Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Forward (+)

34338713 .. 34356241

Gene Structure 17529 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG319000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGCGCTAAAGGTGCTTTCCGCCCTTGACACGGCGAAGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTCTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACAAACGTCAACCAAACGACACAGTATTCAACAACAACGACAACAACTTCGTAATCCCGGCGCTAGTCGTTACGGCGCTGGTGGGCTTCCCTCTCCTCGGCACAGTCCTGGGGCAGCTGCTCTTCGGCAGGCTTGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGGTGATGGTGCTGAGCTCCATAGGGTGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGTCAGCCTCGTCTTCTTTCGGTTCCTCCTCGGCGTCGGCATCGGCGGAGACTACCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGGCTGTGTTCTCCATGCAAGGGTTTGGAATTCTGGCGAGCTCTTTAGTGACCATCGTGGTGTGCGCCGTCTTTAACTTTGCGAGCAAGCCGGATCCGAAGAAAGCGACGCCGGACGAGGCTGACATAGCGTGGAGGTTGATACTCATGATCGGTGCAATTCCGGCTGCCATGACATACTATTGGCGGATGATGATGCCTGAAACTGCCAGGTATACAGCACTGGTTGAGCTAAATGTGGTGCAAGCAGCCAAGGATATGGAGAAAGTGTTGGCTGTTTCCTTGAGTCAAATTGCAGAAGATGAACCAGATTTACTATCAGTAGGACAAAACCTTGCATCATCATACCCCTTCTTCTCCAAGGAATTTTTATGTCTCCATGGCCGCGATCTCTTCTCTTGTGCTGCCAACTGGTTTCTTGTTGATGTTGTCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATATCGACCAAAAATACCCAAAATACAAGGTTAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAATATGCTCAACAATTCCAGGATATTGGTTCAGTGTCTTCTTCATTGATCGAATGGGAAGGCGAAAAATTCAAATGATGGGGTTTTTCGTCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAAAATACAGATGTAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACTACATTTATAGTGCCTGCTGAGCTTTTCCCGGCGAGGTTTAGGTCAACTTGTCATGGGATTTCTGGAGCATCGGGGAAGGTTGGCGCCTTGATCGGATCAATTGGATTTCTATGGGCTGCACATGGTCAGAATGAGGAGGATCGAAAGACGAAAGAAATCAAGAGGTCGTTGATGGGTTTAGGTGTAGTTTGTATTCTGGGATTGGTGATGCGCTCAGTTTCTCTGGAGCTTGAGATTCTTGGCAGGCATCAGCACCCTGAATTAACGATTCCCTTTTTAAAGTTGAAGACTGCTTGGCATAATTCAAATAGCTCAACCACCATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

536

Amino Acids

59.73

Weight (kDa)

9.14

Isoelectric Point (pI)

29.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	23 - 505	9.6e-40	Sugar (and other) transporter
MFS_1	PF07690	68 - 460	1.1e-26	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	395
AasI	GACNNNNNNGTC	1 cut(s)	469
Acc36I	ACCTGC	1 cut(s)	395
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	2 cut(s)	48, 1367
AccI	GTMKAC	2 cut(s)	315, 725
AccII	CGCG	1 cut(s)	897
AciI	CCGC	7 cut(s)	21, 142, 360, 441, 512, 697, 895
AclWI	GGATC	4 cut(s)	599, 612, 1387, 1431
