pycom06g17060
BHLH Family

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0004351
Physical Location & Seq
Forward (+)
21121414 .. 21123732
2319 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g17060.1

Sequence Viewer

Length: 2319 bp
ATGAGTTGGGTTTTACTTCCTAAGCATGTTGCTGCCGTTGTTAAGTGTCAAAAGGATCCGTTTAAAGCGCTCGAAATGTTTAACTCGGTGAAAAAGGAAGATGGGTTTAAGCACACATTGCTAACTTACAAATGCATGGTTGAAAAACTCGGGTTTCATGGCGAGTTTGAAGCCATGGAGCGTGTGATTTCCGAGATGAGGATGAATGTTGATAATAGCTTACTAGAAGGAGTGTACATTGGAGCCATGAGGAGTTATGGAAGGAAAGGAAAGGTTGAAGAAGCTATTAATGTGTTTCAGCGGATGGAGTTTTATAATTGTGAGCCCTCAGTTCAATCTTATAACGCAATCATGAATGTGCTCGTTGAGTATGGATATTTCAATCAAGCGCATAAGGTGTATATGGGGATGAGAGATAATGGGATTGATCCGGATGTGTATACTTATACAATACGGATAAAGTCTTTCTGTAAGACTAGCAGGCCTCATGTTGCTTTGAGACTGCTTAATAACATGCCTACCCAGGGGTGTGAGTTCAATGCCGTTGCATATTGTACAGTCATAGGTGGATTTTATGAAGAGAATTACCAGATCGAGGCATATGAATTGTTTAAAGACATGCTCGGGCAAGGTGTATGTCCCAACATTACCACATTTAACAAGCTTATTCATACATTATCCAAGAAGGGTCATATCCAAGAAATTGAAAAACTTCTCAACAAGGTTCTGAAGAGGGGTGTGTCTCCGAATTTGTTTACATTAAATATTTTCATTCAAGGGCTCTGCAACAGCGGTTCACTTAATTTGGCCGTCAGAATGCTGGATGGTTTTATGATGGAAGGTTTAACTCCAGATGTTGTCACGTATAATACATTGATCTTTGGCTTGTGTAAAAACTTCAAGGTTGAGGAAGCAGAGGGCTATATGCGTAAAATGGTGAACAATGGATTTTGGCCTGATACCTTTACCTACAACAGTATTATCGATGGATATTGCAAATTGGGTATGATACAAAAAGCAGATAAGATTCTCAGTGATGCCATTTTCAAGGGATTCATACCCGATGACTTCACATATTGCTCTTTGATTAAGGGTTTATGCCAGGATGGCAAGATCGACCGTGCCCTAGCTCTATTCAATGAGGTATTAGGAAAGGGATTCAAGCCTAATATTGTTTTCTATAACACGTTGGTAAAAGGGTTGTCTCAGAATGGGCTTTTCTTGGAAGCTTTGCAACTGATGAATGAGATGTCAAGCAACGGTTGCAGTCCCGATATCTGGACTTACAACTTGGTTATAAACGGGTTGTGCAAGATGGGTTATGTATCTGATGCCAGTAAACTAATGAATGATGCTATTGCCAGAGGATGCCTTCCCGACATATTTACTTTCAATACATTAATAGATGGTTACTGTAAACAGTCGAATCTGAATAGTGCTCTTGAGGTCATTAGTGGCATGTGGAGTCATGGTGTTACCCCTGATGTGATCACGTACAATACTGTGTTAAATGGCCTTTGCAAGGCTGCCAAATACGAGGATGTGATCCGTACTTTTCAAGCAATGATGGAGAAGGGGAGTGTTCCTAACATTATTACATATAACATACTTGTAGAAAGCCTTTGCAAAGCCCGGAAAGTGACCGAGGCCTTGGACATGCTACAGGAAATAAGAAACAAGGGCTTGACTCCAGATATTGTTTGTTTTGGCACGTTGATTAATGGTTTGTGTGGCAATGGGGATTTGGATGGAGCATATGACCTATTTACAAGAATGAAACATGAATATAATGTATCTCATACAACAGCGACATACAATATCATGATCAATGCTTTCTGTGAAAAGCTTAACAGTAGTATAGCACAAAAACTATTTTGTGAGATGGGTGACAAAGGATGTGCCCCCGACTGTTTCACTTACCGTGTCATGATTGATGGTTTCTGTAAAGCAGGAAATGATGATCATGGGTACAATTTCCTCCTGGAGAAGATTGAGAAAGGGTTCATTCCATCACTGGTGACCTTCGGAAGAGTGCTAAATTGTCTTTGTGTGAAGTATAGAGTTCAGGAGGCTGTTGGTATCATCTACCTTATGGTGCAGAAGGGCATTGTGCCTGATGTTGTTAGTACAATCTTCGAGTCTGATAAGAAGGAAATAGCAGCCCCCAAGATTGTTGTAGAAGATTTGTTGAAGAAGGGTCATATAACTTATTATGCCTATGAACTTCTCTATGATGGAATTAGAGATAAAAAGGTAGTTAAGAAAACACAAAAGAGCTTCAAACGAGGTGTTTCCACGACTTCAAAACGAAGTCCTTGA

