Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0004928

Physical Location & Seq

Genomic Coordinates Forward (+)

15016947 .. 15020879

Gene Structure 3933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3735 bp

ATGCCAAAGCACCACGTGAGGGAGTCAATTAAGTCCTTATTTGGAAGTCATATCAATTCACAGAAGCATGAAGAGCTGAAAGGAACTAAAATAGGTATTGAGGAGAAGGTGAATAAAATATTGAAGCTTCTAAAAAATGAAGAGCTTGAAAAAGTTGACATCCCAATAGAGAACTCCAAAGCGGAACCTCTCGCTGAGCTAATTCAGGATTTCCACAAGGATTACCAATCACTGTATGCACAATATGATCAACTAACCGGAGCGCTGAAGAAAAAAGTTCGGAGCAAACAAGAAAAGGACAACAGCTCTTCATCAAGTTCAGACTCAGATTCCAATCATTCTTCAAATGAAAAAAGCAGTAAAAATGGAGTGATGGAAAGTGACTTTCAGAAAATAACTGATGGGATGAAGCAGGAACTTGAATTGGCACATCAAGAAGTTGCTGACCTGAAGAGGAGATTGACAGCTACAAGTGAAGAGAAGGAAGCTTTAAGCTCAGAATGCGCGGCGGCTTTGACCAAGATAGAAGAAAAGGAGAGTGTTGTTATTGACTTGAAGACTGCAGCTGAAAGGTTAGATGCCGAAAAATCACTACTTTTGGCCGAGAATGGTGAGCTAAAACAAAAACTGGAAGCTGGTGGAAAGATAGAAGCTGAATTGATTCAAAAAGTGGAAGATGTGGAAGGAGAGAGAGATAACTTGATTAAGGAGAAAGAGACTGCTCTGAGAACAATTGAAGATGGAGAGGCTATTACTGCGGAATTAAGAACCGTGATTGATAGGCTGAAAGATGAAAAAGTAACCCTTGAGCAAGAACTAGAATCTGTTCGAGGGGAAGTCATCCATATAAAGGAGAAGCTGCAATCTGCAGAAGAGCAGGTATCAGATTTAAGCCACAATCTGAAAGCCAAGGAGGAAGAAACCTTGAAAATTGCAGAGATCTCGAATGAGATTCAGCAGGCACAGAACGTGATACAAGAACTCACAACTGAATCTAGTCAGCTAAGGGAGAAATTGGGTCAGAGGGAAGTGGAATATTCGGCTCTGTCTGAGATGCATGAGCTGCATGAGAAGAAAACATTAGCTCAAATTATGGAATTACAGGCTGCTGTGACAGGGCTGGAACTGGAGCTGGAATCTTTGCGAGCTCAGAAAAGAGATATGGAAGTGAAGATTGAGAGCACAGAAGCTGAAGTAAAACAACTGGGAGAGGTGAGTGCAGGACTGCAAGTCCAAATTTCAGAAGTTGAGTCAATATCAAATGAGAAAGCAGCAAAACTTTCTGCTCTCACGAAAAAACTTGAAGATTACAAAAGTGAATCTATTCAGCTGAAGGAGAAATTGGGTCAGAGGGAAGTGGAATACTCAGCTCTGTCTGAGATGCATGAGCTGCATAAGAGTAAAACATTGGCTCAAATTACGGGATTAGAGGCTGCTGTCGCAGGGGTGGAACTGGAGCTGGAATCTTTGCGAGGTCAGAAAACAGATATAGAAGTTGAGATTGAGAAAAAAGAAACTCAAGTGAAACAACTAGCAGAAGTGAATGCGGGACTGCAAGCCCGAATTTCACAACTTGAATCAATATCAAATGAGAGAGAAGCCGAATTTTCTTCCCTGGCGAAGAAATTTGAGGACAGCAGTAATGAATATGGTCGGCTACAGGAGAAACTGGGTCAGAGGGAAGTGGAACACTCAACTCTGTCTGAGATGCATGAGCTGCATAAGAGTAAAACGTTGGCTCAAATTACAGGTTTAGAGGCTGCTGTGGCAGGGCTGGAACTGGAGCTGGAATCCTTGCAAGGTCAGAAGAAAGATATAGAAGTTGAGATTGAGAAGAAAGAAACTCAAGTGAAACAACTAGCCAAAGAGAATGAGGGATTGCAAGCCCAAACTTCAGAACTTGAATCAATATCAAATGAGAGAGAAGCTGAACTTTCTGCTCTCACCAAAAAACTTGAGGAGATCAATAGTGAAGCTATTCAGCTGAAGGAGCAATTGGATCAGAAGGAAAAGGAATACTCAGCTCTGTCTGAGAAGCATGAGCTGCATGAGAGTAAAACATTGGCTCAAATCCTGGGATTAGAGGCTGCTGTGGCAGGGCTGGAACTGGAGCTGGGATCTTTGCGAGGTCAGAAAGAAGATATAGATGTTGAGATTGAGAACAAAGAAACTCAAGTGAAACAACTAGCAGAAGTGAATGCGGGACTGCAAGCCCGAATTTCACAACTTGAATCAATATCAAATGAGAGAGAAGCTGAATTTTCTTCCCTGGCGAAGAAATTTGAGGACAGCAGTAATGAATATGGTCAGCTACAGGAGAAACTGGGTCAGAGGGAAGTGGAACACTCAACTCTGTCTGAGATGCATGAGCTGCATAAGAGTAAAACGTTGGCTCAAGTTACAGGTTTAGAGGCTGCTGTGGCAGGGCTGGAACTGGAGCTGGAATCTTTGCGAGGTCAGAAAAAAGATATAGAAGTTGAGATTGAGAAGAAAGAAACTCAAGTGAAACAACTAGCCGAAGAGAATGCGGGATTGCAAGCCCAAACTTCAGAAATTGAATCAATATCAAATGAGAGAGAAGCTGAACTTTCTGCTCTCACCAAAAAACTTGAGGAGATCAATAGTGAAGCTATTCAGCTGAAGGAGCAATTGTATCAGAAGGAAAAGGAATACTCAGCTCTGTCTGAGAAGCATGAGCTGCATGAGAGTAAAACATTGGCTCAAATTACGGGATTAGAGGCTGCTGTCGCAGGGCTGGAACTGGAGCTGGAATCTTTGCAAGGTCAGAAAACAGATATAGAAGTTGAGATTGAGAACAAAGAAACTCAAGTGAAACAACTAGCAGAAGAGAATGCAGGACTGCAAGCCCGAATTTCACAACTTGAATCAATATCAAATGAGAGAGAAGCCGAATTTTCTTCCCTGGTGAAGAAATTTGAGGACAGCGGTAATGAATATGGTCGGCTACAGGAGAAACTGAGTCAGAGGGAAGTGGAACACTCAACTCTGTCTGAGATGCATGAGCTGCATAAGAGTAAAACGTTGGCTCAAATTGCAGGTTTAGAGGCTGCTGTGGCAGGGCTGGAACTGGAGCTGGAATCCTTGCGAGGTCAGAAGAAAGATATAGAAGTTGAGATTGAGAAGAAAGAAACTCAAGTGAAACAACTAGCCGAAGAGAATTCGGGATTGCAAGCCCAAACTTCAGAACTTGAATCAATATCAAATGAGAGAGAAGCTGAACTTTCTGCTCTCACCAAAAAACTTGAGGAGATCAATAGTGAAGCTATTCAGCTGAAGGAGCAATTGTATCAGAAGGAAAAGGAATACTCAGCTCTGTCTGAGAAGCATGAGCTGCATGAGAGTAAAACATTGGCTCAAATTACGGAATTAGAGGCTGCTGTTGCAGGGCTGGAACTGGAGCTGGAATCTTTGCGAGGTCAGAAAACAGATATAGAAGTTGAGATTGAGAACAAAGAAACTCAAGTGAAACAACTAGCAGAAGAGAATGCGGGACTGCAAGCCCGAATTTCACAACTTGAATCAATATCAAATGAGAGAGAAGCCGAATTTTCTTCCCTGGTGAAGAAATTTGAGGACAGCGGTAATGAATATGGTCGGCTACAGGAGAAACTGGGTCAGAGGGAAGTGGAACACTCAACTCTGTCTGAGATGCATGAGCTGGCTGGAACTGGAGCTGGAATCCTTGCGAGGTCAGAAGAAAGATATAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009507 GO:0009536 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0016020 GO:0023051 GO:0023056 GO:0031090 GO:0032386 GO:0032870 GO:0032879 GO:0032880 GO:0033157 GO:0033993 GO:0042221 GO:0042306 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046822 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051223 GO:0051716 GO:0060341 GO:0065007 GO:0070201 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0090087 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:1900180 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903827 GO:1904589 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