AcoI	YGGCCR	2 cut(s)	139, 892
AcsI	RAATTY	4 cut(s)	540, 875, 1134, 1264
AcvI	CACGTG	1 cut(s)	497
AcyI	GRCGYC	4 cut(s)	96, 429, 620, 1368
AfaI	GTAC	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	31, 58, 251, 457, 489, 531
AflIII	ACRYGT	2 cut(s)	310, 494
AgsI	TTSAA	5 cut(s)	58, 184, 1139, 1570, 1590
AjiI	CACGTC	1 cut(s)	311
AjnI	CCWGG	3 cut(s)	261, 719, 1084
AluBI	AGCT	7 cut(s)	271, 348, 552, 742, 1306, 1513, 1596
AluI	AGCT	7 cut(s)	271, 348, 552, 742, 1306, 1513, 1596
Alw21I	GWGCWC	2 cut(s)	350, 554
Alw26I	GTCTC	5 cut(s)	124, 301, 438, 890, 972
AlwI	GGATC	4 cut(s)	599, 612, 1387, 1431
AoxI	GGCC	5 cut(s)	60, 82, 139, 892, 1243
ApeKI	GCWGC	7 cut(s)	268, 271, 677, 758, 914, 951, 1400
ApoI	RAATTY	4 cut(s)	540, 875, 1134, 1264
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
Asp718I	GGTACC	1 cut(s)	48
AspLEI	GCGC	6 cut(s)	7, 217, 232, 578, 1370, 1497
AspS9I	GGNCC	4 cut(s)	82, 292, 1234, 1271
AsuC2I	CCSGG	2 cut(s)	212, 1313
AsuHPI	GGTGA	3 cut(s)	82, 346, 1501
AvaII	GGWCC	3 cut(s)	292, 1234, 1271
BamHI	GGATCC	1 cut(s)	604
BanI	GGYRCC	2 cut(s)	48, 1367
BanII	GRGCYC	2 cut(s)	350, 554
BbrPI	CACGTG	1 cut(s)	497
BbsI	GAAGAC	5 cut(s)	44, 400, 934, 1096, 1577
Bbv12I	GWGCWC	2 cut(s)	350, 554
BbvI	GCAGC	7 cut(s)	258, 280, 664, 770, 901, 963, 1387
BccI	CCATC	9 cut(s)	71, 131, 325, 331, 377, 473, 572, 1138, 1450
BceAI	ACGGC	3 cut(s)	48, 243, 563
BciT130I	CCWGG	3 cut(s)	263, 721, 1086
BciVI	GTATCC	2 cut(s)	125, 1179
BcnI	CCSGG	2 cut(s)	212, 1313
BcoDI	GTCTC	5 cut(s)	124, 301, 438, 890, 972
BfaI	CTAG	3 cut(s)	218, 296, 395
BfmI	CTRYAG	1 cut(s)	946
BfoI	RGCGCY	4 cut(s)	8, 218, 233, 1371
BfuAI	ACCTGC	1 cut(s)	395
BfuI	GTATCC	2 cut(s)	125, 1179
BlpI	GCTNAGC	2 cut(s)	344, 1302
Bme1390I	CCNGG	5 cut(s)	212, 263, 721, 1086, 1313
Bme18I	GGWCC	3 cut(s)	292, 1234, 1271
BmgBI	CACGTC	1 cut(s)	311
BmgT120I	GGNCC	4 cut(s)	82, 292, 1234, 1271
BmiI	GGNNCC	5 cut(s)	50, 293, 419, 606, 1369
BmrFI	CCNGG	5 cut(s)	212, 263, 721, 1086, 1313
BmrI	ACTGGG	1 cut(s)	1213
BmsI	GCATC	7 cut(s)	444, 696, 857, 1021, 1361, 1482, 1540
BmuI	ACTGGG	1 cut(s)	1213
BpiI	GAAGAC	5 cut(s)	44, 400, 934, 1096, 1577
BpmI	CTGGAG	2 cut(s)	1368, 1529
Bpu1102I	GCTNAGC	2 cut(s)	344, 1302
BpuEI	CTTGAG	2 cut(s)	814, 1535
BpuMI	CCSGG	2 cut(s)	212, 1313
BsaAI	YACGTR	1 cut(s)	497
BsaHI	GRCGYC	4 cut(s)	96, 429, 620, 1368
BsaJI	CCNNGG	7 cut(s)	136, 250, 262, 424, 762, 870, 889
BsaXI	ACNNNNNCTCC	2 cut(s)	764, 794