Protein Analysis

773

Amino Acids

87.0

Weight (kDa)

8.09

Isoelectric Point (pI)

24.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 83 - 120 3.8e-07 PPR repeat family
PPR_2 PF13041 109 - 158 9.6e-14 PPR repeat family
PPR_1 PF12854 140 - 172 8.2e-06 PPR repeat
PPR_3 PF13812 167 - 226 3.3e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 180 - 226 3.5e-07 PPR repeat family
PPR_3 PF13812 203 - 259 1.6e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 214 - 263 2.5e-13 PPR repeat family
PPR_1 PF12854 245 - 275 6.3e-07 PPR repeat
PPR_1 PF12854 281 - 313 3.7e-11 PPR repeat
PPR_2 PF13041 284 - 325 6.2e-12 PPR repeat family
PPR PF01535 287 - 317 3.3e-07 PPR repeat
PPR_1 PF12854 316 - 342 1.1e-07 PPR repeat
PPR_2 PF13041 319 - 368 2.1e-15 PPR repeat family
PPR PF01535 322 - 351 4.8e-06 PPR repeat
PPR_3 PF13812 342 - 399 2.1e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 350 - 381 3.1e-10 PPR repeat
PPR PF01535 357 - 387 2e-06 PPR repeat
PPR_long PF17177 369 - 503 5.8e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 378 - 434 8.6e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 385 - 418 5.2e-08 PPR repeat
PPR_2 PF13041 389 - 438 2.7e-17 PPR repeat family
PPR PF01535 392 - 422 7.5e-07 PPR repeat
PPR_1 PF12854 420 - 450 2.2e-10 PPR repeat
PPR_2 PF13041 428 - 473 1.7e-14 PPR repeat family
PPR_3 PF13812 448 - 504 4.1e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 455 - 487 3.1e-11 PPR repeat
PPR_2 PF13041 459 - 508 7.4e-17 PPR repeat family
TPR_24 PF23276 463 - 551 2.4e-07 Fungal tetratrico peptide repeats
PPR_long PF17177 472 - 608 3.1e-08 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 489 - 539 2.1e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 491 - 514 4e-07 PPR repeat
PPR_2 PF13041 494 - 543 2.2e-15 PPR repeat family
PPR_1 PF12854 525 - 557 4.4e-09 PPR repeat
PPR_2 PF13041 529 - 577 1.3e-13 PPR repeat family
PPR_3 PF13812 553 - 612 2e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 560 - 593 8.1e-11 PPR repeat
PPR_2 PF13041 564 - 613 3.4e-13 PPR repeat family
PPR_2 PF13041 601 - 649 3.9e-16 PPR repeat family
PPR_1 PF12854 631 - 652 2.7e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 315, 342, 1298
AccI GTMKAC 1 cut(s) 440
AccIII TCCGGA 1 cut(s) 430
AciI CCGC 2 cut(s) 301, 792
AclWI GGATC 4 cut(s) 50, 63, 422, 1540
AcoI YGGCCR 1 cut(s) 807
AcsI RAATTY 1 cut(s) 748
AcuI CTGAAG 1 cut(s) 749
AfaI GTAC 6 cut(s) 236, 556, 1496, 1552, 1970, 2128
AfeI AGCGCT 1 cut(s) 69
AfiI CCNNNNNNNGG 5 cut(s) 198, 524, 595, 1278, 1522
AflIII ACRYGT 1 cut(s) 1185
