Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Forward (+)

27474433 .. 27478462

Gene Structure 4030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG292500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGGCGCTAAAGGTGCTTTCCGCACTTGACACGGCGAAGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTCTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACGACGACAACAACTTCGTAATCCCGGCGATAGTCGTTACCGCGCTGGTGGGCTTCCCTCTCCTCGGCACCGTCCTGGGGCAGCTGCTCTTCGGCAGGCTCGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGATGATGGTGCTGAGCTCCATAGGGAGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGGCAGCCTCGTCTTCTTCCGGTTCCTCCTCGGCGTCGGCATCGGCGGAGATTATCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGGCTGTGTTCTCCATGCAAGGGTTTGGGATTCTGGCTAGCTCTATAGTGACCACCGTGGTGTGCGCCGTCTTTAACTTTGCGAGCAAGCCGGATCCGGAGAAAGAGACGCCGGACGAGGCTGACATAGCGTGGAGGTTGATACTCATGCTCGGTGCAATTCCGGCTGCCATGACTTACTATTGGCGGATGATGATGCCTGAAACTGCCAGGTATACAGCACTGGTTGAGCTAAATGTGGTGCAAGCAGCCAAGGATATGGAGAAAGTGTTGGCTGTTTCCTTGAGTCAAATTGCAGAAGATGAACCAGATTTACTATCAGTAGGGCAAAACCCTGCATCATCATATCCCTTCTTCTCCAAGGAATTTTTACGTCTCCATGGCCGCGATCTCTTCTCTTGTGCTGCCAACTGGTTTCTTGTTGACGTTGTCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATATCGACCCAAAATACCCAAAAAAGGTCAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAATATGCTCAACAATTCCAGGATATTGGTTCAGTGTCTTCTTCATTGATCGAATTGGAAGGCGAAAAATTCAAATGATGGGGTTTTTCGTCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAAAATACAGATAAAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACCACTTTTATAGTGCCTGCTGAGCTTTTCCCGGCGAGGTTTAGGTCAACTTGTCATGGGATTTCTGGGGCTTCGGGGAAGGTTGGCGCCTTGATCGGATCAATTGGATTTCTATGGGTTGCACATGGTCAAAATGAGGAGGATAAAAAGACGAAAGAGATCAAGAGGTCGTTGATTGGTTTAGGTGTAGTTTGTATTCTGGGATTGGTGGTAACGTATCTCTTCACACCCGAAACTATGGGAAGATCACTAGAAGAGAATGAGAACGAGAATGGGAATGAACAAAATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

512

Amino Acids

56.87

Weight (kDa)

8.29

Isoelectric Point (pI)

27.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	23 - 503	5.3e-48	Sugar (and other) transporter
MFS_1	PF07690	30 - 448	9e-25	Major Facilitator Superfamily
MFS_1	PF07690	336 - 494	1.5e-07	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	362
AasI	GACNNNNNNGTC	1 cut(s)	436
Acc36I	ACCTGC	1 cut(s)	362
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	3 cut(s)	48, 221, 1331
AccBSI	CCGCTC	1 cut(s)	327
AccI	GTMKAC	2 cut(s)	282, 692
AccII	CGCG	2 cut(s)	197, 864
AccIII	TCCGGA	1 cut(s)	574
AciI	CCGC	8 cut(s)	21, 142, 195, 327, 408, 479, 664, 862
AclWI	GGATC	3 cut(s)	566, 579, 1351
AcoI	YGGCCR	2 cut(s)	139, 859
AcsI	RAATTY	3 cut(s)	842, 1098, 1228