1245

Amino Acids

139.58

Weight (kDa)

4.81

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIP1	PF07765	14 - 83	1.9e-12	KIP1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004928)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64330 AT5G41790 AT5G41790
fragaria_vesca	FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072 FvH4_5g04072
malus_domestica	MD06G1102300.v1.1 MD14G1121500.v1.1
prunus_persica	Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1 Prupe.5G115300_v2.0.a1
pyrus_communis	pycom06g09710
rosa_chinensis	RchiOBHm_Chr7g0195431
rosa_laevigata	RLG00000004121
rosa_multiflora	Rmu_sc0020044.1_g000001 Rmu_sc0020160.1_g000002 Rmu_sc0035983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00260490
rosa_rugosa	Rorug07G0023200
rosa_samantha	Rh7AG150700 Rh7BG152100 Rh7CG155900 Rh7DG151700
rosa_wichuraiana	Rw7G012850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	868, 3047
AccII	CGCG	1 cut(s)	506
AclI	AACGTT	3 cut(s)	1733, 2387, 3041
AclWI	GGATC	2 cut(s)	2007, 2125
AcoI	YGGCCR	1 cut(s)	600
AcvI	CACGTG	1 cut(s)	16
AdeI	CACNNNGTG	1 cut(s)	16
AfeI	AGCGCT	1 cut(s)	264
AfiI	CCNNNNNNNGG	2 cut(s)	19, 850
AhdI	GACNNNNNGTC	1 cut(s)	1229
AjnI	CCWGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
AjuI	GAANNNNNNNTTGG	4 cut(s)	1325, 1357, 1979, 2011
Alw21I	GWGCWC	2 cut(s)	1150, 1184
Alw26I	GTCTC	1 cut(s)	710
AlwI	GGATC	2 cut(s)	2007, 2125
AlwNI	CAGNNNCTG	1 cut(s)	1190
Aor51HI	AGCGCT	1 cut(s)	264
AoxI	GGCC	1 cut(s)	600
Asp700I	GAANNNNTTC	6 cut(s)	660, 825, 1323, 1977, 2631, 3285
AspLEI	GCGC	2 cut(s)	265, 506
AsuHPI	GGTGA	8 cut(s)	121, 623, 1225, 1936, 2590, 2938, 3244, 3592
BanII	GRGCYC	1 cut(s)	1150
BbrPI	CACGTG	1 cut(s)	16
BbsI	GAAGAC	1 cut(s)	563
Bbv12I	GWGCWC	2 cut(s)	1150, 1184
BccI	CCATC	3 cut(s)	367, 395, 734
BcgI	CGANNNNNNTGC	4 cut(s)	924, 958, 2507, 2541
BciT130I	CCWGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
BclI	TGATCA	1 cut(s)	247
BcoDI	GTCTC	1 cut(s)	710
BfaI	CTAG	9 cut(s)	818, 996, 1532, 1859, 2186, 2513, 2840, 3167, 3494
BfmI	CTRYAG	6 cut(s)	561, 867, 1658, 2312, 2966, 3620
BfoI	RGCGCY	1 cut(s)	266
BfuAI	ACCTGC	2 cut(s)	868, 3047
BglII	AGATCT	1 cut(s)	939
BlpI	GCTNAGC	1 cut(s)	195
Bme1390I	CCNGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
BmeRI	GACNNNNNGTC	1 cut(s)	1229
BmiI	GGNNCC	1 cut(s)	186
BmrFI	CCNGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
BmrI	ACTGGG	4 cut(s)	1214, 1679, 2333, 3641
BmsI	GCATC	7 cut(s)	568, 1044, 1371, 1698, 2352, 3006, 3660
BmuI	ACTGGG	4 cut(s)	1214, 1679, 2333, 3641