AjnI CCWGG 3 cut(s) 522, 1101, 1980
AluBI AGCT 7 cut(s) 219, 284, 664, 1130, 1229, 1846, 2277
AluI AGCT 7 cut(s) 219, 284, 664, 1130, 1229, 1846, 2277
Alw21I GWGCWC 2 cut(s) 363, 1441
Alw26I GTCTC 3 cut(s) 493, 747, 1209
AlwI GGATC 4 cut(s) 50, 63, 422, 1540
Ama87I CYCGRG 2 cut(s) 149, 623
Aor13HI TCCGGA 1 cut(s) 430
Aor51HI AGCGCT 1 cut(s) 69
AoxI GGCC 5 cut(s) 482, 807, 953, 1513, 1647
ApeKI GCWGC 3 cut(s) 32, 1526, 2159
ApoI RAATTY 1 cut(s) 748
AseI ATTAAT 3 cut(s) 288, 1400, 1719
Asp700I GAANNNNTTC 2 cut(s) 711, 2000
AspLEI GCGC 2 cut(s) 70, 391
AsuC2I CCSGG 1 cut(s) 1633
AsuHPI GGTGA 4 cut(s) 100, 949, 1898, 2029
AvaI CYCGRG 2 cut(s) 149, 623
BaeGI GKGCMC 2 cut(s) 1126, 1903
BamHI GGATCC 1 cut(s) 55
BanII GRGCYC 2 cut(s) 327, 783
Bbv12I GWGCWC 2 cut(s) 363, 1441
BbvI GCAGC 3 cut(s) 19, 1513, 2171
BceAI ACGGC 3 cut(s) 20, 527, 794
BciT130I CCWGG 3 cut(s) 524, 1103, 1982
BclI TGATCA 3 cut(s) 1488, 1824, 1960
BcnI CCSGG 1 cut(s) 1633
BcoDI GTCTC 3 cut(s) 493, 747, 1209
BfaI CTAG 3 cut(s) 224, 477, 1127
BfmI CTRYAG 1 cut(s) 1661
BfoI RGCGCY 1 cut(s) 71
BglI GCCNNNNNGGC 1 cut(s) 1107
BisI GCNGC 3 cut(s) 33, 1527, 2160
BlsI GCNGC 3 cut(s) 34, 1528, 2161
Bme1390I CCNGG 4 cut(s) 524, 1103, 1633, 1982
BmeT110I CYCGRG 2 cut(s) 149, 623
BmiI GGNNCC 2 cut(s) 57, 244
BmrFI CCNGG 4 cut(s) 524, 1103, 1633, 1982
BmsI GCATC 4 cut(s) 1027, 1321, 1342, 1358
BpmI CTGGAG 3 cut(s) 834, 1674, 2003
Bpu10I CCTNAGC 1 cut(s) 21
BpuEI CTTGAG 1 cut(s) 1463
BpuMI CCSGG 1 cut(s) 1633
Bsa29I ATCGAT 1 cut(s) 984
BsaAI YACGTR 2 cut(s) 864, 1494
BsaJI CCNNGG 5 cut(s) 174, 522, 523, 1644, 1650
BsaWI WCCGGW 1 cut(s) 430
BsaXI ACNNNNNCTCC 2 cut(s) 1456, 1486
Bsc4I CCNNNNNNNGG 5 cut(s) 198, 524, 595, 1278, 1522
Bse1I ACTGG 2 cut(s) 1335, 2019
Bse3DI GCAATG 3 cut(s) 116, 1569, 1741
BseAI TCCGGA 1 cut(s) 430
BseBI CCWGG 3 cut(s) 524, 1103, 1982
BseCI ATCGAT 1 cut(s) 984
BseDI CCNNGG 5 cut(s) 174, 522, 523, 1644, 1650
BseLI CCNNNNNNNGG 5 cut(s) 198, 524, 595, 1278, 1522
BseMI GCAATG 3 cut(s) 116, 1569, 1741
BseMII CTCAG 3 cut(s) 342, 1045, 1220
BseNI ACTGG 2 cut(s) 1335, 2019
BseRI GAGGAG 1 cut(s) 265
BseSI GKGCMC 2 cut(s) 1126, 1903
BseXI GCAGC 3 cut(s) 19, 1513, 2171
BsgI GTGCAG 1 cut(s) 2117
Bsh1285I CGRYCG 1 cut(s) 1120
BshFI GGCC 5 cut(s) 484, 809, 955, 1515, 1649
BshVI ATCGAT 1 cut(s) 984
BsiEI CGRYCG 1 cut(s) 1120
BsiHKAI GWGCWC 2 cut(s) 363, 1441
BsiHKCI CYCGRG 2 cut(s) 149, 623
BsiSI CCGG 2 cut(s) 431, 1633
BslFI GGGAC 2 cut(s) 624, 1254
BslI CCNNNNNNNGG 5 cut(s) 198, 524, 595, 1278, 1522
BsmAI GTCTC 3 cut(s) 493, 747, 1209