AcvI	CACGTG	1 cut(s)	464
AcyI	GRCGYC	4 cut(s)	96, 396, 587, 1332
AfaI	GTAC	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	58, 218, 231, 456, 498, 976
AflIII	ACRYGT	2 cut(s)	277, 461
AgsI	TTSAA	2 cut(s)	58, 1103
AjiI	CACGTC	1 cut(s)	278
AjnI	CCWGG	3 cut(s)	228, 686, 1048
AleI	CACNNNNGTG	1 cut(s)	536
AluBI	AGCT	5 cut(s)	238, 315, 519, 709, 1270
AluI	AGCT	5 cut(s)	238, 315, 519, 709, 1270
Alw21I	GWGCWC	1 cut(s)	317
Alw26I	GTCTC	5 cut(s)	124, 268, 578, 857, 939
AlwI	GGATC	3 cut(s)	566, 579, 1351
Ama87I	CYCGRG	1 cut(s)	254
Aor13HI	TCCGGA	1 cut(s)	574
AoxI	GGCC	5 cut(s)	60, 82, 139, 859, 1207
ApeKI	GCWGC	7 cut(s)	235, 238, 366, 644, 725, 881, 918
ApoI	RAATTY	3 cut(s)	842, 1098, 1228
ArsI	GACNNNNNNTTYG	2 cut(s)	152, 184
Asp718I	GGTACC	1 cut(s)	48
AspA2I	CCTAGG	1 cut(s)	361
AspLEI	GCGC	4 cut(s)	7, 199, 545, 1334
AspS9I	GGNCC	4 cut(s)	82, 259, 1198, 1235
AsuC2I	CCSGG	2 cut(s)	179, 1277
AsuHPI	GGTGA	1 cut(s)	82
AsuNHI	GCTAGC	1 cut(s)	515
AvaI	CYCGRG	1 cut(s)	254
AvaII	GGWCC	3 cut(s)	259, 1198, 1235
AvrII	CCTAGG	1 cut(s)	361
BamHI	GGATCC	1 cut(s)	571
BanI	GGYRCC	3 cut(s)	48, 221, 1331
BanII	GRGCYC	1 cut(s)	317
BbrPI	CACGTG	1 cut(s)	464
BbsI	GAAGAC	4 cut(s)	44, 367, 901, 1060
Bbv12I	GWGCWC	1 cut(s)	317
BbvI	GCAGC	7 cut(s)	225, 247, 378, 631, 737, 868, 930
BccI	CCATC	6 cut(s)	71, 131, 298, 344, 440, 1102
BceAI	ACGGC	2 cut(s)	48, 530
BciT130I	CCWGG	3 cut(s)	230, 688, 1050
BciVI	GTATCC	2 cut(s)	125, 1143
BcnI	CCSGG	2 cut(s)	179, 1277
BcoDI	GTCTC	5 cut(s)	124, 268, 578, 857, 939
BfaI	CTAG	4 cut(s)	263, 362, 516, 1496
BfmI	CTRYAG	2 cut(s)	522, 913
BfoI	RGCGCY	2 cut(s)	8, 1335
BfuAI	ACCTGC	1 cut(s)	362
BfuI	GTATCC	2 cut(s)	125, 1143
BlnI	CCTAGG	1 cut(s)	361
BlpI	GCTNAGC	2 cut(s)	311, 1266
Bme1390I	CCNGG	5 cut(s)	179, 230, 688, 1050, 1277
Bme18I	GGWCC	3 cut(s)	259, 1198, 1235
BmeT110I	CYCGRG	1 cut(s)	254
BmgBI	CACGTC	1 cut(s)	278
BmgT120I	GGNCC	4 cut(s)	82, 259, 1198, 1235
BmiI	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1333
BmrFI	CCNGG	5 cut(s)	179, 230, 688, 1050, 1277
BmrI	ACTGGG	1 cut(s)	1177
BmsI	GCATC	4 cut(s)	411, 663, 824, 985
BmtI	GCTAGC	1 cut(s)	519
BmuI	ACTGGG	1 cut(s)	1177
BpiI	GAAGAC	4 cut(s)	44, 367, 901, 1060
Bpu1102I	GCTNAGC	2 cut(s)	311, 1266
BpuEI	CTTGAG	1 cut(s)	781
BpuMI	CCSGG	2 cut(s)	179, 1277
BsaAI	YACGTR	1 cut(s)	464
BsaHI	GRCGYC	4 cut(s)	96, 396, 587, 1332
BsaJI	CCNNGG	9 cut(s)	136, 217, 229, 361, 391, 534, 729, 837, 856
BsaWI	WCCGGW	2 cut(s)	381, 574
BsaXI	ACNNNNNCTCC	2 cut(s)	731, 761
Bsc4I	CCNNNNNNNGG	6 cut(s)	58, 218, 231, 456, 498, 976