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 58, 251, 457, 489, 531
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	4 cut(s)	738, 926, 964, 1208
Bse3DI	GCAATG	1 cut(s)	50
BseBI	CCWGG	3 cut(s)	263, 721, 1086
BseDI	CCNNGG	7 cut(s)	136, 250, 262, 424, 762, 870, 889
BseGI	GGATG	1 cut(s)	705
BseLI	CCNNNNNNNGG	6 cut(s)	31, 58, 251, 457, 489, 531
BseMI	GCAATG	1 cut(s)	50
BseMII	CTCAG	4 cut(s)	335, 1038, 1293, 1512
BseNI	ACTGG	4 cut(s)	738, 926, 964, 1208
BseRI	GAGGAG	4 cut(s)	125, 239, 413, 1433
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	258, 280, 664, 770, 901, 963, 1387
BsgI	GTGCAG	2 cut(s)	358, 1386
Bsh1236I	CGCG	1 cut(s)	897
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	62, 84, 141, 894, 1245
BshNI	GGYRCC	2 cut(s)	48, 1367
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	350, 554
BsiSI	CCGG	6 cut(s)	75, 212, 602, 623, 674, 1313
BslFI	GGGAC	1 cut(s)	305
BslI	CCNNNNNNNGG	6 cut(s)	31, 58, 251, 457, 489, 531
BsmAI	GTCTC	5 cut(s)	124, 301, 438, 890, 972
BsmBI	CGTCTC	1 cut(s)	301
BsmFI	GGGAC	1 cut(s)	305
BsnI	GGCC	5 cut(s)	62, 84, 141, 894, 1245
Bsp1286I	GDGCHC	2 cut(s)	350, 554
Bsp143I	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
Bsp1720I	GCTNAGC	2 cut(s)	344, 1302
Bsp19I	CCATGG	1 cut(s)	889
BspACI	CCGC	7 cut(s)	21, 142, 360, 441, 512, 697, 895
BspANI	GGCC	5 cut(s)	62, 84, 141, 894, 1245
BspCNI	CTCAG	4 cut(s)	336, 1039, 1294, 1511
BspFNI	CGCG	1 cut(s)	897
BspHI	TCATGA	2 cut(s)	126, 657
BspLI	GGNNCC	5 cut(s)	50, 293, 419, 606, 1369
BspMI	ACCTGC	1 cut(s)	395
BspPI	GGATC	4 cut(s)	599, 612, 1387, 1431
BspQI	GCTCTTC	1 cut(s)	281
BspT107I	GGYRCC	2 cut(s)	48, 1367
BsrDI	GCAATG	1 cut(s)	50
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	4 cut(s)	738, 926, 964, 1208
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	7 cut(s)	136, 250, 262, 424, 762, 870, 889
BssMI	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
BssNAI	GTATAC	1 cut(s)	726
BssNI	GRCGYC	4 cut(s)	96, 429, 620, 1368
BssT1I	CCWWGG	3 cut(s)	762, 870, 889
Bst1107I	GTATAC	1 cut(s)	726
Bst2UI	CCWGG	3 cut(s)	263, 721, 1086
Bst4CI	ACNGT	2 cut(s)	178, 259
Bst6I	CTCTTC	4 cut(s)	92, 113, 281, 908
BstACI	GRCGYC	4 cut(s)	96, 429, 620, 1368
BstBAI	YACGTR	1 cut(s)	497
BstC8I	GCNNGC	9 cut(s)	76, 284, 550, 595, 599, 756, 1056, 1299, 1529
BstDEI	CTNAG	4 cut(s)	344, 1047, 1302, 1498
BstDSI	CCRYGG	1 cut(s)	889
BstF5I	GGATG	1 cut(s)	705
BstFNI	CGCG	1 cut(s)	897
BstH2I	RGCGCY	4 cut(s)	8, 218, 233, 1371
BstHHI	GCGC	6 cut(s)	7, 217, 232, 578, 1370, 1497
