Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005048

Physical Location & Seq

Genomic Coordinates Forward (+)

27439767 .. 27445966

Gene Structure 6200 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG292100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGCGCTAAAGGTGCTTTCCGCCCTTGACACGGCGAAGACGCAATGGTACCACTTCAAGGCCATCATCATCGCCGGCATGGGCCTCTTCACCGACGCCTACGACCTCTTCTGTATCCCTCCCATCATGAGACTCCTCGGCCGCATATACTACAACAAACGTCAACCAAACGACAACAACTTCGTAATCCCGGCGCTAGTCGTTATGGCGCTGGTGGGCTTCCCTCTCCTCGGCACCGTCCTGGGGCAGCTGCTCTTCGGCAGGCTTGGGGACCTAGTCGGTAGGAGACGTGTCTACGGGCTTTCGCTGATGGTGATGGTGCTGAGCTCCATAGGGTGCGGCTTCTCCATCTGCACCTCCCCCACCTGCGTCCTAGTCAGCCTCGTCTTCTTTCGGTTCCTCCTCGGCGTCGGCATCGGCGGAGACTACCCCCTCTCGGCGACCATCATGTCGGAGTTTGCCAACAAGAGGACACGTGGCTCGTTCATAGCGGCTGTGTTCTCCATGCAAGGGTTTGGGATTCTGGCGAGCTCTATAGTGACCATCGTGGTGTGCGCCGTCTTTAACTTTGCGAGCAAGCCGGATCCGGAGAAAGCGACGCCGGATGAGGCTGACATAGTGTGGAGGTTGATACTCATGCTCGGTGCAATTCCGGCTGCCATGACGTACTATTGGCGGATGATGATGCCTGAAACTGCCAGGTATACAGCACTGGTTGAGCTAAATGTGGTGCAAGCAGCCAAGGATATGGAGAAAGTGTTGGCTGTTTCCTTGAGTCAAATTGCAGAAGATAAAAAAGATTTACTATCAGTAGGAAAAAACCCTGCATCATCATATCCCTTCTTCTCCAAGGAATTTTTACGTCTCCATGGCCGCGATCTCTTCTCTTGTGCTGCCAACTGGTTTCTTGTTGATGTTGTCTTCTACAGCAGCAACCTATTCCAGTCTCAAATATATAGAAGATATCTCGACAAAAAATACGATGTCAATCTCTACCAAGATGCTTTGCATGTTGCTGAGTTGCAAGCAATTGTTACAGTATGCTCCACAATTCCAGGGTATTGGTTCACTGTCTACTTCATTGATCGAATTGGAAGGCGAAAAATTCAAATGATGGGATTTTTTGCCATGGCACTTGTTTATTTCTCGATTGGGATACCCTACAAAACTCACTGGGCAAAACACACAGATGAAGGTTTCATGGTCCTCTATGGCCTCACTTTCTTCTTTGCAAATTTTGGACCAAATACTACTACATTTATAGTGCCTGCTGAGCTTTTCCCAGCGAGGTTTAGGTCAACTTGTCATGGGATTTCTGGAGCATCGGGGAAGGTTGGCGCCATGATCGGATCAATTGGATTTCTATGGGCTGCACATGGTGAGAATGAGGAGGTTCAAAAGACGAAAGAAATCAAGTGGTCGTTGATGGGTTTAGGTGTAATTGAGCATCCAGTTCGACAGTTAGACGAGCGACTGGTGTGCAAAGTTGGCGTGACCCATTTTGATCTCGACACGTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006817 GO:0006820 GO:0008150 GO:0008509 GO:0015075 GO:0015103 GO:0015114 GO:0015318 GO:0015399 GO:0015405 GO:0015415 GO:0015698 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0034220 GO:0035435 GO:0042623 GO:0042626 GO:0043225 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0098656 GO:0098660 GO:0098661 GO:0099133 GO:1901684

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

506

Amino Acids

56.52

Weight (kDa)

8.89

Isoelectric Point (pI)

