Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004351

Physical Location & Seq

Genomic Coordinates Reverse (-)

57253738 .. 57257278

Gene Structure 3541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0438800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGACTCTTTTGAAGTTTGTGGATGGTGCCAGTCAACAGAGCATTGGAGCATTCAGCTGGTTTGCCACTCACGGAACCTCCATGAGCAAAGAGAATAAGCTCATCAGTGGAGACAACAAAGGTGCAGCTGCACGGTTCTTCGAGGACCAGTTTGCTACAACTCCCATCAGAGCACCCTTCAACTCCTCTAGCAAACCAGATATTGGTGAGTTAGTAAAGAAGGCGCAGACAATCAAAGCAACAGGAGGGCAGCGCTGCAGTAAAACGAGCAGCCAAGACTGCAAGGTGAGGAAGAACGACGGGTCACTATTCGTGGGAGCTTTTTGCCAATCTAATGTTGGAGATGTGACCCCGAATGTGCTCGGAGCATTCTGCACTGATACCGGAAGACCTTGTGACTTCAATACATCCTCATGTAATGGGAACGACCTGCTTTGCCTCGGCCAGGGACCTGGGTATCCTGATGAAATACTAAGCACCAAAATTATAGGGGAAAGACAGTTTAAGAAGGCAGCTGATCTATTTACATCGGCTTCAGAGAAATTAACCGGGGCTATTGATTACCGTCACGTGTACCTAGACTTTACGGATATTGAGGTTGAGCTAGAAGGAAACAAGAAGGTGAAAACATGTCCAGCAGCAGTTGGTGCTGGTTTTGCTGCTGGGACTACAGATGGACCTGGTGTCTCTGGGTTTCAACAAGGTGATACAGAGATCCCTGAAAAATATAGAAAACTTAGGGACGCACTGCAAAAACCTAGCGAATATCAAGTGGACTGCCAAGAACCCAAGAATGTTCTGCTTTCCACCGGTGAAATGTTTAAACCTTACGCATGGGCGCCTGCAATTGTCCCTATACAAATGCTCAGATTGGGAAAACTCATCATACTTTCTGTCCCAGGAGAATTCACCACAATGGCGGGGAGGCGGCTAAGGGACGCAGTAAAGGAGACATTGATAAGTAACAGCAAGGGTGAATTTGATGAAAACACCCACATAGTAATAGCAGGCCTTACAAATACTTATTCCCAATATATAGCAACTTTCGAAGAGTACACACAACAGAGATATGAGGCTGCTTCCACTCTCTATGGTCCTCACACATTATCAGCATACATCCAAGAATTTGAGAAATTAGCCAAAGCAATGGCCAAGGGAGAAAAGGTCATTTCTAAAGGTCCCTCGCCACCAGATCTTTCCTCTGTACAAGTCGAAGTCTTACTTGGACCTTTTGGAGATTCGCCTCCACCACATACAAAGTTTGGAGATATGAAACAAGATATCATTATACCAAAAAGTGGATCATTCAGAAAGGGAGATTTGAATAGACCAAATGCCACATTTTGGAGTGCAAACCCAAACTATGACTTGTTGACAGAAGGCACATATGCTGTGGTAGAGATGCTTCAAGGGGATAACTGGGTTCCAGTTTACGATGATGATGATTTCTCCGTGGTTTTCAAGTGGAATAGAGATGACAAGGGATTATATAGTGCAGCAACCATAGAATGGGAAATACCAATTTATGCAAATTTGGGGGTGTACAGGCTCAGGCATTTTGGTTCATCAAGGAAAAAGAAGGACTCCCCCATCACTTACTTCACTGGTGCATCTAGTGGGTTTGCAGTGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 bHLH-MYC_N

Protein Analysis

544

Amino Acids

59.51

Weight (kDa)

6.0

Isoelectric Point (pI)

30.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ceramidase_alk	PF04734	1 - 374	8e-130	Neutral/alkaline non-lysosomal ceramidase, N-terminal