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	4 cut(s)	705, 893, 931, 1172
Bse3DI	GCAATG	1 cut(s)	50
BseAI	TCCGGA	1 cut(s)	574
BseBI	CCWGG	3 cut(s)	230, 688, 1050
BseDI	CCNNGG	9 cut(s)	136, 217, 229, 361, 391, 534, 729, 837, 856
BseGI	GGATG	1 cut(s)	672
BseLI	CCNNNNNNNGG	6 cut(s)	58, 218, 231, 456, 498, 976
BseMI	GCAATG	1 cut(s)	50
BseMII	CTCAG	3 cut(s)	302, 1002, 1257
BseNI	ACTGG	4 cut(s)	705, 893, 931, 1172
BseRI	GAGGAG	4 cut(s)	125, 206, 380, 1397
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	225, 247, 378, 631, 737, 868, 930
BsgI	GTGCAG	1 cut(s)	325
Bsh1236I	CGCG	2 cut(s)	197, 864
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	62, 84, 141, 861, 1209
BshNI	GGYRCC	3 cut(s)	48, 221, 1331
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	1 cut(s)	317
BsiHKCI	CYCGRG	1 cut(s)	254
BsiSI	CCGG	8 cut(s)	75, 179, 382, 569, 575, 590, 641, 1277
BslFI	GGGAC	1 cut(s)	272
BslI	CCNNNNNNNGG	6 cut(s)	58, 218, 231, 456, 498, 976
BsmAI	GTCTC	5 cut(s)	124, 268, 578, 857, 939
BsmBI	CGTCTC	3 cut(s)	268, 578, 857
BsmFI	GGGAC	1 cut(s)	272
BsnI	GGCC	5 cut(s)	62, 84, 141, 861, 1209
BsoBI	CYCGRG	1 cut(s)	254
Bsp1286I	GDGCHC	1 cut(s)	317
Bsp13I	TCCGGA	1 cut(s)	574
Bsp143I	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
Bsp1720I	GCTNAGC	2 cut(s)	311, 1266
Bsp19I	CCATGG	1 cut(s)	856
BspACI	CCGC	8 cut(s)	21, 142, 195, 327, 408, 479, 664, 862
BspANI	GGCC	5 cut(s)	62, 84, 141, 861, 1209
BspCNI	CTCAG	3 cut(s)	303, 1003, 1258
BspEI	TCCGGA	1 cut(s)	574
BspFNI	CGCG	2 cut(s)	197, 864
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1333
BspMI	ACCTGC	1 cut(s)	362
BspOI	GCTAGC	1 cut(s)	519
BspPI	GGATC	3 cut(s)	566, 579, 1351
BspQI	GCTCTTC	1 cut(s)	248
BspT107I	GGYRCC	3 cut(s)	48, 221, 1331
BsrBI	CCGCTC	1 cut(s)	327
BsrDI	GCAATG	1 cut(s)	50
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	4 cut(s)	705, 893, 931, 1172
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	9 cut(s)	136, 217, 229, 361, 391, 534, 729, 837, 856
BssMI	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
BssNAI	GTATAC	1 cut(s)	693
BssNI	GRCGYC	4 cut(s)	96, 396, 587, 1332
BssT1I	CCWWGG	4 cut(s)	361, 729, 837, 856
Bst1107I	GTATAC	1 cut(s)	693
Bst2UI	CCWGG	3 cut(s)	230, 688, 1050
Bst4CI	ACNGT	2 cut(s)	226, 535
Bst6I	CTCTTC	6 cut(s)	92, 113, 248, 875, 1472, 1494
BstACI	GRCGYC	4 cut(s)	96, 396, 587, 1332
BstBAI	YACGTR	1 cut(s)	464
BstC8I	GCNNGC	8 cut(s)	76, 251, 517, 562, 566, 723, 1020, 1263
BstDEI	CTNAG	3 cut(s)	311, 1011, 1266
BstDSI	CCRYGG	2 cut(s)	534, 856
BstF5I	GGATG	1 cut(s)	672
BstFNI	CGCG	2 cut(s)	197, 864
BstH2I	RGCGCY	2 cut(s)	8, 1335