26.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	23 - 460	5.1e-42	Sugar (and other) transporter
MFS_1	PF07690	30 - 450	3.2e-27	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76430
fragaria_vesca	FvH4_5g25990
malus_domestica	MD06G1004700.v1.1
prunus_persica	Prupe.5G006100_v2.0.a1
pyrus_communis	pycom02g23840 pycom06g00430
rosa_chinensis	RchiOBHm_Chr7g0216571 RchiOBHm_Chr7g0216601 RchiOBHm_Chr7g0216611
rosa_laevigata	RLG00000002554 RLG00000002559 RLG00000002561 RLG00000002563
rosa_multiflora	Rmu_co7979128.1_g000001 Rmu_sc0014840.1_g000003 Rmu_sc0016363.1_g000001
rosa_roxburghii	Rroxscaffold_3G00243070 Rroxscaffold_3G00243100 Rroxscaffold_5G00337960
rosa_rugosa	Rorug07G0160800 Rorug07G0160900
rosa_samantha	Rh7AG300600 Rh7AG301000 Rh7BG292100 Rh7BG292500 Rh7CG319000 Rh7CG319600 Rh7DG301600
rosa_wichuraiana	Rw7G025530 Rw7G025540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	374
AasI	GACNNNNNNGTC	1 cut(s)	448
Acc36I	ACCTGC	1 cut(s)	374
Acc65I	GGTACC	1 cut(s)	48
AccB1I	GGYRCC	3 cut(s)	48, 233, 1337
AccI	GTMKAC	3 cut(s)	294, 704, 1074
AccII	CGCG	1 cut(s)	876
AccIII	TCCGGA	1 cut(s)	586
AciI	CCGC	7 cut(s)	21, 142, 339, 420, 491, 676, 874
AclWI	GGATC	3 cut(s)	578, 591, 1357
AcoI	YGGCCR	2 cut(s)	139, 871
AcsI	RAATTY	3 cut(s)	854, 1104, 1234
AcvI	CACGTG	1 cut(s)	476
AcyI	GRCGYC	4 cut(s)	96, 408, 599, 1338
AdeI	CACNNNGTG	1 cut(s)	1379
AfaI	GTAC	2 cut(s)	50, 668
AfiI	CCNNNNNNNGG	7 cut(s)	31, 58, 230, 243, 436, 468, 510
AflIII	ACRYGT	3 cut(s)	289, 473, 1512
AgsI	TTSAA	3 cut(s)	58, 1109, 1397
AjiI	CACGTC	1 cut(s)	290
AjnI	CCWGG	3 cut(s)	240, 698, 1054
AluBI	AGCT	5 cut(s)	250, 327, 531, 721, 1276
AluI	AGCT	5 cut(s)	250, 327, 531, 721, 1276
Alw21I	GWGCWC	2 cut(s)	329, 533
Alw26I	GTCTC	5 cut(s)	124, 280, 417, 869, 951
AlwI	GGATC	3 cut(s)	578, 591, 1357
Aor13HI	TCCGGA	1 cut(s)	586
AoxI	GGCC	5 cut(s)	60, 82, 139, 871, 1213
ApeKI	GCWGC	7 cut(s)	247, 250, 656, 737, 893, 930, 1370
ApoI	RAATTY	3 cut(s)	854, 1104, 1234
ArsI	GACNNNNNNTTYG	2 cut(s)	164, 196
Asp718I	GGTACC	1 cut(s)	48
AspLEI	GCGC	5 cut(s)	7, 196, 211, 557, 1340
AspS9I	GGNCC	4 cut(s)	82, 271, 1204, 1241
AsuC2I	CCSGG	1 cut(s)	191
AsuHPI	GGTGA	3 cut(s)	82, 325, 1391
AvaII	GGWCC	3 cut(s)	271, 1204, 1241
BamHI	GGATCC	1 cut(s)	583
BanI	GGYRCC	3 cut(s)	48, 233, 1337
BanII	GRGCYC	2 cut(s)	329, 533