BstKTI	GATC	7 cut(s)	607, 663, 901, 1117, 1377, 1382, 1426
BstMAI	GTCTC	5 cut(s)	124, 301, 438, 890, 972
BstMBI	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	4 cut(s)	13, 638, 674, 1303
BstNI	CCWGG	3 cut(s)	263, 721, 1086
BstNSI	RCATGY	1 cut(s)	1043
BstSCI	CCNGG	5 cut(s)	210, 261, 719, 1084, 1311
BstSFI	CTRYAG	1 cut(s)	946
BstUI	CGCG	1 cut(s)	897
BstV1I	GCAGC	7 cut(s)	258, 280, 664, 770, 901, 963, 1387
BstV2I	GAAGAC	5 cut(s)	44, 400, 934, 1096, 1577
BstX2I	RGATCY	1 cut(s)	604
BstXI	CCANNNNNNTGG	2 cut(s)	769, 1092
BstYI	RGATCY	1 cut(s)	604
BstZ17I	GTATAC	1 cut(s)	726
BstZI	CGGCCG	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	125, 1179
BsuRI	GGCC	5 cut(s)	62, 84, 141, 894, 1245
BtgI	CCRYGG	1 cut(s)	889
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	311
BtsCI	GGATG	1 cut(s)	705
BtsIMutI	CAGTG	3 cut(s)	731, 1105, 1201
BveI	ACCTGC	1 cut(s)	395
Cac8I	GCNNGC	9 cut(s)	76, 284, 550, 595, 599, 756, 1056, 1299, 1529
CciI	TCATGA	2 cut(s)	126, 657
CfoI	GCGC	6 cut(s)	7, 217, 232, 578, 1370, 1497
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	4 cut(s)	82, 292, 1234, 1271
CseI	GACGC	5 cut(s)	49, 104, 379, 418, 628
Csp6I	GTAC	1 cut(s)	49
CviQI	GTAC	1 cut(s)	49
DdeI	CTNAG	4 cut(s)	344, 1047, 1302, 1498
DinI	GGCGCC	1 cut(s)	1369
DpnI	GATC	7 cut(s)	606, 662, 900, 1116, 1376, 1381, 1425
DpnII	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
DraI	TTTAAA	1 cut(s)	1563
DrdI	GACNNNNNNGTC	1 cut(s)	469
DseDI	GACNNNNNNGTC	1 cut(s)	469
EaeI	YGGCCR	2 cut(s)	139, 892
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	4 cut(s)	92, 113, 281, 908
EarI	CTCTTC	4 cut(s)	92, 113, 281, 908
EciI	GGCGGA	3 cut(s)	10, 456, 712
Ecl136II	GAGCTC	2 cut(s)	348, 552
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	3 cut(s)	762, 870, 889
Eco24I	GRGCYC	2 cut(s)	350, 554
Eco47I	GGWCC	3 cut(s)	292, 1234, 1271
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	2 cut(s)	348, 552
Eco72I	CACGTG	1 cut(s)	497
EcoICRI	GAGCTC	2 cut(s)	348, 552
EcoO109I	RGGNCCY	1 cut(s)	292
EcoRI	GAATTC	1 cut(s)	540
EcoRII	CCWGG	3 cut(s)	261, 719, 1084
EcoT14I	CCWWGG	3 cut(s)	762, 870, 889
EcoT38I	GRGCYC	2 cut(s)	350, 554
EgeI	GGCGCC	1 cut(s)	1369
EheI	GGCGCC	1 cut(s)	1369
ErhI	CCWWGG	3 cut(s)	762, 870, 889
Esp3I	CGTCTC	1 cut(s)	301
FaqI	GGGAC	1 cut(s)	305
FblI	GTMKAC	2 cut(s)	315, 725
FokI	GGATG	1 cut(s)	712
FriOI	GRGCYC	2 cut(s)	350, 554
FspBI	CTAG	3 cut(s)	218, 296, 395
GlaI	GCGC	6 cut(s)	6, 216, 231, 577, 1369, 1496