BpiI	GAAGAC	1 cut(s)	563
BpmI	CTGGAG	9 cut(s)	1148, 1475, 1802, 2129, 2456, 2783, 3110, 3437, 3711
Bpu10I	CCTNAGC	1 cut(s)	1004
Bpu1102I	GCTNAGC	1 cut(s)	195
BsaAI	YACGTR	1 cut(s)	16
BsaBI	GATNNNNATC	1 cut(s)	333
BsaJI	CCNNGG	6 cut(s)	909, 1614, 2074, 2268, 2922, 3576
BsaWI	WCCGGW	1 cut(s)	257
BsaXI	ACNNNNNCTCC	4 cut(s)	2636, 2666, 3290, 3320
Bsc4I	CCNNNNNNNGG	2 cut(s)	19, 850
Bse8I	GATNNNNATC	1 cut(s)	333
BseBI	CCWGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
BseDI	CCNNGG	6 cut(s)	909, 1614, 2074, 2268, 2922, 3576
BseGI	GGATG	3 cut(s)	159, 411, 840
BseJI	GATNNNNATC	1 cut(s)	333
BseLI	CCNNNNNNNGG	2 cut(s)	19, 850
BseRI	GAGGAG	5 cut(s)	116, 469, 1973, 2627, 3281
BseYI	CCCAGC	1 cut(s)	2113
BsgI	GTGCAG	1 cut(s)	1239
Bsh1236I	CGCG	1 cut(s)	506
BshFI	GGCC	1 cut(s)	602
BsiHKAI	GWGCWC	2 cut(s)	1150, 1184
BsiSI	CCGG	1 cut(s)	258
BslFI	GGGAC	3 cut(s)	1563, 2217, 3525
BslI	CCNNNNNNNGG	2 cut(s)	19, 850
BsmAI	GTCTC	1 cut(s)	710
BsmFI	GGGAC	3 cut(s)	1563, 2217, 3525
BsmI	GAATGC	6 cut(s)	506, 1549, 2203, 2530, 2857, 3511
BsnI	GGCC	1 cut(s)	602
Bsp1286I	GDGCHC	2 cut(s)	1150, 1184
Bsp143I	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
Bsp1720I	GCTNAGC	1 cut(s)	195
BspANI	GGCC	1 cut(s)	602
BspFNI	CGCG	1 cut(s)	506
BspLI	GGNNCC	1 cut(s)	186
BspMAI	CTGCAG	2 cut(s)	565, 871
BspMI	ACCTGC	2 cut(s)	868, 3047
BspPI	GGATC	2 cut(s)	2007, 2125
BspQI	GCTCTTC	4 cut(s)	66, 135, 313, 867
BssECI	CCNNGG	6 cut(s)	909, 1614, 2074, 2268, 2922, 3576
BssMI	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
BssT1I	CCWWGG	1 cut(s)	909
Bst2UI	CCWGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
Bst4CI	ACNGT	2 cut(s)	234, 772
BstAPI	GCANNNNNTGC	8 cut(s)	1063, 1390, 1717, 2044, 2371, 2698, 3025, 3352
BstBAI	YACGTR	1 cut(s)	16
BstF5I	GGATG	3 cut(s)	159, 411, 840
BstFNI	CGCG	1 cut(s)	506
BstH2I	RGCGCY	1 cut(s)	266
BstHHI	GCGC	2 cut(s)	265, 506
BstKTI	GATC	7 cut(s)	250, 942, 1965, 2002, 2120, 2619, 3273
BstMAI	GTCTC	1 cut(s)	710
BstMBI	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
BstNI	CCWGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
BstSCI	CCNGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
BstSFI	CTRYAG	6 cut(s)	561, 867, 1658, 2312, 2966, 3620
BstUI	CGCG	1 cut(s)	506
BstV2I	GAAGAC	1 cut(s)	563
BstX2I	RGATCY	2 cut(s)	939, 2117
BstYI	RGATCY	2 cut(s)	939, 2117
BsuRI	GGCC	1 cut(s)	602
BtsCI	GGATG	3 cut(s)	159, 411, 840
BtsIMutI	CAGTG	1 cut(s)	230
BveI	ACCTGC	2 cut(s)	868, 3047
CaiI	CAGNNNCTG	1 cut(s)	1190