Ceramidse_alk_C	PF17048	376 - 543	2.8e-42	Neutral/alkaline non-lysosomal ceramidase, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004351)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74580 AT1G74580 AT1G74580
fragaria_vesca	FvH4_5g15040
malus_domestica	MD06G1192500.v1.1
prunus_persica	Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1 Prupe.5G192300_v2.0.a1
pyrus_communis	pycom06g17060
rosa_chinensis	RchiOBHm_Chr7g0181161
rosa_laevigata	RLG00000005208
rosa_multiflora	Rmu_sc0001147.1_g000017 Rmu_sc0027076.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272220
rosa_rugosa	Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0438700 Rorug06G0438800 Rorug06G0438800 Rorug06G0438900 Rorug06G0439000 Rorug06G0439100 Rorug06G0439200 Rorug06G0439300 Rorug06G0439400
rosa_samantha	Rh7AG040900 Rh7BG040300 Rh7CG042300 Rh7DG040700
rosa_wichuraiana	Rw7G003380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	438
AccB1I	GGYRCC	2 cut(s)	26, 838
AccB7I	CCANNNNNTGG	4 cut(s)	203, 1298, 1344, 1509
AciI	CCGC	2 cut(s)	920, 928
AclWI	GGATC	2 cut(s)	709, 1309
AcoI	YGGCCR	2 cut(s)	442, 1149
AcsI	RAATTY	4 cut(s)	905, 977, 1124, 1531
AcuI	CTGAAG	1 cut(s)	519
AcvI	CACGTG	1 cut(s)	571
AcyI	GRCGYC	1 cut(s)	839
AfaI	GTAC	4 cut(s)	575, 1055, 1206, 1544
AfeI	AGCGCT	1 cut(s)	254
AfiI	CCNNNNNNNGG	5 cut(s)	203, 445, 1298, 1344, 1509
AflIII	ACRYGT	2 cut(s)	570, 629
AgeI	ACCGGT	1 cut(s)	809
AgsI	TTSAA	7 cut(s)	13, 181, 403, 698, 1324, 1409, 1462
AhdI	GACNNNNNGTC	1 cut(s)	683
AjnI	CCWGG	4 cut(s)	444, 451, 679, 898
AjuI	GAANNNNNNNTTGG	2 cut(s)	1206, 1238
AluBI	AGCT	6 cut(s)	57, 100, 128, 320, 515, 604
AluI	AGCT	6 cut(s)	57, 100, 128, 320, 515, 604
Alw21I	GWGCWC	2 cut(s)	175, 363
Alw26I	GTCTC	3 cut(s)	105, 691, 944
AlwI	GGATC	2 cut(s)	709, 1309
Aor51HI	AGCGCT	1 cut(s)	254
AoxI	GGCC	3 cut(s)	442, 1009, 1149
ApoI	RAATTY	4 cut(s)	905, 977, 1124, 1531
AsiGI	ACCGGT	1 cut(s)	809
AspLEI	GCGC	3 cut(s)	226, 255, 841
AspS9I	GGNCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
AsuC2I	CCSGG	1 cut(s)	550
AsuHPI	GGTGA	7 cut(s)	218, 298, 634, 716, 824, 901, 986
AsuII	TTCGAA	1 cut(s)	1047
AvaII	GGWCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