GsuI	CTGGAG	2 cut(s)	1368, 1529
HaeII	RGCGCY	4 cut(s)	8, 218, 233, 1371
HaeIII	GGCC	5 cut(s)	62, 84, 141, 894, 1245
HapII	CCGG	6 cut(s)	75, 212, 602, 623, 674, 1313
HgaI	GACGC	5 cut(s)	49, 104, 379, 418, 628
HhaI	GCGC	6 cut(s)	7, 217, 232, 578, 1370, 1497
Hin1I	GRCGYC	4 cut(s)	96, 429, 620, 1368
Hin6I	GCGC	6 cut(s)	5, 215, 230, 576, 1368, 1495
HinP1I	GCGC	6 cut(s)	5, 215, 230, 576, 1368, 1495
HincII	GTYRAC	2 cut(s)	164, 1329
HindII	GTYRAC	2 cut(s)	164, 1329
HinfI	GANTC	4 cut(s)	132, 796, 1519, 1552
HpaII	CCGG	6 cut(s)	75, 212, 602, 623, 674, 1313
HphI	GGTGA	3 cut(s)	82, 346, 1501
Hpy166II	GTNNAC	4 cut(s)	164, 316, 726, 1329
Hpy188I	TCNGA	4 cut(s)	475, 609, 1379, 1413
Hpy188III	TCNNGA	6 cut(s)	127, 658, 1177, 1347, 1444, 1508
Hpy8I	GTNNAC	4 cut(s)	164, 316, 726, 1329
Hpy99I	CGWCG	3 cut(s)	98, 434, 622
HpyAV	CCTTC	3 cut(s)	871, 1119, 1354
HpyCH4III	ACNGT	2 cut(s)	178, 259
HpyCH4IV	ACGT	3 cut(s)	160, 310, 496
HpyF10VI	GCNNNNNNNGC	4 cut(s)	13, 638, 674, 1303
HpyF3I	CTNAG	4 cut(s)	344, 1047, 1302, 1498
HpySE526I	ACGT	3 cut(s)	160, 310, 496
Hsp92I	GRCGYC	4 cut(s)	96, 429, 620, 1368
HspAI	GCGC	6 cut(s)	5, 215, 230, 576, 1368, 1495
KasI	GGCGCC	1 cut(s)	1367
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
LguI	GCTCTTC	1 cut(s)	281
LmnI	GCTCC	3 cut(s)	353, 1349, 1510
Lsp1109I	GCAGC	7 cut(s)	258, 280, 664, 770, 901, 963, 1387
LweI	GCATC	7 cut(s)	444, 696, 857, 1021, 1361, 1482, 1540
MaeI	CTAG	3 cut(s)	218, 296, 395
MaeII	ACGT	3 cut(s)	160, 310, 496
MaeIII	GTNAC	3 cut(s)	223, 559, 1063
MalI	GATC	7 cut(s)	606, 662, 900, 1116, 1376, 1381, 1425
MboI	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
MfeI	CAATTG	2 cut(s)	1059, 1383
MflI	RGATCY	1 cut(s)	604
MhlI	GDGCHC	2 cut(s)	350, 554
Mly113I	GGCGCC	1 cut(s)	1368
MlyI	GAGTC	2 cut(s)	126, 805
MmeI	TCCRAC	1 cut(s)	453
MroNI	GCCGGC	1 cut(s)	74
MseI	TTAA	4 cut(s)	585, 1017, 1547, 1562
MslI	CAYNNNNRTG	1 cut(s)	569
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	6 cut(s)	75, 212, 602, 623, 674, 1313
MspR9I	CCNGG	5 cut(s)	212, 263, 721, 1086, 1313
MunI	CAATTG	2 cut(s)	1059, 1383
MvaI	CCWGG	3 cut(s)	263, 721, 1086
MvnI	CGCG	1 cut(s)	897
MwoI	GCNNNNNNNGC	4 cut(s)	13, 638, 674, 1303
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	1368
NciI	CCSGG	2 cut(s)	212, 1313
NcoI	CCATGG	1 cut(s)	889
NdeII	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	5 cut(s)	50, 293, 419, 606, 1369
NmeAIII	GCCGAG	4 cut(s)	117, 231, 405, 437