BsmFI GGGAC 2 cut(s) 624, 1254
BsmI GAATGC 1 cut(s) 822
BsnI GGCC 5 cut(s) 484, 809, 955, 1515, 1649
BsoBI CYCGRG 2 cut(s) 149, 623
Bsp1286I GDGCHC 6 cut(s) 327, 363, 783, 1126, 1441, 1903
Bsp13I TCCGGA 1 cut(s) 430
Bsp1407I TGTACA 2 cut(s) 234, 554
Bsp143I GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
Bsp19I CCATGG 1 cut(s) 174
BspACI CCGC 2 cut(s) 301, 792
BspANI GGCC 5 cut(s) 484, 809, 955, 1515, 1649
BspCNI CTCAG 3 cut(s) 341, 1044, 1219
BspDI ATCGAT 1 cut(s) 984
BspEI TCCGGA 1 cut(s) 430
BspHI TCATGA 3 cut(s) 351, 1821, 1926
BspLI GGNNCC 2 cut(s) 57, 244
BspPI GGATC 4 cut(s) 50, 63, 422, 1540
BsrDI GCAATG 3 cut(s) 116, 1569, 1741
BsrGI TGTACA 2 cut(s) 234, 554
BsrI ACTGG 2 cut(s) 1335, 2019
BssECI CCNNGG 5 cut(s) 174, 522, 523, 1644, 1650
BssMI GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
BssNAI GTATAC 1 cut(s) 441
BssT1I CCWWGG 2 cut(s) 174, 1650
Bst1107I GTATAC 1 cut(s) 441
Bst2UI CCWGG 3 cut(s) 524, 1103, 1982
Bst6I CTCTTC 3 cut(s) 573, 725, 2023
BstAPI GCANNNNNTGC 2 cut(s) 118, 1263
BstAUI TGTACA 2 cut(s) 234, 554
BstBAI YACGTR 2 cut(s) 864, 1494
BstC8I GCNNGC 1 cut(s) 482
BstDEI CTNAG 4 cut(s) 21, 328, 1031, 1206
BstDSI CCRYGG 1 cut(s) 174
BstEII GGTNACC 1 cut(s) 2017
BstENI CCTNNNNNAGG 1 cut(s) 1520
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 2 cut(s) 70, 391
BstKTI GATC 9 cut(s) 58, 430, 594, 879, 1116, 1491, 1548, 1827, 1963
BstMAI GTCTC 3 cut(s) 493, 747, 1209
BstMBI GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
BstMCI CGRYCG 1 cut(s) 1120
BstMWI GCNNNNNNNGC 3 cut(s) 118, 1107, 1263
BstNI CCWGG 3 cut(s) 524, 1103, 1982
BstNSI RCATGY 5 cut(s) 29, 517, 622, 1462, 1660
BstPI GGTNACC 1 cut(s) 2017
BstSCI CCNGG 4 cut(s) 522, 1101, 1631, 1980
BstSFI CTRYAG 1 cut(s) 1661
BstSLI GKGCMC 2 cut(s) 1126, 1903
BstV1I GCAGC 3 cut(s) 19, 1513, 2171
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
BstZ17I GTATAC 1 cut(s) 441
Bsu15I ATCGAT 1 cut(s) 984
BsuRI GGCC 5 cut(s) 484, 809, 955, 1515, 1649
BsuTUI ATCGAT 1 cut(s) 984
BtgI CCRYGG 1 cut(s) 174
BtsIMutI CAGTG 2 cut(s) 1039, 2012
Cac8I GCNNGC 1 cut(s) 482
CciI TCATGA 3 cut(s) 351, 1821, 1926
CfoI GCGC 2 cut(s) 70, 391
ClaI ATCGAT 1 cut(s) 984
Csp6I GTAC 6 cut(s) 235, 555, 1495, 1551, 1969, 2127
CviQI GTAC 6 cut(s) 235, 555, 1495, 1551, 1969, 2127
DdeI CTNAG 4 cut(s) 21, 328, 1031, 1206
DpnI GATC 9 cut(s) 57, 429, 593, 878, 1115, 1490, 1547, 1826, 1962
DpnII GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
DraI TTTAAA 2 cut(s) 64, 613
EaeI YGGCCR 1 cut(s) 807
Eam1104I CTCTTC 3 cut(s) 573, 725, 2023
EarI CTCTTC 3 cut(s) 573, 725, 2023