BaeI	ACNNNNGTAYC	2 cut(s)	440, 473
BalI	TGGCCA	1 cut(s)	1151
BanI	GGYRCC	2 cut(s)	26, 838
BarI	GAAGNNNNNNTAC	2 cut(s)	1389, 1421
BbrPI	CACGTG	1 cut(s)	571
BbsI	GAAGAC	1 cut(s)	394
Bbv12I	GWGCWC	2 cut(s)	175, 363
BccI	CCATC	4 cut(s)	17, 173, 668, 1598
BciT130I	CCWGG	4 cut(s)	446, 453, 681, 900
BciVI	GTATCC	1 cut(s)	468
BcnI	CCSGG	1 cut(s)	550
BcoDI	GTCTC	3 cut(s)	105, 691, 944
BfaI	CTAG	5 cut(s)	189, 578, 605, 759, 1614
BfmI	CTRYAG	2 cut(s)	256, 669
BfoI	RGCGCY	2 cut(s)	256, 842
BfuAI	ACCTGC	1 cut(s)	438
BfuI	GTATCC	1 cut(s)	468
BglII	AGATCT	1 cut(s)	1192
Bme1390I	CCNGG	5 cut(s)	446, 453, 550, 681, 900
Bme18I	GGWCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
BmeRI	GACNNNNNGTC	1 cut(s)	683
BmgT120I	GGNCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
BmiI	GGNNCC	6 cut(s)	28, 76, 450, 840, 1180, 1425
BmrFI	CCNGG	5 cut(s)	446, 453, 550, 681, 900
BmrI	ACTGGG	1 cut(s)	1429
BmsI	GCATC	2 cut(s)	1392, 1619
BmuI	ACTGGG	1 cut(s)	1429
BpiI	GAAGAC	1 cut(s)	394
Bpu10I	CCTNAGC	2 cut(s)	932, 1550
Bpu14I	TTCGAA	1 cut(s)	1047
BpuMI	CCSGG	1 cut(s)	550
BsaAI	YACGTR	1 cut(s)	571
BsaHI	GRCGYC	1 cut(s)	839
BsaJI	CCNNGG	7 cut(s)	439, 445, 452, 549, 898, 1152, 1452
BsaWI	WCCGGW	2 cut(s)	383, 809
BsaXI	ACNNNNNCTCC	4 cut(s)	62, 92, 1149, 1179
Bsc4I	CCNNNNNNNGG	5 cut(s)	203, 445, 1298, 1344, 1509
Bse118I	RCCGGY	1 cut(s)	809
Bse1I	ACTGG	5 cut(s)	30, 148, 1424, 1427, 1609
Bse3DI	GCAATG	1 cut(s)	1152
BseBI	CCWGG	4 cut(s)	446, 453, 681, 900
BseDI	CCNNGG	7 cut(s)	439, 445, 452, 549, 898, 1152, 1452
BseGI	GGATG	3 cut(s)	28, 407, 1116
BseLI	CCNNNNNNNGG	5 cut(s)	203, 445, 1298, 1344, 1509
BseMI	GCAATG	1 cut(s)	1152
BseMII	CTCAG	2 cut(s)	880, 1564
BseNI	ACTGG	5 cut(s)	30, 148, 1424, 1427, 1609
BseRI	GAGGAG	1 cut(s)	175
BseYI	CCCAGC	1 cut(s)	662
BsgI	GTGCAG	4 cut(s)	114, 144, 358, 1515
BshFI	GGCC	3 cut(s)	444, 1011, 1151
BshNI	GGYRCC	2 cut(s)	26, 838
BshTI	ACCGGT	1 cut(s)	809
BsiHKAI	GWGCWC	2 cut(s)	175, 363
BsiSI	CCGG	3 cut(s)	384, 549, 810
BslFI	GGGAC	7 cut(s)	462, 679, 755, 836, 881, 950, 1164
BslI	CCNNNNNNNGG	5 cut(s)	203, 445, 1298, 1344, 1509
BsmAI	GTCTC	3 cut(s)	105, 691, 944
BsmFI	GGGAC	7 cut(s)	462, 679, 755, 836, 881, 950, 1164