BbrPI	CACGTG	1 cut(s)	476
BbsI	GAAGAC	3 cut(s)	44, 379, 913
Bbv12I	GWGCWC	2 cut(s)	329, 533
BbvI	GCAGC	7 cut(s)	237, 259, 643, 749, 880, 942, 1357
BccI	CCATC	9 cut(s)	71, 131, 304, 310, 356, 452, 551, 1108, 1420
BceAI	ACGGC	2 cut(s)	48, 542
BcgI	CGANNNNNNTGC	4 cut(s)	1436, 1461, 1470, 1495
BciT130I	CCWGG	3 cut(s)	242, 700, 1056
BciVI	GTATCC	2 cut(s)	125, 1149
BcnI	CCSGG	1 cut(s)	191
BcoDI	GTCTC	5 cut(s)	124, 280, 417, 869, 951
BfaI	CTAG	3 cut(s)	197, 275, 374
BfmI	CTRYAG	2 cut(s)	534, 925
BfoI	RGCGCY	4 cut(s)	8, 197, 212, 1341
BfuAI	ACCTGC	1 cut(s)	374
BfuI	GTATCC	2 cut(s)	125, 1149
BlpI	GCTNAGC	2 cut(s)	323, 1272
Bme1390I	CCNGG	4 cut(s)	191, 242, 700, 1056
Bme18I	GGWCC	3 cut(s)	271, 1204, 1241
BmgBI	CACGTC	1 cut(s)	290
BmgT120I	GGNCC	4 cut(s)	82, 271, 1204, 1241
BmiI	GGNNCC	6 cut(s)	50, 235, 272, 398, 585, 1339
BmrFI	CCNGG	4 cut(s)	191, 242, 700, 1056
BmrI	ACTGGG	1 cut(s)	1183
BmsI	GCATC	6 cut(s)	423, 675, 836, 991, 1331, 1456
BmuI	ACTGGG	1 cut(s)	1183
BpiI	GAAGAC	3 cut(s)	44, 379, 913
BpmI	CTGGAG	1 cut(s)	1338
Bpu1102I	GCTNAGC	2 cut(s)	323, 1272
BpuEI	CTTGAG	1 cut(s)	793
BpuMI	CCSGG	1 cut(s)	191
BsaAI	YACGTR	1 cut(s)	476
BsaBI	GATNNNNATC	1 cut(s)	987
BsaHI	GRCGYC	4 cut(s)	96, 408, 599, 1338
BsaJI	CCNNGG	9 cut(s)	136, 229, 241, 403, 741, 849, 868, 1055, 1128
BsaWI	WCCGGW	1 cut(s)	586
BsaXI	ACNNNNNCTCC	2 cut(s)	743, 773
Bsc4I	CCNNNNNNNGG	7 cut(s)	31, 58, 230, 243, 436, 468, 510
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	6 cut(s)	717, 905, 943, 1178, 1451, 1479
Bse3DI	GCAATG	1 cut(s)	50
Bse8I	GATNNNNATC	1 cut(s)	987
BseAI	TCCGGA	1 cut(s)	586
BseBI	CCWGG	3 cut(s)	242, 700, 1056
BseDI	CCNNGG	9 cut(s)	136, 229, 241, 403, 741, 849, 868, 1055, 1128
BseGI	GGATG	3 cut(s)	610, 684, 1447
BseJI	GATNNNNATC	1 cut(s)	987
BseLI	CCNNNNNNNGG	7 cut(s)	31, 58, 230, 243, 436, 468, 510
BseMI	GCAATG	1 cut(s)	50
BseMII	CTCAG	3 cut(s)	314, 1008, 1263
BseNI	ACTGG	6 cut(s)	717, 905, 943, 1178, 1451, 1479
BseRI	GAGGAG	4 cut(s)	125, 218, 392, 1403
BseX3I	CGGCCG	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	237, 259, 643, 749, 880, 942, 1357
BseYI	CCCAGC	1 cut(s)	1282
BsgI	GTGCAG	2 cut(s)	337, 1356
Bsh1236I	CGCG	1 cut(s)	876
Bsh1285I	CGRYCG	1 cut(s)	142
BshFI	GGCC	5 cut(s)	62, 84, 141, 873, 1215
BshNI	GGYRCC	3 cut(s)	48, 233, 1337
BsiEI	CGRYCG	1 cut(s)	142
BsiHKAI	GWGCWC	2 cut(s)	329, 533