BstHHI	GCGC	4 cut(s)	7, 199, 545, 1334
BstKTI	GATC	7 cut(s)	574, 868, 1081, 1341, 1346, 1407, 1493
BstMAI	GTCTC	5 cut(s)	124, 268, 578, 857, 939
BstMBI	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	5 cut(s)	13, 363, 605, 641, 1267
BstNI	CCWGG	3 cut(s)	230, 688, 1050
BstNSI	RCATGY	1 cut(s)	1007
BstSCI	CCNGG	5 cut(s)	177, 228, 686, 1048, 1275
BstSFI	CTRYAG	2 cut(s)	522, 913
BstUI	CGCG	2 cut(s)	197, 864
BstV1I	GCAGC	7 cut(s)	225, 247, 378, 631, 737, 868, 930
BstV2I	GAAGAC	4 cut(s)	44, 367, 901, 1060
BstX2I	RGATCY	1 cut(s)	571
BstXI	CCANNNNNNTGG	2 cut(s)	736, 1056
BstYI	RGATCY	1 cut(s)	571
BstZ17I	GTATAC	1 cut(s)	693
BstZI	CGGCCG	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	125, 1143
BsuRI	GGCC	5 cut(s)	62, 84, 141, 861, 1209
BtgI	CCRYGG	2 cut(s)	534, 856
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	278
BtsCI	GGATG	1 cut(s)	672
BtsIMutI	CAGTG	3 cut(s)	698, 1069, 1165
BveI	ACCTGC	1 cut(s)	362
Cac8I	GCNNGC	8 cut(s)	76, 251, 517, 562, 566, 723, 1020, 1263
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	4 cut(s)	7, 199, 545, 1334
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	4 cut(s)	82, 259, 1198, 1235
CseI	GACGC	5 cut(s)	49, 104, 346, 385, 595
Csp6I	GTAC	1 cut(s)	49
CviQI	GTAC	1 cut(s)	49
DdeI	CTNAG	3 cut(s)	311, 1011, 1266
DinI	GGCGCC	1 cut(s)	1333
DpnI	GATC	7 cut(s)	573, 867, 1080, 1340, 1345, 1406, 1492
DpnII	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
DrdI	GACNNNNNNGTC	1 cut(s)	436
DseDI	GACNNNNNNGTC	1 cut(s)	436
EaeI	YGGCCR	2 cut(s)	139, 859
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	6 cut(s)	92, 113, 248, 875, 1472, 1494
EarI	CTCTTC	6 cut(s)	92, 113, 248, 875, 1472, 1494
EciI	GGCGGA	2 cut(s)	423, 679
Ecl136II	GAGCTC	1 cut(s)	315
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	4 cut(s)	361, 729, 837, 856
Eco24I	GRGCYC	1 cut(s)	317
Eco47I	GGWCC	3 cut(s)	259, 1198, 1235
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	1 cut(s)	315
Eco72I	CACGTG	1 cut(s)	464
Eco88I	CYCGRG	1 cut(s)	254
EcoICRI	GAGCTC	1 cut(s)	315
EcoO109I	RGGNCCY	1 cut(s)	259
EcoRII	CCWGG	3 cut(s)	228, 686, 1048
EcoT14I	CCWWGG	4 cut(s)	361, 729, 837, 856
EcoT22I	ATGCAT	1 cut(s)	1537
EcoT38I	GRGCYC	1 cut(s)	317
EgeI	GGCGCC	1 cut(s)	1333
EheI	GGCGCC	1 cut(s)	1333
ErhI	CCWWGG	4 cut(s)	361, 729, 837, 856
Esp3I	CGTCTC	3 cut(s)	268, 578, 857
FaqI	GGGAC	1 cut(s)	272
FblI	GTMKAC	2 cut(s)	282, 692
FokI	GGATG	1 cut(s)	679
FriOI	GRGCYC	1 cut(s)	317
FspBI	CTAG	4 cut(s)	263, 362, 516, 1496
GlaI	GCGC	4 cut(s)	6, 198, 544, 1333
HaeII	RGCGCY	2 cut(s)	8, 1335
HaeIII	GGCC	5 cut(s)	62, 84, 141, 861, 1209