CfoI	GCGC	2 cut(s)	265, 506
DpnI	GATC	7 cut(s)	249, 941, 1964, 2001, 2119, 2618, 3272
DpnII	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
DraIII	CACNNNGTG	1 cut(s)	16
DriI	GACNNNNNGTC	1 cut(s)	1229
EaeI	YGGCCR	1 cut(s)	600
Eam1105I	GACNNNNNGTC	1 cut(s)	1229
Ecl136II	GAGCTC	1 cut(s)	1148
Eco130I	CCWWGG	1 cut(s)	909
Eco24I	GRGCYC	1 cut(s)	1150
Eco47III	AGCGCT	1 cut(s)	264
Eco53kI	GAGCTC	1 cut(s)	1148
Eco72I	CACGTG	1 cut(s)	16
EcoICRI	GAGCTC	1 cut(s)	1148
EcoRI	GAATTC	1 cut(s)	3178
EcoRII	CCWGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
EcoT14I	CCWWGG	1 cut(s)	909
EcoT22I	ATGCAT	6 cut(s)	1059, 1386, 1713, 2367, 3021, 3675
EcoT38I	GRGCYC	1 cut(s)	1150
ErhI	CCWWGG	1 cut(s)	909
FalI	AAGNNNNNCTT	8 cut(s)	789, 821, 1917, 1949, 2571, 2603, 3225, 3257
FaqI	GGGAC	3 cut(s)	1563, 2217, 3525
FauI	CCCGC	4 cut(s)	1540, 2194, 2521, 3502
FbaI	TGATCA	1 cut(s)	247
FokI	GGATG	3 cut(s)	146, 418, 827
FriOI	GRGCYC	1 cut(s)	1150
FspBI	CTAG	9 cut(s)	818, 996, 1532, 1859, 2186, 2513, 2840, 3167, 3494
GlaI	GCGC	2 cut(s)	264, 505
GsaI	CCCAGC	1 cut(s)	2117
GsuI	CTGGAG	9 cut(s)	1148, 1475, 1802, 2129, 2456, 2783, 3110, 3437, 3711
HaeII	RGCGCY	1 cut(s)	266
HaeIII	GGCC	1 cut(s)	602
HapII	CCGG	1 cut(s)	258
HhaI	GCGC	2 cut(s)	265, 506
Hin6I	GCGC	2 cut(s)	263, 504
HinP1I	GCGC	2 cut(s)	263, 504
HincII	GTYRAC	1 cut(s)	157
HindII	GTYRAC	1 cut(s)	157
HindIII	AAGCTT	2 cut(s)	125, 486
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	8 cut(s)	121, 623, 1225, 1936, 2590, 2938, 3244, 3592
Hpy166II	GTNNAC	1 cut(s)	157
Hpy188III	TCNNGA	5 cut(s)	206, 434, 943, 1291, 3183
Hpy8I	GTNNAC	1 cut(s)	157
HpyCH4III	ACNGT	2 cut(s)	234, 772
HpyCH4IV	ACGT	5 cut(s)	15, 969, 1733, 2387, 3041
HpySE526I	ACGT	5 cut(s)	15, 969, 1733, 2387, 3041
HspAI	GCGC	2 cut(s)	263, 504
Ksp22I	TGATCA	1 cut(s)	247
Kzo9I	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
LguI	GCTCTTC	4 cut(s)	66, 135, 313, 867
LweI	GCATC	7 cut(s)	568, 1044, 1371, 1698, 2352, 3006, 3660
MaeI	CTAG	9 cut(s)	818, 996, 1532, 1859, 2186, 2513, 2840, 3167, 3494
MaeII	ACGT	5 cut(s)	15, 969, 1733, 2387, 3041
MaeIII	GTNAC	4 cut(s)	380, 799, 1111, 2398
MalI	GATC	7 cut(s)	249, 941, 1964, 2001, 2119, 2618, 3272
MboI	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
MfeI	CAATTG	4 cut(s)	732, 1994, 2648, 3302
MflI	RGATCY	2 cut(s)	939, 2117
MhlI	GDGCHC	2 cut(s)	1150, 1184
MlyI	GAGTC	4 cut(s)	32, 317, 1259, 2989
Mph1103I	ATGCAT	6 cut(s)	1059, 1386, 1713, 2367, 3021, 3675
MroXI	GAANNNNTTC	6 cut(s)	660, 825, 1323, 1977, 2631, 3285