BsmI	GAATGC	2 cut(s)	50, 368
BsnI	GGCC	3 cut(s)	444, 1011, 1151
Bsp119I	TTCGAA	1 cut(s)	1047
Bsp1286I	GDGCHC	2 cut(s)	175, 363
Bsp1407I	TGTACA	2 cut(s)	1204, 1542
Bsp143I	GATC	4 cut(s)	517, 714, 1192, 1301
BspACI	CCGC	2 cut(s)	920, 928
BspANI	GGCC	3 cut(s)	444, 1011, 1151
BspCNI	CTCAG	2 cut(s)	879, 1563
BspLI	GGNNCC	6 cut(s)	28, 76, 450, 840, 1180, 1425
BspMAI	CTGCAG	1 cut(s)	260
BspMI	ACCTGC	1 cut(s)	438
BspPI	GGATC	2 cut(s)	709, 1309
BspT104I	TTCGAA	1 cut(s)	1047
BspT107I	GGYRCC	2 cut(s)	26, 838
BsrDI	GCAATG	1 cut(s)	1152
BsrFI	RCCGGY	1 cut(s)	809
BsrGI	TGTACA	2 cut(s)	1204, 1542
BsrI	ACTGG	5 cut(s)	30, 148, 1424, 1427, 1609
BssAI	RCCGGY	1 cut(s)	809
BssECI	CCNNGG	7 cut(s)	439, 445, 452, 549, 898, 1152, 1452
BssMI	GATC	4 cut(s)	517, 714, 1192, 1301
BssNI	GRCGYC	1 cut(s)	839
BssT1I	CCWWGG	1 cut(s)	1152
Bst2UI	CCWGG	4 cut(s)	446, 453, 681, 900
Bst4CI	ACNGT	3 cut(s)	135, 501, 566
Bst6I	CTCTTC	1 cut(s)	1044
BstACI	GRCGYC	1 cut(s)	839
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstAUI	TGTACA	2 cut(s)	1204, 1542
BstBAI	YACGTR	1 cut(s)	571
BstBI	TTCGAA	1 cut(s)	1047
BstC8I	GCNNGC	2 cut(s)	843, 1009
BstDEI	CTNAG	5 cut(s)	473, 737, 866, 932, 1550
BstDSI	CCRYGG	1 cut(s)	1452
BstENI	CCTNNNNNAGG	1 cut(s)	443
BstF5I	GGATG	3 cut(s)	28, 407, 1116
BstH2I	RGCGCY	2 cut(s)	256, 842
BstHHI	GCGC	3 cut(s)	226, 255, 841
BstKTI	GATC	4 cut(s)	520, 717, 1195, 1304
BstMAI	GTCTC	3 cut(s)	105, 691, 944
BstMBI	GATC	4 cut(s)	517, 714, 1192, 1301
BstMWI	GCNNNNNNNGC	3 cut(s)	279, 647, 656
BstNI	CCWGG	4 cut(s)	446, 453, 681, 900
BstNSI	RCATGY	1 cut(s)	633
BstSCI	CCNGG	5 cut(s)	444, 451, 548, 679, 898
BstSFI	CTRYAG	2 cut(s)	256, 669
BstV2I	GAAGAC	1 cut(s)	394
BstX2I	RGATCY	2 cut(s)	714, 1192
BstXI	CCANNNNNNTGG	2 cut(s)	452, 1147
BstYI	RGATCY	2 cut(s)	714, 1192
BsuI	GTATCC	1 cut(s)	468
BsuRI	GGCC	3 cut(s)	444, 1011, 1151
BtgI	CCRYGG	1 cut(s)	1452
BtsCI	GGATG	3 cut(s)	28, 407, 1116
BtsI	GCAGTG	2 cut(s)	746, 1632
BtsIMutI	CAGTG	5 cut(s)	112, 375, 746, 1602, 1632
BveI	ACCTGC	1 cut(s)	438
Cac8I	GCNNGC	2 cut(s)	843, 1009
CfoI	GCGC	3 cut(s)	226, 255, 841
Cfr10I	RCCGGY	1 cut(s)	809
Cfr13I	GGNCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
CseI	GACGC	2 cut(s)	752, 947