HapII	CCGG	8 cut(s)	75, 179, 382, 569, 575, 590, 641, 1277
HgaI	GACGC	5 cut(s)	49, 104, 346, 385, 595
HhaI	GCGC	4 cut(s)	7, 199, 545, 1334
Hin1I	GRCGYC	4 cut(s)	96, 396, 587, 1332
Hin6I	GCGC	4 cut(s)	5, 197, 543, 1332
HinP1I	GCGC	4 cut(s)	5, 197, 543, 1332
HincII	GTYRAC	2 cut(s)	901, 1293
HindII	GTYRAC	2 cut(s)	901, 1293
HinfI	GANTC	3 cut(s)	132, 508, 763
HpaII	CCGG	8 cut(s)	75, 179, 382, 569, 575, 590, 641, 1277
HphI	GGTGA	1 cut(s)	82
Hpy166II	GTNNAC	4 cut(s)	283, 693, 901, 1293
Hpy188I	TCNGA	2 cut(s)	442, 1343
Hpy188III	TCNNGA	4 cut(s)	127, 575, 1141, 1408
Hpy8I	GTNNAC	4 cut(s)	283, 693, 901, 1293
Hpy99I	CGWCG	3 cut(s)	98, 161, 401
HpyAV	CCTTC	3 cut(s)	838, 1083, 1318
HpyCH4III	ACNGT	2 cut(s)	226, 535
HpyCH4IV	ACGT	5 cut(s)	277, 463, 850, 903, 1460
HpyF10VI	GCNNNNNNNGC	5 cut(s)	13, 363, 605, 641, 1267
HpyF3I	CTNAG	3 cut(s)	311, 1011, 1266
HpySE526I	ACGT	5 cut(s)	277, 463, 850, 903, 1460
Hsp92I	GRCGYC	4 cut(s)	96, 396, 587, 1332
HspAI	GCGC	4 cut(s)	5, 197, 543, 1332
KasI	GGCGCC	1 cut(s)	1331
Kpn2I	TCCGGA	1 cut(s)	574
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
LguI	GCTCTTC	1 cut(s)	248
LmnI	GCTCC	2 cut(s)	320, 324
Lsp1109I	GCAGC	7 cut(s)	225, 247, 378, 631, 737, 868, 930
LweI	GCATC	4 cut(s)	411, 663, 824, 985
MaeI	CTAG	4 cut(s)	263, 362, 516, 1496
MaeII	ACGT	5 cut(s)	277, 463, 850, 903, 1460
MaeIII	GTNAC	4 cut(s)	190, 526, 1027, 1456
MalI	GATC	7 cut(s)	573, 867, 1080, 1340, 1345, 1406, 1492
MbiI	CCGCTC	1 cut(s)	327
MboI	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
MfeI	CAATTG	2 cut(s)	1023, 1347
MflI	RGATCY	1 cut(s)	571
MhlI	GDGCHC	1 cut(s)	317
MluCI	AATT	9 cut(s)	636, 768, 842, 1023, 1044, 1083, 1098, 1228, 1347
Mly113I	GGCGCC	1 cut(s)	1332
MlyI	GAGTC	2 cut(s)	126, 772
MmeI	TCCRAC	1 cut(s)	420
Mph1103I	ATGCAT	1 cut(s)	1537
MroI	TCCGGA	1 cut(s)	574
MroNI	GCCGGC	1 cut(s)	74
MseI	TTAA	1 cut(s)	552
MslI	CAYNNNNRTG	1 cut(s)	536
MspA1I	CMGCKG	1 cut(s)	238
MspI	CCGG	8 cut(s)	75, 179, 382, 569, 575, 590, 641, 1277
MspR9I	CCNGG	5 cut(s)	179, 230, 688, 1050, 1277
MunI	CAATTG	2 cut(s)	1023, 1347
MvaI	CCWGG	3 cut(s)	230, 688, 1050
MvnI	CGCG	2 cut(s)	197, 864
MwoI	GCNNNNNNNGC	5 cut(s)	13, 363, 605, 641, 1267
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	1332
NciI	CCSGG	2 cut(s)	179, 1277
NcoI	CCATGG	1 cut(s)	856
NdeII	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
NgoMIV	GCCGGC	1 cut(s)	74
NheI	GCTAGC	1 cut(s)	515
NlaIV	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1333
NmeAIII	GCCGAG	4 cut(s)	117, 198, 372, 404
NmuCI	GTSAC	1 cut(s)	526
NsiI	ATGCAT	1 cut(s)	1537