Eco130I CCWWGG 2 cut(s) 174, 1650
Eco147I AGGCCT 2 cut(s) 484, 1649
Eco24I GRGCYC 2 cut(s) 327, 783
Eco32I GATATC 1 cut(s) 1276
Eco47III AGCGCT 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 749
Eco88I CYCGRG 2 cut(s) 149, 623
Eco91I GGTNACC 1 cut(s) 2017
EcoNI CCTNNNNNAGG 1 cut(s) 1520
EcoO65I GGTNACC 1 cut(s) 2017
EcoRII CCWGG 3 cut(s) 522, 1101, 1980
EcoRV GATATC 1 cut(s) 1276
EcoT14I CCWWGG 2 cut(s) 174, 1650
EcoT22I ATGCAT 1 cut(s) 137
EcoT38I GRGCYC 2 cut(s) 327, 783
ErhI CCWWGG 2 cut(s) 174, 1650
FaqI GGGAC 2 cut(s) 624, 1254
FauNDI CATATG 2 cut(s) 601, 1756
FbaI TGATCA 3 cut(s) 1488, 1824, 1960
FblI GTMKAC 1 cut(s) 440
Fnu4HI GCNGC 3 cut(s) 33, 1527, 2160
FriOI GRGCYC 2 cut(s) 327, 783
Fsp4HI GCNGC 3 cut(s) 33, 1527, 2160
FspBI CTAG 3 cut(s) 224, 477, 1127
GlaI GCGC 2 cut(s) 69, 390
GluI GCNGC 3 cut(s) 33, 1527, 2160
GsuI CTGGAG 3 cut(s) 834, 1674, 2003
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 5 cut(s) 484, 809, 955, 1515, 1649
HapII CCGG 2 cut(s) 431, 1633
HhaI GCGC 2 cut(s) 70, 391
Hin6I GCGC 2 cut(s) 68, 389
HinP1I GCGC 2 cut(s) 68, 389
HindIII AAGCTT 3 cut(s) 662, 1227, 1844
HinfI GANTC 7 cut(s) 1027, 1053, 1158, 1426, 1465, 1687, 2138
HpaII CCGG 2 cut(s) 431, 1633
HphI GGTGA 4 cut(s) 100, 949, 1898, 2029
Hpy166II GTNNAC 7 cut(s) 235, 441, 756, 797, 940, 1340, 1418
Hpy188I TCNGA 9 cut(s) 193, 729, 747, 815, 1209, 1330, 1431, 2027, 2143
Hpy8I GTNNAC 7 cut(s) 235, 441, 756, 797, 940, 1340, 1418
HpyCH4IV ACGT 4 cut(s) 863, 1187, 1493, 1712
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 1107, 1263
HpyF3I CTNAG 4 cut(s) 21, 328, 1031, 1206
HpySE526I ACGT 4 cut(s) 863, 1187, 1493, 1712
HspAI GCGC 2 cut(s) 68, 389
Kpn2I TCCGGA 1 cut(s) 430
Ksp22I TGATCA 3 cut(s) 1488, 1824, 1960
Kzo9I GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
LmnI GCTCC 3 cut(s) 178, 242, 1751
Lsp1109I GCAGC 3 cut(s) 19, 1513, 2171
LweI GCATC 4 cut(s) 1027, 1321, 1342, 1358
MaeI CTAG 3 cut(s) 224, 477, 1127
MaeII ACGT 4 cut(s) 863, 1187, 1493, 1712
MaeIII GTNAC 6 cut(s) 859, 1409, 1474, 1639, 1886, 2017
MalI GATC 9 cut(s) 57, 429, 593, 878, 1115, 1490, 1547, 1826, 1962
MboI GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
MboII GAAGA 9 cut(s) 110, 290, 590, 742, 1999, 2040, 2125, 2192, 2203
MflI RGATCY 1 cut(s) 55
MhlI GDGCHC 6 cut(s) 327, 363, 783, 1126, 1441, 1903
MlyI GAGTC 3 cut(s) 1474, 1681, 2147
Mph1103I ATGCAT 1 cut(s) 137
MroI TCCGGA 1 cut(s) 430
MroXI GAANNNNTTC 2 cut(s) 711, 2000
MslI CAYNNNNRTG 1 cut(s) 356
MspA1I CMGCKG 2 cut(s) 301, 792
MspI CCGG 2 cut(s) 431, 1633