CsiI	ACCWGGT	1 cut(s)	679
Csp6I	GTAC	4 cut(s)	574, 1054, 1205, 1543
CspAI	ACCGGT	1 cut(s)	809
CviAII	CATG	4 cut(s)	82, 414, 630, 834
CviQI	GTAC	4 cut(s)	574, 1054, 1205, 1543
DdeI	CTNAG	5 cut(s)	473, 737, 866, 932, 1550
DinI	GGCGCC	1 cut(s)	840
DpnI	GATC	4 cut(s)	519, 716, 1194, 1303
DpnII	GATC	4 cut(s)	517, 714, 1192, 1301
DraI	TTTAAA	1 cut(s)	823
DriI	GACNNNNNGTC	1 cut(s)	683
EaeI	YGGCCR	2 cut(s)	442, 1149
Eam1104I	CTCTTC	1 cut(s)	1044
Eam1105I	GACNNNNNGTC	1 cut(s)	683
EarI	CTCTTC	1 cut(s)	1044
Eco130I	CCWWGG	1 cut(s)	1152
Eco147I	AGGCCT	1 cut(s)	1011
Eco32I	GATATC	1 cut(s)	1282
Eco47I	GGWCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
Eco47III	AGCGCT	1 cut(s)	254
Eco57I	CTGAAG	1 cut(s)	519
Eco72I	CACGTG	1 cut(s)	571
EcoNI	CCTNNNNNAGG	1 cut(s)	443
EcoO109I	RGGNCCY	2 cut(s)	449, 1178
EcoRI	GAATTC	1 cut(s)	905
EcoRII	CCWGG	4 cut(s)	444, 451, 679, 898
EcoRV	GATATC	1 cut(s)	1282
EcoT14I	CCWWGG	1 cut(s)	1152
EgeI	GGCGCC	1 cut(s)	840
EheI	GGCGCC	1 cut(s)	840
ErhI	CCWWGG	1 cut(s)	1152
FaeI	CATG	4 cut(s)	85, 417, 633, 837
FalI	AAGNNNNNCTT	2 cut(s)	1206, 1238
FaqI	GGGAC	7 cut(s)	462, 679, 755, 836, 881, 950, 1164
FatI	CATG	4 cut(s)	81, 413, 629, 833
FauI	CCCGC	1 cut(s)	913
FauNDI	CATATG	1 cut(s)	1387
FokI	GGATG	3 cut(s)	35, 394, 1103
FspBI	CTAG	5 cut(s)	189, 578, 605, 759, 1614
GlaI	GCGC	3 cut(s)	225, 254, 840
GsaI	CCCAGC	1 cut(s)	666
HaeII	RGCGCY	2 cut(s)	256, 842
HaeIII	GGCC	3 cut(s)	444, 1011, 1151
HapII	CCGG	3 cut(s)	384, 549, 810
HgaI	GACGC	2 cut(s)	752, 947
HhaI	GCGC	3 cut(s)	226, 255, 841
Hin1I	GRCGYC	1 cut(s)	839
Hin1II	CATG	4 cut(s)	85, 417, 633, 837
Hin6I	GCGC	3 cut(s)	224, 253, 839
HinP1I	GCGC	3 cut(s)	224, 253, 839
HincII	GTYRAC	2 cut(s)	35, 1374
HindII	GTYRAC	2 cut(s)	35, 1374
HinfI	GANTC	3 cut(s)	4, 1238, 1583
HpaII	CCGG	3 cut(s)	384, 549, 810
HphI	GGTGA	7 cut(s)	218, 298, 634, 716, 824, 901, 986
Hpy166II	GTNNAC	7 cut(s)	35, 574, 775, 1056, 1374, 1432, 1543
Hpy188I	TCNGA	5 cut(s)	170, 365, 538, 869, 1310
Hpy188III	TCNNGA	1 cut(s)	461
Hpy8I	GTNNAC	7 cut(s)	35, 574, 775, 1056, 1374, 1432, 1543
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	7 cut(s)	187, 214, 502, 602, 613, 1373, 1573