BsiSI	CCGG	6 cut(s)	75, 191, 581, 587, 602, 653
BslFI	GGGAC	1 cut(s)	284
BslI	CCNNNNNNNGG	7 cut(s)	31, 58, 230, 243, 436, 468, 510
BsmAI	GTCTC	5 cut(s)	124, 280, 417, 869, 951
BsmBI	CGTCTC	2 cut(s)	280, 869
BsmFI	GGGAC	1 cut(s)	284
BsnI	GGCC	5 cut(s)	62, 84, 141, 873, 1215
Bsp1286I	GDGCHC	2 cut(s)	329, 533
Bsp13I	TCCGGA	1 cut(s)	586
Bsp143I	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
Bsp1720I	GCTNAGC	2 cut(s)	323, 1272
Bsp19I	CCATGG	2 cut(s)	868, 1128
BspACI	CCGC	7 cut(s)	21, 142, 339, 420, 491, 676, 874
BspANI	GGCC	5 cut(s)	62, 84, 141, 873, 1215
BspCNI	CTCAG	3 cut(s)	315, 1009, 1264
BspEI	TCCGGA	1 cut(s)	586
BspFNI	CGCG	1 cut(s)	876
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	6 cut(s)	50, 235, 272, 398, 585, 1339
BspMI	ACCTGC	1 cut(s)	374
BspPI	GGATC	3 cut(s)	578, 591, 1357
BspQI	GCTCTTC	1 cut(s)	260
BspT107I	GGYRCC	3 cut(s)	48, 233, 1337
BsrDI	GCAATG	1 cut(s)	50
BsrFI	RCCGGY	1 cut(s)	74
BsrI	ACTGG	6 cut(s)	717, 905, 943, 1178, 1451, 1479
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	9 cut(s)	136, 229, 241, 403, 741, 849, 868, 1055, 1128
BssMI	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
BssNAI	GTATAC	1 cut(s)	705
BssNI	GRCGYC	4 cut(s)	96, 408, 599, 1338
BssT1I	CCWWGG	4 cut(s)	741, 849, 868, 1128
Bst1107I	GTATAC	1 cut(s)	705
Bst2UI	CCWGG	3 cut(s)	242, 700, 1056
Bst4CI	ACNGT	4 cut(s)	238, 1039, 1072, 1461
Bst6I	CTCTTC	4 cut(s)	92, 113, 260, 887
BstACI	GRCGYC	4 cut(s)	96, 408, 599, 1338
BstBAI	YACGTR	1 cut(s)	476
BstC8I	GCNNGC	8 cut(s)	76, 263, 529, 574, 578, 735, 1026, 1269
BstDEI	CTNAG	3 cut(s)	323, 1017, 1272
BstDSI	CCRYGG	2 cut(s)	868, 1128
BstF5I	GGATG	3 cut(s)	610, 684, 1447
BstFNI	CGCG	1 cut(s)	876
BstH2I	RGCGCY	4 cut(s)	8, 197, 212, 1341
BstHHI	GCGC	5 cut(s)	7, 196, 211, 557, 1340
BstKTI	GATC	6 cut(s)	586, 880, 1087, 1347, 1352, 1507
BstMAI	GTCTC	5 cut(s)	124, 280, 417, 869, 951
BstMBI	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
BstMCI	CGRYCG	1 cut(s)	142
BstMWI	GCNNNNNNNGC	4 cut(s)	13, 653, 1273, 1488
BstNI	CCWGG	3 cut(s)	242, 700, 1056
BstNSI	RCATGY	1 cut(s)	1013
BstSCI	CCNGG	4 cut(s)	189, 240, 698, 1054
BstSFI	CTRYAG	2 cut(s)	534, 925
BstUI	CGCG	1 cut(s)	876
BstV1I	GCAGC	7 cut(s)	237, 259, 643, 749, 880, 942, 1357
BstV2I	GAAGAC	3 cut(s)	44, 379, 913
BstX2I	RGATCY	1 cut(s)	583
BstXI	CCANNNNNNTGG	2 cut(s)	748, 1062