MspR9I CCNGG 4 cut(s) 524, 1103, 1633, 1982
Mva1269I GAATGC 1 cut(s) 822
MvaI CCWGG 3 cut(s) 524, 1103, 1982
MwoI GCNNNNNNNGC 3 cut(s) 118, 1107, 1263
NciI CCSGG 1 cut(s) 1633
NcoI CCATGG 1 cut(s) 174
NdeI CATATG 2 cut(s) 601, 1756
NdeII GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
NlaIV GGNNCC 2 cut(s) 57, 244
NmuCI GTSAC 4 cut(s) 859, 1639, 1886, 2017
NsiI ATGCAT 1 cut(s) 137
NspI RCATGY 5 cut(s) 29, 517, 622, 1462, 1660
PagI TCATGA 3 cut(s) 351, 1821, 1926
PasI CCCWGGG 1 cut(s) 523
PceI AGGCCT 2 cut(s) 484, 1649
PctI GAATGC 1 cut(s) 822
PdmI GAANNNNTTC 2 cut(s) 711, 2000
PfeI GAWTC 4 cut(s) 1027, 1053, 1158, 1426
PfoI TCCNGGA 1 cut(s) 1980
PkrI GCNGC 3 cut(s) 34, 1528, 2161
PleI GAGTC 3 cut(s) 1473, 1681, 2146
PpsI GAGTC 3 cut(s) 1473, 1681, 2146
Ppu21I YACGTR 2 cut(s) 864, 1494
PshBI ATTAAT 3 cut(s) 288, 1400, 1719
PsiI TTATAA 3 cut(s) 315, 342, 1298
Psp6I CCWGG 3 cut(s) 522, 1101, 1980
PspEI GGTNACC 1 cut(s) 2017
PspGI CCWGG 3 cut(s) 522, 1101, 1980
PspN4I GGNNCC 2 cut(s) 57, 244
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 6 cut(s) 236, 556, 1496, 1552, 1970, 2128
RsaNI GTAC 6 cut(s) 235, 555, 1495, 1551, 1969, 2127
RseI CAYNNNNRTG 1 cut(s) 356
SatI GCNGC 3 cut(s) 33, 1527, 2160
Sau3AI GATC 9 cut(s) 55, 427, 591, 876, 1113, 1488, 1545, 1824, 1960
SchI GAGTC 3 cut(s) 1474, 1681, 2147
ScrFI CCNGG 4 cut(s) 524, 1103, 1633, 1982
SduI GDGCHC 6 cut(s) 327, 363, 783, 1126, 1441, 1903
SfaNI GCATC 4 cut(s) 1027, 1321, 1342, 1358
SfcI CTRYAG 1 cut(s) 1661
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 1 cut(s) 1442
SmoI CTYRAG 1 cut(s) 1442
SseBI AGGCCT 2 cut(s) 484, 1649
SsiI CCGC 2 cut(s) 301, 792
SspI AATATT 2 cut(s) 766, 1171
SspMI CTAG 3 cut(s) 224, 477, 1127
StuI AGGCCT 2 cut(s) 484, 1649
StyD4I CCNGG 4 cut(s) 522, 1101, 1631, 1980
StyI CCWWGG 2 cut(s) 174, 1650
TaiI ACGT 4 cut(s) 866, 1190, 1496, 1715
TaqI TCGA 6 cut(s) 72, 594, 984, 1116, 1424, 2136
TaqII GACCGA 1 cut(s) 1658
TatI WGTACW 3 cut(s) 234, 554, 2126
TfiI GAWTC 4 cut(s) 1027, 1053, 1158, 1426
TscAI CASTG 2 cut(s) 1039, 2019
TseFI GTSAC 4 cut(s) 859, 1639, 1886, 2017
TseI GCWGC 3 cut(s) 32, 1526, 2159
Tsp45I GTSAC 4 cut(s) 859, 1639, 1886, 2017
TspGWI ACGGA 3 cut(s) 48, 469, 1538
TspRI CASTG 2 cut(s) 1039, 2019
VspI ATTAAT 3 cut(s) 288, 1400, 1719
XagI CCTNNNNNAGG 1 cut(s) 1520
XapI RAATTY 1 cut(s) 748
XceI RCATGY 5 cut(s) 29, 517, 622, 1462, 1660
XmiI GTMKAC 1 cut(s) 440
XmnI GAANNNNTTC 2 cut(s) 711, 2000
XspI CTAG 3 cut(s) 224, 477, 1127
Zsp2I ATGCAT 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.