HpyCH4III	ACNGT	3 cut(s)	135, 501, 566
HpyCH4IV	ACGT	1 cut(s)	570
HpyF10VI	GCNNNNNNNGC	3 cut(s)	279, 647, 656
HpyF3I	CTNAG	5 cut(s)	473, 737, 866, 932, 1550
HpySE526I	ACGT	1 cut(s)	570
Hsp92I	GRCGYC	1 cut(s)	839
Hsp92II	CATG	4 cut(s)	85, 417, 633, 837
HspAI	GCGC	3 cut(s)	224, 253, 839
KasI	GGCGCC	1 cut(s)	838
Kzo9I	GATC	4 cut(s)	517, 714, 1192, 1301
LmnI	GCTCC	3 cut(s)	47, 317, 365
LweI	GCATC	2 cut(s)	1392, 1619
MabI	ACCWGGT	1 cut(s)	679
MaeI	CTAG	5 cut(s)	189, 578, 605, 759, 1614
MaeII	ACGT	1 cut(s)	570
MaeIII	GTNAC	5 cut(s)	303, 346, 395, 566, 962
MalI	GATC	4 cut(s)	519, 716, 1194, 1303
MboI	GATC	4 cut(s)	517, 714, 1192, 1301
MboII	GAAGA	4 cut(s)	130, 304, 399, 1061
MfeI	CAATTG	1 cut(s)	846
MflI	RGATCY	2 cut(s)	714, 1192
MhlI	GDGCHC	2 cut(s)	175, 363
MlsI	TGGCCA	1 cut(s)	1151
MluCI	AATT	9 cut(s)	483, 542, 846, 905, 977, 1124, 1133, 1521, 1531
MluNI	TGGCCA	1 cut(s)	1151
Mly113I	GGCGCC	1 cut(s)	839
MlyI	GAGTC	1 cut(s)	1577
MmeI	TCCRAC	1 cut(s)	319
Mox20I	TGGCCA	1 cut(s)	1151
MscI	TGGCCA	1 cut(s)	1151
MseI	TTAA	3 cut(s)	504, 545, 822
MslI	CAYNNNNRTG	2 cut(s)	412, 914
Msp20I	TGGCCA	1 cut(s)	1151
MspA1I	CMGCKG	3 cut(s)	57, 128, 515
MspI	CCGG	3 cut(s)	384, 549, 810
MspR9I	CCNGG	5 cut(s)	446, 453, 550, 681, 900
MssI	GTTTAAAC	1 cut(s)	823
MunI	CAATTG	1 cut(s)	846
Mva1269I	GAATGC	2 cut(s)	50, 368
MvaI	CCWGG	4 cut(s)	446, 453, 681, 900
MwoI	GCNNNNNNNGC	3 cut(s)	279, 647, 656
NarI	GGCGCC	1 cut(s)	839
NciI	CCSGG	1 cut(s)	550
NdeI	CATATG	1 cut(s)	1387
NdeII	GATC	4 cut(s)	517, 714, 1192, 1301
NlaIII	CATG	4 cut(s)	85, 417, 633, 837
NlaIV	GGNNCC	6 cut(s)	28, 76, 450, 840, 1180, 1425
NmeAIII	GCCGAG	1 cut(s)	420
NmuCI	GTSAC	4 cut(s)	303, 346, 395, 566
NspI	RCATGY	1 cut(s)	633
NspV	TTCGAA	1 cut(s)	1047
PceI	AGGCCT	1 cut(s)	1011
PciI	ACATGT	1 cut(s)	629
PctI	GAATGC	2 cut(s)	50, 368
PfeI	GAWTC	1 cut(s)	1238
PflMI	CCANNNNNTGG	4 cut(s)	203, 1298, 1344, 1509
PinAI	ACCGGT	1 cut(s)	809
PleI	GAGTC	1 cut(s)	1577
PluTI	GGCGCC	1 cut(s)	842
PmaCI	CACGTG	1 cut(s)	571
PmeI	GTTTAAAC	1 cut(s)	823
PmlI	CACGTG	1 cut(s)	571
PpsI	GAGTC	1 cut(s)	1577
Ppu21I	YACGTR	1 cut(s)	571
PpuMI	RGGWCCY	2 cut(s)	449, 1178
PscI	ACATGT	1 cut(s)	629
Psp5II	RGGWCCY	2 cut(s)	449, 1178