BstYI	RGATCY	1 cut(s)	583
BstZ17I	GTATAC	1 cut(s)	705
BstZI	CGGCCG	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	125, 1149
BsuRI	GGCC	5 cut(s)	62, 84, 141, 873, 1215
BtgI	CCRYGG	2 cut(s)	868, 1128
BtgZI	GCGATG	1 cut(s)	55
BtrI	CACGTC	1 cut(s)	290
BtsCI	GGATG	3 cut(s)	610, 684, 1447
BtsIMutI	CAGTG	3 cut(s)	710, 1068, 1171
BveI	ACCTGC	1 cut(s)	374
Cac8I	GCNNGC	8 cut(s)	76, 263, 529, 574, 578, 735, 1026, 1269
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	5 cut(s)	7, 196, 211, 557, 1340
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	4 cut(s)	82, 271, 1204, 1241
CseI	GACGC	5 cut(s)	49, 104, 358, 397, 607
Csp6I	GTAC	2 cut(s)	49, 667
CviQI	GTAC	2 cut(s)	49, 667
DdeI	CTNAG	3 cut(s)	323, 1017, 1272
DinI	GGCGCC	1 cut(s)	1339
DpnI	GATC	6 cut(s)	585, 879, 1086, 1346, 1351, 1506
DpnII	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
DraIII	CACNNNGTG	1 cut(s)	1379
DrdI	GACNNNNNNGTC	1 cut(s)	448
DseDI	GACNNNNNNGTC	1 cut(s)	448
EaeI	YGGCCR	2 cut(s)	139, 871
EagI	CGGCCG	1 cut(s)	139
Eam1104I	CTCTTC	4 cut(s)	92, 113, 260, 887
EarI	CTCTTC	4 cut(s)	92, 113, 260, 887
EciI	GGCGGA	3 cut(s)	10, 435, 691
Ecl136II	GAGCTC	2 cut(s)	327, 531
EclXI	CGGCCG	1 cut(s)	139
Eco130I	CCWWGG	4 cut(s)	741, 849, 868, 1128
Eco24I	GRGCYC	2 cut(s)	329, 533
Eco32I	GATATC	1 cut(s)	965
Eco47I	GGWCC	3 cut(s)	271, 1204, 1241
Eco52I	CGGCCG	1 cut(s)	139
Eco53kI	GAGCTC	2 cut(s)	327, 531
Eco72I	CACGTG	1 cut(s)	476
EcoICRI	GAGCTC	2 cut(s)	327, 531
EcoO109I	RGGNCCY	1 cut(s)	271
EcoRII	CCWGG	3 cut(s)	240, 698, 1054
EcoRV	GATATC	1 cut(s)	965
EcoT14I	CCWWGG	4 cut(s)	741, 849, 868, 1128
EcoT38I	GRGCYC	2 cut(s)	329, 533
EgeI	GGCGCC	1 cut(s)	1339
EheI	GGCGCC	1 cut(s)	1339
ErhI	CCWWGG	4 cut(s)	741, 849, 868, 1128
Esp3I	CGTCTC	2 cut(s)	280, 869
FaqI	GGGAC	1 cut(s)	284
FblI	GTMKAC	3 cut(s)	294, 704, 1074
FokI	GGATG	3 cut(s)	617, 691, 1434
FriOI	GRGCYC	2 cut(s)	329, 533
FspBI	CTAG	3 cut(s)	197, 275, 374
GlaI	GCGC	5 cut(s)	6, 195, 210, 556, 1339
GsaI	CCCAGC	1 cut(s)	1286
GsuI	CTGGAG	1 cut(s)	1338
HaeII	RGCGCY	4 cut(s)	8, 197, 212, 1341
HaeIII	GGCC	5 cut(s)	62, 84, 141, 873, 1215
HapII	CCGG	6 cut(s)	75, 191, 581, 587, 602, 653
HgaI	GACGC	5 cut(s)	49, 104, 358, 397, 607
HhaI	GCGC	5 cut(s)	7, 196, 211, 557, 1340
Hin1I	GRCGYC	4 cut(s)	96, 408, 599, 1338
Hin6I	GCGC	5 cut(s)	5, 194, 209, 555, 1338
