut(s)	144, 363, 518, 900
TfiI	GAWTC	2 cut(s)	417, 544
Tru1I	TTAA	2 cut(s)	588, 1020
Tru9I	TTAA	2 cut(s)	588, 1020
TscAI	CASTG	3 cut(s)	741, 1108, 1211
TseFI	GTSAC	1 cut(s)	562
TseI	GCWGC	7 cut(s)	268, 271, 680, 761, 917, 954, 1403
Tsp45I	GTSAC	1 cut(s)	562
TspDTI	ATGAA	5 cut(s)	499, 831, 1102, 1222, 1584
TspRI	CASTG	3 cut(s)	741, 1108, 1211
Tth111I	GACNNNGTC	1 cut(s)	296
VpaK11BI	GGWCC	3 cut(s)	292, 1237, 1274
XapI	RAATTY	3 cut(s)	878, 1137, 1267
XceI	RCATGY	2 cut(s)	1046, 1580
XmiI	GTMKAC	2 cut(s)	315, 728
XspI	CTAG	4 cut(s)	218, 296, 395, 1535
Zsp2I	ATGCAT	1 cut(s)	1582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.