NmuCI	GTSAC	1 cut(s)	559
NspI	RCATGY	1 cut(s)	1043
PagI	TCATGA	2 cut(s)	126, 657
PaqCI	CACCTGC	1 cut(s)	395
PciSI	GCTCTTC	1 cut(s)	281
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	2 cut(s)	1519, 1552
PflFI	GACNNNGTC	1 cut(s)	296
PfoI	TCCNGGA	1 cut(s)	1084
PleI	GAGTC	2 cut(s)	126, 804
PluTI	GGCGCC	1 cut(s)	1371
PmaCI	CACGTG	1 cut(s)	497
PmlI	CACGTG	1 cut(s)	497
PpsI	GAGTC	2 cut(s)	126, 804
Ppu21I	YACGTR	1 cut(s)	497
PpuMI	RGGWCCY	1 cut(s)	292
Psp124BI	GAGCTC	2 cut(s)	350, 554
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	3 cut(s)	261, 719, 1084
PspCI	CACGTG	1 cut(s)	497
PspGI	CCWGG	3 cut(s)	261, 719, 1084
PspN4I	GGNNCC	5 cut(s)	50, 293, 419, 606, 1369
PspPI	GGNCC	4 cut(s)	82, 292, 1234, 1271
PspPPI	RGGWCCY	1 cut(s)	292
PsrI	GAACNNNNNNTAC	2 cut(s)	807, 839
PsuI	RGATCY	1 cut(s)	604
PsyI	GACNNNGTC	1 cut(s)	296
PvuII	CAGCTG	1 cut(s)	271
RsaI	GTAC	1 cut(s)	50
RsaNI	GTAC	1 cut(s)	49
RseI	CAYNNNNRTG	1 cut(s)	569
SacI	GAGCTC	2 cut(s)	350, 554
SapI	GCTCTTC	1 cut(s)	281
SaqAI	TTAA	4 cut(s)	585, 1017, 1547, 1562
Sau3AI	GATC	7 cut(s)	604, 660, 898, 1114, 1374, 1379, 1423
Sau96I	GGNCC	4 cut(s)	82, 292, 1234, 1271
SchI	GAGTC	2 cut(s)	126, 805
ScrFI	CCNGG	5 cut(s)	212, 263, 721, 1086, 1313
SduI	GDGCHC	2 cut(s)	350, 554
SfaNI	GCATC	7 cut(s)	444, 696, 857, 1021, 1361, 1482, 1540
SfcI	CTRYAG	1 cut(s)	946
SfoI	GGCGCC	1 cut(s)	1369
SinI	GGWCC	3 cut(s)	292, 1234, 1271
SmiMI	CAYNNNNRTG	1 cut(s)	569
SmlI	CTYRAG	2 cut(s)	793, 1514
SmoI	CTYRAG	2 cut(s)	793, 1514
SsiI	CCGC	7 cut(s)	21, 142, 360, 441, 512, 697, 895
SspDI	GGCGCC	1 cut(s)	1367
SspMI	CTAG	3 cut(s)	218, 296, 395
SstI	GAGCTC	2 cut(s)	350, 554
StyD4I	CCNGG	5 cut(s)	210, 261, 719, 1084, 1311
StyI	CCWWGG	3 cut(s)	762, 870, 889
TaaI	ACNGT	2 cut(s)	178, 259
TaiI	ACGT	3 cut(s)	163, 313, 499
TaqI	TCGA	4 cut(s)	990, 1117, 1178, 1426
TauI	GCSGC	4 cut(s)	144, 363, 515, 897
TfiI	GAWTC	2 cut(s)	1519, 1552
Tru1I	TTAA	4 cut(s)	585, 1017, 1547, 1562
Tru9I	TTAA	4 cut(s)	585, 1017, 1547, 1562
TscAI	CASTG	3 cut(s)	738, 1105, 1208
TseFI	GTSAC	1 cut(s)	559
TseI	GCWGC	7 cut(s)	268, 271, 677, 758, 914, 951, 1400
Tsp45I	GTSAC	1 cut(s)	559
TspDTI	ATGAA	4 cut(s)	496, 828, 1099, 1219
TspRI	CASTG	3 cut(s)	738, 1105, 1208
Tth111I	GACNNNGTC	1 cut(s)	296
VpaK11BI	GGWCC	3 cut(s)	292, 1234, 1271
XapI	RAATTY	4 cut(s)	540, 875, 1134, 1264
XceI	RCATGY	1 cut(s)	1043
XmiI	GTMKAC	2 cut(s)	315, 725
XspI	CTAG	3 cut(s)	218, 296, 395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.