NspI	RCATGY	1 cut(s)	1007
OliI	CACNNNNGTG	1 cut(s)	536
PagI	TCATGA	1 cut(s)	126
PaqCI	CACCTGC	1 cut(s)	362
PciSI	GCTCTTC	1 cut(s)	248
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	1 cut(s)	508
PflFI	GACNNNGTC	2 cut(s)	263, 905
PfoI	TCCNGGA	1 cut(s)	1048
PleI	GAGTC	2 cut(s)	126, 771
PluTI	GGCGCC	1 cut(s)	1335
PmaCI	CACGTG	1 cut(s)	464
PmlI	CACGTG	1 cut(s)	464
PpsI	GAGTC	2 cut(s)	126, 771
Ppu21I	YACGTR	1 cut(s)	464
PpuMI	RGGWCCY	1 cut(s)	259
Psp124BI	GAGCTC	1 cut(s)	317
Psp5II	RGGWCCY	1 cut(s)	259
Psp6I	CCWGG	3 cut(s)	228, 686, 1048
PspCI	CACGTG	1 cut(s)	464
PspGI	CCWGG	3 cut(s)	228, 686, 1048
PspN4I	GGNNCC	6 cut(s)	50, 223, 260, 386, 573, 1333
PspPI	GGNCC	4 cut(s)	82, 259, 1198, 1235
PspPPI	RGGWCCY	1 cut(s)	259
PsrI	GAACNNNNNNTAC	2 cut(s)	774, 806
PsuI	RGATCY	1 cut(s)	571
PsyI	GACNNNGTC	2 cut(s)	263, 905
PvuII	CAGCTG	1 cut(s)	238
RsaI	GTAC	1 cut(s)	50
RsaNI	GTAC	1 cut(s)	49
RseI	CAYNNNNRTG	1 cut(s)	536
SacI	GAGCTC	1 cut(s)	317
SapI	GCTCTTC	1 cut(s)	248
SaqAI	TTAA	1 cut(s)	552
Sau3AI	GATC	7 cut(s)	571, 865, 1078, 1338, 1343, 1404, 1490
Sau96I	GGNCC	4 cut(s)	82, 259, 1198, 1235
SchI	GAGTC	2 cut(s)	126, 772
ScrFI	CCNGG	5 cut(s)	179, 230, 688, 1050, 1277
SduI	GDGCHC	1 cut(s)	317
SfaNI	GCATC	4 cut(s)	411, 663, 824, 985
SfcI	CTRYAG	2 cut(s)	522, 913
SfoI	GGCGCC	1 cut(s)	1333
SinI	GGWCC	3 cut(s)	259, 1198, 1235
SmiMI	CAYNNNNRTG	1 cut(s)	536
SmlI	CTYRAG	1 cut(s)	760
SmoI	CTYRAG	1 cut(s)	760
Sse9I	AATT	9 cut(s)	636, 768, 842, 1023, 1044, 1083, 1098, 1228, 1347
SsiI	CCGC	8 cut(s)	21, 142, 195, 327, 408, 479, 664, 862
SspDI	GGCGCC	1 cut(s)	1331
SspMI	CTAG	4 cut(s)	263, 362, 516, 1496
SstI	GAGCTC	1 cut(s)	317
StyD4I	CCNGG	5 cut(s)	177, 228, 686, 1048, 1275
StyI	CCWWGG	4 cut(s)	361, 729, 837, 856
TaaI	ACNGT	2 cut(s)	226, 535
TaiI	ACGT	5 cut(s)	280, 466, 853, 906, 1463
TaqI	TCGA	3 cut(s)	957, 1081, 1142
TasI	AATT	9 cut(s)	636, 768, 842, 1023, 1044, 1083, 1098, 1228, 1347
TauI	GCSGC	4 cut(s)	144, 330, 482, 864
TfiI	GAWTC	1 cut(s)	508
Tru1I	TTAA	1 cut(s)	552
Tru9I	TTAA	1 cut(s)	552
TscAI	CASTG	3 cut(s)	705, 1069, 1172
TseFI	GTSAC	1 cut(s)	526
TseI	GCWGC	7 cut(s)	235, 238, 366, 644, 725, 881, 918
Tsp45I	GTSAC	1 cut(s)	526
TspDTI	ATGAA	5 cut(s)	463, 795, 1063, 1183, 1539
TspRI	CASTG	3 cut(s)	705, 1069, 1172
Tth111I	GACNNNGTC	2 cut(s)	263, 905
VpaK11BI	GGWCC	3 cut(s)	259, 1198, 1235
XapI	RAATTY	3 cut(s)	842, 1098, 1228
XceI	RCATGY	1 cut(s)	1007
XmaJI	CCTAGG	1 cut(s)	361
XmiI	GTMKAC	2 cut(s)	282, 692
XspI	CTAG	4 cut(s)	263, 362, 516, 1496
Zsp2I	ATGCAT	1 cut(s)	1537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.