MseI	TTAA	5 cut(s)	30, 491, 705, 764, 890
MspA1I	CMGCKG	7 cut(s)	566, 1330, 1984, 2638, 2946, 3292, 3600
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
MunI	CAATTG	4 cut(s)	732, 1994, 2648, 3302
Mva1269I	GAATGC	6 cut(s)	506, 1549, 2203, 2530, 2857, 3511
MvaI	CCWGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
MvnI	CGCG	1 cut(s)	506
NdeII	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
NlaIV	GGNNCC	1 cut(s)	186
NmeAIII	GCCGAG	1 cut(s)	628
NmuCI	GTSAC	2 cut(s)	380, 1111
NsiI	ATGCAT	6 cut(s)	1059, 1386, 1713, 2367, 3021, 3675
PciSI	GCTCTTC	4 cut(s)	66, 135, 313, 867
PctI	GAATGC	6 cut(s)	506, 1549, 2203, 2530, 2857, 3511
PdmI	GAANNNNTTC	6 cut(s)	660, 825, 1323, 1977, 2631, 3285
PleI	GAGTC	4 cut(s)	31, 317, 1258, 2988
PmaCI	CACGTG	1 cut(s)	16
PmlI	CACGTG	1 cut(s)	16
PpsI	GAGTC	4 cut(s)	31, 317, 1258, 2988
Ppu21I	YACGTR	1 cut(s)	16
Psp124BI	GAGCTC	1 cut(s)	1150
Psp1406I	AACGTT	3 cut(s)	1733, 2387, 3041
Psp6I	CCWGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
PspCI	CACGTG	1 cut(s)	16
PspFI	CCCAGC	1 cut(s)	2113
PspGI	CCWGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
PspN4I	GGNNCC	1 cut(s)	186
PstI	CTGCAG	2 cut(s)	565, 871
PstNI	CAGNNNCTG	1 cut(s)	1190
PsuI	RGATCY	2 cut(s)	939, 2117
PvuII	CAGCTG	5 cut(s)	566, 1330, 1984, 2638, 3292
SacI	GAGCTC	1 cut(s)	1150
SapI	GCTCTTC	4 cut(s)	66, 135, 313, 867
SaqAI	TTAA	5 cut(s)	30, 491, 705, 764, 890
Sau3AI	GATC	7 cut(s)	247, 939, 1962, 1999, 2117, 2616, 3270
SchI	GAGTC	4 cut(s)	32, 317, 1259, 2989
ScrFI	CCNGG	5 cut(s)	1616, 2075, 2270, 2924, 3578
SduI	GDGCHC	2 cut(s)	1150, 1184
SfaNI	GCATC	7 cut(s)	568, 1044, 1371, 1698, 2352, 3006, 3660
SfcI	CTRYAG	6 cut(s)	561, 867, 1658, 2312, 2966, 3620
SspI	AATATT	2 cut(s)	120, 1037
SspMI	CTAG	9 cut(s)	818, 996, 1532, 1859, 2186, 2513, 2840, 3167, 3494
SstI	GAGCTC	1 cut(s)	1150
StyD4I	CCNGG	5 cut(s)	1614, 2073, 2268, 2922, 3576
StyI	CCWWGG	1 cut(s)	909
TaaI	ACNGT	2 cut(s)	234, 772
TaiI	ACGT	5 cut(s)	18, 972, 1736, 2390, 3044
TaqI	TCGA	2 cut(s)	829, 944
TauI	GCSGC	2 cut(s)	509, 512
Tru1I	TTAA	5 cut(s)	30, 491, 705, 764, 890
Tru9I	TTAA	5 cut(s)	30, 491, 705, 764, 890
TscAI	CASTG	1 cut(s)	237
TseFI	GTSAC	2 cut(s)	380, 1111
Tsp45I	GTSAC	2 cut(s)	380, 1111
TspGWI	ACGGA	1 cut(s)	3398
TspRI	CASTG	1 cut(s)	237
XmnI	GAANNNNTTC	6 cut(s)	660, 825, 1323, 1977, 2631, 3285
XspI	CTAG	9 cut(s)	818, 996, 1532, 1859, 2186, 2513, 2840, 3167, 3494
Zsp2I	ATGCAT	6 cut(s)	1059, 1386, 1713, 2367, 3021, 3675

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.