HinP1I	GCGC	5 cut(s)	5, 194, 209, 555, 1338
HincII	GTYRAC	2 cut(s)	164, 1299
HindII	GTYRAC	2 cut(s)	164, 1299
HinfI	GANTC	3 cut(s)	132, 520, 775
HpaII	CCGG	6 cut(s)	75, 191, 581, 587, 602, 653
HphI	GGTGA	3 cut(s)	82, 325, 1391
Hpy166II	GTNNAC	6 cut(s)	164, 295, 705, 1068, 1075, 1299
Hpy188I	TCNGA	2 cut(s)	454, 1349
Hpy188III	TCNNGA	6 cut(s)	127, 587, 968, 1147, 1317, 1508
Hpy8I	GTNNAC	6 cut(s)	164, 295, 705, 1068, 1075, 1299
Hpy99I	CGWCG	3 cut(s)	98, 413, 601
HpyAV	CCTTC	4 cut(s)	850, 1089, 1187, 1324
HpyCH4III	ACNGT	4 cut(s)	238, 1039, 1072, 1461
HpyCH4IV	ACGT	6 cut(s)	160, 289, 475, 665, 862, 1514
HpyF10VI	GCNNNNNNNGC	4 cut(s)	13, 653, 1273, 1488
HpyF3I	CTNAG	3 cut(s)	323, 1017, 1272
HpySE526I	ACGT	6 cut(s)	160, 289, 475, 665, 862, 1514
Hsp92I	GRCGYC	4 cut(s)	96, 408, 599, 1338
HspAI	GCGC	5 cut(s)	5, 194, 209, 555, 1338
KasI	GGCGCC	1 cut(s)	1337
Kpn2I	TCCGGA	1 cut(s)	586
KpnI	GGTACC	1 cut(s)	52
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Kzo9I	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
LguI	GCTCTTC	1 cut(s)	260
LmnI	GCTCC	3 cut(s)	332, 1049, 1319
Lsp1109I	GCAGC	7 cut(s)	237, 259, 643, 749, 880, 942, 1357
LweI	GCATC	6 cut(s)	423, 675, 836, 991, 1331, 1456
MaeI	CTAG	3 cut(s)	197, 275, 374
MaeII	ACGT	6 cut(s)	160, 289, 475, 665, 862, 1514
MaeIII	GTNAC	3 cut(s)	538, 1033, 1492
MalI	GATC	6 cut(s)	585, 879, 1086, 1346, 1351, 1506
MboI	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
MfeI	CAATTG	2 cut(s)	1029, 1353
MflI	RGATCY	1 cut(s)	583
MhlI	GDGCHC	2 cut(s)	329, 533
Mly113I	GGCGCC	1 cut(s)	1338
MlyI	GAGTC	2 cut(s)	126, 784
MmeI	TCCRAC	1 cut(s)	432
MroI	TCCGGA	1 cut(s)	586
MroNI	GCCGGC	1 cut(s)	74
MseI	TTAA	1 cut(s)	564
MslI	CAYNNNNRTG	2 cut(s)	548, 1188
MspA1I	CMGCKG	1 cut(s)	250
MspI	CCGG	6 cut(s)	75, 191, 581, 587, 602, 653
MspR9I	CCNGG	4 cut(s)	191, 242, 700, 1056
MunI	CAATTG	2 cut(s)	1029, 1353
MvaI	CCWGG	3 cut(s)	242, 700, 1056
MvnI	CGCG	1 cut(s)	876
MwoI	GCNNNNNNNGC	4 cut(s)	13, 653, 1273, 1488
NaeI	GCCGGC	1 cut(s)	76
NarI	GGCGCC	1 cut(s)	1338
NciI	CCSGG	1 cut(s)	191
NcoI	CCATGG	2 cut(s)	868, 1128
NdeII	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
NgoMIV	GCCGGC	1 cut(s)	74
NlaIV	GGNNCC	6 cut(s)	50, 235, 272, 398, 585, 1339
NmeAIII	GCCGAG	4 cut(s)	117, 210, 384, 416
NmuCI	GTSAC	2 cut(s)	538, 1492
NspI	RCATGY	1 cut(s)	1013