Psp6I	CCWGG	4 cut(s)	444, 451, 679, 898
PspCI	CACGTG	1 cut(s)	571
PspFI	CCCAGC	1 cut(s)	662
PspGI	CCWGG	4 cut(s)	444, 451, 679, 898
PspN4I	GGNNCC	6 cut(s)	28, 76, 450, 840, 1180, 1425
PspPI	GGNCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
PspPPI	RGGWCCY	2 cut(s)	449, 1178
PstI	CTGCAG	1 cut(s)	260
PsuI	RGATCY	2 cut(s)	714, 1192
PvuII	CAGCTG	3 cut(s)	57, 128, 515
RsaI	GTAC	4 cut(s)	575, 1055, 1206, 1544
RsaNI	GTAC	4 cut(s)	574, 1054, 1205, 1543
RseI	CAYNNNNRTG	2 cut(s)	412, 914
SaqAI	TTAA	3 cut(s)	504, 545, 822
Sau3AI	GATC	4 cut(s)	517, 714, 1192, 1301
Sau96I	GGNCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
SchI	GAGTC	1 cut(s)	1577
ScrFI	CCNGG	5 cut(s)	446, 453, 550, 681, 900
SduI	GDGCHC	2 cut(s)	175, 363
SexAI	ACCWGGT	1 cut(s)	679
SfaNI	GCATC	2 cut(s)	1392, 1619
SfcI	CTRYAG	2 cut(s)	256, 669
SfoI	GGCGCC	1 cut(s)	840
SfuI	TTCGAA	1 cut(s)	1047
SgrAI	CRCCGGYG	1 cut(s)	809
SinI	GGWCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
SmiMI	CAYNNNNRTG	2 cut(s)	412, 914
Sse9I	AATT	9 cut(s)	483, 542, 846, 905, 977, 1124, 1133, 1521, 1531
SseBI	AGGCCT	1 cut(s)	1011
SsiI	CCGC	2 cut(s)	920, 928
SspDI	GGCGCC	1 cut(s)	838
SspMI	CTAG	5 cut(s)	189, 578, 605, 759, 1614
StuI	AGGCCT	1 cut(s)	1011
StyD4I	CCNGG	5 cut(s)	444, 451, 548, 679, 898
StyI	CCWWGG	1 cut(s)	1152
TaaI	ACNGT	3 cut(s)	135, 501, 566
TaiI	ACGT	1 cut(s)	573
TaqI	TCGA	3 cut(s)	141, 1047, 1212
TasI	AATT	9 cut(s)	483, 542, 846, 905, 977, 1124, 1133, 1521, 1531
TatI	WGTACW	3 cut(s)	1053, 1204, 1542
TauI	GCSGC	1 cut(s)	931
TfiI	GAWTC	1 cut(s)	1238
Tru1I	TTAA	3 cut(s)	504, 545, 822
Tru9I	TTAA	3 cut(s)	504, 545, 822
TscAI	CASTG	5 cut(s)	112, 382, 753, 1609, 1632
TseFI	GTSAC	4 cut(s)	303, 346, 395, 566
Tsp45I	GTSAC	4 cut(s)	303, 346, 395, 566
TspDTI	ATGAA	4 cut(s)	480, 999, 1286, 1554
TspGWI	ACGGA	3 cut(s)	87, 602, 1441
TspRI	CASTG	5 cut(s)	112, 382, 753, 1609, 1632
Van91I	CCANNNNNTGG	4 cut(s)	203, 1298, 1344, 1509
VpaK11BI	GGWCC	6 cut(s)	145, 449, 677, 1094, 1178, 1226
XagI	CCTNNNNNAGG	1 cut(s)	443
XapI	RAATTY	4 cut(s)	905, 977, 1124, 1531
XceI	RCATGY	1 cut(s)	633
XcmI	CCANNNNNNNNNTGG	1 cut(s)	335
XspI	CTAG	5 cut(s)	189, 578, 605, 759, 1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.