PagI	TCATGA	1 cut(s)	126
PaqCI	CACCTGC	1 cut(s)	374
PciSI	GCTCTTC	1 cut(s)	260
PdiI	GCCGGC	1 cut(s)	76
PfeI	GAWTC	1 cut(s)	520
PflFI	GACNNNGTC	1 cut(s)	275
PleI	GAGTC	2 cut(s)	126, 783
PluTI	GGCGCC	1 cut(s)	1341
PmaCI	CACGTG	1 cut(s)	476
PmlI	CACGTG	1 cut(s)	476
PpsI	GAGTC	2 cut(s)	126, 783
Ppu21I	YACGTR	1 cut(s)	476
PpuMI	RGGWCCY	1 cut(s)	271
Psp124BI	GAGCTC	2 cut(s)	329, 533
Psp5II	RGGWCCY	1 cut(s)	271
Psp6I	CCWGG	3 cut(s)	240, 698, 1054
PspCI	CACGTG	1 cut(s)	476
PspFI	CCCAGC	1 cut(s)	1282
PspGI	CCWGG	3 cut(s)	240, 698, 1054
PspN4I	GGNNCC	6 cut(s)	50, 235, 272, 398, 585, 1339
PspPI	GGNCC	4 cut(s)	82, 271, 1204, 1241
PspPPI	RGGWCCY	1 cut(s)	271
PsuI	RGATCY	1 cut(s)	583
PsyI	GACNNNGTC	1 cut(s)	275
PvuII	CAGCTG	1 cut(s)	250
RsaI	GTAC	2 cut(s)	50, 668
RsaNI	GTAC	2 cut(s)	49, 667
RseI	CAYNNNNRTG	2 cut(s)	548, 1188
SacI	GAGCTC	2 cut(s)	329, 533
SapI	GCTCTTC	1 cut(s)	260
SaqAI	TTAA	1 cut(s)	564
Sau3AI	GATC	6 cut(s)	583, 877, 1084, 1344, 1349, 1504
Sau96I	GGNCC	4 cut(s)	82, 271, 1204, 1241
SchI	GAGTC	2 cut(s)	126, 784
ScrFI	CCNGG	4 cut(s)	191, 242, 700, 1056
SduI	GDGCHC	2 cut(s)	329, 533
SfaNI	GCATC	6 cut(s)	423, 675, 836, 991, 1331, 1456
SfcI	CTRYAG	2 cut(s)	534, 925
SfoI	GGCGCC	1 cut(s)	1339
SinI	GGWCC	3 cut(s)	271, 1204, 1241
SmiMI	CAYNNNNRTG	2 cut(s)	548, 1188
SmlI	CTYRAG	1 cut(s)	772
SmoI	CTYRAG	1 cut(s)	772
SsiI	CCGC	7 cut(s)	21, 142, 339, 420, 491, 676, 874
SspDI	GGCGCC	1 cut(s)	1337
SspMI	CTAG	3 cut(s)	197, 275, 374
SstI	GAGCTC	2 cut(s)	329, 533
StyD4I	CCNGG	4 cut(s)	189, 240, 698, 1054
StyI	CCWWGG	4 cut(s)	741, 849, 868, 1128
TaaI	ACNGT	4 cut(s)	238, 1039, 1072, 1461
TaiI	ACGT	6 cut(s)	163, 292, 478, 668, 865, 1517
TaqI	TCGA	5 cut(s)	969, 1087, 1148, 1456, 1509
TauI	GCSGC	4 cut(s)	144, 342, 494, 876
TfiI	GAWTC	1 cut(s)	520
Tru1I	TTAA	1 cut(s)	564
Tru9I	TTAA	1 cut(s)	564
TscAI	CASTG	3 cut(s)	717, 1075, 1178
TseFI	GTSAC	2 cut(s)	538, 1492
TseI	GCWGC	7 cut(s)	247, 250, 656, 737, 893, 930, 1370
Tsp45I	GTSAC	2 cut(s)	538, 1492
TspDTI	ATGAA	4 cut(s)	475, 1069, 1189, 1206
TspRI	CASTG	3 cut(s)	717, 1075, 1178
Tth111I	GACNNNGTC	1 cut(s)	275
VpaK11BI	GGWCC	3 cut(s)	271, 1204, 1241
XapI	RAATTY	3 cut(s)	854, 1104, 1234
XceI	RCATGY	1 cut(s)	1013
XmiI	GTMKAC	3 cut(s)	294, 704, 1074
XspI	CTAG	3 cut(s)	197, 275, 374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.